|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.34e-180 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 503.59 E-value: 1.34e-180
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 1 MNPQAKLIFASSLLLGSTITISSNHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSMINAWH 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 81 TGQWDITQLTCPTSCVILTAAIAMKLGLAPFHFWFPEVLQGCSITTGLLLSTAMKFPPITLLYMTSQSLNPSMLTTMALL 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAVIIAYSPKLALLNFYLYVVMTAAVFLTLNTIKTLNLSTLMTTWAKTPAL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELVNQEMAPTATIIALLSLLGLFFYLRLAYCATITLPPHTTNHMKQWYTNKP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 189035543 321 TNTSVAILVTLSITLLPISPMLRTIV 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
5.20e-145 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 413.43 E-value: 5.20e-145
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 1 MNPQAKLIFASSLLLGSTITISSNHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSMINAWH 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 81 TGQWDITQLTCPTSCVILTAAIAMKLGLAPFHFWFPEVLQGCSITTGLLLSTAMKFPPITLLYMTSQSlNPSMLTTMALL 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAVIIAYSPKLALLNFYLYVVMTAAVFLTLNTIKTLNLSTLMTTWAKTPAL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELVNQEMAPTATIIALLSLLGLFFYLRLAYCATITLPPHTTNHMKQWYTNKP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*..
gi 189035543 321 TNTS-VAILVTLSITLLPISPMLRTIV 346
Cdd:MTH00135 320 QLTLpLAISTTATLMLLPLTPAILALL 346
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-342 |
1.53e-143 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 409.70 E-value: 1.53e-143
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 1 MNPQAKLIFASSLLLGSTITISSNHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSMINAWH 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 81 TGQWDITQLTCPTSCVILTAAIAMKLGLAPFHFWFPEVLQGCSITTGLLLSTAMKFPPITLLYMTSQSLNPSMLTTMALL 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAVIIAYSPKLALLNFYLYVVMTAAVFLTLNTIKTLNLSTLMTTWAKTPAL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELVNQEMAPTATIIALLSLLGLFFYLRLAYCATITLPPHTTNHMKQWYTNKP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|..
gi 189035543 321 TNTSVAILVTLSITLLPISPML 342
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTI 342
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
2.56e-126 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 365.71 E-value: 2.56e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 1 MNPQAKLIFASSLLLGSTITISSNHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSMINAWH 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 81 TGQWDITQLTCPTSCVILTAAIAMKLGLAPFHFWFPEVLQGCSITTGLLLSTAMKFPPITLLYMTSQSLNPSMLTTMALL 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAVIIAYSPKLALLNFYLYVVMTAAVFLTLNTIKTLNLSTLMTTWAKTPAL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELVNQEMAPTATIIALLSLLGLFFYLRLAYCATITLPPhTTNHMK-QW-YTN 318
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFP-STNNMKmKWqFEN 319
|
330 340
....*....|....*....|....*..
gi 189035543 319 KPTNTSVAILVTLSITLLPISPMLRTI 345
Cdd:MTH00105 320 TKPMTLLPTLIILSTMLLPLTPMLSIL 346
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-342 |
7.91e-107 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 316.14 E-value: 7.91e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 1 MNPQAKLIFASSLLLGSTITISSNHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSMINAWH 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 81 TGQWDITQLTCPTSCVILTAAIAMKLGLAPFHFWFPEVLQGCSITTGLLLSTAMKFPPITLLYMTSQSLNPSMLTTMALL 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAVIIAYSPKLALLNFYLYVVMTAAVFLTLNTIKTLNLSTLMTTWAKTPAL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELVNQEMAPTATIIALLSLLGLFFYLRLAYCATITLPPHTTNHMKQWYTNKP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|..
gi 189035543 321 TNTSVAILVTLSITLLPISPML 342
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQL 342
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-336 |
1.56e-93 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 282.59 E-value: 1.56e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 1 MNPQAKLIFASSLLLGSTITISSNHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSMINAWH 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 81 TGQWDITQLTCPTSCVILTAAIAMKLGLAPFHFWFPEVLQGCSITTGLLLSTAMKFPPITLLYMTSQSLNPSMLTTMALL 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAVIIAYSPKLALLNFYLYVVMTAAVFLTLNTIKTLNLSTLMTTWAKTPAL 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELVNQEMAPTATIIALLSLLGLFFYLRLAYCATITLPPHTTNHMKQWYTNKP 320
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGN 320
|
330
....*....|....*.
gi 189035543 321 TNTSVAILVTLSITLL 336
Cdd:MTH00041 321 ITVYGVILSILSSISI 336
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-342 |
6.15e-68 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 216.23 E-value: 6.15e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 1 MNPQAKLIFASSLLLGSTITISSNHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSMINAWh 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 81 tgqwdITQLTCPTSCVILTAAIAMKLGLAPFHFWFPEVLQGCSITTGLLLSTAMKFPPITLLYMTsqsLNPSMLTTMALL 160
Cdd:MTH00160 81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAVIIAYSPKLALLNFYLYVVMTAAVFLTLNTIKTLNLSTLMTTWAKTPAL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELVNQEMAPTATIIALLSLLGLFFYLRLAYCATITLppHTTNHMKQWYTNKP 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLN--YNKNKWNLKKKKNK 310
|
330 340
....*....|....*....|..
gi 189035543 321 TNTSVAILVTLSITLLPISPML 342
Cdd:MTH00160 311 FSLILNFLSFISLFGLILSSLL 332
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
7-337 |
5.07e-55 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 183.06 E-value: 5.07e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 7 LIFASSLLLGSTITISSNHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSminawhTGQWDI 86
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 87 TQLTCPTSCVILTAAIAMKLGLAPFHFWFPEVLQGCSITTGLLLSTAMKFPPITLLYMTSQSLNPSMLTTMALLSAALGG 166
Cdd:MTH00011 83 PSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 167 WMGLNQTQTRKILAFSSISHLGWMAVIIAYSPKLALLNFYLYVVMTAAVFLTLNTIKTLNLSTLMTTWAKTPALSAMLML 246
Cdd:MTH00011 163 LGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFI 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 247 TLLSLAGLPPLTGFLPKWLIIQELVNQEMAPTATIIALLSLLGLFFYLRLAYcATITLPPHTTNHMKQWYTnkPTNTSVA 326
Cdd:MTH00011 243 MLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSSLKSAPYE--PKTKILI 319
|
330
....*....|.
