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Conserved domains on  [gi|355001018|gb|AER51268|]
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cytochrome b, partial (mitochondrion) [Notiospathius sp. 9 AZR-2011]

Protein Classification

cytochrome b( domain architecture ID 999997)

cytochrome b is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain; contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis

CATH:  1.20.810.10
Gene Symbol:  CYTB
Gene Ontology:  GO:0009055|GO:0046872|GO:0022904|GO:0005743|GO:0020037
PubMed:  2509716|8329437
SCOP:  4002208

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
CYTB super family cl33360
cytochrome b; Provisional
 1-114 1.70e-62

cytochrome b; Provisional


The actual alignment was detected with superfamily member MTH00156:

Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 193.85  E-value: 1.70e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355001018   1 IVEWLWGGFSVDNATLNRFYTLHFLLPFILSVMVLLHLVFLHETGSNNPLGLNSNFYKIMFHNYFSLKDMLGFIWFFFFF 80
Cdd:MTH00156 150 LVQWIWGGFSVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLL 229

                         90       100       110
                 ....*....|....*....|....*....|....
gi 355001018  81 LIIIFEYPYILGDPENFIKADSMVTPVHIQPEWY 114
Cdd:MTH00156 230 ILLTLINPYLLGDPENFIPANPLVTPVHIQPEWY 263
 
Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 1-114 1.70e-62

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 193.85  E-value: 1.70e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355001018   1 IVEWLWGGFSVDNATLNRFYTLHFLLPFILSVMVLLHLVFLHETGSNNPLGLNSNFYKIMFHNYFSLKDMLGFIWFFFFF 80
Cdd:MTH00156 150 LVQWIWGGFSVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLL 229

                         90       100       110
                 ....*....|....*....|....*....|....
gi 355001018  81 LIIIFEYPYILGDPENFIKADSMVTPVHIQPEWY 114
Cdd:MTH00156 230 ILLTLINPYLLGDPENFIPANPLVTPVHIQPEWY 263
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
1-114 2.94e-24

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 94.86  E-value: 2.94e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355001018   1 IVEWLWGGFSVDNATLNRFYTLH-FLLPFILSVMVLLHLVFLHETGSNNPLGLNSNFYK----IMFHNYFSLKDMLGFIW 75
Cdd:COG1290  171 LVTWLFGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFV 250

                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 355001018  76 FFFFFLIIIFEYPyiLGDPENFIKADSMVTPVHIQPEWY 114
Cdd:COG1290  251 FLGVFALLAFFFP--INPPPNYGPANPLATPAHIQPDWY 287
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 1-47 4.74e-19

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 77.79  E-value: 4.74e-19
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 355001018   1 IVEWLWGGFSVDNATLNRFYTLHFLLPFILSVMVLLHLVFLHETGSN 47
Cdd:cd00284  154 LVEWLWGGFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
1-45 2.94e-16

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 70.49  E-value: 2.94e-16
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 355001018    1 IVEWLWGGFSVDNATLNRFYTLHFLLPFILSVMVLLHLVFLHETG 45
Cdd:pfam00033 145 LVEWIWGSFSVDQATLTRFFSLHFLLPFILAILMLLHLLFLHETG 189
 
Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 1-114 1.70e-62

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 193.85  E-value: 1.70e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355001018   1 IVEWLWGGFSVDNATLNRFYTLHFLLPFILSVMVLLHLVFLHETGSNNPLGLNSNFYKIMFHNYFSLKDMLGFIWFFFFF 80
Cdd:MTH00156 150 LVQWIWGGFSVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLL 229

                         90       100       110
                 ....*....|....*....|....*....|....
gi 355001018  81 LIIIFEYPYILGDPENFIKADSMVTPVHIQPEWY 114
Cdd:MTH00156 230 ILLTLINPYLLGDPENFIPANPLVTPVHIQPEWY 263
CYTB MTH00191
cytochrome b; Provisional
 1-114 3.53e-56

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 177.80  E-value: 3.53e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355001018   1 IVEWLWGGFSVDNATLNRFYTLHFLLPFILSVMVLLHLVFLHETGSNNPLGLNSNFYKIMFHNYFSLKDMLGFIWFFFFF 80
Cdd:MTH00191 157 LVQWLWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLL 236

