NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|187371583|gb|ACD02685|]
View 

ATPase subunit 8, partial (mitochondrion) [Chlorospingus flavopectus jacqueti]

Protein Classification

ATP synthase F0 subunit 8( domain architecture ID 10009578)

ATP synthase F0 subunit 8 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
ATP8 MTH00133
ATP synthase F0 subunit 8; Provisional
 1-54 5.27e-13

ATP synthase F0 subunit 8; Provisional


:

Pssm-ID: 177191  Cd Length: 55  Bit Score: 56.42  E-value: 5.27e-13
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....
gi 187371583  1 MPQLNPNPWFFIMITSWLTFSLIIQPKLLSFVTMNPPSNKPPAAPSTTPWTWPW 54
Cdd:MTH00133  1 MPQLNPAPWFAILVFSWLVFLTIIPPKVLAHTFPNEPTPQSTEKPKTEPWNWPW 54
 
Name Accession Description Interval E-value
ATP8 MTH00133
ATP synthase F0 subunit 8; Provisional
 1-54 5.27e-13

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177191  Cd Length: 55  Bit Score: 56.42  E-value: 5.27e-13
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....
gi 187371583  1 MPQLNPNPWFFIMITSWLTFSLIIQPKLLSFVTMNPPSNKPPAAPSTTPWTWPW 54
Cdd:MTH00133  1 MPQLNPAPWFAILVFSWLVFLTIIPPKVLAHTFPNEPTPQSTEKPKTEPWNWPW 54
ATP-synt_8 pfam00895
ATP synthase protein 8;
1-54 5.22e-08

ATP synthase protein 8;


Pssm-ID: 459986  Cd Length: 54  Bit Score: 43.48  E-value: 5.22e-08
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 187371583   1 MPQLNPNPWFFIMITSWLTFSLIIQPKLLSFVTMNPPSNKPPAAPSTTPWTWPW 54
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSHTPTNPPPKSLKTTKHPNPWEWKW 54
 
Name Accession Description Interval E-value
ATP8 MTH00133
ATP synthase F0 subunit 8; Provisional
 1-54 5.27e-13

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177191  Cd Length: 55  Bit Score: 56.42  E-value: 5.27e-13
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....
gi 187371583  1 MPQLNPNPWFFIMITSWLTFSLIIQPKLLSFVTMNPPSNKPPAAPSTTPWTWPW 54
Cdd:MTH00133  1 MPQLNPAPWFAILVFSWLVFLTIIPPKVLAHTFPNEPTPQSTEKPKTEPWNWPW 54
ATP8 MTH00123
ATP synthase F0 subunit 8; Provisional
 1-55 5.71e-13

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 214426  Cd Length: 54  Bit Score: 56.05  E-value: 5.71e-13
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 187371583  1 MPQLNPNPWFFIMITSWLTFSLIIQPKLLSFVTMNPPSnKPPAAPSTTPWTWPWT 55
Cdd:MTH00123  1 MPQLNPAPWFLIMLLTWLTLILIIQPKILSFTPTNNPT-KTNTTTNTTPWTWPWT 54
ATP8 MTH00171
ATP synthase F0 subunit 8; Provisional
 1-54 2.98e-08

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177225  Cd Length: 54  Bit Score: 44.27  E-value: 2.98e-08
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....
gi 187371583  1 MPQLNPNPWFFIMITSWLTFSLIIQPKLLSFVTMNPPSNKPPAAPSTTPWTWPW 54
Cdd:MTH00171  1 MPQLNPIPWFFIFLFSWLIFLTLLPNKITKHIFTNKPSPNQTEKPKPNEWNWPW 54
ATP-synt_8 pfam00895
ATP synthase protein 8;
1-54 5.22e-08

ATP synthase protein 8;


Pssm-ID: 459986  Cd Length: 54  Bit Score: 43.48  E-value: 5.22e-08
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 187371583   1 MPQLNPNPWFFIMITSWLTFSLIIQPKLLSFVTMNPPSNKPPAAPSTTPWTWPW 54
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSHTPTNPPPKSLKTTKHPNPWEWKW 54
ATP8 MTH00072
ATP synthase F0 subunit 8; Provisional
 1-55 9.11e-08

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 164642  Cd Length: 54  Bit Score: 43.04  E-value: 9.11e-08
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 187371583  1 MPQLNPNPWFFIMITSWLTFSLIIQPKLLSFVTMNPPSNKpPAAPSTTPWTWPWT 55
Cdd:MTH00072  1 MPQLNPGPWFAIFLMSWLIFLLILPFKISNHKNLNEPTSQ-NKKNKPESWNWPWT 54
ATP8 MTH00102
ATP synthase F0 subunit 8; Validated
 1-55 8.33e-04

ATP synthase F0 subunit 8; Validated


Pssm-ID: 214420  Cd Length: 67  Bit Score: 33.28  E-value: 8.33e-04
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 187371583  1 MPQLNPNPWFFIMITSWLTFSLIIQPKLLSFVTMNPPSNKPPAAPS-TTPWTWPWT 55
Cdd:MTH00102  1 MPQLDTSTWFITILSMLLTLFIIFQLKISKHNYPLNPEPKSLKTKKqNTPWEKKWT 56
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH