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Conserved domains on  [gi|336443602|gb|AEI55865|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Murina suilla]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009566)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177166  Cd Length: 318  Bit Score: 571.18  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602   1 MYLINLLAMIIPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLQPLTSSPMLFIIAPTLALT 80
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602  81 LALTMWTPLPMPYPLMNMNLSMLFILALSSLAVYTIMWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSLLLMNGSF 160
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602 161 TLLSMTTTQEYIWLLIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTII 240
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 336443602 241 LFLGAYHNSMVPELYTINFTIKTLLITAFFLWIRASYPRFRYDQLMHLLWKNFLPLTLVMCMWHVALPIMLAGIPPQT 318
Cdd:MTH00104 241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 571.18  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602   1 MYLINLLAMIIPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLQPLTSSPMLFIIAPTLALT 80
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602  81 LALTMWTPLPMPYPLMNMNLSMLFILALSSLAVYTIMWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSLLLMNGSF 160
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602 161 TLLSMTTTQEYIWLLIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTII 240
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 336443602 241 LFLGAYHNSMVPELYTINFTIKTLLITAFFLWIRASYPRFRYDQLMHLLWKNFLPLTLVMCMWHVALPIMLAGIPPQT 318
Cdd:MTH00104 241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
NADHdh pfam00146
NADH dehydrogenase;
6-305 1.49e-119

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 346.00  E-value: 1.49e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602    6 LLAMIIPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLQPLTSSPMLFIIAPTLALTLALTM 85
Cdd:pfam00146   2 ILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602   86 WTPLPM--PYPLMNMNLSMLFILALSSLAVYTIMWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSLLLMNGSFTLL 163
Cdd:pfam00146  82 FAVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602  164 SMTTTQEYIWLLIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTIILFL 243
Cdd:pfam00146 162 EIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFL 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 336443602  244 GAYHnSMVPELYTINFTIKTLLITAFFLWIRASYPRFRYDQLMHLLWKNFLPLTLVMCMWHV 305
Cdd:pfam00146 242 GGWL-GPFPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-303 7.69e-110

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 322.08  E-value: 7.69e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602   1 MYLINLLAMIIPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLQPLTSSPMLFIIAPTLALT 80
Cdd:COG1005   10 ITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFI 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602  81 LALTMWTPLPM--PYPLMNMNLSMLFILALSSLAVYTIMWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSLLLMNG 158
Cdd:COG1005   90 PALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAG 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602 159 SFTLLSMTTTQE-YIWLLIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNAL 237
Cdd:COG1005  170 SLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSAL 249

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 336443602 238 TIILFLGAYH-----NSMVPELYTINFTIKTLLITAFFLWIRASYPRFRYDQLMHLLWKNFLPLTLVMCMW 303
Cdd:COG1005  250 ATTLFLGGWLgpfpiLPLGGLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVL 320
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 571.18  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602   1 MYLINLLAMIIPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLQPLTSSPMLFIIAPTLALT 80
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602  81 LALTMWTPLPMPYPLMNMNLSMLFILALSSLAVYTIMWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSLLLMNGSF 160
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602 161 TLLSMTTTQEYIWLLIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTII 240
Cdd:MTH00104 161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 336443602 241 LFLGAYHNSMVPELYTINFTIKTLLITAFFLWIRASYPRFRYDQLMHLLWKNFLPLTLVMCMWHVALPIMLAGIPPQT 318
Cdd:MTH00104 241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 538.33  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602   1 MYLINLLAMIIPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLQPLTSSPMLFIIAPTLALT 80
Cdd:MTH00111   6 LNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALL 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602  81 LALTMWTPLPMPYPLMNMNLSMLFILALSSLAVYTIMWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSLLLMNGSF 160
Cdd:MTH00111  86 LALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGY 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602 161 TLLSMTTTQEYIWLLIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTII 240
Cdd:MTH00111 166 TLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTI 245

