|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 789.62 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 1 MANLRKSHPLLKIANNALVDLPAPINISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDITTAFSSVAHICRDVNYGWLIR 80
Cdd:MTH00131 1 MASLRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 81 NMHANGASFFFICIYLHVGRGMYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNTL 160
Cdd:MTH00131 81 NLHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 161 VQWIWGGFSVDNATLTRFLAFHFLLPFIIAAVTLVHLIFLHETGSNNPIGLNSDADKISFHPYFSYKDLLGFAFLLTTLI 240
Cdd:MTH00131 161 VQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALT 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 241 ALALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMIVPLLHTSKQRSLTFRPL 320
Cdd:MTH00131 241 SLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPL 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 226354741 321 TQTLFWLLVADVLILTWIGGMPVEHPFIIIGQLASLLYFSLFLILSPTTAWLENKIFG 378
Cdd:MTH00131 321 TQFLFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALE 378
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
11-373 |
1.11e-128 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 374.90 E-value: 1.11e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 11 LKIANNALVDLPAPINISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDITTAFSSVAHICRDVNYGWLIRNMHANGASFF 90
Cdd:COG1290 20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 91 FICIYLHVGRGMYYGSylYKE----TWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNTLVQWIWG 166
Cdd:COG1290 100 FAAVYLHMFRGFFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFG 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 167 GFSVDNATLTRFLAFH-FLLPFIIAAVTLVHLIFLHETGSNNPIG----LNSDADKISFHPYFSYKDLLGFAFLLTTLIA 241
Cdd:COG1290 178 GEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFAL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 242 LALFSPNllGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALLASILVLMIVPLLHTSKQRSLTFRP 319
Cdd:COG1290 258 LAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRP 335
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 226354741 320 LTQTLFWLLVADVLILTWIGGMPVehPFIIIGQLASLLYFSLFLILSPTTAWLE 373
Cdd:COG1290 336 VRTALGVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
9-206 |
4.20e-95 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 282.33 E-value: 4.20e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 9 PLLKIANNALVDLPAPINISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDITTAFSSVAHICRDVNYGWLIRNMHANGAS 88
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 89 FFFICIYLHVGRGMYYGSY--LYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNTLVQWIWG 166
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 226354741 167 GFSVDNATLTRFLAFHFLLPFIIAAVTLVHLIFLHETGSN 206
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
18-204 |
7.96e-87 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 260.78 E-value: 7.96e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 18 LVDLPAPINISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDITTAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLH 97
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 98 VGRGMYYG--SYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNTLVQWIWGGFSVDNATL 175
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 226354741 176 TRFLAFHFLLPFIIAAVTLVHLIFLHETG 204
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
258-339 |
4.54e-10 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 57.88 E-value: 4.54e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 258 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMIVPLLHTSKQRSLTF-RPLTQTLFWLlvaDVLILT 336
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFrRPVATTVFLF---GTVVAL 141
|
...
gi 226354741 337 WIG 339
Cdd:TIGR01156 142 WLG 144
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 789.62 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 1 MANLRKSHPLLKIANNALVDLPAPINISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDITTAFSSVAHICRDVNYGWLIR 80
Cdd:MTH00131 1 MASLRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 81 NMHANGASFFFICIYLHVGRGMYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNTL 160
Cdd:MTH00131 81 NLHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 161 VQWIWGGFSVDNATLTRFLAFHFLLPFIIAAVTLVHLIFLHETGSNNPIGLNSDADKISFHPYFSYKDLLGFAFLLTTLI 240
Cdd:MTH00131 161 VQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALT 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 241 ALALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMIVPLLHTSKQRSLTFRPL 320
Cdd:MTH00131 241 SLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPL 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 226354741 321 TQTLFWLLVADVLILTWIGGMPVEHPFIIIGQLASLLYFSLFLILSPTTAWLENKIFG 378
Cdd:MTH00131 321 TQFLFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALE 378
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
3-376 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 724.38 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 3 NLRKSHPLLKIANNALVDLPAPINISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDITTAFSSVAHICRDVNYGWLIRNM 82
Cdd:MTH00119 4 NLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 83 HANGASFFFICIYLHVGRGMYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNTLVQ 162
Cdd:MTH00119 84 HANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVE 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 163 WIWGGFSVDNATLTRFLAFHFLLPFIIAAVTLVHLIFLHETGSNNPIGLNSDADKISFHPYFSYKDLLGFAFLLTTLIAL 242
