|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-209 |
1.28e-132 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 380.01 E-value: 1.28e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 1 NPITETMAYPFLLLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLA 80
Cdd:MTH00110 251 NPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLA 330
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 81 NTNYERIHSRTMILARGLQTILPLMSAWWLLASLTNLALPPTINLIGELFIMLTSFYWSNITMLLMGTNVVITALYSLYM 160
Cdd:MTH00110 331 NSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNMLITALYSLYM 410
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 300487159 161 LITTQRGKYSYHVNTIKPTFTRENSLMALHMIPLLLLSINPKLILGTLY 209
Cdd:MTH00110 411 LITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-207 |
3.52e-103 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 305.20 E-value: 3.52e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 1 NPITETMAYPFLLLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLA 80
Cdd:MTH00124 251 PPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLA 330
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 81 NTNYERIHSRTMILARGLQTILPLMSAWWLLASLTNLALPPTINLIGELFIMLTSFYWSNITMLLMGTNVVITALYSLYM 160
Cdd:MTH00124 331 NTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLATLITASYTLYM 410
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 300487159 161 LITTQRGKYSYHVNTIKPTFTRENSLMALHMIPLLLLSINPKLILGT 207
Cdd:MTH00124 411 FLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-208 |
5.48e-97 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 289.51 E-value: 5.48e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 1 NPITETMAYPFLLLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLA 80
Cdd:MTH00068 251 TPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLA 330
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 81 NTNYERIHSRTMILARGLQTILPLMSAWWLLASLTNLALPPTINLIGELFIMLTSFYWSNITMLLMGTNVVITALYSLYM 160
Cdd:MTH00068 331 NTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYM 410
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 300487159 161 LITTQRGKYSYHVNTIKPTFTRENSLMALHMIPLLLLSINPKLILGTL 208
Cdd:MTH00068 411 FLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGMF 458
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-206 |
4.95e-78 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 241.01 E-value: 4.95e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 1 NPITETMAYPFLLLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLA 80
Cdd:MTH00127 252 DPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLA 331
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 81 NTNYERIHSRTMILARGLQTILPLMSAWWLLASLTNLALPPTINLIGELFIMLTSFYWSNITMLLMGTNVVITALYSLYM 160
Cdd:MTH00127 332 NTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYM 411
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 300487159 161 LITTQRGKYSYHVNTIKPTFTRENSLMALHMIPLLLLSINPKLILG 206
Cdd:MTH00127 412 FLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWG 457
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
1-204 |
2.85e-74 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 230.98 E-value: 2.85e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 1 NPITETMAYPFLLLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLA 80
Cdd:MTH00206 247 GPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLA 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 81 NTNYERIHSRTMILARGLQTILPLMSAWWLLASLTNLALPPTINLIGELFIMLTSFYWSNITMLLMGTNVVITALYSLYM 160
Cdd:MTH00206 327 NLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYM 406
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 300487159 161 LITTQRGKYSYHVNTIKPTFTRENSLMALHMIPLLLLSINPKLI 204
Cdd:MTH00206 407 FVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
2-205 |
2.06e-59 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 192.88 E-value: 2.06e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 2 PITETMAYPFLLLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLAN 81
Cdd:MTH00044 254 PSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLAN 333
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 82 TNYERIHSRTMILARGLQTILPLMSAWWLLASLTNLALPPTINLIGELFIMLTSFYWSNITMLLMGTNVVITALYSLYML 161
Cdd:MTH00044 334 ILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLATVFGAIYSLLIY 413
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 300487159 162 ITTQRGKYSYHVNTIKPTFTRENSLMALHMIPLLLLSINPKLIL 205
Cdd:MTH00044 414 QLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
9-205 |
5.70e-54 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 178.04 E-value: 5.70e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 9 YPFLLLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIH 88
Cdd:MTH00163 247 YIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANIIYERLG 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 89 SRTMILARGLQTILPLMSAWWLLASLTNLALPPTINLIGELFIMLTSFYWSNITMLLMGTNVVITALYSLYMLITTQRGK 168
Cdd:MTH00163 327 SRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYSYSQHGK 406
|
170 180 190
....*....|....*....|....*....|....*..
