|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-333 |
1.45e-162 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 457.75 E-value: 1.45e-162
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 1 MNPHTKLISSLSLVLGTTITISSTHWVMAWAGLELNTLAIIPFISKSHHPRAIEATIKYFLVQATASTLLLFSSMTNAWS 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 81 TGQWDIAQLTHPTSSLLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKFPPTVLLLLTAHSLNPTLLTTLAIT 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 161 SVALGGWMGLNQTQLRKILAFSSIAHLGWMTAVILYNPKLALLTFYLYVLTTSTVFLTLNSTKTLKLTTLMTSWTKSPSL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 241 NATLMLVLLSLAGLPPLTGFLPKWLITQELTKQEMATTATLLAILSLLGLFFYLRLAYHSTITLPPNSTNYMKHWHFTKP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330
....*....|...
gi 182895099 321 TNASAAILATLST 333
Cdd:MTH00112 321 KNTLTATLTTLST 333
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-333 |
2.41e-130 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 376.07 E-value: 2.41e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 1 MNPHTKLISSLSLVLGTTITISSTHWVMAWAGLELNTLAIIPFISKSHHPRAIEATIKYFLVQATASTLLLFSSMTNAWS 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 81 TGQWDIAQLTHPTSSLLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKFPPTVLLLLTAHSlNPTLLTTLAIT 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 161 SVALGGWMGLNQTQLRKILAFSSIAHLGWMTAVILYNPKLALLTFYLYVLTTSTVFLTLNSTKTLKLTTLMTSWTKSPSL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 241 NATLMLVLLSLAGLPPLTGFLPKWLITQELTKQEMATTATLLAILSLLGLFFYLRLAYHSTITLPPNSTNYMKHWHFtkP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRL--P 317
|
330
....*....|...
gi 182895099 321 TNASAAILATLST 333
Cdd:MTH00135 318 STQLTLPLAISTT 330
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-333 |
1.05e-128 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 371.95 E-value: 1.05e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 1 MNPHTKLISSLSLVLGTTITISSTHWVMAWAGLELNTLAIIPFISKSHHPRAIEATIKYFLVQATASTLLLFSSMTNAWS 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 81 TGQWDIAQLTHPTSSLLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKFPPTVLLLLTAHSLNPTLLTTLAIT 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 161 SVALGGWMGLNQTQLRKILAFSSIAHLGWMTAVILYNPKLALLTFYLYVLTTSTVFLTLNSTKTLKLTTLMTSWTKSPSL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 241 NATLMLVLLSLAGLPPLTGFLPKWLITQELTKQEMATTATLLAILSLLGLFFYLRLAYHSTITLPPNSTNYMKHWHFTKP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330
....*....|...
gi 182895099 321 TNASAAILATLST 333
Cdd:MTH00070 321 TNNLLSLTIILSL 333
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-333 |
3.88e-116 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 339.90 E-value: 3.88e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 1 MNPHTKLISSLSLVLGTTITISSTHWVMAWAGLELNTLAIIPFISKSHHPRAIEATIKYFLVQATASTLLLFSSMTNAWS 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 81 TGQWDIAQLTHPTSSLLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKFPPTVLLLLTAHSLNPTLLTTLAIT 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 161 SVALGGWMGLNQTQLRKILAFSSIAHLGWMTAVILYNPKLALLTFYLYVLTTSTVFLTLNSTKTLKLTTLMTSWTKSPSL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 241 NATLMLVLLSLAGLPPLTGFLPKWLITQELTKQEMATTATLLAILSLLGLFFYLRLAYHSTITLPPnSTNYMK-HWHF-- 317
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFP-STNNMKmKWQFen 319
|
330
....*....|....*.
gi 182895099 318 TKPTNaSAAILATLST 333
Cdd:MTH00105 320 TKPMT-LLPTLIILST 334
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-333 |
5.91e-99 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 296.11 E-value: 5.91e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 1 MNPHTKLISSLSLVLGTTITISSTHWVMAWAGLELNTLAIIPFISKSHHPRAIEATIKYFLVQATASTLLLFSSMTNAWS 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 81 TGQWDIAQLTHPTSSLLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKFPPTVLLLLTAHSLNPTLLTTLAIT 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 161 SVALGGWMGLNQTQLRKILAFSSIAHLGWMTAVILYNPKLALLTFYLYVLTTSTVFLTLNSTKTLKLTTLMTSWTKSPSL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 241 NATLMLVLLSLAGLPPLTGFLPKWLITQELTKQEMATTATLLAILSLLGLFFYLRLAYHSTITLPPNSTNYMKHWHFTKP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330
....*....|...
gi 182895099 321 TNASAAILATLST 333
Cdd:MTH00200 321 SNLLVGLLLLLSI 333
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-333 |
3.08e-89 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 271.42 E-value: 3.08e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 1 MNPHTKLISSLSLVLGTTITISSTHWVMAWAGLELNTLAIIPFISKSHHPRAIEATIKYFLVQATASTLLLFSSMTNAWS 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 81 TGQWDIAQLTHPTSSLLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKFPPTVLLLLTAHSLNPTLLTTLAIT 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 161 SVALGGWMGLNQTQLRKILAFSSIAHLGWMTAVILYNPKLALLTFYLYVLTTSTVFLTLNSTKTLKLTTLMTSWTKSPSL 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 241 NATLMLVLLSLAGLPPLTGFLPKWLITQELTKQEMATTATLLAILSLLGLFFYLRLAYHSTITLPPNSTNYMKHWHFTKP 320
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGN 320
|
330
....*....|...
