|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
6.10e-172 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 481.63 E-value: 6.10e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 1 MNPHAKLTFIMSLLLGTTITISSNHWMMAWTGLEINTLAIIPLIAKSHHPRAIEATIKYFLVQAAASALVLFSSMTNAWA 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 81 TGQWDITQMTNPKSCLLLTTAIAMKLGLVPFHFWFPEVLQGSSMITALLLSTIMKLPPIAILVLVSHSINPTLLTIMAIA 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 161 STALGGWMGLNQTQTRKILAFSSISHLGWMAIIIAYNPNLTMLNFYLYAIMTATVFLTLNTTKTLKLSTMMTSWTKTPML 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 241 NAALMLTLLSLAGLPPLTGFMPKWLIIYDLTKQEMTATATLIAMLSLLGLFFYLRLAYYSTITLPPNSTNHMKQWHINKT 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 307829197 321 TNTLIAILTSLSMLLLPITPMILTTT 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-344 |
2.20e-144 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 411.51 E-value: 2.20e-144
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 1 MNPHAKLTFIMSLLLGTTITISSNHWMMAWTGLEINTLAIIPLIAKSHHPRAIEATIKYFLVQAAASALVLFSSMTNAWA 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 81 TGQWDITQMTNPKSCLLLTTAIAMKLGLVPFHFWFPEVLQGSSMITALLLSTIMKLPPIAILVLVSHSiNPTLLTIMAIA 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 161 STALGGWMGLNQTQTRKILAFSSISHLGWMAIIIAYNPNLTMLNFYLYAIMTATVFLTLNTTKTLKLSTMMTSWTKTPML 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 241 NAALMLTLLSLAGLPPLTGFMPKWLIIYDLTKQEMTATATLIAMLSLLGLFFYLRLAYYSTITLPPNSTNHMKQWHINKT 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*
gi 307829197 321 TNTL-IAILTSLSMLLLPITPMILT 344
Cdd:MTH00135 320 QLTLpLAISTTATLMLLPLTPAILA 344
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-344 |
4.43e-137 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 393.13 E-value: 4.43e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 1 MNPHAKLTFIMSLLLGTTITISSNHWMMAWTGLEINTLAIIPLIAKSHHPRAIEATIKYFLVQAAASALVLFSSMTNAWA 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 81 TGQWDITQMTNPKSCLLLTTAIAMKLGLVPFHFWFPEVLQGSSMITALLLSTIMKLPPIAILVLVSHSINPTLLTIMAIA 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 161 STALGGWMGLNQTQTRKILAFSSISHLGWMAIIIAYNPNLTMLNFYLYAIMTATVFLTLNTTKTLKLSTMMTSWTKTPML 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 241 NAALMLTLLSLAGLPPLTGFMPKWLIIYDLTKQEMTATATLIAMLSLLGLFFYLRLAYYSTITLPPNSTNHMKQWHINKT 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....
gi 307829197 321 TNTLIAILTSLSMLLLPITPMILT 344
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILN 344
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
3.57e-121 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 352.61 E-value: 3.57e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 1 MNPHAKLTFIMSLLLGTTITISSNHWMMAWTGLEINTLAIIPLIAKSHHPRAIEATIKYFLVQAAASALVLFSSMTNAWA 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 81 TGQWDITQMTNPKSCLLLTTAIAMKLGLVPFHFWFPEVLQGSSMITALLLSTIMKLPPIAILVLVSHSINPTLLTIMAIA 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 161 STALGGWMGLNQTQTRKILAFSSISHLGWMAIIIAYNPNLTMLNFYLYAIMTATVFLTLNTTKTLKLSTMMTSWTKTPML 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 241 NAALMLTLLSLAGLPPLTGFMPKWLIIYDLTKQEMTATATLIAMLSLLGLFFYLRLAYYSTITLPPnSTNHMK-QWHINK 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFP-STNNMKmKWQFEN 319
|
330 340
....*....|....*....|....*...
gi 307829197 320 T-TNTLIAILTSLSMLLLPITPMILTTT 346
Cdd:MTH00105 320 TkPMTLLPTLIILSTMLLPLTPMLSILE 347
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.74e-103 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 307.28 E-value: 2.74e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 1 MNPHAKLTFIMSLLLGTTITISSNHWMMAWTGLEINTLAIIPLIAKSHHPRAIEATIKYFLVQAAASALVLFSSMTNAWA 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 81 TGQWDITQMTNPKSCLLLTTAIAMKLGLVPFHFWFPEVLQGSSMITALLLSTIMKLPPIAILVLVSHSINPTLLTIMAIA 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 161 STALGGWMGLNQTQTRKILAFSSISHLGWMAIIIAYNPNLTMLNFYLYAIMTATVFLTLNTTKTLKLSTMMTSWTKTPML 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 241 NAALMLTLLSLAGLPPLTGFMPKWLIIYDLTKQEMTATATLIAMLSLLGLFFYLRLAYYSTITLPPNSTNHMKQWHINKT 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 307829197 321 TNTLIAILTSLSMLLLPITPMILTTT 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-336 |
1.13e-94 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 285.29 E-value: 1.13e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 1 MNPHAKLTFIMSLLLGTTITISSNHWMMAWTGLEINTLAIIPLIAKSHHPRAIEATIKYFLVQAAASALVLFSSMTNAWA 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 81 TGQWDITQMTNPKSCLLLTTAIAMKLGLVPFHFWFPEVLQGSSMITALLLSTIMKLPPIAILVLVSHSINPTLLTIMAIA 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 161 STALGGWMGLNQTQTRKILAFSSISHLGWMAIIIAYNPNLTMLNFYLYAIMTATVFLTLNTTKTLKLSTMMTSWTKTPML 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 241 NAALMLTLLSLAGLPPLTGFMPKWLIIYDLTKQEMTATATLIAMLSLLGLFFYLRLAYYSTITLPPNSTNHMKQWHINKT 320
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGN 320
|
330
....*....|....*.
gi 307829197 321 TNTLIAILTSLSMLLL 336
Cdd:MTH00041 321 ITVYGVILSILSSISI 336
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
1.14e-62 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 202.75 E-value: 1.14e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 1 MNPHAKLTFIMSLLLGTTITISSNHWMMAWTGLEINTLAIIPLIAKSHHPRAIEATIKYFLVQAAASALVLFSSMTNAWa 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 81 tgqwdITQMTNPKSCLLLTTAIAMKLGLVPFHFWFPEVLQGSSMITALLLSTIMKLPPiaiLVLVSHSINPTLLTIMAIA 160
Cdd:MTH00160 81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAP---LILLSYLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 161 STALGGWMGLNQTQTRKILAFSSISHLGWMAIIIAYNPNLTMLNFYLYAIMTATVFLTLNTTKTLKLSTMMTSWTKTPML 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 241 NAALMLTLLSLAGLPPLTGFMPKWLIIYDLTKQEMTATATLIAMLSLLGLFFYLRLAyYSTITLPPNSTNHMKQWHINKT 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRIS-YSSLMLNYNKNKWNLKKKKNKF 311
|
330 340
....*....|....*....|...