gi 189035543 327 ILVTLSITLLP 337
Cdd:MTH00011 320 SMCTLSLGLIP 330
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
5-302 |
1.03e-51 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 174.30 E-value: 1.03e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 5 AKLIFASSLLLGSTITISSNHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSMINAWHTGQW 84
Cdd:MTH00144 5 SNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 85 DITqltcptscVILTAAIAMKLGLAPFHFWFPEVLQGCSITTGLLLSTAMKFPPITLLYMTSQSLNPSM-LTTMALLSAA 163
Cdd:MTH00144 85 FSM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYlLCVISVLSAL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 164 LGGWMGLNQTQTRKILAFSSISHLGWMAVIIAYSPKLALLNFYLYVVMTAAVFLTLNTIKTLNLSTLmtTWAKTPALSAM 243
Cdd:MTH00144 157 VGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDL--GSLKPSYKTGL 234
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 244 L-MLTLLSLAGLPPLTGFLPKWLIIQELVNQEMAPTATIIALLSLLGLFFYLRLAYCATI 302
Cdd:MTH00144 235 SiISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL 294
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
8-298 |
2.94e-43 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 152.13 E-value: 2.94e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 8 IFASSLLLGSTITISSNHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSMINAWHTgqwdit 87
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL------ 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 88 qLTCPTSCVILTAAIAMKLGLAPFHFWFPEVLQGCSITTGLLLSTAMKFPPITLLymTSQSLNPSMLTTMALLSAALGGW 167
Cdd:MTH00197 76 -YLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLIL--AFNSSSFMGLLICSVLSSLIGGI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 168 MGLNQTQTRKILAFSSISHLGWMAVIIAYSPKLALLNFYLYVVMTAAVFLTLNTIKTLNLSTLMTTWAKTPALSAMLMLT 247
Cdd:MTH00197 153 GGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLS 232
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 189035543 248 LLSLAGLPPLTGFLPKWLIIQELVNQEMAPTATIIALLSLLGLFFYLRLAY 298
Cdd:MTH00197 233 FLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAY 283
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-298 |
1.65e-38 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 142.56 E-value: 1.65e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 14 LLGSTITISSNHWIMAWTGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASTLLLF-SSMINAWhTGQWDITQLTC 91
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYGA-TGSLNLAGIAA 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 92 PTS------------CVILTAAIAMKLGLAPFHFWFPEVLQGCSITTGLLLSTAMK----FPPITLLYMTSQSLNPS--- 152
Cdd:COG1007 191 ALAagganspllllgLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaafAALLRLLVEAFPGLAADwql 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 153 MLTTMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAVIIAYSPKLAL--LNFYL--YVVMTAAVFLTLNTIK----- 223
Cdd:COG1007 271 LLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNLGAFAVILLLSrkgge 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 189035543 224 TLNLSTLMTTWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQELVNQEMAPTATIIALLSLLGLFFYLRLAY 298
Cdd:COG1007 351 AEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVK 425
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
1.79e-34 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 131.48 E-value: 1.79e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 14 LLGSTITISSNHWIMAWTGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASTLLL--------------FSSMINA 78
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLygmsllygatgslsFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 79 WHTGQWDITQLTcpTSCVILTAAIAMKLGLAPFHFWFPEVLQGCSITTGLLLSTAMK---FPPIT-LLYMTSQSLNPS-- 152
Cdd:PRK05777 193 LADGSGNSLLLL--FGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAVLLrLLVVAFGGLSEDwq 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 153 -MLTTMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAVIIAYSPKLAL--LNFYL--YVVMTAAVFLTLNTIKTLNL 227
Cdd:PRK05777 271 qVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYLlaYLFMTLGAFGVISLLRRKGG 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 189035543 228 -STLMTTWA----KTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQELVNQEMAPTATIIALLSLLGLFFYLRL 296
Cdd:PRK05777 351 eAESISDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
7.30e-33 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 125.14 E-value: 7.30e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 13 LLLGSTITISSNHWIMAWTGLEINTLAILPLI-SKSHHPRAIEAATKYFLVQAAASTLLLFS-------------SMINA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 79 WHTGQWDITQLTCPTSCVILTAAIAMKLGLAPFHFWFPEVLQGCSITTGLLLSTAMKFPPITLLYmtSQSLNPSMLTTMA 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILV--SIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 159 LLSAALGGWMGLNQTQTRKILAFSSISHLGWMAVIIAY----SPKLALLNFYLYVVMTAAVF---LTLNTIKTLnLSTLM 231
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIgsfeSIQASLVYLFIYIIMSICVFsiiLALNVYKNL-IIEFS 238
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 189035543 232 TTWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQELVNQEMAPTATIIALLSLLGLFFYLRL 296
Cdd:MTH00196 239 GLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-297 |
7.41e-29 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 115.82 E-value: 7.41e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 14 LLGSTITISSNHWIMAWTGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASTLLLFSSMINAWHTGQWDITQLT-- 90
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLlf 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 91 ----------CPTSCVILTAAIAMKLGLAPFHFWFPEVLQGCSITTGLLLSTAMK---FPPITLLYMTSQS----LNPSM 153
Cdd:TIGR01770 192 lsngmlnislLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKiaiFAVFLRLFLYILFgfseAWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 154 LTTMALLSAALGGWMGLNQTQTRKILAFSSISHLGW--MAVIIAYSPKLALLNFYL--YVVMTAAVFLTL------NTIK 223
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYilIGLLAGTLEGIKAVLFYIfiYALMSLGAFGVLsllrsyKDEW 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 189035543 224 TLNLSTLMTTWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQELVNQEMAPTATIIALLSLLGLFFYLRLA 297
Cdd:TIGR01770 352 IEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
4.84e-27 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 110.88 E-value: 4.84e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 13 LLLGSTITISSNHWIMAWTGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASTLLLFSSMINAWHTGQWDI----T 87
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 88 QLTCPTSCVILTAAIAMKLGLAPFHFWFPEVLQGCSITTGLLLSTAMKFPPITLLYMTSQSLNpsMLTTMALLSAALGGW 167
Cdd:MTH00199 186 ILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTN--VVLICAVLSIIYGAI 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 168 MGLNQTQTRKILAFSSISHLGWMAVIIAY----SPKLALLNFYLYVVMTAAVF---LTLNTIKTLnLSTLMTTWAKTPAL 240
Cdd:MTH00199 264 GALNQTKIKRLLAYSGIGHMGFILFGVAIgsfeSIQASLIYMIIYVIMSICSFsiiLSLKLTKGL-IVEVSGLSRKNPVI 342
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 189035543 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELVNQEMAPTATIIALLSLLGLFFYLRL 296
Cdd:MTH00199 343 ALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-296 |
2.24e-26 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 108.31 E-value: 2.24e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 13 LLLGSTITISSNHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSMINAWHTGQWDITQLTC- 91
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAr 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 92 ---------PTSCVILTAAIAMKLGLAPFHFWFPEVLQGCSITTGLLLSTAMKFPPITLLYMTSQSLNPSM--------L 154
Cdd:COG0651 196 laeldpgllLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGADpalflgtlL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 155 TTMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAVIIAYSPKLALLNFYLYVV----MTAAVFLT----LNTIKTLN 226
Cdd:COG0651 276 LVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLnhalAKALLFLAagaiERATGTRD 355
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 227 LSTLMTTWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQELVNQEMAPTATIIALLSLLGLFFYLRL 296
Cdd:COG0651 356 LDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-272 |
2.34e-26 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 106.24 E-value: 2.34e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 23 SNHWIMAWTGLEINTLAILPLI-SKSHHPRAIEAATKYFLVQAAASTLLLFSSMINAWHTGQWDITQL-----------T 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 91 CPTSCVILTAAIAMKLGLAPFHFWFPEVLQGCSITTGLLL-STAMKFPPI-----TLLYMTSQSLNPSMLTTMALLSAAL 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLaATLVKAGGYglirrSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 165 GGWMGLNQTQTRKILAFSSISHLGWMAVIIA----YSPKLALLNFYLYVVMTAAVFL-----TLNTIKTLNLSTLMTTWA 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGagtiYGIQAAIFHLLTHGLFSAGLFLcagsvIYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|....*..