gi 182895099 321 TNASAAILATLST 333
Cdd:MTH00041 321 ITVYGVILSILSS 333
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-316 |
3.40e-66 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 211.99 E-value: 3.40e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 1 MNPHTKLISSLSLVLGTTITISSTHWVMAWAGLELNTLAIIPFISKSHHPRAIEATIKYFLVQATASTLLLFSSMTNAWS 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 81 TGqwdiaqLTHPTSSLLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKFPPTVLLLLTahsLNPTLLTTLAIT 160
Cdd:MTH00160 82 LM------LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 161 SVALGGWMGLNQTQLRKILAFSSIAHLGWMTAVILYNPKLALLTFYLYVLTTSTVFLTLNSTKTLKLTTLMTSWTKSPSL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 182895099 241 NATLMLVLLSLAGLPPLTGFLPKWLITQELTKQEMATTATLLAILSLLGLFFYLRLAYhSTITLPPNSTNYMKHWH 316
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISY-SSLMLNYNKNKWNLKKK 307
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
13-302 |
2.29e-52 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 175.84 E-value: 2.29e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 13 LVLGTTITISSTHWVMAWAGLELNTLAIIPFISKSHHPRAIEATIKYFLVQATASTLLLFSSMTNAWSTGQWDiaqlthp 92
Cdd:MTH00144 13 MVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWF------- 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 93 tSSLLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKFPPTVLLLLTAHSLNP-TLLTTLAITSVALGGWMGLN 171
Cdd:MTH00144 86 -SMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVISVLSALVGSIGGLN 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 172 QTQLRKILAFSSIAHLGWMTAVILYNPKLALLTFYLYVLTTSTVFLTLnSTKTLKLTTLMTSWTKSPSLNATLMLVLLSL 251
Cdd:MTH00144 165 QTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSL-WSGDSGSMKDLGSLKPSYKTGLSIISLLLSL 243
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 182895099 252 AGLPPLTGFLPKWLITQELTKQEMATTATLLAILSLLGLFFYLRLAYHSTI 302
Cdd:MTH00144 244 GGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL 294
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-310 |
2.58e-49 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 168.03 E-value: 2.58e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 1 MNPHTKLISSlSLVLGTTITISSTHWVMAWAGLELNTLAIIPFISKSHHPRAIEATIKYFLVQATASTLLLFSSmtnaws 80
Cdd:MTH00011 4 TFPTMFLFSS-TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------ 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 81 TGQWDIAQLTHPTSSLLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKFPPTVLLLLTAHSLNPTLLTTLAIT 160
Cdd:MTH00011 77 TMMWSFPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAM 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 161 SVALGGWMGLNQTQLRKILAFSSIAHLGWMTAVILYNPKLALLTFYLYVLTTSTVFLTLNSTKTLKLTTLMTSWTKSPSL 240
Cdd:MTH00011 157 SALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTT 236
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 241 NATLMLVLLSLAGLPPLTGFLPKWLITQELTKQEMATTATLLAILSLLGLFFYLRLAYhSTITLPPNSTN 310
Cdd:MTH00011 237 SMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSS 305
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
10-302 |
2.75e-41 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 146.74 E-value: 2.75e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 10 SLSLVLGTTITISSTHWVMAWAGLELNTLAIIPFISKSHHPRAIEATIKYFLVQATASTLLLFSSMTNAWSTgqwdiaqL 89
Cdd:MTH00197 4 LFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL-------Y 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 90 THPTSSLLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKFPPtvLLLLTAHSLNPTLLTTLAITSVALGGWMG 169
Cdd:MTH00197 77 LSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGGIGG 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 170 LNQTQLRKILAFSSIAHLGWMTAVILYNPKLALLTFYLYVLTTSTVFLTLNSTKTLKLTTlMTSWTKSPSLN-ATLMLVL 248
Cdd:MTH00197 155 MNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQ-QYSNPESMSSNlVFLGLSF 233
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 182895099 249 LSLAGLPPLTGFLPKWLITQELTKQEMATTATLLAILSLLGLFFYLRLAYHSTI 302
Cdd:MTH00197 234 LSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLI 287
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-266 |
1.32e-30 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 120.99 E-value: 1.32e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 14 VLGTTITISSTHWVMAWAGLELNTLAIIPFIS-KSHHPRAIEATIKYFLVQATASTLLLF-SSMTNAwSTGQWDIAQL-- 89
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYG-ATGSLNLAGIaa 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 90 ---THPTSSLLLTVAIAM-------KLGLVPFHFWFPEVLQGSSLTTALLLSTMMK---FPPTVLLLLTA-HSLNP---T 152
Cdd:COG1007 191 alaAGGANSPLLLLGLVLvlaglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAALLRLLVEAfPGLAAdwqL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 153 LLTTLAITSVALGGWMGLNQTQLRKILAFSSIAHLGWMTAVILYNPKLAL--LTFYL--YVLTTSTVFLTLNS-TKTLKL 227
Cdd:COG1007 271 LLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNLGAFAVILLlSRKGGE 350
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 182895099 228 TTLMTSW----TKSPSLNATLMLVLLSLAGLPPLTGFLPKWLI 266
Cdd:COG1007 351 AEEIEDLaglaRRSPLLALAMTIFLLSLAGIPPTAGFFGKFYV 393
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
1.08e-28 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 113.97 E-value: 1.08e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 13 LVLGTTITISSTHWVMAWAGLELNTLAIIPFI-SKSHHPRAIEATIKYFLVQATASTLLLFSSMTNAWSTGQWDI----- 86
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLsyinl 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 87 --------AQLTHPTSSLLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKFppTVLLLLTAHSLNPTLLTTLA 158
Cdd:MTH00196 82 vlnsgqsfSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKL--GIFSILVSIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 159 ITSVALGGWMGLNQTQLRKILAFSSIAHLGWMTAVILYNP----KLALLTFYLYVLTTSTVF---LTLNSTKTLkLTTLM 231
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFsiiLALNVYKNL-IIEFS 238
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 182895099 232 TSWTKSPSLNATLMLVLLSLAGLPPLTGFLPKWLITQELTKQEMATTATLLAILSLLGLFFYLRL 296
Cdd:MTH00196 239 GLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
11-266 |
5.04e-28 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 113.57 E-value: 5.04e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 11 LSLVLGTTITISSTHWVMAWAGLELNTLAIIPFIS-KSHHPRAIEATIKYFLVQATASTLLLFSSMTNAWSTGQWDI--- 86
Cdd:MTH00199 104 LIVALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqgi 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 87 -AQLTHPTSSLLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKFPPTVLLLLTAHSLNPTLLTtlAITSVALG 165
Cdd:MTH00199 184 nSILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSIIYG 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 166 GWMGLNQTQLRKILAFSSIAHLGWMTAVILYNP----KLALLTFYLYVLTTSTVF---LTLNSTKTLkLTTLMTSWTKSP 238
Cdd:MTH00199 262 AIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSfesiQASLIYMIIYVIMSICSFsiiLSLKLTKGL-IVEVSGLSRKNP 340
|
250 260
....*....|....*....|....*...
gi 182895099 239 SLNATLMLVLLSLAGLPPLTGFLPKWLI 266
Cdd:MTH00199 341 VIALTLALTFLSIAGIPPLAGFLSKWLI 368
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
1.28e-27 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 112.61 E-value: 1.28e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 14 VLGTTITISSTHWVMAWAGLELNTLAIIPFIS-KSHHPRAIEATIKYFLVQATASTLLLFSSMTNAWSTGQWDIAQLTHP 92
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 93 TSS------------LLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMK---FPPTVLLLLTA-HSLNPT---L 153
Cdd:PRK05777 193 LADgsgnsllllfglVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAVLLRLLVVAfGGLSEDwqqV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 154 LTTLAITSVALGGWMGLNQTQLRKILAFSSIAHLGWMTAVILYNPKLAL--LTFYL--YVLTT--STVFLTLNSTKTLKL 227
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYLlaYLFMTlgAFGVISLLRRKGGEA 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 182895099 228 TTLmTSWT----KSPSLNATLMLVLLSLAGLPPLTGFLPKWLITQELTKQEMATTATLLAILSLLGLFFYLRL 296
Cdd:PRK05777 353 ESI-SDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-266 |
4.05e-27 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 108.17 E-value: 4.05e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 23 STHWVMAWAGLELNTLAIIPFI-SKSHHPRAIEATIKYFLVQATASTLLLFSSMTNAWSTGQWDIAQL-----------T 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 91 HPTSSLLLTVAIAMKLGLVPFHFWFPEVLQGSSLT-TALLLSTMMKFPPTVLL--LLTAHSLNPT---LLTTLAITSVAL 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPvSALLAATLVKAGGYGLIrrSLLYLPSSPFiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 165 GGWMGLNQTQLRKILAFSSIAHLGWMTAVIL----YNPKLALLTFYLYVLTTSTVFLTLNS-----TKTLKLTTLMTSWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGagtiYGIQAAIFHLLTHGLFSAGLFLCAGSviyrrVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|.