gi 307829197 321 TNTLIaILTSLSMLLLPITPMIL 343
Cdd:MTH00160 312 SLILN-FLSFISLFGLILSSLLF 333
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
5-302 |
1.85e-52 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 176.23 E-value: 1.85e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 5 AKLTFIMSLLLGTTITISSNHWMMAWTGLEINTLAIIPLIAKSHHPRAIEATIKYFLVQAAASALVLFSSMTNAWATGQW 84
Cdd:MTH00144 5 SNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 85 DITqmtnpkscLLLTTAIAMKLGLVPFHFWFPEVLQGSSMITALLLSTIMKLPPIAILVLVSHSINP-TLLTIMAIASTA 163
Cdd:MTH00144 85 FSM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVISVLSAL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 164 LGGWMGLNQTQTRKILAFSSISHLGWMAIIIAYNPNLTMLNFYLYAIMTATVFLTLNtTKTLKLSTMMTSWTKTPMLNAA 243
Cdd:MTH00144 157 VGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLW-SGDSGSMKDLGSLKPSYKTGLS 235
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 307829197 244 LMLTLLSLAGLPPLTGFMPKWLIIYDLTKQEMTATATLIAMLSLLGLFFYLRLAYYSTI 302
Cdd:MTH00144 236 IISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL 294
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
9-340 |
1.78e-47 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 163.41 E-value: 1.78e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 9 FIMSLLLGTTITISSNHWMMAWTGLEINTLAIIPLIAKSHHPRAIEATIKYFLVQAAASALVLFSSmtnawaTGQWDITQ 88
Cdd:MTH00011 11 FSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSFPS 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 89 MTNPKSCLLLTTAIAMKLGLVPFHFWFPEVLQGSSMITALLLSTIMKLPPIAILVLVSHSINPTLLTIMAIASTALGGWM 168
Cdd:MTH00011 85 LLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLG 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 169 GLNQTQTRKILAFSSISHLGWMAIIIAYNPNLTMLNFYLYAIMTATVFLTLNTTKTLKLSTMMTSWTKTPMLNAALMLTL 248
Cdd:MTH00011 165 GMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIML 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 249 LSLAGLPPLTGFMPKWLIIYDLTKQEMTATATLIAMLSLLGLFFYLRLAyYSTITLPPNSTNHMKQWHINKTtntliAIL 328
Cdd:MTH00011 245 LSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLI-FNFMYLSPTFSSLKSAPYEPKT-----KIL 318
|
330
....*....|..
gi 307829197 329 TSLSMLLLPITP 340
Cdd:MTH00011 319 ISMCTLSLGLIP 330
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
9-302 |
3.17e-43 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 151.75 E-value: 3.17e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 9 FIMSLLLGTTITISSNHWMMAWTGLEINTLAIIPLIAKSHHPRAIEATIKYFLVQAAASALVLFSSMTNAwatgqwdITQ 88
Cdd:MTH00197 3 FLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSF-------SNL 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 89 MTNPKSCLLLTTAIAMKLGLVPFHFWFPEVLQGSSMITALLLSTIMKLPPIAILVLVSHsiNPTLLTIMAIASTALGGWM 168
Cdd:MTH00197 76 YLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSS--SFMGLLICSVLSSLIGGIG 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 169 GLNQTQTRKILAFSSISHLGWMAIIIAYNPNLTMLNFYLYAIMTATVFLTLNTTKTLKLSTMMTSWTKTPMLNAALMLTL 248
Cdd:MTH00197 154 GMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSF 233
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 307829197 249 LSLAGLPPLTGFMPKWLIIYDLTKQEMTATATLIAMLSLLGLFFYLRLAYYSTI 302
Cdd:MTH00197 234 LSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLI 287
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-299 |
8.24e-39 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 143.33 E-value: 8.24e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 14 LLGTTITISSNHWMMAWTGLEINTLAIIPLIA-KSHHPRAIEATIKYFLVQAAASALVLF-SSMTNAwATGQWDITQM-- 89
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYG-ATGSLNLAGIaa 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 90 ---TNPKSCLLLTTAIAM-------KLGLVPFHFWFPEVLQGSSMITALLLSTIMKLPPIAILVLVSHSINP-------T 152
Cdd:COG1007 191 alaAGGANSPLLLLGLVLvlaglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLVEAFPglaadwqL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 153 LLTIMAIASTALGGWMGLNQTQTRKILAFSSISHLGWMAI-IIAYNPN-LTMLNFYL--YAIMTATVFLTLNT-TKTLKL 227
Cdd:COG1007 271 LLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLgLAAGTPLgVSAALFYLlaYLFMNLGAFAVILLlSRKGGE 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 307829197 228 STMMTSW----TKTPMLNAALMLTLLSLAGLPPLTGFMPKWLIIYDLTKQEMTATATLIAMLSLLGLFFYLRLAYY 299
Cdd:COG1007 351 AEEIEDLaglaRRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVKA 426
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-299 |
2.70e-32 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 125.70 E-value: 2.70e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 14 LLGTTITISSNHWMMAWTGLEINTLAIIPLIA-KSHHPRAIEATIKYFLVQAAASALVLFSSMTNAWATGQWDITQMTNP 92
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 93 KS------------CLLLTTAIAMKLGLVPFHFWFPEVLQGSSMITALLLSTIMKLPPIAILVLVSHSINPTL------- 153
Cdd:PRK05777 193 LAdgsgnsllllfgLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLRLLVVAFGGLsedwqqv 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 154 LTIMAIASTALGGWMGLNQTQTRKILAFSSISHLGWMAI-IIAYNPN-LTMLNFYL--YAIMTATVF--LTLNTTKTlKL 227
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVgLAAGTAEgYSAVLFYLlaYLFMTLGAFgvISLLRRKG-GE 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 307829197 228 STMMTSWT----KTPMLNAALMLTLLSLAGLPPLTGFMPKWLIIYDLTKQEMTATATLIAMLSLLGLFFYLRLAYY 299
Cdd:PRK05777 352 AESISDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRVIKL 427
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
1.42e-31 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 121.68 E-value: 1.42e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 13 LLLGTTITISSNHWMMAWTGLEINTLAIIPLIA-KSHHPRAIEATIKYFLVQAAASALVLFS-------------SMTNA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIAqNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 79 WATGQWDITQMTNPKSCLLLTTAIAMKLGLVPFHFWFPEVLQGSSMITALLLSTIMKLPPIAILVLVSHSINptLLTIMA 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVN--ILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 159 IASTALGGWMGLNQTQTRKILAFSSISHLGWMAIIIAYNP----NLTMLNFYLYAIMTATVF---LTLNTTKTLKLSTMM 231
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFsiiLALNVYKNLIIEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 307829197 232 TSwTKTPMLNAALMLTLLSLAGLPPLTGFMPKWLIIYDLTKQEMTATATLIAMLSLLGLFFYLRL 296
Cdd:MTH00196 240 LS-RRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
10-296 |
1.48e-29 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 117.81 E-value: 1.48e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 10 IMSLLLGTTITISSNHWMMAWTGLEINTLAIIPLIA-KSHHPRAIEATIKYFLVQAAASALVLFSSMTNAWATGQWDI-- 86
Cdd:MTH00199 103 ILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqg 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 87 --TQMTNPKSCLLLTTAIAMKLGLVPFHFWFPEVLQGSSMITALLLSTIMKLPPIAILVLVSHSINPTLltIMAIASTAL 164
Cdd:MTH00199 183 inSILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVL--ICAVLSIIY 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 165 GGWMGLNQTQTRKILAFSSISHLGWMAIIIAYNPN----LTMLNFYLYAIMTATVF---LTLNTTKTLKLSTMMTSwTKT 237
Cdd:MTH00199 261 GAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFesiqASLIYMIIYVIMSICSFsiiLSLKLTKGLIVEVSGLS-RKN 339
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 307829197 238 PMLNAALMLTLLSLAGLPPLTGFMPKWLIIYDLTKQEMTATATLIAMLSLLGLFFYLRL 296
Cdd:MTH00199 340 PVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-297 |
4.50e-28 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 113.89 E-value: 4.50e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 14 LLGTTITISSNHWMMAWTGLEINTLAIIPLIA-KSHHPRAIEATIKYFLVQAAASALVLFSSMTNAWATGQWDITQMTNP 92
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 93 KSC------------LLLTTAIAMKLGLVPFHFWFPEVLQGSSMITALLLSTIMKLPPIAILVLVS-------HSINPTL 153
Cdd:TIGR01770 192 LSNgmlnisllllgiVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFlyilfgfSEAWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 154 LTIMAIASTALGGWMGLNQTQTRKILAFSSISHLGW--MAIIIAYNPNLTMLNFYL--YAIMTATVFLTL------NTTK 223
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYilIGLLAGTLEGIKAVLFYIfiYALMSLGAFGVLsllrsyKDEW 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 307829197 224 TLKLSTMMTSWTKTPMLNAALMLTLLSLAGLPPLTGFMPKWLIIYDLTKQEMTATATLIAMLSLLGLFFYLRLA 297