Cdd:MTH00119 164 WIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTL 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 243 ALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMIVPLLHTSKQRSLTFRPLTQ 322
Cdd:MTH00119 244 ALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQ 323
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 226354741 323 TLFWLLVADVLILTWIGGMPVEHPFIIIGQLASLLYFSLFLILSPTTAWLENKI 376
Cdd:MTH00119 324 LLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALENKM 377
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-376 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 707.60 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 1 MANLRKSHPLLKIANNALVDLPAPINISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDITTAFSSVAHICRDVNYGWLIR 80
Cdd:MTH00074 2 AHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 81 NMHANGASFFFICIYLHVGRGMYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNTL 160
Cdd:MTH00074 82 NIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 161 VQWIWGGFSVDNATLTRFLAFHFLLPFIIAAVTLVHLIFLHETGSNNPIGLNSDADKISFHPYFSYKDLLGFAFLLTTLI 240
Cdd:MTH00074 162 VQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALA 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 241 ALALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMIVPLLHTSKQRSLTFRPL 320
Cdd:MTH00074 242 LLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPL 321
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 226354741 321 TQTLFWLLVADVLILTWIGGMPVEHPFIIIGQLASLLYFSLFLILSPTTAWLENKI 376
Cdd:MTH00074 322 TQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKL 377
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-377 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 702.55 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 1 MANLRKSHPLLKIANNALVDLPAPINISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDITTAFSSVAHICRDVNYGWLIR 80
Cdd:MTH00100 1 MTNIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 81 NMHANGASFFFICIYLHVGRGMYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNTL 160
Cdd:MTH00100 81 YLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 161 VQWIWGGFSVDNATLTRFLAFHFLLPFIIAAVTLVHLIFLHETGSNNPIGLNSDADKISFHPYFSYKDLLGFAFLLTTLI 240
Cdd:MTH00100 161 VEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 241 ALALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMIVPLLHTSKQRSLTFRPL 320
Cdd:MTH00100 241 LLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPL 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 226354741 321 TQTLFWLLVADVLILTWIGGMPVEHPFIIIGQLASLLYFSLFLILSPTTAWLENKIF 377
Cdd:MTH00100 321 SQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLL 377
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
4-367 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 671.63 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 4 LRKSHPLLKIANNALVDLPAPINISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDITTAFSSVAHICRDVNYGWLIRNMH 83
Cdd:MTH00191 1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 84 ANGASFFFICIYLHVGRGMYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNTLVQW 163
Cdd:MTH00191 81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 164 IWGGFSVDNATLTRFLAFHFLLPFIIAAVTLVHLIFLHETGSNNPIGLNSDADKISFHPYFSYKDLLGFAFLLTTLIALA 243
Cdd:MTH00191 161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 244 LFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMIVPLLHTSKQRSLTFRPLTQT 323
Cdd:MTH00191 241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 226354741 324 LFWLLVADVLILTWIGGMPVEHPFIIIGQLASLLYFSLFLILSP 367
Cdd:MTH00191 321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFP 364
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
11-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 644.14 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 11 LKIANNALVDLPAPINISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDITTAFSSVAHICRDVNYGWLIRNMHANGASFF 90
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 91 FICIYLHVGRGMYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNTLVQWIWGGFSV 170
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 171 DNATLTRFLAFHFLLPFIIAAVTLVHLIFLHETGSNNPIGLNSDADKISFHPYFSYKDLLGFAFLLTTLIALALFSPNLL 250
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 251 GDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMIVPLLHTSKQRSLTFRPLTQTLFWLLVA 330
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*
gi 226354741 331 DVLILTWIGGMPVEHPFIIIGQLASLLYFSLFLIL 365
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
4-377 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 628.27 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 4 LRKSHPLLKIANNALVDLPAPINISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDITTAFSSVAHICRDVNYGWLIRNMH 83
Cdd:MTH00034 4 LRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 84 ANGASFFFICIYLHVGRGMYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNTLVQW 163
Cdd:MTH00034 84 ANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQW 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 164 IWGGFSVDNATLTRFLAFHFLLPFIIAAVTLVHLIFLHETGSNNPIGLNSDADKISFHPYFSYKDLLGFAFLLTTLIALA 243
Cdd:MTH00034 164 IWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 244 LFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMIVPLLHTSKQRSLTFRPLTQT 323
Cdd:MTH00034 244 LLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQI 323
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 226354741 324 LFWLLVADVLILTWIGGMPVEHPFIIIGQLASLLYFSLFLILSPTTAWLENKIF 377