                         90       100       110
                 ....*....|....*....|....*....|....
gi 355001018  81 LIIIFEYPYILGDPENFIKADSMVTPVHIQPEWY 114
Cdd:MTH00191 237 LFLVLFSPNLLGDPENFIPANPLVTPVHIKPEWY 270
CYTB MTH00145
cytochrome b; Provisional
 1-114 1.94e-54

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 173.94  E-value: 1.94e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355001018   1 IVEWLWGGFSVDNATLNRFYTLHFLLPFILSVMVLLHLVFLHETGSNNPLGLNSNFYKIMFHNYFSLKDMLGFIWFFFFF 80
Cdd:MTH00145 161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240

                         90       100       110
                 ....*....|....*....|....*....|....
gi 355001018  81 LIIIFEYPYILGDPENFIKADSMVTPVHIQPEWY 114
Cdd:MTH00145 241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWY 274
CYTB MTH00119
cytochrome b; Provisional
 1-114 4.96e-54

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 172.78  E-value: 4.96e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355001018   1 IVEWLWGGFSVDNATLNRFYTLHFLLPFILSVMVLLHLVFLHETGSNNPLGLNSNFYKIMFHNYFSLKDMLGFIWFFFFF 80
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240

                         90       100       110
                 ....*....|....*....|....*....|....
gi 355001018  81 LIIIFEYPYILGDPENFIKADSMVTPVHIQPEWY 114
Cdd:MTH00119 241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWY 274
CYTB MTH00016
cytochrome b; Validated
 1-114 1.21e-51

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 166.39  E-value: 1.21e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355001018   1 IVEWLWGGFSVDNATLNRFYTLHFLLPFILSVMVLLHLVFLHETGSNNPLGLNSNFYKIMFHNYFSLKDMLGFIWFFFFF 80
Cdd:MTH00016 161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240

                         90       100       110
                 ....*....|....*....|....*....|....
gi 355001018  81 LIIIFEYPYILGDPENFIKADSMVTPVHIQPEWY 114
Cdd:MTH00016 241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWY 274
CYTB MTH00131
cytochrome b; Provisional
 1-114 5.98e-50

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 162.13  E-value: 5.98e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355001018   1 IVEWLWGGFSVDNATLNRFYTLHFLLPFILSVMVLLHLVFLHETGSNNPLGLNSNFYKIMFHNYFSLKDMLGFIWFFFFF 80
Cdd:MTH00131 160 LVQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLAL 239

                         90       100       110
                 ....*....|....*....|....*....|....
gi 355001018  81 LIIIFEYPYILGDPENFIKADSMVTPVHIQPEWY 114
Cdd:MTH00131 240 TSLALFSPNLLGDPDNFTPANPLVTPPHIKPEWY 273
CYTB MTH00034
cytochrome b; Validated
 1-114 1.91e-48

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 158.33  E-value: 1.91e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355001018   1 IVEWLWGGFSVDNATLNRFYTLHFLLPFILSVMVLLHLVFLHETGSNNPLGLNSNFYKIMFHNYFSLKDMLGFIWFFFFF 80
Cdd:MTH00034 160 IVQWIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAAL 239

                         90       100       110
                 ....*....|....*....|....*....|....
gi 355001018  81 LIIIFEYPYILGDPENFIKADSMVTPVHIQPEWY 114
Cdd:MTH00034 240 SSLALLFPTALNDPENFIPANPLVTPPHIQPEWY 273
CYTB MTH00074
cytochrome b; Provisional
 1-114 6.88e-48

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 156.76  E-value: 6.88e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355001018   1 IVEWLWGGFSVDNATLNRFYTLHFLLPFILSVMVLLHLVFLHETGSNNPLGLNSNFYKIMFHNYFSLKDMLGFIWFFFFF 80
Cdd:MTH00074 161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTAL 240