Cdd:TIGR01770 352 IEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
1.53e-27 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 109.33 E-value: 1.53e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 23 SNHWMMAWTGLEINTLAIIPLIA-KSHHPRAIEATIKYFLVQAAASALVLFSSMTNAWATGQWDITQMTNPKSC------ 95
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGyWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGglnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 96 -----LLLTTAIAMKLGLVPFHFWFPEVLQGSSM-ITALLLSTIMKLPPIAILVLVS--HSINPT---LLTIMAIASTAL 164
Cdd:pfam00361 81 llllfLLILVGFLFKSAQVPFHTWLPDAYEGAPTpVSALLAATLVKAGGYGLIRRSLlyLPSSPFiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 165 GGWMGLNQTQTRKILAFSSISHLGWMAIIIA----YNPNLTMLNFYLYAIMTATVFL-----TLNTTKTLKLSTMMTSWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGagtiYGIQAAIFHLLTHGLFSAGLFLcagsvIYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 307829197 236 KTPMLNAALMLTLLSLAGLPPLTGFMPKWLIIY 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
8-296 |
1.35e-24 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 103.30 E-value: 1.35e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 8 TFIMSLLLGTTITISSNHWMMAWTGLEINTLAIIPLIAKSHHPRAIEATIKYFLVQAAASALVLFSSMTNAWATGQWDIT 87
Cdd:COG0651 111 PLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMA 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 88 QMTNPKS----------CLLLTTAIAMKLGLVPFHFWFPEVL-QGSSMITALLLSTIMKLPPIAILVLVSHSINP----- 151
Cdd:COG0651 191 DLAARLAeldpglllaaFALLLVGFGIKAALFPLHFWLPDAYpAAPSPVSALLSGLLTKVGVYAILRVLTLLFGAdpalf 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 152 --TLLTIMAIASTALGGWMGLNQTQTRKILAFSSISHLGWMAIIIAYNPNLTMLNFYLY----AIMTATVFLT----LNT 221
Cdd:COG0651 271 lgTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHllnhALAKALLFLAagaiERA 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 307829197 222 TKTLKLSTMMTSWTKTPMLNAALMLTLLSLAGLPPLTGFMPKWLIIYDLTKQEMTATATLIAMLSLLGLFFYLRL 296
Cdd:COG0651 351 TGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
7-263 |
8.66e-20 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 90.06 E-value: 8.66e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 7 LTFIMSLLLGTTITISSNHWMMAWTGLEINTLAIIPLIAKSHHP-RAIEATIKYFLVQAAASALVLFS-SMTNAWATGQW 84
Cdd:CHL00049 114 LLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDvRSNEATMKYLLMGGASSSILVYGfSWLYGLSGGEI 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 85 DI---------TQMTNPKSCLL----LTTAIAMKLGLVPFHFWFPEVLQGSSMITALLLSTIMKLPPIAILVLVSHSINP 151
Cdd:CHL00049 194 ELqeivnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRIFDIPFY 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 152 T-------LLTIMAIASTALGGWMGLNQTQTRKILAFSSISHLGWMAI-IIAYNPN------LTMLNFYLYAIMTATVFL 217
Cdd:CHL00049 274 FssnewhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIgIIVGDSNdgyasmITYMLFYIFMNLGTFACI 353
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 307829197 218 TLNT--TKTLKLSTMMTSWTKTPMLNAALMLTLLSLAGLPPLTGFMPK 263
Cdd:CHL00049 354 VLFGlrTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
3-296 |
2.63e-19 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 88.76 E-value: 2.63e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 3 PHAKLTFIMSLLLGTTITISSNHWMMAWTGLEINTLAIIPLIAKSHHPRAI---------EATIKYFLVQAAASALVLFS 73
Cdd:MTH00198 187 PRSGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFG 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 74 SMTNAWATGQ--------------WDITQMTNPKSCLLLTTAIAMKLGLVPFHFWFPEVLQGSSMITALLLSTIMKLppI 139
Cdd:MTH00198 267 CALYFGFTGNegmlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--T 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 140 AILVLVSHSINPTLLTIMAIASTALGGWMGLNQTQTRKILAFSSISHLGWMAIIIAYNPNLTMLNFYLYAIM-------T 212
Cdd:MTH00198 345 VYILLTSLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTylvsalaS 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 213 ATVFLTL------------------NTTKTLKLSTMMTSWTKTPMLNAALMLTLLSLAGLPPLTGFMPKWLIIYDLTKQE 274
Cdd:MTH00198 425 FTVICTLeefgtrtptsrqrdgsfgNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIA 504
|
330 340
....*....|....*....|....*....
gi 307829197 275 MTATATLIAMLSLLGL-------FFYLRL 296
Cdd:MTH00198 505 FSSSLSIYYLVALFAIictcisaFYYIRI 533
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
3.97e-16 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 79.32 E-value: 3.97e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 50 PRAIEATIKYFLVQAAASALVLF-SSMTNAWATGQW---DITQMTNPKSCLLLTTA-------IAMKLGLVPFHFWFPEV 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGSTqlsAIALALITSPSLGLALAlvfviagIAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 119 LQGSSMITALLLSTIMKLP----PIAILVLVSHSINP---TLLTIMAIASTALGGWMGLNQTQTRKILAFSSISHLGWMA 191
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAgfalAIRLLVTAFPSFDEqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 192 I--IIAYNPNLTMLNFYL--YAIMT----ATVFLTLNTTKTLKLSTMMTSWTKTPMLNAALMLTLLSLAGLPPLTGFMPK 263
Cdd:PRK02504 317 IglVAGTEAGYASMVFYLlaYLFMNlgafACVILFSLRTGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
7.65e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 75.13 E-value: 7.65e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 33 LEINTLAIIPLIA-KSHHPRAIEATIKYFLVQAAASALVLFS---------SMTNAWATGQWDITQMTNPKSCL-LLTTA 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGiallygqygTLNMAYLAVKMSENPTVVAKIALaLFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 102 IAMKLGLVPFHFWFPEVL-QGSSMITALLL-STIMKLPPIA--ILVLVSHSINPT----LLTIMAIASTALGGWMGLNQT 173
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYpAAPSSISAMLLvIKQAGLYALArvLFSIYGPAINLAtvgwVIIILGCLTMFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 174 QTRKILAFSSISHLGWMAI-----IIAYNPNLT-----------MLNFYLYAIMTATVFLT----LNTTKTLKLSTMMTS 233
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMLLglgvgLAALGDPAMasygeialaggIYHIVNHALYKALLFLTagavIYETGTRNLNELGGL 389
|
250 260 270
....*....|....*....|....*....|...
gi 307829197 234 WTKTPMLNAALMLTLLSLAGLPPLTGFMPKWLI 266
Cdd:PRK08376 390 ARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-299 |
8.45e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 74.92 E-value: 8.45e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 33 LEINTLAIIPLIAKSHHPRAIEATIKYFLVQAAASALVLFS-SMTNAwATGQWDITQMTN--PKSCLLLT------TAIA 103
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGvGLLYG-VTGTLNMADLAGalAENPTVVTafgfvlLALA 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 104 MKLGLVPFHFWFPEVLQG-SSMITALLLSTIMKLPPIAILVL------VSHSINPTLLTIM---AIASTALGGWMGLNQT 173
Cdd:PRK08375 214 LKAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAVYALIRIyftvfgGDFRFALGLGWLLavlALLSMLVGSLAALGQD 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 174 QTRKILAFSSISHLGWMAIIIAYNPNLTMLN--FYL--YAIMTATVFLTLN----TTKTLKLSTMMTSWTKTPMLNAALM 245
Cdd:PRK08375 294 DVKRVLAYSTVSQMGYILLGLALLTPLALAAglLHLlhHALMKGALFLAAGaievTYGTRRLSELSGLGRRMPLTAAAFA 373
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 307829197 246 LTLLSLAGLPPLTGFMPKWLIIYDLTKQEMTATATLIAMLSLLGLFFYLRLAYY 299
Cdd:PRK08375 374 VASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYR 427
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-267 |
1.46e-13 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 71.27 E-value: 1.46e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 38 LAIIP---LIAKSHHPRAIEATIKYFLVQAAASALVLFSSMTNAWATGQW--DITQMTNPK--------SCLLLTTAIAM 104
Cdd:COG1008 142 LMLIPmyfLIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAAPlpltaqllLFLAFFIAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 105 KLGLVPFHFWFPEVLQGSSMITALLLSTIM-KLP-------PIAILVLVSHSINPTLLtIMAIASTALGGWMGLNQTQTR 176
Cdd:COG1008 222 KVPMFPFHTWLPDAHVEAPTAGSVLLAGVLlKMGgygllrfALPLFPEASAYFAPLLA-ALGVIGIIYGALVALAQTDLK 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 177 KILAFSSISHLGWMAI-IIAYNPN------LTMLNFylyAIMTATVFLTL----NTTKTLKLSTMMTSWTKTPMLNAALM 245
Cdd:COG1008 301 RLIAYSSVSHMGFVLLgIFALNPLglqgavLQMVSH---GLITAALFLLVgvlyDRTHTRDIADLGGLAKRMPVLAALFL 377
|
250 260
....*....|....*....|..