gi 300487159 169 YSYHVNTIKPTFTRENSLMALHMIPLLLLSINPKLIL 205
Cdd:MTH00163 407 YYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFM 443
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
14-204 |
1.22e-51 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 171.56 E-value: 1.22e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 14 LSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMI 93
Cdd:MTH00150 223 LSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLF 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 94 LARGLQTILPLMSAWWLLASLTNLALPPTINLIGELFI---MLTSFYWSNITMLLMgtnVVITALYSLYMLITTQRGKYS 170
Cdd:MTH00150 303 LSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLLSEIMIfpsLISYSPWFFVPLGLM---VFLSGLYSLYLYTSIQHGGSS 379
|
170 180 190
....*....|....*....|....*....|....
gi 300487159 171 YHVNTIKPTFTRENSLMALHMIPLLLLSINPKLI 204
Cdd:MTH00150 380 SFLKPFNELKSSEMLLLLLHWVPLLLLILKSDLL 413
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
11-204 |
1.07e-44 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 153.98 E-value: 1.07e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 11 FLLLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIHSR 90
Cdd:MTH00205 253 FFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSR 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 91 TMILARGLQTILPLMSAWWLLASLTNLALPPTINLIGELFIMLTSFYWSNITMLLMGTNVVITALYSLYMLITTQRGKYS 170
Cdd:MTH00205 333 SMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVS 412
|
170 180 190
....*....|....*....|....*....|....
gi 300487159 171 YHVNTIKPTFTRENSLMALHMIPLLLLSINPKLI 204
Cdd:MTH00205 413 SQISSFLAISEREYYILILHWFPLNILILKLKIF 446
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
3-204 |
2.73e-41 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 145.27 E-value: 2.73e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 3 ITETMAYPFLLLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLANT 82
Cdd:MTH00014 247 INKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSALFALANM 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 83 NYERIHSRTMILARGLQTILPLMSAWWLLASLTNLALPPTINLIGELFIMLTSFYWSNITMLLMGTNVVITALYSLYMLI 162
Cdd:MTH00014 327 TYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAYSLFLYT 406
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 300487159 163 TTQRGKYSYHVNTIKPTFTRENSLMALHMIPLLLLSINPKLI 204
Cdd:MTH00014 407 STQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLI 448
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
4-208 |
7.79e-38 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 136.36 E-value: 7.79e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 4 TETMAYPFLLLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLANTN 83
Cdd:COG1008 271 SAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVL 350
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 84 YERIHSRTMILARGLQTILPLMSAWWLLASLTNLALPPTINLIGELFIMLTSFYWSNITMLLMGTNVVITALYSLYMLit 163
Cdd:COG1008 351 YDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY-- 428
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 300487159 164 tQR---GKYSYHVNTIKPTFTRENSLMALHMIPLLLLSINPKLILGTL 208
Cdd:COG1008 429 -QRvffGPLKEELAELPDLNPRELAVLAPLAALILLLGLYPQPLLDLI 475
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
7-209 |
4.34e-33 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 123.51 E-value: 4.34e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 7 MAYPFLLLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLANTNYER 86
Cdd:TIGR01972 268 FAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYER 347
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 87 IHSRTMILARGLQTILPLMSAWWLLASLTNLALPPTINLIGELFIMLTSFYWSNITMLLMGTNVVITALYSLYMLITTQR 166
Cdd:TIGR01972 348 AHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFF 427
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 300487159 167 GKYS-YHVNTIKPTFTRENSLMALHMIPLLLLSINPKLILGTLY 209
Cdd:TIGR01972 428 GELSnPEVAEFPDLNGREIAVLAPLVVLILFLGLYPNPLLDLTE 471
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
2-148 |
4.25e-31 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 114.72 E-value: 4.25e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 2 PITETMAYPFLLLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLA- 80
Cdd:pfam00361 141 PSSPFIQQILLILAIISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAg 220
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 300487159 81 NTNYERIHSRTMILARGLQTILPLMSAWWLLASLTNLALPPTINLIGELFIMLTSFYWSNITMLLMGT 148
Cdd:pfam00361 221 SVIYRRVHTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGV 288
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
7-208 |
4.69e-31 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 118.00 E-value: 4.69e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 7 MAYPFLLLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLANTNYER 86
Cdd:PRK05846 276 FAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDR 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 87 IHSRTMILARGLQTILPLMSAWWLLASLTNLALPPTINLIGELFIMLTSFYWSNITMLLMGTNVVITALYSLYMLITTQR 166
Cdd:PRK05846 356 LHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMF 435
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 300487159 167 GKYSYHVNTIKPTFTRENSLMALHMIPLLLLSINPKLILGTL 208
Cdd:PRK05846 436 GPVKNEVAKLKDLNGRELLILLPLVALLLLLGVYPKPLLDVI 477
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
10-160 |
5.04e-27 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 107.06 E-value: 5.04e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 10 PFLL-LSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIH 88
Cdd:MTH00217 273 PLIQtLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHH 352
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 300487159 89 SRTMILARGLQTILPLMSAWWLLASLTNLALPPTINLIGELFIMLTSFYWSNITMLLMGTNVVITALYSLYM 160
Cdd:MTH00217 353 TRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
12-208 |
2.16e-26 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 105.15 E-value: 2.16e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 12 LLLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIHSRT 91
Cdd:MTH00204 279 VMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRL 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 92 MILARGLQTILPLMSAWWLLASLTNLALPPTINLIGELFIMLTSFYWSNITMLLMGTNVVITALYSLYMLITTQRGKYSY 171
Cdd:MTH00204 359 IKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSN 438
|
170 180 190
....*....|....*....|....*....|....*..