gi 182895099 236 KSPSLNATLMLVLLSLAGLPPLTGFLPKWLI 266
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLI 271
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-297 |
1.84e-23 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 100.79 E-value: 1.84e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 14 VLGTTITISSTHWVMAWAGLELNTLAIIPFIS-KSHHPRAIEATIKYFLVQATASTLLLFSSMTNAWSTGQWDIAQLTHP 92
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 93 TSS------------LLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMK-------FPPTVLLLLTAHSLNPTL 153
Cdd:TIGR01770 192 LSNgmlnisllllgiVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKiaifavfLRLFLYILFGFSEAWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 154 LTTLAITSVALGGWMGLNQTQLRKILAFSSIAHLGWMTAVILYNPK--LALLTFYL--YVLTTSTVFLTLNSTKTLK--- 226
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLegIKAVLFYIfiYALMSLGAFGVLSLLRSYKdew 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 182895099 227 ---LTTLMTSWTKSPSLNATLMLVLLSLAGLPPLTGFLPKWLITQELTKQEMATTATLLAILSLLGLFFYLRLA 297
Cdd:TIGR01770 352 ieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-266 |
6.85e-22 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 96.47 E-value: 6.85e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 15 LGTTITISSTHWVMAWAGLELNTLAIIPFISKSHHPRAI---------EATIKYFLVQATASTLLLFSSMTNAWSTGQ-- 83
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNeg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 84 --WDIAQLTHPTSS----------LLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKFppTVLLLLTAHSLNP 151
Cdd:MTH00198 279 mlGTILSATLETTNielrqgslgyLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 152 TLLTTLAITSVALGGWMGLNQTQLRKILAFSSIAHLGWM-------TAVILYNPKLALLTFYLYVLTTSTVFLTL----- 219
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFIligvsagTYESLQASWTYAVTYLVSALASFTVICTLeefgt 436
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 220 -------------NSTKTLKLTTLMTSWTKSPSLNATLMLVLLSLAGLPPLTGFLPKWLI 266
Cdd:MTH00198 437 rtptsrqrdgsfgNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFI 496
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
30-268 |
6.94e-21 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 92.90 E-value: 6.94e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 30 WAGLELNTLAIIPFISKSHHPRAIEATIKYFLVQATASTLLLFSSMTNAWSTGQWDIAQLTHPTSSL----------LLT 99
Cdd:COG0651 133 FVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELdpglllaafaLLL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 100 VAIAMKLGLVPFHFWFPEVL-QGSSLTTALLLSTMMKFPP-----TVLLLLTAHSLNP--TLLTTLAITSVALGGWMGLN 171
Cdd:COG0651 213 VGFGIKAALFPLHFWLPDAYpAAPSPVSALLSGLLTKVGVyailrVLTLLFGADPALFlgTLLLVLGLLTMLVGALGALA 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 172 QTQLRKILAFSSIAHLGWMTAVILYNPKLALLTFYLYV----LTTSTVFLT----LNSTKTLKLTTLMTSWTKSPSLNAT 243
Cdd:COG0651 293 QRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLlnhaLAKALLFLAagaiERATGTRDLDKLGGLGKRMPLTAAA 372
|
250 260
....*....|....*....|....*
gi 182895099 244 LMLVLLSLAGLPPLTGFLPKWLITQ 268
Cdd:COG0651 373 FLIGALALAGLPPLSGFVSKWLLLQ 397
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
11-263 |
1.86e-17 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 83.18 E-value: 1.86e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 11 LSLVLGTTITISSTHWVMAWAGLElnTLAIIPFISKSH---HPRAIEATIKYFLVQATASTLLLF-SSMTNAWSTGQW-- 84
Cdd:PRK02504 117 LTATLGGMFLSGATELVMIFISLE--TLSIASYLLTGYmkrDPRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGSTql 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 85 -DIAQLTHPTSSLLLTVA-------IAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMK---FPPTVLLLLTAHSLNPT- 152
Cdd:PRK02504 195 sAIALALITSPSLGLALAlvfviagIAFKISAVPFHQWTPDVYEGSPTPVVAFLSVGSKaagFALAIRLLVTAFPSFDEq 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 153 ---LLTTLAITSVALGGWMGLNQTQLRKILAFSSIAHLGWMTA--VILYNPKLALLTFYLYVLttstVFLTLNSTKTLKL 227
Cdd:PRK02504 275 wklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIglVAGTEAGYASMVFYLLAY----LFMNLGAFACVIL 350
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 182895099 228 TTLMTS----------WTKSPSLNATLMLVLLSLAGLPPLTGFLPK 263
Cdd:PRK02504 351 FSLRTGtdqisdyaglYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-263 |
1.11e-16 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 80.82 E-value: 1.11e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 51 RAIEATIKYFLVQATASTLLLFS-SMTNAWSTGQ---WDIA------QLTHPTSSLL----LTVAIAMKLGLVPFHFWFP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYGfSWLYGLSGGEielQEIVnglintQMYNSPGISIalifITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 117 EVLQGSSLTTALLLSTMMKFPPTVLLLLTAHSLNPT-------LLTTLAITSVALGGWMGLNQTQLRKILAFSSIAHLGW 189
Cdd:CHL00049 239 DVYEGSPTPVVAFLSVTSKVAASALATRIFDIPFYFssnewhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGY 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 190 -MTAVILYNPKLALLTFYLYVLTtsTVFLTLNSTKTLKLTTLMT----------SWTKSPSLNATLMLVLLSLAGLPPLT 258
Cdd:CHL00049 319 vIIGIIVGDSNDGYASMITYMLF--YIFMNLGTFACIVLFGLRTgtdnirdyagLYTKDPFLALSLALCLLSLGGIPPLA 396
|
....*
gi 182895099 259 GFLPK 263
Cdd:CHL00049 397 GFFGK 401
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-266 |
3.88e-12 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 67.03 E-value: 3.88e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 49 HPRAIEATIKYFLVQATASTLLLFSSMTNAWSTGQW--DIAQLTHPTSS--------LLLTVAIAMKLGLVPFHFWFPEV 118
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAAPLPltaqlllfLAFFIAFAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 119 L-QGSSLTTALLLSTMMK----------FPptvLLLLTAHSLNPTLLTtLAITSVALGGWMGLNQTQLRKILAFSSIAHL 187
Cdd:COG1008 236 HvEAPTAGSVLLAGVLLKmggygllrfaLP---LFPEASAYFAPLLAA-LGVIGIIYGALVALAQTDLKRLIAYSSVSHM 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 188 GWMTavilynpkLALLTF---------YLYV---LTTSTVFLTL----NSTKTLKLTTLMTSWTKSPSLNATLMLVLLSL 251
Cdd:COG1008 312 GFVL--------LGIFALnplglqgavLQMVshgLITAALFLLVgvlyDRTHTRDIADLGGLAKRMPVLAALFLLAALAS 383
|
250
....*....|....*
gi 182895099 252 AGLPPLTGFLPKWLI 266
Cdd:COG1008 384 LGLPGTSGFVGEFLV 398
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-266 |
9.49e-11 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 62.65 E-value: 9.49e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 50 PRAIEATIKYFLVQATASTLLLFS----SMTNAWSTGQWDIAQLTHPTSS-----LLLTVAIAMKLGLVPFHFWFPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAilglYFLGGGTFDLLELLNLPLPFGVqtwlfLAFFIAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 120 QGSSLTTALLLSTMMKFPPTVLLLLT------AHSLNPTLLTTLAITSVALGGWMGLNQTQLRKILAFSSIAHLGWMTAV 193
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFLRFNlplfpdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLG 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 194 ILYNPKLALLTFYLYV----LTTSTVFLTL----NSTKTLKLTTLMTSWTKSPSLNATLMLVLLSLAGLPPLTGFLPKWL 265
Cdd:TIGR01972 312 IFSFNELGISGAVFQMishgLITAALFLLVgvlyERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFL 391
|
.