gi 189035543 236 KTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQELVN 272
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVA 277
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-302 |
2.65e-19 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 88.76 E-value: 2.65e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 15 LGSTITISSNHWIMAWTGLEINTLAILPLISKSHHPRAI---------EAATKYFLVQAAASTLLLFSSMINAWHTGQ-- 83
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNeg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 84 --WDITQLTCPTSCVIL----------TAAIAMKLGLAPFHFWFPEVLQGCSITTGLLLSTAMKFPPITLLymTSQSLNP 151
Cdd:MTH00198 279 mlGTILSATLETTNIELrqgslgylfiTVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILL--TSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 152 SMLTTMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAVIIAYSPKLALLNFYLYVVM----TAAVFLTLNTIKTLN- 226
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTylvsALASFTVICTLEEFGt 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 227 --------------------LSTLMTTWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQELVNQEMAPTATIIALLS 286
Cdd:MTH00198 437 rtptsrqrdgsfgnynlvrrLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIYYLVA 516
|
330 340
....*....|....*....|...
gi 189035543 287 LLGL-------FFYLRLAycATI 302
Cdd:MTH00198 517 LFAIictcisaFYYIRIV--ATI 537
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
7-263 |
3.11e-16 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 79.28 E-value: 3.11e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 7 LIFASSLLLGSTITISSNHWIMAWTGLEINTLAILPLISKSHHP-RAIEAATKYFLVQAAASTLLL--FSSM--INAWHT 81
Cdd:CHL00049 114 LLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDvRSNEATMKYLLMGGASSSILVygFSWLygLSGGEI 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 82 GQWDI------TQLTCPTSCVI----LTAAIAMKLGLAPFHFWFPEVLQGC-----------SITTGLLLSTAMkfppIT 140
Cdd:CHL00049 194 ELQEIvnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTPDVYEGSptpvvaflsvtSKVAASALATRI----FD 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 141 LLYMTSQSLNPSMLTTMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAV-IIA------YSPKLALLNFYLYVVMTA 213
Cdd:CHL00049 270 IPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIgIIVgdsndgYASMITYMLFYIFMNLGT 349
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 189035543 214 AVFLTLNTIKTL--NLSTLMTTWAKTPALSAMLMLTLLSLAGLPPLTGFLPK 263
Cdd:CHL00049 350 FACIVLFGLRTGtdNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-333 |
4.45e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 76.07 E-value: 4.45e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 33 LEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSMINAWHTGQWDITQLT--CPTSCVILTA------AIAM 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAgaLAENPTVVTAfgfvllALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 105 KLGLAPFHFWFPEVLQGCS-ITTGLLLSTAMK----------FPPITLLYMTSQSLNpSMLTTMALLSAALGGWMGLNQT 173
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAAPpVVTALLSGLVTKvavyaliriyFTVFGGDFRFALGLG-WLLAVLALLSMLVGSLAALGQD 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 174 QTRKILAFSSISHLGWMAVIIAYSPKLALLN--FYL--YVVMTAAVFLTLNTI----KTLNLSTLMTTWAKTPALSAMLM 245
Cdd:PRK08375 294 DVKRVLAYSTVSQMGYILLGLALLTPLALAAglLHLlhHALMKGALFLAAGAIevtyGTRRLSELSGLGRRMPLTAAAFA 373
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 246 LTLLSLAGLPPLTGFLPKWLIIQELVNQEMAPTATIIALLSLLGLFFYLRLAYCATITLPPHTTNHmkqwYTNKPTNTSV 325
Cdd:PRK08375 374 VASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPPGSEA----PKQEAPLGML 449
|
....*...
gi 189035543 326 AILVTLSI 333
Cdd:PRK08375 450 APSLALAL 457
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
2.98e-13 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 70.47 E-value: 2.98e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 50 PRAIEAATKYFLVQAAASTLLLF-SSMINAWHTGQwdiTQL--------TCPT-----SCVILTAAIAMKLGLAPFHFWF 115
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGS---TQLsaialaliTSPSlglalALVFVIAGIAFKISAVPFHQWT 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 116 PEVLQGCSITTGLLLSTAMKFPPITLLYMTSQSLNPSM-------LTTMALLSAALGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:PRK02504 234 PDVYEGSPTPVVAFLSVGSKAAGFALAIRLLVTAFPSFdeqwkllFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAG 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 189 W-MAVIIA-----YSPKLALLNFYLYVVMTAAVFLTLNTIKTLN--LSTLMTTWAKTPALSAMLMLTLLSLAGLPPLTGF 260
Cdd:PRK02504 314 FvMIGLVAgteagYASMVFYLLAYLFMNLGAFACVILFSLRTGTdqISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGF 393
|
...
gi 189035543 261 LPK 263
Cdd:PRK02504 394 FGK 396
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
2-298 |
3.05e-12 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 67.33 E-value: 3.05e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 2 NPQAKLIFASSLLLGSTITISSNHWIMAWTGLEINTLAILPLISKSHHpRAIEAATKYFLVQAAASTLLLFSSMINAWHT 81
Cdd:PRK08668 96 NDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKT 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 82 GQWDIT-------QLTCPTSCVI----LTAAIAMKLGLAPFHFWFPE-----------VLQGCSITTG---LLLSTAMkF 136
Cdd:PRK08668 175 GTFDFAdisqgliNDTSTGFALIvflfLLAFGVAKAGIFPLHVWAPDayseapqsfsaVLSGQLSKLGaygFLLVLYV-L 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 137 PPITLLY----MTSQSLNPSMLTTMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAVIIAYSPKL----ALLNFYLY 208
Cdd:PRK08668 254 PGTKLFSefgtYRGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLgfagGLFHVFNH 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 209 VVMTAAVFLTLNTI----KTLNLSTLMTTWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQELVNQEMAPTATIIAL 284
Cdd:PRK08668 334 ALFKGLFFLIFAAViyrtGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFF 413
|
330
....*....|....