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 336443602 241 LFLGAYHNSMVPELYTINFTIKTLLITAFFLWIRASYPRFRYDQLMHLLWKNFLPLTLVMCMWHVALPIMLAGIPPQT 318
Cdd:MTH00111 246 LFLNPSTLNLPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPPQL 323
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 529.95  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602   1 MYLINLLAMIIPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLQPLTSSPMLFIIAPTLALT 80
Cdd:MTH00134   7 THIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALT 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602  81 LALTMWTPLPMPYPLMNMNLSMLFILALSSLAVYTIMWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSLLLMNGSF 160
Cdd:MTH00134  87 LALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGF 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602 161 TLLSMTTTQEYIWLLIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTII 240
Cdd:MTH00134 167 TLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAI 246

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 336443602 241 LFLGAYHNSMVPELYTINFTIKTLLITAFFLWIRASYPRFRYDQLMHLLWKNFLPLTLVMCMWHVALPIMLAGIPPQT 318
Cdd:MTH00134 247 LFLGASHIPTLPELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGLPPQL 324
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-317 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 523.41  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602   1 MYLINLLAMIIPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLQPLTSSPMLFIIAPTLALT 80
Cdd:MTH00071   6 SLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALT 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602  81 LALTMWTPLPMPYPLMNMNLSMLFILALSSLAVYTIMWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSLLLMNGSF 160
Cdd:MTH00071  86 LALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGF 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602 161 TLLSMTTTQEYIWLLIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTII 240
Cdd:MTH00071 166 SLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTI 245

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 336443602 241 LFLGAYHNSMVPELYTINFTIKTLLITAFFLWIRASYPRFRYDQLMHLLWKNFLPLTLVMCMWHVALPIMLAGIPPQ 317
Cdd:MTH00071 246 LFLGSTYNHLQPELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIPPM 322
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 2-316 6.57e-154

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 433.18  E-value: 6.57e-154
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602   2 YLINLLAMIIPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLQPLTSSPMLFIIAPTLALTL 81
Cdd:MTH00218   4 SLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTL 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602  82 ALTMWTPLPMPYPLMNMNLSMLFILALSSLAVYTIMWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSLLLMNGSFT 161
Cdd:MTH00218  84 ALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFS 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602 162 LLSMTTTQEYIWLLIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTIIL 241
Cdd:MTH00218 164 LEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVIL 243

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 336443602 242 FLGAYHNsmvpelyTINFTIKTLLITAFFLWIRASYPRFRYDQLMHLLWKNFLPLTLVMCMWHVALPIMLAGIPP 316
Cdd:MTH00218 244 FLGTSLT-------TINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 1-316 8.35e-152

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 428.63  E-value: 8.35e-152
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602   1 MYLINLLAMIIPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLQPLTSSPMLFIIAPTLALT 80
Cdd:MTH00040   5 LFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLF 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602  81 LALTMWTPLPMPYPLMNMNLSMLFILALSSLAVYTIMWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSLLLMNGSF 160
Cdd:MTH00040  85 LALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSF 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602 161 TLLSMTTTQEYIWLLIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTII 240
Cdd:MTH00040 165 SLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVI 244

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 336443602 241 LFLGAyhNSMVPELYTIN---FTIKTLLITAFFLWIRASYPRFRYDQLMHLLWKNFLPLTLVMCMWHVALPIMLAGIPP 316
Cdd:MTH00040 245 LFLGG--GSPFNEIFPINiiiVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILPP 321
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 1-313 6.36e-123

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 354.82  E-value: 6.36e-123
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602   1 MYLINLLAMIIPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLQPLTSSPMLFIIAPTLALT 80
Cdd:MTH00195   3 ISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALA 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602  81 LALTMWTPLPMPYPLMNMNLSMLFILALSSLAVYTIMWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSLLLMNGSF 160
Cdd:MTH00195  83 LALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSF 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602 161 TLLSMTTTQEYIWLLIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTII 240
Cdd:MTH00195 163 DFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTI 242

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 336443602 241 LFLGAYHnsmvpelyTINFTIKTLLITAFFLWIRASYPRFRYDQLMHLLWKNFLPLTLVMCMWHVALPIMLAG 313
Cdd:MTH00195 243 LFLGGGG--------TIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFALNS 307
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-311 1.11e-121