gi 182895099 266 I 266
Cdd:TIGR01972 392 I 392
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
80-263 |
7.90e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 60.32 E-value: 7.90e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 80 STGQWDIAQL-THPTSSLLLTVAIAM-------KLGLVPFHFWFPEVLQGSSLTTALLLSTMM---------KFPPTVLL 142
Cdd:PRK12644 183 AAGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPGFAD 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 143 LLTAHslnPTLLTtLAITSVALGGWMGLNQTQLRKILAFSSIAHLGWMTAVILY---NPKLALLTFYL-YVLTTSTVFLT 218
Cdd:PRK12644 263 VPVWR---PTVLV-LGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIgtrDAALAGLAMLLaHALFKAALFLV 338
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 182895099 219 L----NSTKTLKLTTLMTSWTKSPSLNATLMLVLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 339 VgiidHSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
1.66e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 58.74 E-value: 1.66e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 33 LELNTLAIIPFISKSHHPRAIEATIKYFLVQATASTLLLFS-SMTNAwSTGQWDIAQLTH--PTSSLLLT------VAIA 103
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGvGLLYG-VTGTLNMADLAGalAENPTVVTafgfvlLALA 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 104 MKLGLVPFHFWFPEVLQG-SSLTTALLLSTMMKFPPTVLLLLTAHSLNP---------TLLTTLAITSVALGGWMGLNQT 173
Cdd:PRK08375 214 LKAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAVYALIRIYFTVFGGdfrfalglgWLLAVLALLSMLVGSLAALGQD 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 174 QLRKILAFSSIAHLGWMTAVILYNPKLALL--TFYL--YVLTTSTVFLTLNS----TKTLKLTTLMTSWTKSPSLNATLM 245
Cdd:PRK08375 294 DVKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLAAGAievtYGTRRLSELSGLGRRMPLTAAAFA 373
|
250 260
....*....|....*....|.
gi 182895099 246 LVLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08375 374 VASLSLIGVPPTSGFVSKWYL 394
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
109-266 |
1.67e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 59.16 E-value: 1.67e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 109 VPFHFWFPEVLQGSSLTTALLLS-TMMKfpPTVLLLLtahSLNP----------TLLTTLAITSVAlGGWMGLNQTQLRK 177
Cdd:PRK12647 212 FPFHFWLPNAMEAPTPVSAYLHSaTMVK--AGIYLLA---RLNPvlggtplwqtILPLFGGLTMLT-GALLAVRQTDLKL 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 178 ILAFSSIAHLGWMTAVILYNPKLALLTFYLYVLTTS----TVFLTL----NSTKTLKLTTLMTSWTKSPSLNATLMLVLL 249
Cdd:PRK12647 286 ILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSlykgALFMVAgiidHETGTRDITKLGGLRRAMPITAAAALLAAL 365
|
170
....*....|....*..
gi 182895099 250 SLAGLPPLTGFLPKWLI 266
Cdd:PRK12647 366 SMAGLPPLFGFLAKELI 382
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
2.60e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 58.18 E-value: 2.60e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 33 LELNTLAIIPFIS-KSHHPRAIEATIKYFLVQATASTLLLFSSmtnAWSTGQWD------IAQLTHPTSSL-------LL 98
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGI---ALLYGQYGtlnmayLAVKMSENPTVvakialaLF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 99 TVAIAMKLGLVPFHFWFPEVLQG--SSLTTALLLSTMMKFPPT--VLLLLTAHSLNPT----LLTTLAITSVALGGWMGL 170
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYPAapSSISAMLLVIKQAGLYALarVLFSIYGPAINLAtvgwVIIILGCLTMFVGVAMAV 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 171 NQTQLRKILAFSSIAHLGWM------TAVILYNPKL----------ALLTFYLYVLTTSTVFLT----LNSTKTLKLTTL 230
Cdd:PRK08376 307 VQKDVKRLLAYHSVSQIGYMllglgvGLAALGDPAMasygeialagGIYHIVNHALYKALLFLTagavIYETGTRNLNEL 386
|
250 260 270
....*....|....*....|....*....|....*.