gi 189035543 285 LSLLGLFFYLRLAY 298
Cdd:PRK08668 414 GSIGSFLYVFRPLA 427
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-288 |
3.77e-12 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 67.03 E-value: 3.77e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 49 HPRAIEAATKYFLVQAAASTLLLFSSMINAWHTGQW-----DITQLTCPTS-----CVILTAAIAMKLGLAPFHFWFPEV 118
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfdiaELAAAPLPLTaqlllFLAFFIAFAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 119 LQGCSITTGLLLSTAM---------KFPpITLLYMTSQSLNPSMLTtMALLSAALGGWMGLNQTQTRKILAFSSISHLGW 189
Cdd:COG1008 236 HVEAPTAGSVLLAGVLlkmggygllRFA-LPLFPEASAYFAPLLAA-LGVIGIIYGALVALAQTDLKRLIAYSSVSHMGF 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 190 MAVIIAYSPKLALLNFYLYVV----MTAAVFLTLNTI----KTLNLSTLMTTWAKTPALSAMLMLTLLSLAGLPPLTGFL 261
Cdd:COG1008 314 VLLGIFALNPLGLQGAVLQMVshglITAALFLLVGVLydrtHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFV 393
|
250 260
....*....|....*....|....*..
gi 189035543 262 PKWLIIQELVnqEMAPTATIIALLSLL 288
Cdd:COG1008 394 GEFLVLLGAF--QVNPWLAILAALGLI 418
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-287 |
1.72e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 65.12 E-value: 1.72e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 33 LEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASTLLLFSSminAWHTGQWDI-------------TQLTCPTSCVIL 98
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGI---ALLYGQYGTlnmaylavkmsenPTVVAKIALALF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 99 TAAIAMKLGLAPFHFWFPEVLQGC--SITTGLLLSTAMKFPPITLLYMTSQSLNPSMLTT------MALLSAALGGWMGL 170
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYPAApsSISAMLLVIKQAGLYALARVLFSIYGPAINLATVgwviiiLGCLTMFVGVAMAV 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 171 NQTQTRKILAFSSISHLGWMAV-----IIAYSPKL-----------ALLNFYLYVVMTAAVFLT----LNTIKTLNLSTL 230
Cdd:PRK08376 307 VQKDVKRLLAYHSVSQIGYMLLglgvgLAALGDPAmasygeialagGIYHIVNHALYKALLFLTagavIYETGTRNLNEL 386
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 189035543 231 MTTWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQE--LVNQEMAPTATIIALLSL 287
Cdd:PRK08376 387 GGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESsaLFNPILGVIAMIGSVLTL 445
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-344 |
2.53e-11 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 64.28 E-value: 2.53e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 34 EINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSMINAWHTGQWDITQ-----LTCPTSCVILTAAIAMKLGL 108
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSPVIYGGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 109 A------PFHFWFPEVLQGCSITTGLLLSTAMKFPPITLLYMT-----SQSLNPSMLTTMALLSAA---LGGWMGLNQTQ 174
Cdd:PRK06277 210 LygsglpPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIfklfgGLSYFPSAQGVLIALSVLamvFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 175 TRKILAFSSISHLGWMAVIIA----YSPKLALLNFYLYVVMTAAVFLTLNTI----KTLNLSTLMTTWAKTPALSAMLML 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLAlgtpLGIVAGIFHAINHVIYKSALFLGAGIVsyrtKTSNLRKLGGLLPVMPVVAFMVLC 369
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 247 TLLSLAGLPPLTGFLPKWLIIQELVNQEMAPTATIIALLSLLGLFFYLRLAYcaTITLPPhttNHMKQWYTN-KPTNTSV 325
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY--LIYLKP---KPEELEYKNkKVPKYAV 444
|
330 340
....*....|....*....|.
gi 189035543 326 AILVTLSI--TLLPISPMLRT 344
Cdd:PRK06277 445 FSLAVLTIlcIILGLFPDLVT 465
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
29-304 |
1.01e-10 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 63.14 E-value: 1.01e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 29 AWtglEINTLAILPLISKSHhPRAIEAATKYFLVQAAASTLLLFSSMINAWHTGQWDITQLTCPTSCV---ILTAAIAMK 105
Cdd:PRK12650 138 AW---ELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVWAekpGLTTVVAVL 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 106 LGLA--------PFHFWFPEVLQGCSITTGLLLSTAMKFPPITLLYMTSQSLNPSM-----LTTMALLSAALGGWMGLNQ 172
Cdd:PRK12650 214 IAVAaftksaqfPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAvwnwlLIIVGMITALMGAVFAVQK 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 173 TQTRKILAFSSISHLGWMAVIIAYSPKLALLnfyLYVVMTAA-------VFLTLNTIK----TLNLSTLMTTWAKTPALS 241
Cdd:PRK12650 294 TDLKKLTAYSTVSQLGWIVATIGVGTPFALT---AAVVHTLAhalfkssLFMLIGVVDhqagTRDIRRLGSLWRRMPFTF 370
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 189035543 242 AMLMLTLLSLAGLPPLTGFLPKWLIIQELVNQEMaPTATIIALLSLLGLFFYLRLAYCATITL 304
Cdd:PRK12650 371 VSVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPG-GNAGVVLLLVGAALGAVFTFAYSARLVL 432
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-292 |
4.50e-10 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 60.72 E-value: 4.50e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 50 PRAIEAATKYFLVQAAASTLLLFSSMINAWHTGQW----DITQLTCPTSC-----VILTAAIAMKLGLAPFHFWFPEV-- 118
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTfdllELLNLPLPFGVqtwlfLAFFIAFAVKVPLFPLHTWLPDAhv 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 119 ---LQGCSITTGLLLSTA----MKFpPITLLYMTSQSLNPsMLTTMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMA 191
Cdd:TIGR01972 232 eapTAGSVILAGVLLKMGtygfLRF-NLPLFPDASLYFAP-VLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVL 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 192 VIIAYSPKLALLNFYLYVV----MTAAVFLTLNTI----KTLNLSTLMTTWAKTPALSAMLMLTLLSLAGLPPLTGFLPK 263
Cdd:TIGR01972 310 LGIFSFNELGISGAVFQMIshglITAALFLLVGVLyeraHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGE 389
|
250 260
....*....|....*....|....*....