gi 300487159 172 HVNTIKPTFTRENSLMALHMIPLLLLSINPKLILGTL 208
Cdd:MTH00204 439 YLLFSRDLNRRELLAILPLIIAIFLLGIVPFIIIDLV 475
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
5-205 |
2.88e-24 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 99.23 E-value: 2.88e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 5 ETMAYPFLLLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLANTNY 84
Cdd:MTH00226 293 QNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILY 372
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 85 ERIHSRTMILARGLQTILPLMSAWWLLASLTNLALPPTINLIGELFIMLTSFYWSNITMLLMGTNVVITALYSLYMLITT 164
Cdd:MTH00226 373 DRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRV 452
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 300487159 165 QRGKYSYHVNTIKPTFTRENSLMALHMIPLLLLSINPKLIL 205
Cdd:MTH00226 453 TFGAPGNLITFARDVNRREFYITASMVFFAFLIGIYPIFIL 493
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
11-177 |
2.30e-17 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 79.18 E-value: 2.30e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 11 FLLLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIHSR 90
Cdd:MTH00094 216 WIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSR 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 91 TMILARGLQTILPLMSAWWLLASLTNLALPPTINLIGELFIMLTSFYWSNITMLLMGTNVVITALYSLYMLITTQRGKYS 170
Cdd:MTH00094 296 LIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKF 375
|
....*..
gi 300487159 171 YHVNTIK 177
Cdd:MTH00094 376 SNFNNFN 382
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
29-161 |
2.94e-17 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 79.31 E-value: 2.94e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 29 QTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMSAW 108
Cdd:PRK12561 272 QDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFAL 351
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 109 WLLASLTNLALPPTINLIGEL--FIMLTS--FYWSN---ITMLLMGTNVVITALYSLYML 161
Cdd:PRK12561 352 FTASSMASLALPGMSGFVSELtvFLGITSsdVYSSTfrtITILLAAVGLILTPIYLLSML 411
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
2-165 |
3.10e-15 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 73.26 E-value: 3.10e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 2 PITETMAYPFLLLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLAN 81
Cdd:COG0651 266 DPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAG 345
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 82 TNYERIHSRTMILARGLQTILPLMSAWWLLASLTNLALPPTINLIGELFIMLTSF----YWSNITMLLMGtnvVITALYS 157
Cdd:COG0651 346 AIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALeagaWLLAAVLLLSS---LLTLAYF 422
|
....*...
gi 300487159 158 LYMLITTQ 165
Cdd:COG0651 423 VRIFGRAQ 430
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
23-161 |
4.45e-15 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 72.81 E-value: 4.45e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 23 SSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGL---Q 99
Cdd:PRK06473 286 ASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpE 365
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 300487159 100 TILPLMSAWWLLASLTNLALPPTINLIGELFIMLTSFYWSNITMLLMGTNVVITALYSLYML 161
Cdd:PRK06473 366 RGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLV 427
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
19-161 |
6.34e-15 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 72.29 E-value: 6.34e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 19 MIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIhsRTMILAR-- 96
Cdd:CHL00011 288 IIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmg 365
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 300487159 97 GLQTILPLMSAWWLLASLTNLALPPTINLIGELFIMLT-------SFYWSNITMLLMGTNVVITALYSLYML 161
Cdd:CHL00011 366 GIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIVFFGiitsqkyLLMPKILITFVMAIGMILTPIYLLSML 437
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
29-161 |
1.54e-13 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 68.58 E-value: 1.54e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 29 QTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMSAW 108
Cdd:PRK02546 300 QRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAM 379
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 109 WLLASLTNLALPPTINLIGELFI---MLTSFYWSN----ITMLLMGTNVVITALYSLYML 161
Cdd:PRK02546 380 WTACSLASLALPGMSGFVAELMVfvgFATSDAYTLpfrvVVVFLAAVGVILTPIYLLSML 439
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
14-201 |
3.37e-11 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 61.65 E-value: 3.37e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 14 LSLWGMIMT---SSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIHSR 90
Cdd:PRK07363 274 LAIIGTISViygALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTR 353
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 91 TMILARGLQTI---LPLMSAWWLLASLTNLALPPTINLIGELFIMLTSFYWSNITMLLMGTNVVITALYSLYMLITTQRG 167
Cdd:PRK07363 354 DLDVLNGLMNPirgLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFG 433
|
170 180 190
....*....|....*....|....*....|....