gi 182895099 231 MTSWTKSPSLNATLMLVLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 387 GGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
20-266 |
7.87e-09 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 56.86 E-value: 7.87e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 20 TISSTHWVMAWAGLELNTLAIIPFISKSHHPRAIEATIKYFLV------QATASTLLLFSS----MTNAWSTGQW-DIAQ 88
Cdd:PRK06458 124 ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIIcsvgvaFALFGTILVYANaatvMGDGEMAILWtELLK 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 89 LTHPTSSLLLTVAIAM-------KLGLVPFHFWFPE-----------VLQGSSLTTALLLSTMMKfpptVLLLLTAHSLN 150
Cdd:PRK06458 204 HASLLDPTLMKLAFVFlligfgtKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALYAVLRYY----ILIDAAIGSDF 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 151 P-TLLTTLAITSVALGGWMGLNQTQLRKILAFSSIAHLGWMTAVILYNPKLA----LLTFYLYVLTTSTVFLT----LNS 221
Cdd:PRK06458 280 PgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGifaaLLHMLNHSLTKSAIFFAsgnvLQK 359
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 182895099 222 TKTLKLTTLMTSWTKSPSLNATLMLVLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK06458 360 YGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLI 404
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
30-279 |
1.52e-08 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 56.16 E-value: 1.52e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 30 WAGLELNTLAIIPFISKshhpRAIEATIKYFLVQATASTLLLFSSMTNAWSTGQWDIA-------QLTHPTSS----LLL 98
Cdd:PRK08668 127 WEIMTFSSFMMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFAdisqgliNDTSTGFAlivfLFL 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 99 TVAIAMKLGLVPFHFWFPE-----------VLQG--SSLTTALLLSTMMKFPPTVLLL----LTAHSLNPTLLTTLAITS 161
Cdd:PRK08668 203 LAFGVAKAGIFPLHVWAPDayseapqsfsaVLSGqlSKLGAYGFLLVLYVLPGTKLFSefgtYRGVPLFNYILAWLGNIS 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 162 VALGGWMGLNQTQLRKILAFSSIAHLGW-MTAVILYNP---KLALLTFYLYVLTTSTVFLTLNS----TKTLKLTTLMTS 233
Cdd:PRK08668 283 IIVGTLMAILQEDIKKLIAYSSVANGGYiLVGLGLGTSlgfAGGLFHVFNHALFKGLFFLIFAAviyrTGTTKISEMGGL 362
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 182895099 234 WTKSPSLNATLMLVLLSLAGLPPLTGFLPKWLITQELTKQEMATTA 279
Cdd:PRK08668 363 IEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITA 408
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
53-268 |
8.04e-08 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 53.80 E-value: 8.04e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 53 IEATIKYFLVQATASTLLLFSSMTNAWSTGQWDIAQL-----------THPTSSLLLTVAIAMKLGLVPFhFWFPEVLQG 121
Cdd:PRK12663 157 LRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIamrlndmgdtaTLTTIALLFLLAFGMKAALFPF-MWLPAAYHT 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 122 SSLTTALLLSTMMK-------FPPTVLLLLTAHSLNPTLLTTLAITSVALGGWMGLNQTQLRKILAFSSIAHLGWMTAVI 194
Cdd:PRK12663 236 PNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGL 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 195 LYNPKLAL--LTFYLY--VLTTSTVFLTLNSTKTL----KLTTLMTSWTKSPSLNATLMLVLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK12663 316 ALGTPAGIngAIFYLVhdMVVKTALFLIAGSLVRLtgyrSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLL 395
|
..
gi 182895099 267 TQ 268
Cdd:PRK12663 396 VQ 397
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
29-263 |
8.39e-08 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 53.89 E-value: 8.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 29 AWaglELNTLAIIPFISKSHhPRAIEATIKYFLVQATASTLLLFSSMTNAWSTGQWDIAQLTHPTS-----------SLL 97
Cdd:PRK12650 138 AW---ELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVwaekpglttvvAVL 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 98 LTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKFPPTVLLLL--TAHSLNPT---LLTTLAITSVALGGWMGLNQ 172
Cdd:PRK12650 214 IAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRfsPVFHDVAVwnwLLIIVGMITALMGAVFAVQK 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 173 TQLRKILAFSSIAHLGWMTAVILYNPKLALLTFYLYVLT----TSTVFLTL----NSTKTLKLTTLMTSWTKSPSLNATL 244
Cdd:PRK12650 294 TDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAhalfKSSLFMLIgvvdHQAGTRDIRRLGSLWRRMPFTFVSV 373
|
250
....*....|....*....
gi 182895099 245 MLVLLSLAGLPPLTGFLPK 263
Cdd:PRK12650 374 TIAALSMAAVPPLFGFVSK 392
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-266 |
1.78e-07 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 52.85 E-value: 1.78e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 48 HHPRAIEATIKYFLVQATASTLLLFSSMTNAWSTGQWDI----AQLTHPTSSLLLTVAIAM-------KLGLVPFHFWFP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFsellAAAPTILSSPLLTLILLLlllgafgKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 117 EVLQGSSLTTALLLS-TMMKFPPTVLLLLT-AHSLNPTLLTTLAITSVA---LGGWMGLNQTQLRKILAFSSIAHLGWMT 191
Cdd:COG1009 236 DAMEGPTPVSALLHAaTMVKAGVYLLARLSpLFALSPVWLTVVAIIGAItalFAALIALAQTDIKRVLAYSTVSQLGYMF 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 192 AVI-LYNPKLALLTFYLYVLTTSTVFLT----LNSTKTLKLTTLMTSWTKSPSLNATLMLVLLSLAGLPPLTGFLPKWLI 266
Cdd:COG1009 316 LALgVGAYVAALFHLLTHAFFKALLFLGagsvIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAI 395
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-219 |
2.52e-07 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 52.06 E-value: 2.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 13 LVLGTTITISSTHWVMAWAGLELNTLAIIPFISKSHHPRAIEATIKYFLVQATA------STLLLFSSMTNAWSTG--QW 84
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGtlNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 85 D----IAQLTHPT----SSLLLTVAIAMKLGLVPFHFWFPEV-LQGSSLTTALLLSTMMKFPPTVLLLLTA-------HS 148
Cdd:PRK08676 191 TelaaHASLLSPSvlgaSFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaAE 270
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 182895099 149 LNPTLLTTLAITSVALGGWMGLNQTQLRKILAFSSIAHLGWMTAVILYNPKLALLTFYLYVLTTSTVFLTL 219
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGL 341
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
3.40e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 51.66 E-value: 3.40e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 33 LELNTLAIIPFISKSHHPRAIEATIKYFLVQATASTLLLFS-----SMTNAWSTGqwDIAQLTHP--------TSSLLLT 99
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGigflyAITGTLNMG--DMFLIIQDlptnraiqIGVLFIM 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 100 VAIAMKLGLVPFHFWFPEVLQG---------SSLTTALLLSTMMKFPPTVL---LLLTAHSLNpTLLTTLAITSVALGGW 167
Cdd:PRK12662 217 VGLFIKAALFPFHKWLIQAYSEapsfisvffSGTSTKVMIYLIIRIVYDVFkanFVFTTLPFN-NVFMILAALAIVFGSV 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 168 MGLNQTQLRKILAFSSIAHLGWMTAVILYNPKLALLTFYLYVLTTSTV----FLTLNSTK----TLKLTTLMTSWTKSPS 239
Cdd:PRK12662 296 LAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVksalFMVSGSISyhfgTTKLEDCLNLWKSMPK 375
|
250 260
....*....|....*....|....*..