gi 307829197 246 LTLLSLAGLPPLTGFMPKWLII 267
Cdd:COG1008 378 LAALASLGLPGTSGFVGEFLVL 399
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
2-298 |
1.07e-11 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 65.79 E-value: 1.07e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 2 NPHAKLTFIMSLLLGTTITISSNHWMMAWTGLEINTLA---IIPLIAKshhpRAIEATIKYFLVQAAASALVLFSSMTNA 78
Cdd:PRK08668 96 NDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSsfmMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIY 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 79 WATGQWDITQMTNPKS-----------CLLLTTAIAMKLGLVPFHFWFPE-----------VLQG--SSMITALLLSTIM 134
Cdd:PRK08668 172 AKTGTFDFADISQGLIndtstgfalivFLFLLAFGVAKAGIFPLHVWAPDayseapqsfsaVLSGqlSKLGAYGFLLVLY 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 135 KLPPIAILVLVSHSINPTLLTIMAIA----STALGGWMGLNQTQTRKILAFSSISHLGWMAIIIAYNPNLT----MLNFY 206
Cdd:PRK08668 252 VLPGTKLFSEFGTYRGVPLFNYILAWlgniSIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGfaggLFHVF 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 207 LYAIMTATVFLTLNT----TKTLKLSTMMTSWTKTPMLNAALMLTLLSLAGLPPLTGFMPKWLIIYDLTKQEMTATATLI 282
Cdd:PRK08668 332 NHALFKGLFFLIFAAviyrTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMA 411
|
330
....*....|....*.
gi 307829197 283 AMLSLLGLFFYLRLAY 298
Cdd:PRK08668 412 FFGSIGSFLYVFRPLA 427
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-267 |
1.18e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 62.28 E-value: 1.18e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 33 LEINTLAIIPLIAKSHHPRAIEATIKYFLVQAAASALVLFSSMTNAWATGQWDIT--QMTNPKSCLLLTTAIAMKLGLVP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSglATADPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 111 FHFWFPEVLQGSSMITALLLSTIM---KLPPIAILVLVSHSINPtLLTIMAIASTALGGWMGLNQTQTRKILAFSSISHL 187
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVvkaGVFPLVRCALDVPGLDL-IVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQL 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 188 GWMAIIIAYNPnltmlnfyLYAIMTATVFLTLNTTKTLKLSTMMTSWTKTPMLNA---ALMLTLLSLAGLPPLTGFMPKW 264
Cdd:PRK07234 282 GFILAAPLVGG--------LYALAHGLVKSTLFLCAGALPSRNFTELISQMLGIGkwiPLTMASFSIAGFPLLAGFVSKV 353
|
...
gi 307829197 265 LII 267
Cdd:PRK07234 354 LTL 356
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-344 |
2.62e-10 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 61.49 E-value: 2.62e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 50 PRAIEATIKYFLVQAAASALVLFSSMTNAWATGQ-WDITQMTNPKSCLLLTT--------AIAMKLGLVPFHFWFPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGtFDLLELLNLPLPFGVQTwlflaffiAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 120 QGSSMITALLLSTIMKLPPIAILVLV------SHSINPTLLTIMAIASTALGGWMGLNQTQTRKILAFSSISHLGWMAII 193
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFLRFNlplfpdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLG 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 194 IAYNPNLTMLN--FYLYA--IMTATVFLTLNT----TKTLKLSTMMTSWTKTPMLNAALMLTLLSLAGLPPLTGFMPKWL 265
Cdd:TIGR01972 312 IFSFNELGISGavFQMIShgLITAALFLLVGVlyerAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFL 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 266 IIYDLTKqemtaTATLIAMLSLLGLFF---YLRLAYYSTITLPPNSTNHMKQWHINKTTNTLIAILTsLSMLLLPITPMI 342
Cdd:TIGR01972 392 ILLGSFK-----VNPVVAFLAALGIVLaaaYMLTLYKRVFFGELSNPEVAEFPDLNGREIAVLAPLV-VLILFLGLYPNP 465
|
..
gi 307829197 343 LT 344
Cdd:TIGR01972 466 LL 467
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-344 |
3.17e-09 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 58.12 E-value: 3.17e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 34 EINTLAIIPLIAKSHHPRAIEATIKYFLVQAAASALVLFSSMTNAWATGQWDITQM-----TNPKS------CLLLTTAI 102
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIhnallVNPTSpviyggLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 103 AMKLGLVPFHFWFPEVLQGSSMITALLLSTIMKLPPIAILVLV-----SHSINPTLLTIM---AIASTALGGWMGLNQTQ 174
Cdd:PRK06277 210 LYGSGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIfklfgGLSYFPSAQGVLialSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 175 TRKILAFSSISHLGWMAIIIAYNPNLTMLNFYLYA----IMTATVFL----TLNTTKTLKLSTMMTSWTKTPMLNAALML 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAinhvIYKSALFLgagiVSYRTKTSNLRKLGGLLPVMPVVAFMVLC 369
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 247 TLLSLAGLPPLTGFMPKWLIIYDLTKQEMTATATLIAMLSlLGLFFYLRLAYYSTITLPPNSTNHMKQWHINKTTNTLIA 326
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVS-IGTFVSMMKAFYLIYLKPKPEELEYKNKKVPKYAVFSLA 448
|
330
....*....|....*...