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 351.38  E-value: 1.11e-121
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602   1 MYLINLLAMIIPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLQPLTSSPMLFIIAPTLALT 80
Cdd:MTH00193   3 MMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLF 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602  81 LALTMWTPLPMPYPLMNMNLSMLFILALSSLAVYTIMWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSLLLMNGSF 160
Cdd:MTH00193  83 LSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSF 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602 161 TLLSMTTTQEYIWLLIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTII 240
Cdd:MTH00193 163 NLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVL 242

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 336443602 241 LFLGAYhnsmvpeLYTINFTIKTLLITAFFLWIRASYPRFRYDQLMHLLWKNFLPLTLVMCMWHVALPIML 311
Cdd:MTH00193 243 MFLGGD-------LLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 1-302 8.41e-121

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 349.17  E-value: 8.41e-121
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602   1 MYLINLLAMIIPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLQPLTSSPMLFIIAPTLALT 80
Cdd:MTH00143   2 VSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602  81 LALTMWTPLPMPYPLMNMNLSMLFILALSSLAVYTIMWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSLLLMNGSF 160
Cdd:MTH00143  82 LALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSF 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602 161 TLLSMTTTQEYIWLLIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTII 240
Cdd:MTH00143 162 SFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVV 241

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 336443602 241 LFLGayHNSMVPELYTINFTIKTLLITAFFLWIRASYPRFRYDQLMHLLWKNFLPLTLVMCM 302
Cdd:MTH00143 242 LFFG--GSSVLFLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILV 301
NADHdh pfam00146
NADH dehydrogenase;
6-305 1.49e-119

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 346.00  E-value: 1.49e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602    6 LLAMIIPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLQPLTSSPMLFIIAPTLALTLALTM 85
Cdd:pfam00146   2 ILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602   86 WTPLPM--PYPLMNMNLSMLFILALSSLAVYTIMWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSLLLMNGSFTLL 163
Cdd:pfam00146  82 FAVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602  164 SMTTTQEYIWLLIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTIILFL 243
Cdd:pfam00146 162 EIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFL 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 336443602  244 GAYHnSMVPELYTINFTIKTLLITAFFLWIRASYPRFRYDQLMHLLWKNFLPLTLVMCMWHV 305
Cdd:pfam00146 242 GGWL-GPFPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 1-298 1.39e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 323.14  E-value: 1.39e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602   1 MYLINLLAMIIPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLQPLTSSPMLFIIAPTLALT 80
Cdd:MTH00225   2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602  81 LALTMWTPLPMPYPLMNMNLSMLFILALSSLAVYTIMWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSLLLMNGSF 160
Cdd:MTH00225  82 LSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTY 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602 161 TLLSMTTTQEYIWLLIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTII 240
Cdd:MTH00225 162 NLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSI 241

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 336443602 241 LFLGAYHNSMvpelyTINFTIKTLLITAFFLWIRASYPRFRYDQLMHLLWKNFLPLTL 298
Cdd:MTH00225 242 LFFGGFFVTI-----DLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSL 294
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 1-316 5.63e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 322.45  E-value: 5.63e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602   1 MYLINLLAMIIPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLQPLTSSPMLFIIAPTLALT 80
Cdd:MTH00054   3 IIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLT 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602  81 LALTMWTPLPM--PYPLMNMNLSMLFILALSSLAVYTIMWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSLLLMNG 158
Cdd:MTH00054  83 LAFIAWGVIPYgeGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVG 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602 159 SFTLLSMTTTQEYIWLLIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALT 238
Cdd:MTH00054 163 SLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFG 242

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602 239 IILFLGAYHNSMVPELYTIN---FTIKTLLITAFFLWIRASYPRFRYDQLMHLLWKNFLPLTLVMCMWHVALPIMLAGIP 315
Cdd:MTH00054 243 VILFLGGWLVISGPTSYFSNfvwFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALP 322


                 .
gi 336443602 316 P 316
Cdd:MTH00054 323 P 323
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-303 7.69e-110