gi 182895099 240 LNATLMLVLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK12662 376 ITLAFVLLSLSLIGMPPTSGFVAKWYI 402
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
59-270 |
9.76e-07 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 50.50 E-value: 9.76e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 59 YFLVQATASTLLLFSSMTNAW-STGQWDIAQLTHPTSS-----LLLTVAIAMKLGLVPFHFWFPEVLQGS-SLTTALLLS 131
Cdd:PRK08667 166 FYFVMTQLSTVFLMLGIIVLFiQTGSFELSPLGASAGIlslvfLLLFLGFGIKAGIIPFHKWLPYAHPASpSNVSALMSG 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 132 TMMKFPPTVLLLLTAHSLNP-----TLLTTLAITSVALGGWMGLNQTQLRKILAFSSIAHLG-WMTAVILY-------NP 198
Cdd:PRK08667 246 VMLKVAVYGLVRFLMDVLSPelwwgVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGiILMGIGLYvifgvygLD 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 199 KLALLTF-------YLYVLTTSTVFLTLNS----TKTLKLTTLMTSWTKSPSLNATLMLVLLSLAGLPPLTGFLPKWLIT 267
Cdd:PRK08667 326 TLALLALggalfhsLNHALFKSLLFLTAGSvvhaTGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLY 405
|
...
gi 182895099 268 QEL 270
Cdd:PRK08667 406 ESF 408
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-191 |
1.01e-06 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 50.20 E-value: 1.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 50 PRAIEATIKYFLVQATASTLLLFSSMT----NAWSTGQWDIAQLTHPTSS--------LLLTVAIAMKLGLVPFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIYlvvvYYNATGTFDIADLLNLPLPpgvqywlfLAFFIAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 118 VLQ-----GSSLTTALLLST----MMKF--PptvLLLLTAHSLNPtLLTTLAITSVALGGWMGLNQTQLRKILAFSSIAH 186
Cdd:PRK05846 237 AHVqaptaGSVLLAGILLKMgaygLLRFslP---LFPDASHEFAP-IIITLGVIAIIYGALVALAQTDIKKLIAYSSISH 312
|
....*
gi 182895099 187 LGWMT 191
Cdd:PRK05846 313 MGFVT 317
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
51-268 |
2.40e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 48.87 E-value: 2.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 51 RAIEATIKYFLVQATASTLLLFSSMTNAWSTGQWDI-----AQLTHPTS------SLLLTVAIAMKLGLVPFHFWFPEVL 119
Cdd:PRK06277 147 EAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNItdihnALLVNPTSpviyggLLLLIFGLLYGSGLPPFHTIKSDIY 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 120 QGSSLTTALLLSTMMKFPPTVLLL--------LTAHSLNPTLLTTLAITSVALGGWMGLNQTQLRKILAFSSIAHLGWMT 191
Cdd:PRK06277 227 AKAKPFGSALLQTFSKFVLVALMLvifklfggLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVA 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 192 AVILYNPKLALLTFYLY----VLTTSTVFL----TLNSTKTLKLTTLMTSWTKSPSLNATLMLVLLSLAGLPPLTGFLPK 263
Cdd:PRK06277 307 AGLALGTPLGIVAGIFHainhVIYKSALFLgagiVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSK 386
|
....*
gi 182895099 264 WLITQ 268
Cdd:PRK06277 387 LMLAQ 391
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
4.23e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 48.41 E-value: 4.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 33 LELNTLAIIPFISKSHHPRAIEATIKYFLVQATASTLLLFSSMTNAWSTGQWDIAQLTH--PTSSLLLTVAIAMKLGLVP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 111 FHFWFPEVLQGSSLTTALLLSTMMKFPPTVLLLLTAHSLNPT--LLTTLAITSVALGGWMGLNQTQLRKILAFSSIAHLG 188
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLdlIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 189 WmtavILYNPKLALLTFYLYVLTTSTVFLTLNSTKTLKLTTLmtswtKSPSLNATLMLVL----LSLAGLPPLTGFLPKW 264
Cdd:PRK07234 283 F----ILAAPLVGGLYALAHGLVKSTLFLCAGALPSRNFTEL-----ISQMLGIGKWIPLtmasFSIAGFPLLAGFVSKV 353
|
....*..
gi 182895099 265 LITQELT 271
Cdd:PRK07234 354 LTLKNLL 360
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-266 |
7.21e-06 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 47.39 E-value: 7.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 55 ATIKYFLVQATASTLLLFSSMTNAWSTG--QWDIAQL---THPTSSLLL-----TVAIAMKLGLVPFHFWFPEV-LQGSS 123
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLrshTLPLSTQLLllapiLVGFGIKIPLVPFHTWLPDAhVEAST 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 124 LTTALLLSTMMKFPPTVLL------LLTAHSLNPTLLTTLAITSVALGGWMGLNQTQLRKILAFSSIAHLGW-------- 189
Cdd:PRK06473 238 PVSVLLAGVLLKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYillaaaaa 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 190 ----MTAVILYNPKLALLTFYLYVLtTSTVFLTLNSTKTLKLTTLMTSWTKSPSLNATLMLVLLSLAGLPPLTGFLPKWL 265
Cdd:PRK06473 318 tplsILAAVFQMISHGLISALLFLL-VGVVYKKTGSRDVDVLRGLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEFL 396
|
.
gi 182895099 266 I 266
Cdd:PRK06473 397 V 397
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-263 |
1.91e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 46.11 E-value: 1.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 50 PRAIEATIKYFLVQATASTLLLFS-SMTNAwSTGQWDIAQL----------THPTSSLLLTVAIAMKLGLVPFHFWFPEV 118
Cdd:PRK12665 157 AARVRAGVTYVMVSMVSSLLFLIGiALVYA-ATGTLNMADLavrldelpsgTRTALFAVLLVAFGIKAAVFPLSFWLPDS 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 119 L-QGSSLTTALLLSTMMK-----FPPTVLLLLTAHSLNpTLLTTLAITSVALGGWMGLNQTQLRKILAFSSIAHLGWMTA 192
Cdd:PRK12665 236 YpTAPAPVTAVFAGLLTKvgvyaIIRTHTLLFPGGGLD-TLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVF 314
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 182895099 193 VILYNPKLALLTFYLYVLTTSTVFLTL--------NSTKTLKLTTLMTSWTKSPSLNATLMLVLLSLAGLPPLTGFLPK 263
Cdd:PRK12665 315 GIALSTVAGLSGAIYYVAHHITVQTTLflvvglieRQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGK 393
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
96-268 |
2.32e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 46.10 E-value: 2.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 96 LLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKFPPTVLLLLTAHSLNPTLLTTLAIT-----SVALGGWMGL 170
Cdd:MTH00032 229 ILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITifgalTAFFAATVGL 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 171 NQTQLRKILAFSSIAHLGWMTAVILYNPKLALLTFYLYVLTTSTVFLTLNSTKTLKLTTL-------MTSWTKSPSLNAT 243
Cdd:MTH00032 309 VQNDLKKVIAYSTCSQLGYMVLIIGIEGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTVdeqdmrkMGGLIHSIPFTYT 388
|
170 180
....*....|....*....|....*.