gi 307829197 327 ILTSLSmLLLPITPMILT 344
Cdd:PRK06277 449 VLTILC-IILGLFPDLVT 465
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
80-263 |
3.69e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 58.01 E-value: 3.69e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 80 ATGQWDITQM-TNPKSCLLLTTAIAM-------KLGLVPFHFWFPEVLQGSSMITALLLSTIM---------KLPPIAIL 142
Cdd:PRK12644 183 AAGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPGFAD 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 143 VLVSHsinPTLLtIMAIASTALGGWMGLNQTQTRKILAFSSISHLGWMAIIIAY-NPN-----LTMLnfYLYAIMTATVF 216
Cdd:PRK12644 263 VPVWR---PTVL-VLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIgTRDaalagLAML--LAHALFKAALF 336
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 307829197 217 LTL----NTTKTLKLSTMMTSWTKTPMLNAALMLTLLSLAGLPPLTGFMPK 263
Cdd:PRK12644 337 LVVgiidHSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
109-285 |
3.04e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 55.31 E-value: 3.04e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 109 VPFHFWFPEVLQGSSMITALLLSTIMKLPPIAILVLVSHSINPT-----LLTIMAIASTALGGWMGLNQTQTRKILAFSS 183
Cdd:PRK12647 212 FPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTplwqtILPLFGGLTMLTGALLAVRQTDLKLILAYST 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 184 ISHLGWMAIIIAYNPNLTMLNFYLY----AIMTATVFLTLNT----TKTLKLSTMMTSWTKTPMLNAALMLTLLSLAGLP 255
Cdd:PRK12647 292 VSALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAGIidheTGTRDITKLGGLRRAMPITAAAALLAALSMAGLP 371
|
170 180 190
....*....|....*....|....*....|
gi 307829197 256 PLTGFMPKWLIIYDLTKQEMTATATLIAML 285
Cdd:PRK12647 372 PLFGFLAKELIYEALLEAPLWSLILTVAAV 401
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
8-268 |
3.89e-08 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 54.55 E-value: 3.89e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 8 TFIMSLLLgttiTISSNHWMMAWTGLEINTLAIIPLIAKSHHPRAIEATIKYFLVQAAASALVLFSSMTNAWATGqwdiT 87
Cdd:PRK06458 116 LFLFTMLL----ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTILVYANAA----T 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 88 QMTNPKSCLLLTTAIAM----------------------KLGLVPFHFWFPEV-LQGSSMITALLLSTIMKLPPIAIL-- 142
Cdd:PRK06458 188 VMGDGEMAILWTELLKHaslldptlmklafvflligfgtKVGLFPMHAWLPDAhSEAPSPVSALLSGVLLNVALYAVLry 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 143 -VLVSHSINP----TLLTIMAIASTALGGWMGLNQTQTRKILAFSSISHLGWMAIIIAYNPNLTMLNFYLYAIM----TA 213
Cdd:PRK06458 268 yILIDAAIGSdfpgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNhsltKS 347
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 307829197 214 TVFLT----LNTTKTLKLSTMMTSWTKTPMLNAALMLTLLSLAGLPPLTGFMPKWLIIY 268
Cdd:PRK06458 348 AIFFAsgnvLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILT 406
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
95-298 |
5.77e-08 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 54.39 E-value: 5.77e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 95 CLLLTTAIAMKLGLVPFHFWFPEVLQGSSMITALLLSTIM---------KLPPIAILVlvshsinPTLLTIMAI--ASTA 163
Cdd:COG1009 214 LLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMvkagvyllaRLSPLFALS-------PVWLTVVAIigAITA 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 164 L-GGWMGLNQTQTRKILAFSSISHLGWMAIIIAYNPNLTMLnFYL--YAIMTATVFLT----LNTTKTLKLSTMMTSWTK 236
Cdd:COG1009 287 LfAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAAL-FHLltHAFFKALLFLGagsvIHATGTRDIRKMGGLRKK 365
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 307829197 237 TPMLNAALMLTLLSLAGLPPLTGFMPKWLIIYDLTKQEMTATATLIAML--SLLGLFFYLRLAY 298
Cdd:COG1009 366 MPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALlgAFLTAFYSFRLFF 429
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-340 |
1.64e-07 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 47.25 E-value: 1.64e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 307829197 291 FFYLRLAYYSTITLPPNSTNHMKQWHINKTTNT-LIAILTSLSMLLLPITP 340
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTlLLPTLTTLSILLLPLTP 51
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-266 |
1.86e-07 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 52.41 E-value: 1.86e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 55 ATIKYFLVQAAASALVLFSSMTNAWATGQWD------ITQMTNPKSCLLLTTAI----AMKLGLVPFHFWFPEVLQGSSM 124
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSfdydaiSTQNLSLNTQLILLTGLllgfGIKIPLVPLHTWLPDAYTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 125 ITALLLSTIM-KLPPIAILVL-------VSHSINPTLLTIMAIaSTALGGWMGLNQTQTRKILAFSSISHLGWMAIIIAY 196
Cdd:PRK07363 238 AVAILLGGVLaKLGTYGLLRFglqlfpqTWSLVAPGLAIIGTI-SVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAA 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 197 NPNLTMLN---------------FYLYAIMTATVfltlNTTKTLKLSTMMTSWTKTPMLNAALMLTLLSLAGLPPLTGFM 261
Cdd:PRK07363 317 GTQLSLLGavaqmishglilallFHLVGIVERKV----GTRDLDVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFV 392
|
....*
gi 307829197 262 PKWLI 266
Cdd:PRK07363 393 AEFIV 397
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-195 |
2.00e-07 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 52.45 E-value: 2.00e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 13 LLLGTTITISSNHWMMAWTGLEINTLAIIPLIAKSHHPRAIEATIKYFLVQAAA------SALVLFSSMTNAWATGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 87 TQMTNPK----------SCLLLTTAIAMKLGLVPFHFWFPEV-LQGSSMITALLLSTIMKLPPIAILVLVS-------HS 148
Cdd:PRK08676 191 TELAAHAsllspsvlgaSFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaAE 270
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 307829197 149 INPTLLTIMAIASTALGGWMGLNQTQTRKILAFSSISHLGWMAIIIA 195
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIG 317
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
98-263 |
8.32e-07 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 50.81 E-value: 8.32e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 98 LTTAIAM--------KLGLVPFHFWFPEVLQGSSMITALLLSTIMKLPPIAILVLVS--HSINPT---LLTIMAIASTAL 164
Cdd:PRK12650 206 LTTVVAVliavaaftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSpvFHDVAVwnwLLIIVGMITALM 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 165 GGWMGLNQTQTRKILAFSSISHLGWMAIIIAYNPNLTM----LNFYLYAIMTATVFLTL----NTTKTLKLSTMMTSWTK 236
Cdd:PRK12650 286 GAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALtaavVHTLAHALFKSSLFMLIgvvdHQAGTRDIRRLGSLWRR 365
|
170 180
....*....|....*....|....*..
gi 307829197 237 TPMLNAALMLTLLSLAGLPPLTGFMPK 263
Cdd:PRK12650 366 MPFTFVSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
13-296 |
1.24e-06 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 49.77 E-value: 1.24e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 13 LLLGTTITISSNHWMMAWTGLEINTLAIIPLIAKSHHPRAIEATIKYFLVQAAASALVLFSSMTNAWATGQWDITQ---- 88
Cdd:PRK08377 117 LMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHiaql 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 89 --MTNPKSCLLLTTAIAMKLG----LVPFHFWFPEVLQGSSM-ITALLLSTIMK--LPPIAILVLVSHSINP-----TLL 154
Cdd:PRK08377 197 agTIDPTVAQVGLALLIFGLAveaeLFPLNAWAPDAYQAAPHpITVMFSAFVVKagLYAMARILYLMQNANGwssvlKLV 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 155 TIMAIASTALGGWMGLNQTQTRKILAFSSISHLGWMAIIIAYNPNLT-------MLNfylYAIMTATVFLTLN----TTK 223
Cdd:PRK08377 277 IIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGvdagvfhMIN---HAIVKALLFLAVGyvgiTLG 353
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 307829197 224 TLKLSTMMTSWTKTPMLNAALMLTLLSLAGLPPLTGFMPKWLIIYDLTKQEMTATATLIAMLSLLGLFFYLRL 296
Cdd:PRK08377 354 GTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
96-335 |
1.56e-06 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 49.56 E-value: 1.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 96 LLLTTAIAMKLGLVPFhFWFPEVLQGSSMITALLLSTIMKLPPIAILVLVSHSINP-------TLLTIMAIASTALGGWM 168
Cdd:PRK12663 211 LLFLLAFGMKAALFPF-MWLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPqerellhPLLATMAAITMVIGALG 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 169 GLNQTQTRKILAFSSISHLGWMAIIIAYNpNLTMLN---FYLYAIMTATVFLTLNT------TKTLKLSTMMTSWTKTPM 239
Cdd:PRK12663 290 ALAYKDIRRIAGYQVISSIGFILLGLALG-TPAGINgaiFYLVHDMVVKTALFLIAgslvrlTGYRSLQYLGGLYRKEPL 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 240 LNAALMLTLLSLAGLPPLTGFMPKWLII---YDLTKQEMTATATLIAMLSLLGLFFYLRLAYYSTITLPPNSTNHMKQWH 316
Cdd:PRK12663 369 FGALFLILIFAIGGLPPFSGFWGKVLLVqgaLDNGAYILLALMLITSLITMYSLFRIFFLAYWGDKDGEEVNFKPIPLYR 448
|
250
....*....|....*....