gi 189035543 264 WLIIqelvnQEMAPTATIIALLSLLGLFF 292
Cdd:TIGR01972 390 FLIL-----LGSFKVNPVVAFLAALGIVL 413
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
97-284 |
4.84e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 61.09 E-value: 4.84e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 97 ILTAAIAmKLGLAPFHFWFPEVLQGCSITTGLLLSTAMKFPPITLL------YMTSQSLNPsMLTTMALLSAALGGWMGL 170
Cdd:PRK12644 209 ILVGALS-KSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVarlapgFADVPVWRP-TVLVLGLATMLLGGWRAL 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 171 NQTQTRKILAFSSISHLGWMAVIIAY-SPKLALLNFYLYV---VMTAAVFLTLNTIK----TLNLSTLMTTWAKTPALSA 242
Cdd:PRK12644 287 RQHDLKLILAYGTVSQLGFLTVLVGIgTRDAALAGLAMLLahaLFKAALFLVVGIIDhstgTRDIRKLSGLGRRQPVLAV 366
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 189035543 243 MLMLTLLSLAGLPPLTGFLPKWLIIQELVNQEMAPTATIIAL 284
Cdd:PRK12644 367 VAALAAASMAGLPPLLGFVAKEAALEAVLHDGALGPAGPVVL 408
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
23-298 |
1.05e-09 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 59.78 E-value: 1.05e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 23 SNHWIMAWTGLEINTLAILPLISKSHH-PRAIEAATKYFLVQAAASTLLLFSSMINAWHTGQWDITQL-----TCPTSCV 96
Cdd:COG1009 130 SDNLLLLFVFWELVGLCSYLLIGFWYEkPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELlaaapTILSSPL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 97 ILTAAIAM------KLGLAPFHFWFPEVLQGCSITTGLLLSTAM---------KFPPITLLYMTSQSLnpsmLTTMALLS 161
Cdd:COG1009 210 LTLILLLLllgafgKSAQFPLHFWLPDAMEGPTPVSALLHAATMvkagvyllaRLSPLFALSPVWLTV----VAIIGAIT 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 162 AALGGWMGLNQTQTRKILAFSSISHLGWMAVIIAYSpklallnfylyvVMTAAVFLTLN--TIKTL-------------- 225
Cdd:COG1009 286 ALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG------------AYVAALFHLLThaFFKALlflgagsvihatgt 353
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 189035543 226 ----NLSTLmttWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQELV-NQEMAPTATIIALL-SLLGLFFYLRLAY 298
Cdd:COG1009 354 rdirKMGGL---RKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALeAGGLGPLLLAVALLgAFLTAFYSFRLFF 429
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
8-288 |
4.21e-09 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 57.63 E-value: 4.21e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 8 IFASSLLLgstiTISSNHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYF---------------LVQAAASTLLLF 72
Cdd:PRK06458 116 LFLFTMLL----ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIiicsvgvafalfgtiLVYANAATVMGD 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 73 SSMINAW-----HTGQWDITQLTcpTSCVILTAAIAMKLGLAPFHFWFPE-----------VLqgcsitTGLLLSTAMkF 136
Cdd:PRK06458 192 GEMAILWtellkHASLLDPTLMK--LAFVFLLIGFGTKVGLFPMHAWLPDahseapspvsaLL------SGVLLNVAL-Y 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 137 PPITLLYMTSQSLNP----SMLTTMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAVIIAYSPKLALLNFYLYVVM- 211
Cdd:PRK06458 263 AVLRYYILIDAAIGSdfpgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNh 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 212 ---TAAVFLT----LNTIKTLNLSTLMTTWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQELVnQEMAPTATIIAL 284
Cdd:PRK06458 343 sltKSAIFFAsgnvLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGL-ARGPLLIAILLL 421
|
....
gi 189035543 285 LSLL 288
Cdd:PRK06458 422 LLLT 425
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
2.59e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 54.96 E-value: 2.59e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 33 LEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSMINAWHTGQWDITQLTC--PTSCVILTAAIAMKLGLAP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 111 FHFWFPEVLQGCSITTGLLLSTAMK----FPPITLLYMTSQSLNPsmLTTMALLSAALGGWMGLNQTQTRKILAFSSISH 186
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVkagvFPLVRCALDVPGLDLI--VRIFGVGTALLGVLFALLEKDLKRMLAFSTISQ 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 187 LGWMAVIIAYSPKLALlnfyLYVVMTAAVFLTLNTIKTLNLSTLMTTWAKTPALSAMLMLTlLSLAGLPPLTGFLPKWLI 266
Cdd:PRK07234 281 LGFILAAPLVGGLYAL----AHGLVKSTLFLCAGALPSRNFTELISQMLGIGKWIPLTMAS-FSIAGFPLLAGFVSKVLT 355
|
....*
gi 189035543 267 IQELV 271
Cdd:PRK07234 356 LKNLL 360
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
110-286 |
3.50e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 54.93 E-value: 3.50e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 110 PFHFWFPEVLQGCSITTGLLLSTAMKFPPITLLymtsQSLNPSM---------LTTMALLSAALGGWMGLNQTQTRKILA 180
Cdd:PRK12647 213 PFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLL----ARLNPVLggtplwqtiLPLFGGLTMLTGALLAVRQTDLKLILA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 181 FSSISHLGWMAVIIAYSPKLALLNFYLYVVM----TAAVFLTLNTIK----TLNLSTLMTTWAKTPALSAMLMLTLLSLA 252
Cdd:PRK12647 289 YSTVSALGTLVMLLGLGSELAIKAAVLFLVAhslyKGALFMVAGIIDhetgTRDITKLGGLRRAMPITAAAALLAALSMA 368
|
170 180 190
....*....|....*....|....*....|....*
gi 189035543 253 GLPPLTGFLPKWLIIQELVNQEMAPTA-TIIALLS 286
Cdd:PRK12647 369 GLPPLFGFLAKELIYEALLEAPLWSLIlTVAAVLG 403
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-340 |
3.96e-08 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 49.18 E-value: 3.96e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 189035543 291 FFYLRLAYCATITLPPHTTNHMKQWYTNKPTNT-SVAILVTLSITLLPISP 340
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTlLLPTLTTLSILLLPLTP 51
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
53-298 |
1.18e-06 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 49.95 E-value: 1.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 53 IEAATKYFLVQAAASTLLLFSSMINAWHTGQWDITQL-----------TCPTSCVILTAAIAMKLGLAPFhFWFPEVLQG 121
Cdd:PRK12663 157 LRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIamrlndmgdtaTLTTIALLFLLAFGMKAALFPF-MWLPAAYHT 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 122 CSITTGLLLSTAMK-------FPPITLLYMTSQSLNPSMLTTMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAVII 194
Cdd:PRK12663 236 PNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGL 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 195 AYSPKLALLN--FYLY---VVMTAaVFLTLNTIKTL----NLSTLMTTWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWL 265
Cdd:PRK12663 316 ALGTPAGINGaiFYLVhdmVVKTA-LFLIAGSLVRLtgyrSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVL 394
|
250 260 270
....*....|....*....|....*....|....*.