gi 182895099 244 LMLV-LLSLAGLPPLTGFLPKWLITQ 268
Cdd:MTH00032 389 MMLIgSFSIMGLPYLTGFYSKDLILE 414
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-268 |
2.60e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 45.86 E-value: 2.60e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 55 ATIKYFLVQATASTLLLFSSMTNAWSTGQWDIA-------QLTHPTSSLLLT---VAIAMKLGLVPFHFWFPEVLQGSSL 124
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDydaistqNLSLNTQLILLTgllLGFGIKIPLVPLHTWLPDAYTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 125 TTALLLSTMMKFPPTVLLLL--------TAHSLNPTLLTTLAItSVALGGWMGLNQTQLRKILAFSSIAHLGWMTAVILY 196
Cdd:PRK07363 238 AVAILLGGVLAKLGTYGLLRfglqlfpqTWSLVAPGLAIIGTI-SVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAA 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 197 NPKLALLTFYLYVLTTSTVFLTL----------NSTKTL-KLTTLMTSWTKSPSLNATLMLVLLSLAGLPPLTGFLPKWL 265
Cdd:PRK07363 317 GTQLSLLGAVAQMISHGLILALLfhlvgiverkVGTRDLdVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFI 396
|
...
gi 182895099 266 ITQ 268
Cdd:PRK07363 397 VFQ 399
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
96-272 |
3.50e-05 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 45.59 E-value: 3.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 96 LLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTM-MKFPPTVLLLLTAHSLNPTL-----LTTLAITSVALGGWMG 169
Cdd:PRK08042 184 LLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMITAFVGGLYA 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 170 LNQTQLRKILAFSSIAHLG--------WMTAVILYNPKLALLTFY--LYVLTT-----STVFLTLNS----TKTLKLTTL 230
Cdd:PRK08042 264 LMEHNIQRLLAYHTLENIGiillglgaGVTGIALEQPALIALGLVggLYHLLNhslfkSVLFLGAGSvwfrTGHRDIEKL 343
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 182895099 231 MTSWTKSPSLNATLMLVLLSLAGLPPLTGFLPKWLITQELTK 272
Cdd:PRK08042 344 GGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
33-266 |
5.37e-05 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 44.97 E-value: 5.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 33 LELNTLAIIPFISKSHHPRAIEATIKYFLVQATASTLLLFSSMTNAWSTGQWD---IAQLTHPTSS---LLLTVAIAMKL 106
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFAlsaLSGLHGSLKYlvfLGILFAAWGKS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 107 GLVPFHFWFPEVLQGSSLTTALLLSTMMKFPPTVLLLLTAHSLNP------TLLTTLAITSVALGGWMGLNQTQLRKILA 180
Cdd:PRK06525 222 AQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPiphvigYVGAVMAIVTLLYGFLMYLPQQDMKRLLA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 181 FSSIAHLGWM---TAVILYNPKLALLTFYLYVLTTSTV----FLTLN----STKTLKLTTLMTSWTKSPSLNATLMLVLL 249
Cdd:PRK06525 302 YSTITQLGYMffgLSLAILGSRLALEGSIAYIFNHAFAkslfFLVAGalsySCGTRLLPRLRGVLKKLPLVGVGFCVAAL 381
|
250
....*....|....*..
gi 182895099 250 SLAGLPPLTGFLPKWLI 266
Cdd:PRK06525 382 AITGVPPFNGFFSKFPI 398
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-279 |
8.08e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 44.42 E-value: 8.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 2 NPHTKLISSLSLVLGTTITISSTHWVMaWAGLELNTLAIIPFISKSHHPRAIEATIKYFLVQATASTLLLFSSMTNAWS- 80
Cdd:PRK06589 115 SSRFLFFFNLTILIGVLIALSSDLFTM-FVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTk 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 81 TGQWDIAQ---LTHPTSSLLLTVAIAM--KLGLVPFHFWFPEVLQGSSLTTALLLSTMM----KFPPTVLLL-------L 144
Cdd:PRK06589 194 TGNLDFVSgglFSKNQSIILLLMFIYGiaKTAIFPVHSWLPAAMVAHYPVSALLHAVIVvktgLFCIYKILLyifglsyL 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 145 TAHSLNPTLLTTLAITSVALGGWMGLNQTQLRKILAFSSIAHLGW--MTAVILYNPKLALLTFYL--YVLTTSTVFLTLN 220
Cdd:PRK06589 274 QRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLalLSAFILTPKALGAAILHLvsHSFAKICLFYSMG 353
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 182895099 221 STKTLK----LTTLMTSWTKSPSLNATLMLVLLSLAGLPPLTGFLPKWLITQELTKQEMATTA 279
Cdd:PRK06589 354 SIYSLKkedqVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLS 416
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
1.01e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 44.05 E-value: 1.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 48 HHPRAIEATIKYFLVQATASTLLLFSSMTNAWSTGQWDIAQLTHPTSSL--------------LLTVAIAMKLGLVPFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIenikghplflitliLIFIGAAAKSAQGPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 114 WFPEVLQGSSLTTALLLS-TMMKfpPTVLLLLTAHSLNP------TLLTTLAITSVALGGWMGLNQTQLRKILAFSSIAH 186
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSaTMVK--AGVYLVARIHPIFSgteawfILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQ 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 187 LGWMTAVILYNPK------LALLTFYLYVLTT--STVFL----TLNSTKTLKLTTLMTSWTKSPSLNATLMLVLLSLAGL 254
Cdd:PRK12649 314 LAYLMTMYGYTTYhepglgVAAATFHLLNHATfkACLFLvagiVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGI 393
|
....*....
gi 182895099 255 PPLTGFLPK 263
Cdd:PRK12649 394 PPLNGFLSK 402
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-188 |
1.62e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 43.48 E-value: 1.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 55 ATIKYFLVQATASTLLLFSSMTNAWSTGQ--WDIAQLTHPTSSLLLT--------VAIAMKLGLVPFHFWFPEVLQGSSL 124
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAKSYPLALElllyagflIAFGVKLPIFPLHTWLPDAHGEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 182895099 125 TTALLLS---------TMMKFppTVLLLLTAHSLNPTLLTTLAITSVALGGWMGLNQTQLRKILAFSSIAHLG 188
Cdd:PRK12561 218 PVSMILAgvllkmggyALIRF--NVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMG 288
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
110-272 |
6.21e-04 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 41.66 E-value: 6.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 110 PFHFWFPEVLQGSSLTTALLLS-TMMKFPPTVLL----LLTAHSLNPTLLTTLAITSVALGGWMGLNQTQLRKILAFSSI 184
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLHSaTMVKAGIFLLFrftpLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 185 AHLGW-MTAV-----ILYNPKLALLTFYLYVLTTStVFLTLN-----------------STKTLKLTTLMTSWTKSPSLN 241
Cdd:PRK12646 308 SQLGMiMAMVgigggYAQHQQDAIASIYVFVLFAA-LFHLMNhaifkcalfmgvgiidhEAGTRDIRILSGMRQLFPKMN 386
|
170 180 190
....*....|....*....|....*....|.