gi 307829197 317 INkttntLIAILTSLSMLL 335
Cdd:PRK12663 449 KL-----PLSILAVVVIAM 462
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
33-288 |
2.31e-06 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 49.20 E-value: 2.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 33 LEINTLAIIPLIAKSHHPRAIEATIKYFLVQAAAS------ALVLFSSMTNAWATGQWDITQMTNPKSCLLLTTAIAMKL 106
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSlglylaAATLFLQTGTFALSALSGLHGSLKYLVFLGILFAAWGKS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 107 GLVPFHFWFPEVLQGSSMITALLLSTIMKLPPIAILVLVSHSINP------TLLTIMAIASTALGGWMGLNQTQTRKILA 180
Cdd:PRK06525 222 AQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPiphvigYVGAVMAIVTLLYGFLMYLPQQDMKRLLA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 181 FSSISHLGWMAIIIAYNP-------NLTMLNFYLYAIMTATVFLT-------LNTTKTLKLSTMMtswTKTPMLNAALML 246
Cdd:PRK06525 302 YSTITQLGYMFFGLSLAIlgsrlalEGSIAYIFNHAFAKSLFFLVagalsysCGTRLLPRLRGVL---KKLPLVGVGFCV 378
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 307829197 247 TLLSLAGLPPLTGFMPKWLIIYDLTKQEMTATATLIAMLSLL 288
Cdd:PRK06525 379 AALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLLL 420
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
111-267 |
5.11e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 48.03 E-value: 5.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 111 FHFWFPEVLQGSSMITALLLSTIMKLPPIAILV-----LVSHSINPTLLTIMAIASTALGGWMGLNQTQTRKILAFSSIS 185
Cdd:MTH00032 244 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIrsfplFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCS 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 186 HLGWMAIIIAY--NPNLTMLNFYLYAIMTATVFLTLN------TTKTLKLSTMMTSWTKTPMLNAALMLTLLSLAGLPPL 257
Cdd:MTH00032 324 QLGYMVLIIGIegSHNVGLFHLVNHAFFKALLFLSAGsvihstTVDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYL 403
|
170
....*....|
gi 307829197 258 TGFMPKWLII 267
Cdd:MTH00032 404 TGFYSKDLIL 413
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-263 |
1.22e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 46.89 E-value: 1.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 96 LLLTTAIAMKLGLVPFHFWFPEVL-QGSSMITALLLSTIMKLPPIAI-----LVLVSHSINpTLLTIMAIASTALGGWMG 169
Cdd:PRK12665 213 AVLLVAFGIKAAVFPLSFWLPDSYpTAPAPVTAVFAGLLTKVGVYAIirthtLLFPGGGLD-TLLMVVALLTMVVGILGA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 170 LNQTQTRKILAFSSISHLGWMAIIIAYNPNLTMLNFYLYAIMTATVFLTL--------NTTKTLKLSTMMTSWTKTPMLN 241
Cdd:PRK12665 292 IAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLflvvglieRQAGSSSLRRLGGLAKASPLLA 371
|
170 180
....*....|....*....|..
gi 307829197 242 AALMLTLLSLAGLPPLTGFMPK 263
Cdd:PRK12665 372 VLFFVPALNLGGIPPFSGFIGK 393
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
43-312 |
3.09e-05 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 45.58 E-value: 3.09e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 43 LIAKSHHPRAIEATIKYFLVQAAASALVLFSSMT----NAWATGQWDITQMTNPKSCLLLTT--------AIAMKLGLVP 110
Cdd:PRK05846 150 LIGVWGGKNRIYAATKFFLYTLLGSLLMLVAIIYlvvvYYNATGTFDIADLLNLPLPPGVQYwlflaffiAFAVKMPMFP 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 111 FHFWFPEVLQ-----GSSMITALLLST-------IMklppIAILVLVSHSINPtLLTIMAIASTALGGWMGLNQTQTRKI 178
Cdd:PRK05846 230 LHTWLPDAHVqaptaGSVLLAGILLKMgaygllrFS----LPLFPDASHEFAP-IIITLGVIAIIYGALVALAQTDIKKL 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 179 LAFSSISHLGWMAI-IIAYNPN------LTMLNfylYAIMTATVFLTLNT----TKTLKLSTMMTSWTKTPMLNAALMLT 247
Cdd:PRK05846 305 IAYSSISHMGFVTLgIFAGNQLgiqgaiFQMIS---HGLSSAALFLLVGVlydrLHTRDIADYGGLAKVMPVLAAFFLFF 381
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 307829197 248 LLSLAGLPPLTGFMPKWLIIYDLTKqemtaTATLIAMLSLLGLFF---YLRLAYYSTITLPPNSTNHM 312
Cdd:PRK05846 382 AMASLGLPGTSGFVGEFLILLGSFQ-----VNPVIAFIATTGLILaavYSLWLYQRVMFGPVKNEVAK 444
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-316 |
3.55e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 45.45 E-value: 3.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 95 CLLLTTAIAMKLGLVPFHFWFPEVLQGSSMITALLLSTIMKLPPIAILVLVS--HSINPTLL---TIMAIASTALGGWMG 169
Cdd:MTH00020 213 CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSplFEQAPLALiivTIVGSLTVFFAATVG 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 170 LNQTQTRKILAFSSISHLGWMAIIIAYNPNLTMLnFYL--YAIMTATVFLT--------LNTTKTLKLSTMMTSwtkTPM 239
Cdd:MTH00020 293 LVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISL-FHLmnHAFFKALLFLSagsvihalSDEQDMRKMGGLISF---LPL 368
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 307829197 240 LNAALMLTLLSLAGLPPLTGFMPKWLIIYDLTKQEMTATATLIAMLS-LLGLFFYLRLAYYSTITLPPNSTNHMKQWH 316
Cdd:MTH00020 369 TYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSaLLTAFYSIRLIYLTFLSNTNLKKAVFFHLH 446
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-296 |
4.34e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 44.94 E-value: 4.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 103 AMKLGLVPFHFWFPEVLQGSSM-ITALLLSTIMKLPPIAIL----VLVSHSINPTLLTIMAIAS-TALGGWMG-LNQTQT 175
Cdd:PRK07691 220 ATKAGLFPLYFWLPGSYYAPPIaIAALFGALLTKVGVYAIArtftLFFSHDTSFTHYLILILALlTIIFGVIGaVAYFDI 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 176 RKILAFSSISHLGWMAIIIAYNPNLTMLNFYLYA----IMTATVFL----TLNTTKTLKLSTMMTSWTKTPMLNAALMLT 247
Cdd:PRK07691 300 KKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLihdmIVKAALFLligiMIKITGTTDLKKMGGLIKRYPVLGWMFFIA 379
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 307829197 248 LLSLAGLPPLTGFMPKWLIIYDLTKQEMTATATLIAMLSLLGLFFYLRL 296
Cdd:PRK07691 380 ALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
82-344 |
6.11e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 44.76 E-value: 6.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 82 GQWDITQMT----NPKSCLLLTTAIAMKLGLVPFHFWFPEVLQGSSMITALLLSTIMKLPPIAILV-----LVSHSINPT 152
Cdd:MTH00207 165 GHWSITNMWqtdmNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIrfypfLSSTYWFNP 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 153 LLTIMAIASTALGGWMGLNQTQTRKILAFSSISHLGWMAIIIAYN-PNLTMLNFYLYAIMTATVFLTLNTT-----KTLK 226
Cdd:MTH00207 245 ALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGmPKLALFHLITHALFKALLFVCAGSLihshhHSQD 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 227 LSTMMTSWTKTPMLNAALMLTLLSLAGLPPLTGFMPKWLIIYDLTKQEMTATATLIAMLSLLGLFFYLRLAYYSTITLPP 306
Cdd:MTH00207 325 LRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPN 404
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 307829197 307 NSTNHMKQWHINKTTNTLIAILTSLS---------MLLLPITPMILT 344
Cdd:MTH00207 405 SSSPYHHLEDEDKSLTTPMLLLTLGAitsgsalnwWLPTPQEEPILP 451
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-267 |
7.65e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 44.34 E-value: 7.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 33 LEINTLAIIPLIAKSHHPRAIEATIKYFLVQAAASALVLFSSMTNAWATGQWDITQM-----------TNPKSCLLLTTA 101
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMfliiqdlptnrAIQIGVLFIMVG 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 102 IAMKLGLVPFHFWFPEVLQGSSMITALLLSTIMKLPPIAILVLVSHSINPT-----------LLTIMAIASTALGGWMGL 170
Cdd:PRK12662 219 LFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKAnfvfttlpfnnVFMILAALAIVFGSVLAI 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 171 NQTQTRKILAFSSISHLGWMAIIIAYNPNLTMLNFYLY----AIMTATVFLTLNTTK----TLKLSTMMTSWTKTPMLNA 242
Cdd:PRK12662 299 LSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSGSISyhfgTTKLEDCLNLWKSMPKITL 378
|
250 260
....*....|....*....|....*
gi 307829197 243 ALMLTLLSLAGLPPLTGFMPKWLII 267
Cdd:PRK12662 379 AFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
9.05e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 44.43 E-value: 9.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 48 HHPRAIEATIKYFLVQAAASALVLFSSMTNAWATGQWDITQMTNPKSCL--------------LLTTAIAMKLGLVPFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIenikghplflitliLIFIGAAAKSAQGPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 114 WFPEVLQGSSMITALLLSTIMKLPPIAILVLVSHSINPT-----LLTIMAIASTALGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 189 WMAIIIAYNP------NLTMLNFYL--YAIMTATVFLTLN-------TTKTLKLSTMMTSWTKTPMLNAalmLTLLSLAG 253
Cdd:PRK12649 316 YLMTMYGYTTyhepglGVAAATFHLlnHATFKACLFLVAGivaheaaTRDIRKLGGLRKEMPITFIVAS---IAALAMAG 392
|
250
....*....|
gi 307829197 254 LPPLTGFMPK 263
Cdd:PRK12649 393 IPPLNGFLSK 402
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
55-291 |
9.92e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 43.95 E-value: 9.92e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 55 ATIKYFLVQAAASALVLFSSMTNAWATGQWDITQMTNPK-----SCLLLTTAIAMKLGLVPFHFWFPEVLQGS-SMITAL 128
Cdd:PRK08667 163 AGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAgilslVFLLLFLGFGIKAGIIPFHKWLPYAHPASpSNVSAL 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 129 LLSTIMKLPPIAILVLVSHSINP-----TLLTIMAIASTALGGWMGLNQTQTRKILAFSSISHLGWMAIIIAY------- 196
Cdd:PRK08667 243 MSGVMLKVAVYGLVRFLMDVLSPelwwgVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLyvifgvy 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 197 -NPNLTMLNF-------YLYAIMTATVFLT----LNTTKTLKLSTMMTSWTKTPMLNAALMLTLLSLAGLPPLTGFMPKW 264
Cdd:PRK08667 323 gLDTLALLALggalfhsLNHALFKSLLFLTagsvVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASEL 402
|
250 260
....*....|....*....|....*...