gi 300487159 168 KYSYHVNTIKPTFTRENSLMALHMIPLLLLSINP 201
Cdd:PRK07363 434 RLDNKLAYYPKVLWSEKIPALILTALILFLGVQP 467
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
27-155 |
3.75e-11 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 61.48 E-value: 3.75e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 27 LRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMS 106
Cdd:PRK06458 300 LRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTG 379
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 300487159 107 AWWLLASLTNLALPPTINLIGELFIMLTSF---YWSNITMLLMGTNVVITAL 155
Cdd:PRK06458 380 WGLMLGALAIAGMPPFGVFISEFLILTAGLargPLLIAILLLLLLTLAFAAL 431
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-156 |
5.00e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 61.05 E-value: 5.00e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 4 TETMAYPFLLLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLANTN 83
Cdd:PRK08375 267 ALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAI 346
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 300487159 84 YERIHSRTMILARGLQTILPLMSAWWLLASLTNLALPPTINLIGELFIMLTSFY---WSNITMLLMGTnvVITALY 156
Cdd:PRK08375 347 EVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEagqWLVLAVLLASS--LLALLY 420
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-199 |
4.24e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 58.44 E-value: 4.24e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 11 FLLLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIHSR 90
Cdd:PRK12667 298 LIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTR 377
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 91 TMILARGLQTILPLMSAWWLLASLTNLALPPTINLIGELFI----MLTSFYWSNITMLLMGtnvVITALYSLYMLITTQR 166
Cdd:PRK12667 378 DIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLfnalLESGFYLPALVLLIAS---AISLVGYFRAWYSLFF 454
|
170 180 190
....*....|....*....|....*....|...
gi 300487159 167 GKYSYHVNTIKptftRENSLMALhmiPLLLLSI 199
Cdd:PRK12667 455 GKPKSGEEVEH----KESPSMSV---VILVLAL 480
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
11-127 |
1.74e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 53.77 E-value: 1.74e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 11 FLLLSLWG---MIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERI 87
Cdd:PRK12647 259 QTILPLFGgltMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHET 338
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 300487159 88 HSRTMILARGLQTILPLMSAWWLLASLTNLALPPTINLIG 127
Cdd:PRK12647 339 GTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLA 378
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-148 |
5.07e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 49.35 E-value: 5.07e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 11 FLLLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIHSR 90
Cdd:PRK12662 282 FMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTT 361
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 300487159 91 TMILARGLQTILPLMSAWWLLASLTNLALPPTINLIGELFIM---LTSFYWSNITMLLMGT 148
Cdd:PRK12662 362 KLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILdafIKSNAWIGLVVLLVGS 422
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
12-126 |
9.68e-07 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 48.50 E-value: 9.68e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 12 LLLSLWGM---IMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIH 88
Cdd:PRK12650 273 WLLIIVGMitaLMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAG 352
|
90 100 110
....*....|....*....|....*....|....*...
gi 300487159 89 SRTMILARGLQTILPLMSAWWLLASLTNLALPPTINLI 126
Cdd:PRK12650 353 TRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFV 390
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
19-199 |
1.07e-06 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 48.22 E-value: 1.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 19 MIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQtpwSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGL 98
Cdd:COG1009 286 ALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGL 362
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 99 QTILPLMSAWWLLASLTNLALPPTINLIG-ELFI--MLTSFYWSNITMLLMGTNVVITALYSLYMLITT----QRGKYSY 171
Cdd:COG1009 363 RKKMPITAITFLIGALSLAGIPPFAGFFSkEAILeaALEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVffgkPRPKTPK 442
|
170 180
....*....|....*....|....*...