Cdd:MTH00034 324 AFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLENKLI 377
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
4-377 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 618.46 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 4 LRKSHPLLKIANNALVDLPAPINISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDITTAFSSVAHICRDVNYGWLIRNMH 83
Cdd:MTH00145 5 LRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLH 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 84 ANGASFFFICIYLHVGRGMYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNTLVQW 163
Cdd:MTH00145 85 ANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 164 IWGGFSVDNATLTRFLAFHFLLPFIIAAVTLVHLIFLHETGSNNPIGLNSDADKISFHPYFSYKDLLGFAFLLTTLIALA 243
Cdd:MTH00145 165 VWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLV 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 244 LFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMIVPLLHTSKQRSLTFRPLTQT 323
Cdd:MTH00145 245 LFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQV 324
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 226354741 324 LFWLLVADVLILTWIGGMPVEHPFIIIGQLASLLYFSLFLILsPTTAWLENKIF 377
Cdd:MTH00145 325 LFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLIL-PLVQKLWDNIL 377
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
4-377 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 582.02 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 4 LRKSHPLLKIANNALVDLPAPINISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDITTAFSSVAHICRDVNYGWLIRNMH 83
Cdd:MTH00016 5 MRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLH 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 84 ANGASFFFICIYLHVGRGMYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNTLVQW 163
Cdd:MTH00016 85 ANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 164 IWGGFSVDNATLTRFLAFHFLLPFIIAAVTLVHLIFLHETGSNNPIGLNSDADKISFHPYFSYKDLLGFAFLLTTLIALA 243
Cdd:MTH00016 165 LWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVV 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 244 LFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMIVPLLHTSKQRSLTFRPLTQT 323
Cdd:MTH00016 245 LLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQI 324
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 226354741 324 LFWLLVADVLILTWIGGMPVEHPFIIIGQLASLLYFSLFLILSPTTAWLENKIF 377
Cdd:MTH00016 325 LFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMINPLLMKLWDKLLK 378
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
4-377 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 534.67 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 4 LRKSHPLLKIANNALVDLPAPINISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDITTAFSSVAHICRDVNYGWLIRNMH 83
Cdd:MTH00022 3 LRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLH 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 84 ANGASFFFICIYLHVGRGMYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNTLVQW 163
Cdd:MTH00022 83 ANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQW 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 164 IWGGFSVDNATLTRFLAFHFLLPFIIAAVTLVHLIFLHETGSNNPIGLNSDADKISFHPYFSYKDLLGFAFLLTTLIALA 243
Cdd:MTH00022 163 VWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIV 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 244 LFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMIVPLLHTSKQRSLTFRPLTQT 323
Cdd:MTH00022 243 YFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRM 322
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 226354741 324 LFWLLVADVLILTWIGGMPVEHPFIIIGQLASLLYFSLFLILSPTTAWLENKIF 377
Cdd:MTH00022 323 AFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELENQLL 376
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
4-376 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 524.27 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 4 LRKSHPLLKIANNALVDLPAPINISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDITTAFSSVAHICRDVNYGWLIRNMH 83
Cdd:MTH00053 5 IRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLH 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 84 ANGASFFFICIYLHVGRGMYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNTLVQW 163
Cdd:MTH00053 85 ANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 164 IWGGFSVDNATLTRFLAFHFLLPFIIAAVTLVHLIFLHETGSNNPIGLNSDADKISFHPYFSYKDLLGFAFLLTTLIALA 243
Cdd:MTH00053 165 VWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIV 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 244 LFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMIVPLLHTSKQRSLTFRPLTQT 323
Cdd:MTH00053 245 FLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKI 324
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 226354741 324 LFWLLVADVLILTWIGGMPVEHPFIIIGQLASLLYFSLFLILSPTTAWLENKI 376
Cdd:MTH00053 325 LFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLENKL 377
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
4-376 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 518.32 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 4 LRKSHPLLKIANNALVDLPAPINISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDITTAFSSVAHICRDVNYGWLIRNMH 83
Cdd:MTH00224 5 FRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIH 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 84 ANGASFFFICIYLHVGRGMYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNTLVQW 163
Cdd:MTH00224 85 ANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 164 IWGGFSVDNATLTRFLAFHFLLPFIIAAVTLVHLIFLHETGSNNPIGLNSDADKISFHPYFSYKDLLGFAFLLTTLIALA 243