gi 182895099 242 ATLMLVLLSLAGLPPLTGFLPKWLITQELTK 272
Cdd:PRK12646 387 LVMTIAALSMAGVPFLNGFLSKEMFLDALTQ 417
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
96-316 |
8.08e-04 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 41.22 E-value: 8.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 96 LLLTVAIAMKLGLVPFHFWFPEVLQGSSLTTALLLSTMMKFPPTVLL-----LLTAHSLNPTLLTTLAITSVALGGWMGL 170
Cdd:MTH00020 214 LFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLirsspLFEQAPLALIIVTIVGSLTVFFAATVGL 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 171 NQTQLRKILAFSSIAHLGWMT-AVILYNPKLALL-----TFY--LYVLTTSTVFLTLNSTKTLKLttlMTSWTKSPSLNA 242
Cdd:MTH00020 294 VQNDLKKVIAYSTCSQLGYMVvACGLSHYSISLFhlmnhAFFkaLLFLSAGSVIHALSDEQDMRK---MGGLISFLPLTY 370
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 182895099 243 TLMLV-LLSLAGLPPLTGFLPKWLITQELTKQEMATTATLLAILSLLGLFFY-LRLAYHSTITLPPNSTNYMKHWH 316
Cdd:MTH00020 371 IFFLIgSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYsIRLIYLTFLSNTNLKKAVFFHLH 446
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
80-266 |
1.03e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 40.90 E-value: 1.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 80 STGQWDIAQLTHPTSSLLLTVAI---AM-KLGLVPFHFWFPEVLQGSSLTTALLLSTMMKFPPTVLL------LLTAHSL 149
Cdd:MTH00207 163 NQGHWSITNMWQTDMNNYIALSImiaAMtKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLirfypfLSSTYWF 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 150 NPTLLTTlAITSVALGGWMGLNQTQLRKILAFSSIAHLG-WMTAVILYNPKLALLTFYLYVLTTSTVFLTLNST-----K 223
Cdd:MTH00207 243 NPALLLT-ASLTMLMAGLSAMTECDMKKIIALSTLSQLGvMMASLGLGMPKLALFHLITHALFKALLFVCAGSLihshhH 321
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 182895099 224 TLKLTTLMTSWTKSPSLNATLMLVLLSLAGLPPLTGFLPKWLI 266
Cdd:MTH00207 322 SQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLI 364
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
14-270 |
1.45e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 40.54 E-value: 1.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 14 VLGTTITISSTHWVMAWAGLELNTLA---IIPFISKSHHPRAIeatikyFLVQATASTLLLFSSMTNAWS-TGQWDIAQL 89
Cdd:PRK06459 82 ILGMAIVLTSDNYLLFLAGWEIMTIPsyvAIALTKKNKRPAFV------FMAFGELSTVLILAGFAWAFIiSGTTNFSYL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 90 THPTSSLLLTVAIAMKLGLVPFHF--WFPEVLQGSSLTTALLLSTMMK----FPPTVLLLLTAHSLNPTLLTTLAIT--- 160
Cdd:PRK06459 156 PSPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTlmgvYGILKMTILTQTIPIGYFGLTILAIgaf 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 161 SVALGGWMGLNQTQLRKILAFSSIAHLGWMTA-----VILYNPK-----LALLTFYLYVLTTST----VFLTLNSTKTLK 226
Cdd:PRK06459 236 SILFGALYAYVSENVKGLLAFSTIENNGAILValglyMVTKQLItsiehFSLITVILYSFAHSVaktgLFLSSGLQEKQS 315
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 182895099 227 LTTLMTSWTKSPSLNATLMLvlLSLAGLPPLTGFLPKWLITQEL 270
Cdd:PRK06459 316 ITYSKKIRNRWIELGLTLLA--SSLSGLLPNIGGVASWLLLESL 357
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
100-265 |
2.27e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 39.90 E-value: 2.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 100 VAIAMKLGLVPFHFWFPEV-----LQGSSLTTALLLS------TMMKFPptvLLLLTAHSLNPTLLtTLAITSVALGGWM 168
Cdd:MTH00226 238 LAMAVKIPIFPFHIWLPKAhveapVAGSVLLAGILLKlggyglVRLSWP---ILPLGAQNLAPAVI-AMGIVGIVYGSFA 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 169 GLNQTQLRKILAFSSIAHLGwMTAVILYNPKLALLTFYLYVL----TTSTVFLTLNSTKTLKLTTLMTSWTKSPSLN--- 241
Cdd:MTH00226 314 TCRQIDVKRLVAYSSVAHMG-LVSITLVTHDIIGLTGSIFIMlahgIVSSLLFILVTILYDRHHTRLIKYYRGLSITmpi 392
|
170 180
....*....|....*....|....*.
gi 182895099 242 -ATLMLVL-LSLAGLPPLTGFLPKWL 265
Cdd:MTH00226 393 wGTIMIVTsLANVAVPPSGNFIGEYL 418
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-268 |
2.51e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 39.55 E-value: 2.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 56 TIKYFLVQATASTLLLFSSMTNAWSTGQWD-------IAQLTHPTSSLLLTVAI------AMKLGLVPFHFWFPE----- 117
Cdd:PRK07691 160 SIKYVLINVVSSAFFVVAVAILYSVVGTLNmadisvkIAELSAGQTGLITVVAIlflfvfATKAGLFPLYFWLPGsyyap 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 118 -----VLQGSSLTTALLLSTMMKFpptVLLLLTAHSLNPTLLTTLAITSVALGGWMGLNQTQLRKILAFSSIAHLGWMTA 192
Cdd:PRK07691 240 piaiaALFGALLTKVGVYAIARTF---TLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILV 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 193 VILYNPKLALL--TFYL--YVLTTSTVFL----TLNSTKTLKLTTLMTSWTKSPSLNATLMLVLLSLAGLPPLTGFLPKW 264
Cdd:PRK07691 317 GVAMMTESGMIgaIYYLihDMIVKAALFLligiMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKF 396
|
....
gi 182895099 265 LITQ 268
Cdd:PRK07691 397 FIVE 400
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-333 |
2.56e-03 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 35.70 E-value: 2.56e-03
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 182895099 291 FFYLRLAYHSTITLPPNSTNYMKHWHFTKPTN-ASAAILATLST 333
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNtLLLPTLTTLSI 44
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
52-190 |
5.17e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 38.85 E-value: 5.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 52 AIEATIKYFLVQATASTLLLFSSMTNAWSTGQWDIAQLTHPTSSLLLTVAIAMKLGLV----------------PFHFWF 115
Cdd:PRK07376 171 AADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLlcilvflgpmaksaqfPLHVWL 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182895099 116 PEVLQGSSLTTALLLSTMMKFPPTVLL--LLTAHSLNPTLLTTLAIT---SVALGGWMGLNQTQLRKILAFSSIAHLGWM 190
Cdd:PRK07376 251 PDAMEGPTPISALIHAATMVAAGVFLVarMYPVFEQFPAVMTVIAWTgaiTAFLGASIALTQNDIKKGLAYSTISQLGYM 330
|
|
| |