gi 189035543 266 IIQ---ELVNQEMAPTATIIALLSLLGLFFYLRLAY 298
Cdd:PRK12663 395 LVQgalDNGAYILLALMLITSLITMYSLFRIFFLAY 430
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
110-272 |
3.47e-06 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 48.98 E-value: 3.47e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 110 PFHFWFPEVLQGCSITTGLLLSTAMKFPPITLLYMTSQSLNPS-----MLTTMALLSAALGGWMGLNQTQTRKILAFSSI 184
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSnmyiyIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 185 SHLGWMAVII------AYSPKLALLNFYLYVVMTA------------AVFLTLNTIK----TLNLSTLMTTWAKTPALSA 242
Cdd:PRK12646 308 SQLGMIMAMVgigggyAQHQQDAIASIYVFVLFAAlfhlmnhaifkcALFMGVGIIDheagTRDIRILSGMRQLFPKMNL 387
|
170 180 190
....*....|....*....|....*....|
gi 189035543 243 MLMLTLLSLAGLPPLTGFLPKWLIIQELVN 272
Cdd:PRK12646 388 VMTIAALSMAGVPFLNGFLSKEMFLDALTQ 417
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
105-268 |
4.84e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 48.42 E-value: 4.84e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 105 KLGLapfHFWFPEVLQGCSITTGLLLSTAMKFPPITLLYMT-----SQSLNPSMLTTMALLSAALGGWMGLNQTQTRKIL 179
Cdd:MTH00032 241 QLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSfplfeKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVI 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 180 AFSSISHLGWMAVIIAY--SPKLALLNFYLYVVMTAAVFLTLN------TIKTLNLSTLMTTWAKTPALSAMLMLTLLSL 251
Cdd:MTH00032 318 AYSTCSQLGYMVLIIGIegSHNVGLFHLVNHAFFKALLFLSAGsvihstTVDEQDMRKMGGLIHSIPFTYTMMLIGSFSI 397
|
170
....*....|....*..
gi 189035543 252 AGLPPLTGFLPKWLIIQ 268
Cdd:MTH00032 398 MGLPYLTGFYSKDLILE 414
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
153-271 |
6.23e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 47.81 E-value: 6.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 153 MLTTMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAVIIAYSPKLALLNFYLYVV----MTAAVFLTLNTIK----T 224
Cdd:PRK12662 281 VFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVnhsiVKSALFMVSGSISyhfgT 360
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 189035543 225 LNLSTLMTTWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQELV 271
Cdd:PRK12662 361 TKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFI 407
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-284 |
7.65e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 47.50 E-value: 7.65e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 2 NPQAKLIFASSLLLGSTITISSNHWIMaWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSMI---NA 78
Cdd:PRK06589 115 SSRFLFFFNLTILIGVLIALSSDLFTM-FVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVIliyTK 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 79 WHTGQW-DITQLTCPTSCVILTAAIAM--KLGLAPFHFWFPEVLQGCSITTGLLLSTAM----KFPPITLLYMTSQSLNP 151
Cdd:PRK06589 194 TGNLDFvSGGLFSKNQSIILLLMFIYGiaKTAIFPVHSWLPAAMVAHYPVSALLHAVIVvktgLFCIYKILLYIFGLSYL 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 152 SMLTTM-------ALLSAALGGWMGLNQTQTRKILAFSSISHLGWMA----VIIAYSPKLALLNFYLYVVMTAAVFLTLN 220
Cdd:PRK06589 274 QRIFAEfnwlifiPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALlsafILTPKALGAAILHLVSHSFAKICLFYSMG 353
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 189035543 221 TIKTLN----LSTLMTTWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQELVNQEMAPTATIIAL 284
Cdd:PRK06589 354 SIYSLKkedqVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVML 421
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-296 |
8.55e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 47.25 E-value: 8.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 103 AMKLGLAPFHFWFPE----------VLQGCSITTGLLLSTAMKFppiTLLYMTSQSLNPSMLTTMALLSAALGGWMGLNQ 172
Cdd:PRK07691 220 ATKAGLFPLYFWLPGsyyappiaiaALFGALLTKVGVYAIARTF---TLFFSHDTSFTHYLILILALLTIIFGVIGAVAY 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 173 TQTRKILAFSSISHLGWMAVIIAYSPKLALLNFYLY----VVMTAAVFLTLNTIKTL-------NLSTLMTTWaktPALS 241
Cdd:PRK07691 297 FDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYlihdMIVKAALFLLIGIMIKItgttdlkKMGGLIKRY---PVLG 373
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 189035543 242 AMLMLTLLSLAGLPPLTGFLPKWLIIQELVNQEMAPTATIIALLSLLGLFFYLRL 296
Cdd:PRK07691 374 WMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
111-298 |
2.15e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 46.22 E-value: 2.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 111 FHFWFPEVLQGCSITTGLLLSTAMKFPPITLLYMTSQSLNPSMLTTMAL-----LSAALGGWMGLNQTQTRKILAFSSIS 185
Cdd:MTH00020 229 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVtivgsLTVFFAATVGLVQNDLKKVIAYSTCS 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 186 HLGWMAVIIAYSP-KLALLNFYLYVVMTAAVFLTLNT-IKTLNLSTLMTtwaKTPALSAMLMLTL-------LSLAGLPP 256
Cdd:MTH00020 309 QLGYMVVACGLSHySISLFHLMNHAFFKALLFLSAGSvIHALSDEQDMR---KMGGLISFLPLTYiffligsLSLMGFPY 385
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 189035543 257 LTGFLPKWLIIQELVNQEMAPTATIIALLS-LLGLFFYLRLAY 298
Cdd:MTH00020 386 LTGFYSKDLILELAFGQYYLIFAYWLGCFSaLLTAFYSIRLIY 428
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
140-291 |
2.22e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 46.11 E-value: 2.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 140 TLLYmTSQSLNpSMLTTMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAVIIAYSPKLALLNFYLYVV----MTAAV 215
Cdd:PRK12665 264 TLLF-PGGGLD-TLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAhhitVQTTL 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 216 FLTLNTIK----TLNLSTLMTTWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQELVNQEMAPTATIIA---LLSLL 288
Cdd:PRK12665 342 FLVVGLIErqagSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEAGAEDGTWLAWALVAggvVTSLL 421
|
...