gi 307829197 265 LIIYDLTKQEMTATATL-IAMLSLLGLF 291
Cdd:PRK08667 403 LLYESFFQSFSVADPLIkILLFSVLAIF 430
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
79-190 |
1.20e-04 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 43.86 E-value: 1.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 79 WATGQWDITQMTNPKSCLLLTTAIAMKLGLV----------------PFHFWFPEVLQGSSMITALLLSTIMKlppIAIL 142
Cdd:PRK07376 198 WATGSFDFDGIADRLSELVSSGAVSGWLALLlcilvflgpmaksaqfPLHVWLPDAMEGPTPISALIHAATMV---AAGV 274
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 307829197 143 VLVS-----HSINPTLLTIMAI--ASTA-LGGWMGLNQTQTRKILAFSSISHLGWM 190
Cdd:PRK07376 275 FLVArmypvFEQFPAVMTVIAWtgAITAfLGASIALTQNDIKKGLAYSTISQLGYM 330
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
38-266 |
2.15e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 42.76 E-value: 2.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 38 LAIIPL---IAKSHHPRAIEATIKYFLVQAAASALVLFSSMTNAWATGQWDITQMTNPKSCLLLTTAI----------AM 104
Cdd:PRK06473 138 LELIPLyllIAIWGGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLSTQLlllapilvgfGI 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 105 KLGLVPFHFWFPEV-LQGSSMITALLLSTIMKLPPIAILVL-------VSHSINPTLLTIMAIaSTALGGWMGLNQTQTR 176
Cdd:PRK06473 218 KIPLVPFHTWLPDAhVEASTPVSVLLAGVLLKLGTYGLLRFgvglfpeAWVYLAPWLATWAVV-SVLYGASCAIAQKDMK 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 177 KILAFSSISHLGWMAIIIAYNPNLTMLNFYL----YAIMTATVFLTLNTT--KT-----LKLSTMMTSWTKTPMLNAALM 245
Cdd:PRK06473 297 KMVAYSSIGHMGYILLAAAAATPLSILAAVFqmisHGLISALLFLLVGVVykKTgsrdvDVLRGLLNPERGLPITGSLMI 376
|
250 260
....*....|....*....|.
gi 307829197 246 LTLLSLAGLPPLTGFMPKWLI 266
Cdd:PRK06473 377 LGVMASAGIPGMVGFIAEFLV 397
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-290 |
2.36e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 42.71 E-value: 2.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 55 ATIKYFLVQAAASALVLFSSMTNAWATGQ--WDITQMTN---PKSCLLLT-----TAIAMKLGLVPFHFWFPEVL-QGSS 123
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAksyPLALELLLyagflIAFGVKLPIFPLHTWLPDAHgEASA 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 124 MITALLLSTIMKLPPIAILVLV------SHSINPTLLTIMAIASTALGGWMGLNQTQTRKILAFSSISHLGWMAIIIAYN 197
Cdd:PRK12561 218 PVSMILAGVLLKMGGYALIRFNvqmlpdAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAF 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 198 PNL----TMLNFYLYAIMTATVFL----TLNTTKTLKLSTMMTSWTKTPMLNAA-LMLTLLSLAgLPPLTGFMPKWLIIY 268
Cdd:PRK12561 298 TDLgisgAMLQMISHGLIAAALFFltgvTYERTHTLSIPNMGGLAKVMPKTFALfTASSMASLA-LPGMSGFVSELTVFL 376
|
250 260
....*....|....*....|....
gi 307829197 269 DLTKQEMTATA--TLIAMLSLLGL 290
Cdd:PRK12561 377 GITSSDVYSSTfrTITILLAAVGL 400
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
88-266 |
2.44e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 42.89 E-value: 2.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 88 QMTNPKSCLLLTTAIAMKLGLVPFHFWFPEVLQGSSMITALLLSTI-MKLPPIAILVLVSHSINPTL-----LTIMAIAS 161
Cdd:PRK08042 176 LPLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMIT 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 162 TALGGWMGLNQTQTRKILAFSSISHLGWMAI--------IIAYNPNLTMLNFY--LYAIMTATVFLTL---------NTT 222
Cdd:PRK08042 256 AFVGGLYALMEHNIQRLLAYHTLENIGIILLglgagvtgIALEQPALIALGLVggLYHLLNHSLFKSVlflgagsvwFRT 335
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 307829197 223 KTLKLSTMMTSWTKTPMLNAALMLTLLSLAGLPPLTGFMPKWLI 266
Cdd:PRK08042 336 GHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVI 379
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
81-344 |
5.58e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 41.82 E-value: 5.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 81 TGQWDITQM--TNPKSCLLL---TTAIAMKLGLVPFHFWFPEVLQGSSMITALLLSTIMKLPPIAILVLVSHSI--NPTL 153
Cdd:MTH00066 191 TNSWELQQIflLNDNSTLPLlglILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLenNQTA 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 154 LTI---MAIASTALGGWMGLNQTQTRKILAFSSISHLGWMAIIIAYN-PNLTMLNFYLYAIMTATVFL-------TLNTT 222
Cdd:MTH00066 271 LTIclcLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNqPQLAFFHICTHAFFKAMLFLcsgsiihSLNDE 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 223 KTLKLstmMTSWTKT-PMLNAALMLTLLSLAGLPPLTGFMPKWLIIYDLTKQEMTATATLIAMLSLLGLFFY-LRLAYYS 300
Cdd:MTH00066 351 QDIRK---MGGLQKAlPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYsFRIIYFS 427
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 307829197 301 TITLPpnstNHMKQWHINKTTNTLIAILTSLS-----------MLLLPITPMILT 344
Cdd:MTH00066 428 SMKFP----RSLPLSPINENNPLIINPIKRLAwgsiiaglliiFNILPMKPQILT 478
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
68-300 |
8.99e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 41.09 E-value: 8.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 68 ALVLFSSMTNAWATGQWDITQMTNPKSCLLLTTAIAMKLGLVPFHFWFPEVLQGSSMITALLLSTIMKLPPIAILVLVSH 147
Cdd:MTH00211 180 SMVWLLLNLNSWEISQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSP 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 148 SINPTLLTIMAI----ASTAL-GGWMGLNQTQTRKILAFSSISHLGWMAIIIAYN-PNLTMLNFYLYAIMTATVFLTL-- 219
Cdd:MTH00211 260 LFQNNQLILGAVlllgALTMLfGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNqPQLAFLHICTHAFFKAMLFMCSgs 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 220 ---NTTKTLKLSTMMTSWTKTPMLNAALMLTLLSLAGLPPLTGFMPKWLIIYDLTKQEMTATATLIAML-SLLGLFFYLR 295
Cdd:MTH00211 340 iihGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLaTSLTAAYSFR 419
|
....*
gi 307829197 296 LAYYS 300
Cdd:MTH00211 420 LIFLS 424
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
7-190 |
1.39e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 40.45 E-value: 1.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 7 LTFIMSLLLGTTITISSNHW---MMAW--TGLEINTLaiipLIAKSHHPRAIEATIKYFLVQAAASALVLFSSMTNAWAT 81