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 322.08  E-value: 7.69e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602   1 MYLINLLAMIIPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLQPLTSSPMLFIIAPTLALT 80
Cdd:COG1005   10 ITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFI 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602  81 LALTMWTPLPM--PYPLMNMNLSMLFILALSSLAVYTIMWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSLLLMNG 158
Cdd:COG1005   90 PALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAG 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602 159 SFTLLSMTTTQE-YIWLLIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNAL 237
Cdd:COG1005  170 SLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSAL 249

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 336443602 238 TIILFLGAYH-----NSMVPELYTINFTIKTLLITAFFLWIRASYPRFRYDQLMHLLWKNFLPLTLVMCMW 303
Cdd:COG1005  250 ATTLFLGGWLgpfpiLPLGGLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVL 320
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 2-316 8.44e-108

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 317.06  E-value: 8.44e-108
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602   2 YLINLLAMIIPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLQPLTSSPMLFIIAPTLALTL 81
Cdd:MTH00216   8 YLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTL 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602  82 ALTMWTPLPMPYPLM--NMNLSMLFILALSSLAVYTIMWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSLLLMNGS 159
Cdd:MTH00216  88 ALIVWGVIPYERGVLisDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGS 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602 160 FTLLSMTTTQ-EYIWLLIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALT 238
Cdd:MTH00216 168 LSITEIVLAQnNGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLT 247

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602 239 IILFLGAYhNSMVPELYTIN--FTIKTLLITAFFLWIRASYPRFRYDQLMHLLWKNFLPLTLVMCMWHVALPIMLAGIPP 316
Cdd:MTH00216 248 TILFLGGW-LSPIKYFKGGAgwFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGFNGPPP 326
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
1-307 2.62e-104

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 307.89  E-value: 2.62e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602   1 MYLINLLAMIIPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLQPLTSSPMLFIIAPTLALT 80
Cdd:PRK06076  11 LILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFI 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602  81 LALTMWTPLPM--PYPLMNMNLSMLFILALSSLAVYTIMWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSLLLMNG 158
Cdd:PRK06076  91 PAFLAWAVIPFgpELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAG 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602 159 SFTLLSMTTTQEYIWLLIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALT 238
Cdd:PRK06076 171 SLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALI 250

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 336443602 239 IILFLGAYH---NSMVPELYTINFTIKTLLITAFFLWIRASYPRFRYDQLMHLLWKNFLPLTLVMCMWHVAL 307
Cdd:PRK06076 251 TTLFLGGWLppfPLGGGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLLTAAV 322
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 4-316 6.22e-90

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 272.28  E-value: 6.22e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602   4 INLLAMIIPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLQPLTSSPMLFIIAPTLALTLAL 83
Cdd:MTH00029  11 IKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAI 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602  84 TMWTPLPMPYP--LMNMNLSMLFILALSSLAVYTIMWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSLLLMNGSFT 161
Cdd:MTH00029  91 LAWAIVTMDQGvfLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLN 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602 162 LLSMTTTQEYIWLLIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTIIL 241
Cdd:MTH00029 171 ISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIF 250

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602 242 FLGAYHNSM-----VPELYTIN-----------FTIKTLLITAFFLWIRASYPRFRYDQLMHLLWKNFLPLTLVMCMWHV 305
Cdd:MTH00029 251 FLGGWLSPLdgiptPPEAFSIFeqiasskssfwFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTA 330

                        330
                 ....*....|.
gi 336443602 306 ALPIMLAGIPP 316
Cdd:MTH00029 331 GILIGFNGVPP 341
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 2-311 8.83e-89

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 267.80  E-value: 8.83e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602   2 YLINLLAMIIPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLQPLTSSPMLFIIAPTLALTL 81
Cdd:MTH00010   5 FFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLIL 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602  82 ALTMWTPLPMPYPLMNMNLSMLFILALSSLAVYTIMWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSLLLMNGSFT 161
Cdd:MTH00010  85 ALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFS 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602 162 LLSMTTTQeYIWLLIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTIIL 241
Cdd:MTH00010 165 FSKIIMSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVF 243