gi 189035543 289 GLF 291
Cdd:PRK12665 422 TLY 424
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
2.41e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 45.98 E-value: 2.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 48 HHPRAIEAATKYFLVQAAASTLLLFSSMINAWHTGQWDITQ---------------LTCPTSCVILTAAiAMKLGLAPFH 112
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATilqdselienikghpLFLITLILIFIGA-AAKSAQGPFY 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 113 FWFPEVLQGCSITTGLLLSTAMKFPPITLLYMTSQSLNPS-----MLTTMALLSAALGGWMGLNQTQTRKILAFSSISHL 187
Cdd:PRK12649 235 IWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQL 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 188 GWMAVIIAYSPK------LALLNFYL--YVVMTAAVFLTLNTI----KTLNLSTLMTTWAKTPALSAMLMLTLLSLAGLP 255
Cdd:PRK12649 315 AYLMTMYGYTTYhepglgVAAATFHLlnHATFKACLFLVAGIVaheaATRDIRKLGGLRKEMPITFIVASIAALAMAGIP 394
|
....*...
gi 189035543 256 PLTGFLPK 263
Cdd:PRK12649 395 PLNGFLSK 402
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-267 |
3.59e-05 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 45.19 E-value: 3.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 50 PRAIEAATKYFLVQAAASTLLLFSSM----INAWHTGQWDITQL---TCPTSCVILT-----AAIAMKLGLAPFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIylvvVYYNATGTFDIADLlnlPLPPGVQYWLflaffIAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 118 VLQ-----GCSITTGLLLSTA----MKFPpITLLYMTSQSLNPsMLTTMALLSAALGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:PRK05846 237 AHVqaptaGSVLLAGILLKMGayglLRFS-LPLFPDASHEFAP-IIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMG 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 189 WMAVIIAYSPKLALLNFYLYVV----MTAAVFLTLNTI----KTLNLSTLMTTWAKTPALSAMLMLTLLSLAGLPPLTGF 260
Cdd:PRK05846 315 FVTLGIFAGNQLGIQGAIFQMIshglSSAALFLLVGVLydrlHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGF 394
|
....*..
gi 189035543 261 LPKWLII 267
Cdd:PRK05846 395 VGEFLIL 401
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-296 |
9.14e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 44.00 E-value: 9.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 1 MNPQAKLIFASSLLLGSTI---TISSNHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSMIN 77
Cdd:PRK06591 109 INNNRKSLFYGILLFAHTGylgMIATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLILIAIGFL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 78 AWHTGQWDITQ----LTCPTSCVILTAAIA-------MKLGLAPFHFWFPEVLQGCS---------ITTGLLLSTAMKFP 137
Cdd:PRK06591 189 LSITGSLNMTDiaayLQEHTNSRIITIAIGffligaiLKTAFFPMHFWMMRAYNNTAsvilvylagISTIIGIYIIYKFT 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 138 PITLLYMTSQSLNPSMLTTMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMaviiayspklallnFYLYVVMTAAVFL 217
Cdd:PRK06591 269 YIIIGYETIKTAITNFIRPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYV--------------FLLYVTENGIIIL 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 218 -------TLNTIKTLNLSTLMTTWAKTPaLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELVNQEMAPTATIIALLSLLGL 290
Cdd:PRK06591 335 psllladSINKIALFLIDAYNESYKREP-NKVLIIIAIICSCGLPISPLFFIKVNILELLLTQNLLLDFIIILLSSVGSL 413
|
....*.
gi 189035543 291 FFYLRL 296
Cdd:PRK06591 414 FYHYKM 419
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
96-296 |
1.10e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 43.93 E-value: 1.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 96 VILTAAIAMKLGLAPFHFWFPEVLQGCSITTGLLLSTAM-KFPPITLLYMTSQ------SLNPSMLTTMALLSAALGGWM 168
Cdd:PRK07363 209 TGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLaKLGTYGLLRFGLQlfpqtwSLVAPGLAIIGTISVIYGALS 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 169 GLNQTQTRKILAFSSISHLGWMAVIIAYSPKLALLN---------------FYLYVVMTAAVfltlNTIKTLNLSTLMTT 233
Cdd:PRK07363 289 AIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGavaqmishglilallFHLVGIVERKV----GTRDLDVLNGLMNP 364
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 189035543 234 WAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQELVNQEMAPTATIIALLSLLGLFFYLRL 296
Cdd:PRK07363 365 IRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILL 427
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
59-291 |
1.34e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 43.57 E-value: 1.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 59 YFLVQAAASTLLLFSSMINAW-HTGQWDITQLTCPT-----SCVILTAAIAMKLGLAPFHFWFPEVLQGCSITTGLLLST 132
Cdd:PRK08667 166 FYFVMTQLSTVFLMLGIIVLFiQTGSFELSPLGASAgilslVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSG 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 133 AM-KFPPITLLYMTSQSLNPSM-----LTTMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAVIIAY--------SP 198
Cdd:PRK08667 246 VMlKVAVYGLVRFLMDVLSPELwwgvlILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLyvifgvygLD 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 199 KLALLNF--YLYVVMTAAVFLTL---------NTIKTLNLSTLMTTWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK08667 326 TLALLALggALFHSLNHALFKSLlfltagsvvHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLY 405
|
250 260
....*....|....*....|....*
gi 189035543 268 QELVNQ-EMAPTATIIALLSLLGLF 291
Cdd:PRK08667 406 ESFFQSfSVADPLIKILLFSVLAIF 430
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-295 |
1.86e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 43.20 E-value: 1.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 13 LLLGSTITISSNHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAA------STLLLFSSMINAWHTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 87 TQLTCPTSCV---ILTAA-------IAMKLGLAPFHFWFPEV-LQGCSITTGLLLSTAMKFPPITLLYMTS-------QS 148
Cdd:PRK08676 191 TELAAHASLLspsVLGASflfifigFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaAE 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 149 LNPSMLTTMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAVIIAYSPKLALLNFYLYVVMTAAVFLTL--------N 220
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLffsagilhR 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 189035543 221 TIKTLNLSTLMTTWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQELVNQEMAPTATIIALLSLLG---LFFYLR 295
Cdd:PRK08676 351 QYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAAssfAIFLLK 428
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-266 |