Cdd:PRK08168 103 VRALAGVLAAVHLLVLSDHLlvlIAAWaaISLALHRL----LCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEV 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 82 GQWDI-----------TQMTNPKSCLLLTTAIAMKLGLVPFHFWFPEVLQGSSMITALLLSTI-----MKLPPIAILVLV 145
Cdd:PRK08168 179 GSLSLsalwahlaaqgASPSLQAAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVvnlggFVLIRFAPLLEQ 258
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 307829197 146 SHSINpTLLTIMAIASTALGGWMGLNQTQTRKILAFSSISHLGWM 190
Cdd:PRK08168 259 APPAR-WLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFM 302
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
8-267 |
1.84e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 40.16 E-value: 1.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 8 TFIMSLLLGTTITISSNHWMM--AWTGLEINTLAIIPLIAKSHHPRAIEATIKYFlvqaaASALVLFSSMTNAWATGQWD 85
Cdd:PRK06459 77 LYILTILGMAIVLTSDNYLLFlaGWEIMTIPSYVAIALTKKNKRPAFVFMAFGEL-----STVLILAGFAWAFIISGTTN 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 86 ITQMTNPKSCLLLTTAIAMKLGLVPFHF--WFPEVLQGSSMITALLLSTIMKLPPI-AILVLVSHSINPTL----LTIMA 158
Cdd:PRK06459 152 FSYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVyGILKMTILTQTIPIgyfgLTILA 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 159 IA--STALGGWMGLNQTQTRKILAFSSISHLGWM-----AIIIAYNPNLTMLNFYLYAIMT-------ATVFLTLNTTKT 224
Cdd:PRK06459 232 IGafSILFGALYAYVSENVKGLLAFSTIENNGAIlvalgLYMVTKQLITSIEHFSLITVILysfahsvAKTGLFLSSGLQ 311
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 307829197 225 LKLSTMMTSWTKTPMLNAALMLTLLSLAGLPPLTGFMPKWLII 267
Cdd:PRK06459 312 EKQSITYSKKIRNRWIELGLTLLASSLSGLLPNIGGVASWLLL 354
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
101-260 |
2.67e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 39.69 E-value: 2.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 101 AIAMKLGLVPFHFWFPEVLQGSSMITALLLSTIM-KLPPIAILVL------VSHSINPTLLTIMAIASTALGGWMGLNQT 173
Cdd:PRK02546 222 AYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILlKMGGYALLRMnagmlpDAHAQFAPLLIVLGVVNIIYAALTSFAQR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 174 QTRKILAFSSISHLGWMAIIIAYNPNL----TMLNFYLYAIMTATVFL----TLNTTKTLKLSTMMTSWTKTPMLNAalM 245
Cdd:PRK02546 302 NLKRKIAYSSISHMGFVLIGIGSFTDLgtsgAMLQMISHGLIGASLFFlvgaTYDRTHTLMLDEMGGVGQKMRKMFA--M 379
|
170
....*....|....*..
gi 307829197 246 LTLLSLA--GLPPLTGF 260
Cdd:PRK02546 380 WTACSLAslALPGMSGF 396
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
95-300 |
4.38e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 38.86 E-value: 4.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 95 CLLLTTAIAMKLGLVPFHFWFPEVLQGSSMITALLLSTIMKLPPIAILVLVSHSINPT-----LLTIMAIASTALGGWMG 169
Cdd:MTH00209 178 SVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSpffsmSLLLLGSLTTLMASMSA 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 170 LNQTQTRKILAFSSISHLGWMAIIIAYN-PNLTMLNFYLYAIMTATVFLTL-----NTTKTLKLSTMMTSWTKTPMLNAA 243
Cdd:MTH00209 258 NVESDLKKIIALSTLSQLGLMMCSLGLNqPELAFFHLITHALFKALLFICAgniihSHGHSQDIRMVGNLWYQMPITSIC 337
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 307829197 244 LMLTLLSLAGLPPLTGFMPKWLIIYDLTKQEMTATATLIAMLSL-LGLFFYLRLAYYS 300
Cdd:MTH00209 338 LNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTsLTAAYSMRLSYFS 395
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
84-267 |
4.96e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 38.68 E-value: 4.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 84 WDITQ--MTNPKSCLL----LTTAIAMKLGLVPFHFWFPEVLQGSSMITALLLSTIMKLPPIAILV----LVSHsiNPTL 153
Cdd:MTH00108 196 WDLQQifMLNPNNSNLplmgLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIrfhpLMEN--NKTI 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 154 LTIM----AIAS--TALggwMGLNQTQTRKILAFSSISHLGWMAIIIAYN-PNLTMLNFYLYAIMTATVFL-------TL 219
Cdd:MTH00108 274 QTLTlclgAITTlfTAI---CALTQNDIKKIVAFSTSSQLGLMMVTIGINqPHLAFLHICTHAFFKAMLFMcsgsiihNL 350
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 307829197 220 NTTKTLKlstMMTSWTKT-PMLNAALMLTLLSLAGLPPLTGFMPKWLII 267
Cdd:MTH00108 351 NDEQDIR---KMGGLFKTlPFTSTALIIGSLALTGMPFLTGFYSKDLII 396
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
110-272 |
9.26e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 37.81 E-value: 9.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 110 PFHFWFPEVLQGSSMITALLLSTIMKLPPIAIL-----VLVSHSINPTLLTIMAIASTALGGWMGLNQTQTRKILAFSSI 184
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLfrftpLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 185 SHLGWMAIII------AYNPNLTMLNFY-------LYAIMTATVF---------LTLNTTKTLKLSTMMTSWTKTPMLNA 242
Cdd:PRK12646 308 SQLGMIMAMVgigggyAQHQQDAIASIYvfvlfaaLFHLMNHAIFkcalfmgvgIIDHEAGTRDIRILSGMRQLFPKMNL 387
|
170 180 190
....*....|....*....|....*....|
gi 307829197 243 ALMLTLLSLAGLPPLTGFMPKWLIIYDLTK 272
Cdd:PRK12646 388 VMTIAALSMAGVPFLNGFLSKEMFLDALTQ 417
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
9-284 |
9.39e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 37.87 E-value: 9.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 9 FIMSLLLGTTITISSNHWMMaWTGLEINTLAIIPLIAKSHHPRAIEATIKYF-LVQAAASALVLFSSMTNAWATGQWDIT 87
Cdd:PRK06589 122 FNLTILIGVLIALSSDLFTM-FVCYELLTISTAFLIGHTRNNISLSGGYKYLkILMISALLLFLPAVILIYTKTGNLDFV 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 88 QM----TNPKSCLLLTTAIAM-KLGLVPFHFWFPEVLQGSSMITALLLSTIM----KLPPIAILVLVSHSINPT------ 152
Cdd:PRK06589 201 SGglfsKNQSIILLLMFIYGIaKTAIFPVHSWLPAAMVAHYPVSALLHAVIVvktgLFCIYKILLYIFGLSYLQrifaef 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 307829197 153 -LLTIMAIASTALGGWMGLNQTQTRKILAFSSISHLGW--MAIIIAYNPNLTMLNFYL--YAIMTATVFLTLNTTKTLK- 226
Cdd:PRK06589 281 nWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLalLSAFILTPKALGAAILHLvsHSFAKICLFYSMGSIYSLKk 360
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 307829197 227 ---LSTMMTSWTKTPMLNAALMLTLLSLAGLPPLTGFMPKWLIIYDLTKQEMTATATLIAM 284
Cdd:PRK06589 361 edqVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVML 421
|
|
| |