gi 300487159 172 HVNTIKPTFTrenslmalhmIPLLLLSI 199
Cdd:COG1009 443 HPHESPWLMT----------LPLVVLAV 460
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
19-161 |
1.15e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 48.27 E-value: 1.15e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 19 MIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGL 98
Cdd:PRK06589 291 IFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGT 370
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 300487159 99 QTILPLMSAWWLLASLTNLALPPTINLIGELFIMLTSFYWSNITMLLMGTNVVI--TALYSLYML 161
Cdd:PRK06589 371 SKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLVVIasSILSALYLL 435
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
1-199 |
4.54e-06 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 46.51 E-value: 4.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 1 NPITETMAYPFLLLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQ---TPWSFMGATALMIAHGLTSSMLF 77
Cdd:PRK06525 265 GPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFF 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 78 CLANTNYERIHSRTMILARGLQTILPLMSAWWLLASLTNLALPPTINLIGELFIMLTSFYWSNITMLLMGTNVVITA--- 154
Cdd:PRK06525 345 LVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLLLIesv 424
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 300487159 155 ---LYSLYMLITTQRGKYSYHVNTIKPtftrENSLMALHMIPLLLLSI 199
Cdd:PRK06525 425 asfAWFLRWFGRVVFGEPSEAVADAAP----LPGSMKLVLIVLIVMSL 468
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
12-156 |
6.27e-06 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 45.91 E-value: 6.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 12 LLLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIHSRT 91
Cdd:PRK08377 277 IIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTE 356
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 300487159 92 MILARGLQTILPLMSAWWLLASLTNLALPPTINLIGELFIMLTS----FYWsnITMLLMGTNVVITALY 156
Cdd:PRK08377 357 IEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGlsagYTW--PVALVLGASVVEAVYY 423
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
27-135 |
8.45e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 42.43 E-value: 8.45e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 27 LRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLANTnYERIHSRTMILARGLQTILPLMS 106
Cdd:PRK08676 292 LSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGI-LHRQYRSDRFDRIFDVFRLQPVA 370
|
90 100 110
....*....|....*....|....*....|
gi 300487159 107 AWWL-LASLTNLALPPTINLIGELFIMLTS 135
Cdd:PRK08676 371 AWGViLGSAAIIGMPPFPLFLSKFFILLQL 400
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
6-77 |
1.96e-04 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 41.52 E-value: 1.96e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 300487159 6 TMAYPFLLLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLF 77
Cdd:PRK08668 270 LFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
27-206 |
2.50e-04 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 41.26 E-value: 2.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 27 LRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLF-CLANTNYERIHSRTMILARGLQTILPLM 105
Cdd:COG1007 288 LAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEIEDLAGLARRSPLL 367
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90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 106 sAWWLLASLTNLA-LPPTINLIGELFIML----TSFYWSNITMLLmgtNVVITALYSLYMLITTQRGKYSYHVNTIKPTF 180
Cdd:COG1007 368 -ALAMTIFLLSLAgIPPTAGFFGKFYVFSaaveAGLYWLAVIAVL---NSVISAYYYLRVVKAMYFDEPEEEAPISAPPG 443
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170 180
....*....|....*....|....*.
gi 300487159 181 TRenSLMALHMIPLLLLSINPKLILG 206
Cdd:COG1007 444 LR--VALVIAALLVLLLGIFPGPLLD 467
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| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
27-139 |
3.05e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 40.87 E-value: 3.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 27 LRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALM-----------IAHGLTSSMLFCLANTNYERIHSRTMILA 95
Cdd:PRK08667 289 LKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKM 368
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90 100 110 120
....*....|....*....|....*....|....*....|....
gi 300487159 96 RGLQTILPLMSAWWLLASLTNLALPPTINLIGELFImLTSFYWS 139
Cdd:PRK08667 369 GGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLL-YESFFQS 411
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| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
12-121 |
3.09e-04 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 40.79 E-value: 3.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300487159 12 LLLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLFCLANTNYERIHSRT 91
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90 100 110
....*....|....*....|....*....|
gi 300487159 92 MILARGLQTILPLMSAWWLLASLTNLALPP 121
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
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| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
12-77 |
3.10e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 41.06 E-value: 3.10e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 300487159 12 LLLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTSSMLF 77
Cdd:PRK12644 271 LVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALF 336
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
2-73 |
5.22e-03 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 37.11 E-value: 5.22e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 300487159 2 PITETMAYPFLLLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIIAILIQTPWSFMGATALMIAHGLTS 73
Cdd:PRK05777 264 GLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
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