2.66e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 42.76 E-value: 2.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 55 AATKYFLVQAAASTLLLFSSMINAWHTG-------QWDITQLTCPTSCVILTA---AIAMKLGLAPFHFWFPEVLQGCSI 124
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGassfdyePLRSHTLPLSTQLLLLAPilvGFGIKIPLVPFHTWLPDAHVEAST 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 125 TTGLLLS-TAMKFPPITLL------YMTSQSLNPSMLTTMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAVIIAYS 197
Cdd:PRK06473 238 PVSVLLAgVLLKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAA 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 198 PKLALLNFYLYVV----MTAAVFLTLNTI--KTLN-----LSTLMTTWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK06473 318 TPLSILAAVFQMIshglISALLFLLVGVVykKTGSrdvdvLRGLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEFLV 397
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
13-296 |
3.18e-04 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 42.45 E-value: 3.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 13 LLLGSTITISSNHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSMINAWHTGQWDITQLTC- 91
Cdd:PRK08377 117 LMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQl 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 92 -----PTSCVILTAAIAMKLG----LAPFHFWFPEVLQGC----SITTGLLLSTAMKFPPITLLYMTSQSLNPS----ML 154
Cdd:PRK08377 197 agtidPTVAQVGLALLIFGLAveaeLFPLNAWAPDAYQAAphpiTVMFSAFVVKAGLYAMARILYLMQNANGWSsvlkLV 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 155 TTMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAVIIAYSPKL----ALLNFYLYVVMTAAVFLTLN----TIKTLN 226
Cdd:PRK08377 277 IIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAgvdaGVFHMINHAIVKALLFLAVGyvgiTLGGTE 356
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 227 LSTLMTTWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQELVNQEMAPTATIIALLSLLGLFFYLRL 296
Cdd:PRK08377 357 IEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
152-268 |
2.61e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 39.75 E-value: 2.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 152 SMLTTMALLSAalggwmgLNQTQTRKILAFSSISHLGWMAVIIAYS-PKLALLNFYLYVVMTAAVFLTLNTI-----KTL 225
Cdd:MTH00207 251 SLTMLMAGLSA-------MTECDMKKIIALSTLSQLGVMMASLGLGmPKLALFHLITHALFKALLFVCAGSLihshhHSQ 323
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 189035543 226 NLSTLMTTWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00207 324 DLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILE 366
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
152-298 |
2.82e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 39.63 E-value: 2.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 152 SMLTTMALLSAalggwmgLNQTQTRKILAFSSISHLGWMAVIIAY-SPKLALLNFYLYVVMTAAVFLTLNTI-----KTL 225
Cdd:MTH00209 247 SLTTLMASMSA-------NVESDLKKIIALSTLSQLGLMMCSLGLnQPELAFFHLITHALFKALLFICAGNIihshgHSQ 319
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 189035543 226 NLSTLMTTWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQELVNQEMAPTATIIALLSL-LGLFFYLRLAY 298
Cdd:MTH00209 320 DIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTsLTAAYSMRLSY 393
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-290 |
3.51e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 39.24 E-value: 3.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 55 AATKYFLVQAAASTLLLFSSMINAWHTGQ--WDITQLTC---PTSCVILT-----AAIAMKLGLAPFHFWFPEVLQGCSI 124
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAksyPLALELLLyagflIAFGVKLPIFPLHTWLPDAHGEASA 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 125 TTGLLLSTamkfppiTLLYMTSQSL---NPSMLT----TMALLSAALGG----WMGLN---QTQTRKILAFSSISHLGWM 190
Cdd:PRK12561 218 PVSMILAG-------VLLKMGGYALirfNVQMLPdahvYFAPALAILGVvniiYGALNafaQDNVKRRLAYSSVSHMGFV 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 191 AVIIAYSPKL----ALLNFYLYVVMTAAVFL----TLNTIKTL---NLSTLMTTWAKTPALsaMLMLTLLSLAgLPPLTG 259
Cdd:PRK12561 291 LLGIAAFTDLgisgAMLQMISHGLIAAALFFltgvTYERTHTLsipNMGGLAKVMPKTFAL--FTASSMASLA-LPGMSG 367
|
250 260 270
....*....|....*....|....*....|...
gi 189035543 260 FLPKWLIIQELVNQEMAPTA--TIIALLSLLGL 290
Cdd:PRK12561 368 FVSELTVFLGITSSDVYSSTfrTITILLAAVGL 400
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
15-270 |
4.77e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 38.62 E-value: 4.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 15 LGSTITISSNHWIM---AWTGLEINTLAILPLISKSHHPRAIeaatkyFLVQAAASTLLLFSSMINAWH-TGQWDITQLT 90
Cdd:PRK06459 83 LGMAIVLTSDNYLLflaGWEIMTIPSYVAIALTKKNKRPAFV------FMAFGELSTVLILAGFAWAFIiSGTTNFSYLP 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 91 CPTSCVILTAAIAMKLGLAPFHF--WFPEVLQGCSITTGLLLSTAMKFPPI-TLLYMTSQSLNPS------MLTTMALLS 161
Cdd:PRK06459 157 SPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVyGILKMTILTQTIPigyfglTILAIGAFS 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 162 AALGGWMGLNQTQTRKILAFSSISHLGWM-----AVIIAYSPKLALLNFYLYVVMTAA---------VFLTLNTIKTLNL 227
Cdd:PRK06459 237 ILFGALYAYVSENVKGLLAFSTIENNGAIlvalgLYMVTKQLITSIEHFSLITVILYSfahsvaktgLFLSSGLQEKQSI 316
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 189035543 228 STLMTTWAKTPALSAMLMLtlLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK06459 317 TYSKKIRNRWIELGLTLLA--SSLSGLLPNIGGVASWLLLESL 357
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
164-286 |
5.75e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 38.63 E-value: 5.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189035543 164 LGGWMGLNQTQTRKILAFSSISHLGWMAVIIAYSPKLALLnfylyvvmtAAVFLTLN--TIK---------------TLN 226
Cdd:PRK12648 284 LGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSPLAAV---------AAIFHIINhaTFKaslfmaagiidhetgTRD 354
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 189035543 227 LSTLMTTWAKTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQELVNQEMAPT--------ATIIALLS 286
Cdd:PRK12648 355 MRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMFFAETLDTHLLGSldwllpvaATLAGAFS 422
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
240-290 |
6.83e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 38.29 E-value: 6.83e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 189035543 240 LSAMLMLTLLSLAGLPPLTGFLPKWLIIQELVNQEMAPTA-TIIALLSLLGL 290
Cdd:PRK12666 393 LGLLFFICALALAGLPPLSGFLGKFALLQALLNPPGAGAAwWLWALVLLSGL 444
|
|
| |