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602 242 FLGAYHNSMVPELYTInftIKTLLITAFFLWIRASYPRFRYDQLMHLLWKNFLPLTLVMCMwhVALPIML 311
Cdd:MTH00010 244 FTSFIPSIFISDLMLI---LKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLM--ISIPIMF 308
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 5-307 1.30e-67

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 212.84  E-value: 1.30e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602   5 NLLAMIIPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLQPLTSSPMLFIIAPTLALTLALT 84
Cdd:MTH00090   1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602  85 MWTPLPMPYPLMNMNLSMLFILALSSLAVYTIMWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSLLLMNGSFTLLS 164
Cdd:MTH00090  81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602 165 mtttQEYIWLLIpswpLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTIILFLG 244
Cdd:MTH00090 161 ----SFSLSLFV----IYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK 232

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 336443602 245 ayhnsmvpelytINFTIKTLLITaFFLWIRASYPRFRYDQLMHLLWKNFLPLTLVMCMWHVAL 307
Cdd:MTH00090 233 ------------FSFLMLFLIFS-LLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVL 282
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 1-300 1.31e-52

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 174.73  E-value: 1.31e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602   1 MYLINLLAMIIpVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLQPLTSSPMLFIIAPTLALT 80
Cdd:MTH00058   3 GLVSGLEGLLI-ILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602  81 LALTMWTPLPMPYPLMNMNLSMLFILALSSLAVYTIMWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSLLLMNGSF 160
Cdd:MTH00058  82 LVVFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSY 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602 161 TLLSMTTTQEYIWLLIPswPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMNALTII 240
Cdd:MTH00058 162 SLVDFYYSGWLSVLLFP--LIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSV 239

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602 241 LFLGAYHNSMVpelytinftikTLLITAFFLWIRASYPRFRYDQLMHLLWKNFLPLTLVM 300
Cdd:MTH00058 240 LFFGGGFVSIM-----------LLFHLLFFMWARATLPRVRYDYFVNFFWEYCLVLLILS 288
ndhA CHL00032
NADH dehydrogenase subunit 1
 3-298 1.28e-48

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 166.28  E-value: 1.28e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602   3 LINLLAMIIPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLQPLTSSPMLFIIAPTLALTLA 82
Cdd:CHL00032  30 LVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISI 109

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602  83 LTMWTPLPMPYP--LMNMNLSMLFILALSSLAVYTIMWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSLLLMNGSF 160
Cdd:CHL00032 110 LLSYLVIPFGYHlvLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSL 189

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602 161 TLLSMTTTQ-EY-IWllipSWPL------AMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANII 232
Cdd:CHL00032 190 STVDIVEAQsKYgFW----GWNLwrqpigFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLL 265

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602 233 MMNALTIILFLGAYHNSM----VPELYTINFTIK----------TLLITAFFLWI----RASYPRFRYDQLMHLLWKNFL 294
Cdd:CHL00032 266 VSSLFVTVLYLGGWNLSIpyifIPELFEINKTGGvfgttigifiTLAKTYLFLFIsittRWTLPRLRMDQLLNLGWKFLL 345


                 ....
gi 336443602 295 PLTL 298
Cdd:CHL00032 346 PISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
1-294 1.70e-32

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 122.21  E-value: 1.70e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602   1 MYLINLLAMIIPVLLAVAFLTLLERKVLGYMQLRKGPnivgpyGLLQPIADAVKLFTKEPLQPLTSSPmLFIIAPTLAL- 79
Cdd:COG0650    2 MLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASW-LFRAAPYVALa 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602  80 -TLALTMWTPLPMPYPLMNMNLSMLFILALSSLAVYTIMWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSLLLMNG 158
Cdd:COG0650   75 aMLLAALLVPVLTTGPPLSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAG 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 336443602 159 SFTLLSMTTTQE---YIWLLIPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIIMMN 235
Cdd:COG0650  155 STSLSDIVAYQAahgPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLL 234

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 336443602 236 ALTIILFLGaYHNSMVPELYTINFTIKTLLITAFFLWIRASYPRFRYDQLMHLLWKNFL 294
Cdd:COG0650  235 SLFVNLFLP-WGIALTLLLALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFL 292
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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