Cdd:MTH00224 165 IWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMV 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 244 LFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMIVPLLHTSKQRSLTFRPLTQT 323
Cdd:MTH00224 245 LFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQL 324
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 226354741 324 LFWLLVADVLILTWIGGMPVEHPFIIIGQLASLLYFSLFlILSPTTAWLENKI 376
Cdd:MTH00224 325 LFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYF-IISPAISKLWDDL 376
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
16-377 |
5.31e-141 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 405.86 E-value: 5.31e-141
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 16 NALVDLPAPINISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDITTAFSSVAHICRDVNYGWLIRNMHANGASFFFICIY 95
Cdd:MTH00033 13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 96 LHVGRGMYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNTLVQWIWGGFSVDNATL 175
Cdd:MTH00033 93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 176 TRFLAFHFLLPFIIAAVTLVHLIFLHETGSNNPIGLNSDADKISFHPYFSYKDLLGF--AFLLTTLIALALFSPNLLGDP 253
Cdd:MTH00033 173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFliLFGVFVIIGIEPRIETLLQDP 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 254 ENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMIVPLLHTSKQRSLTFRPLTQTLFWLLVADVL 333
Cdd:MTH00033 253 ENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFI 332
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 226354741 334 ILTWIGGMPV-EHPFIIIGQLASLLYFSLFLILSPTTAWLENKIF 377
Cdd:MTH00033 333 ILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYLSNLFY 377
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
11-373 |
1.11e-128 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 374.90 E-value: 1.11e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 11 LKIANNALVDLPAPINISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDITTAFSSVAHICRDVNYGWLIRNMHANGASFF 90
Cdd:COG1290 20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 91 FICIYLHVGRGMYYGSylYKE----TWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNTLVQWIWG 166
Cdd:COG1290 100 FAAVYLHMFRGFFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFG 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 167 GFSVDNATLTRFLAFH-FLLPFIIAAVTLVHLIFLHETGSNNPIG----LNSDADKISFHPYFSYKDLLGFAFLLTTLIA 241
Cdd:COG1290 178 GEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFAL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 242 LALFSPNllGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALLASILVLMIVPLLHTSKQRSLTFRP 319
Cdd:COG1290 258 LAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRP 335
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 226354741 320 LTQTLFWLLVADVLILTWIGGMPVehPFIIIGQLASLLYFSLFLILSPTTAWLE 373
Cdd:COG1290 336 VRTALGVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
15-365 |
5.38e-127 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 369.27 E-value: 5.38e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 15 NNALVDLPAPINISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDITTAFSSVAHICRDVNYGWLIRNMHANGASFFFICI 94
Cdd:MTH00086 4 NSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 95 YLHVGRGMYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNTLVQWIWGGFSVDNAT 174
Cdd:MTH00086 84 YLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSAT 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 175 LTRFLAFHFLLPFIIAAVTLVHLIFLHETGSNNPIGLNSDADKISFHPYFSYKDLLGFAFlLTTLIALALFSPNLLGDPE 254
Cdd:MTH00086 164 LKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIF-WLVFIIFSLFYPFNLGDPE 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 255 NFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMIVPLLHTSKQrslTFRPLTQTLFWLLVADVLI 334
Cdd:MTH00086 243 MFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNYTS---CLNKLNKFLVFSFIVVNVI 319
|
330 340 350
....*....|....*....|....*....|.
gi 226354741 335 LTWIGGMPVEHPFIIIGQLASLLYFSLFLIL 365
Cdd:MTH00086 320 LSWLGQCLVEYPFLFLSQIFSFIYFFLILLM 350
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
9-206 |
4.20e-95 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 282.33 E-value: 4.20e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 9 PLLKIANNALVDLPAPINISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDITTAFSSVAHICRDVNYGWLIRNMHANGAS 88
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 89 FFFICIYLHVGRGMYYGSY--LYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNTLVQWIWG 166
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 226354741 167 GFSVDNATLTRFLAFHFLLPFIIAAVTLVHLIFLHETGSN 206
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
10-364 |
5.55e-93 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 282.64 E-value: 5.55e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 10 LLKIANNALVDLPAPINISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDITTAFSSVAHICRDVNYGWLIRNMHANGASF 89
Cdd:MTH00046 1 MISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 90 FFICIYLHVGRGMYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNTLVQWIWGGFS 169
Cdd:MTH00046 81 LFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 170 VDNATLTRFLAFHFLLPFIIAAVTLVHLIFLHETGSNNPIGL-NSDADKISFHPYFSYKDLLGFAFLLTTLIALALFSPN 248
Cdd:MTH00046 161 VTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 249 LLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGvLALLASILVLMIVPllhtSKQRSLTFRPLTQTLFWLL 328
Cdd:MTH00046 241 LVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGG-LVLVLSFLFFLWVP----TFNGSSVYSVWRQVNFWLI 315
|
330 340 350
....*....|....*....|....*....|....*.
gi 226354741 329 VADVLILTWIGGMPVEHPFIIIGQLASLLYFSLFLI 364
Cdd:MTH00046 316 VSLFFSLSYLGGCHPEYPYLLISQLFSVLMVLLLFI 351
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
18-204 |
7.96e-87 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 260.78 E-value: 7.96e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 18 LVDLPAPINISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDITTAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLH 97
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 98 VGRGMYYG--SYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNTLVQWIWGGFSVDNATL 175
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 226354741 176 TRFLAFHFLLPFIIAAVTLVHLIFLHETG 204
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
207-354 |
6.84e-54 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 174.76 E-value: 6.84e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 207 NPIGLNSDADKISFHPYFSYKDLLGFAFLLTTLIALALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPN 286
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 226354741 287 KLGGVLALLASILVLMIVPLLHTSKQRSlTFRPLTQTLFWLLVADVLILTWIGGMPVEHPFIIIGQLA 354
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
258-358 |
5.19e-48 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 158.03 E-value: 5.19e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 258 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMIVPLLHTSKQRSLTFRPLTQTLFWLLVADVLILTW 337
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 226354741 338 IGGMPVEHPFIIIGQLASLLY 358
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
88-253 |
4.98e-47 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 157.79 E-value: 4.98e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 88 SFFFICIYLHVGRGMYYGSYLYKE--TWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNTLVQWIW 165
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 166 GGFSVDNATLTRFLAFHF-LLPFIIAAVTLVHLIFLHETGSNNPIGLNSDADKISFHPYFSYKDLLGFAFLLTTLIALAL 244
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 226354741 245 FSPNLLGDP 253
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
33-209 |
4.15e-39 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 139.08 E-value: 4.15e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 33 FGSLLGLCLIAQILTGLFLAMHYTSDITTAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLHVGRGMYYGSYLYKE- 111
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 112 -TWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNTLVQWIWGGFSVDNATLTRFLAFH-FLLPFII 189
Cdd:PRK03735 124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203
|
170 180
....*....|....*....|
gi 226354741 190 AAVTLVHLIFLHETGSNNPI 209
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
21-209 |
6.77e-32 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 119.83 E-value: 6.77e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 21 LPAPINIsaWWNFGSLLGLCLIAQILTGLFLAMHYTSDITTAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLHVGR 100
Cdd:CHL00070 26 VPPHVNI--FYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFR 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 101 GMYYGSYLYKE--TWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNTLVQWIWGGFSVDNATLTRF 178
Cdd:CHL00070 104 VYLTGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRF 183
|
170 180 190
....*....|....*....|....*....|..
gi 226354741 179 LAFH-FLLPFIIAAVTLVHLIFLHETGSNNPI 209
Cdd:CHL00070 184 YSLHtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
258-347 |
6.56e-11 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 60.19 E-value: 6.56e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 258 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMIVPLLHTSKQRSLTF-RPLTQTLFWLLVADVLILT 336
Cdd:COG5679 66 PADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENVNKFQNPFrRPVATAVFLFGTLVTLWLG 145
|
90
....*....|.
gi 226354741 337 WIGGMPVEHPF 347
Cdd:COG5679 146 IGAALPIDKSL 156
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
258-325 |
8.57e-11 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 60.02 E-value: 8.57e-11
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 226354741 258 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMIVPLLHTSKQRSLTF-RPLTQTLF 325
Cdd:CHL00058 65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLENVNKFQNPFrRPVATTVF 133
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
258-339 |
4.54e-10 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 57.88 E-value: 4.54e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 226354741 258 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILVLMIVPLLHTSKQRSLTF-RPLTQTLFWLlvaDVLILT 336
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFrRPVATTVFLF---GTVVAL 141
|
...
gi 226354741 337 WIG 339
Cdd:TIGR01156 142 WLG 144
|
|
| |