                         90       100       110
                 ....*....|....*....|....*....|....
gi 355001018  81 LIIIFEYPYILGDPENFIKADSMVTPVHIQPEWY 114
Cdd:MTH00074 241 ALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWY 274
CYTB MTH00100
cytochrome b; Provisional
 1-114 6.56e-47

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 154.41  E-value: 6.56e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355001018   1 IVEWLWGGFSVDNATLNRFYTLHFLLPFILSVMVLLHLVFLHETGSNNPLGLNSNFYKIMFHNYFSLKDMLGFIWFFFFF 80
Cdd:MTH00100 160 LVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTL 239

                         90       100       110
                 ....*....|....*....|....*....|....
gi 355001018  81 LIIIFEYPYILGDPENFIKADSMVTPVHIQPEWY 114
Cdd:MTH00100 240 MLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWY 273
CYTB MTH00022
cytochrome b; Validated
 1-114 1.34e-44

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 148.31  E-value: 1.34e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355001018   1 IVEWLWGGFSVDNATLNRFYTLHFLLPFILSVMVLLHLVFLHETGSNNPLGLNSNFYKIMFHNYFSLKDMLGFIWFFFFF 80
Cdd:MTH00022 159 IVQWVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLL 238

                         90       100       110
                 ....*....|....*....|....*....|....
gi 355001018  81 LIIIFEYPYILGDPENFIKADSMVTPVHIQPEWY 114
Cdd:MTH00022 239 SFIVYFAPNLLGDPENFIQANSLVTPVHIQPEWY 272
CYTB MTH00053
cytochrome b; Provisional
 1-114 4.78e-44

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 146.77  E-value: 4.78e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355001018   1 IVEWLWGGFSVDNATLNRFYTLHFLLPFILSVMVLLHLVFLHETGSNNPLGLNSNFYKIMFHNYFSLKDMLGFIWFFFFF 80
Cdd:MTH00053 161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240

                         90       100       110
                 ....*....|....*....|....*....|....
gi 355001018  81 LIIIFEYPYILGDPENFIKADSMVTPVHIQPEWY 114
Cdd:MTH00053 241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWY 274
CYTB MTH00224
cytochrome b; Provisional
 1-114 5.67e-41

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 138.90  E-value: 5.67e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355001018   1 IVEWLWGGFSVDNATLNRFYTLHFLLPFILSVMVLLHLVFLHETGSNNPLGLNSNFYKIMFHNYFSLKDMLGFIWFFFFF 80
Cdd:MTH00224 161 LVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLL 240

                         90       100       110
                 ....*....|....*....|....*....|....
gi 355001018  81 LIIIFEYPYILGDPENFIKADSMVTPVHIQPEWY 114
Cdd:MTH00224 241 SLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWY 274
CYTB MTH00086
cytochrome b; Provisional
 1-114 4.10e-35

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 123.13  E-value: 4.10e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355001018   1 IVEWLWGGFSVDNATLNRFYTLHFLLPFILSVMVLLHLVFLHETGSNNPLGLNSNFYKIMFHNYFSLKDMLGFIWFFFFF 80
Cdd:MTH00086 149 IVMWIWGGFGVSSATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIFWLVFI 228

                         90       100       110
                 ....*....|....*....|....*....|....
gi 355001018  81 LIIIFeYPYILGDPENFIKADSMVTPVHIQPEWY 114
Cdd:MTH00086 229 IFSLF-YPFNLGDPEMFIEADPMMSPVHIVPEWY 261
CYTB MTH00033
cytochrome b; Provisional
 1-114 4.06e-33

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 118.50  E-value: 4.06e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355001018   1 IVEWLWGGFSVDNATLNRFYTLHFLLPFILSVMVLLHLVFLHETGSNNPLGLNSNFYKIMFHNYFSLKDMLGFIWFFFFF 80
Cdd:MTH00033 157 IVEWIWGGFSVSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVF 236

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 355001018  81 LIIIFE--YPYILGDPENFIKADSMVTPVHIQPEWY 114
Cdd:MTH00033 237 VIIGIEprIETLLQDPENFIQANPLVTPVHIQPEWY 272
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
1-114 2.94e-24

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 94.86  E-value: 2.94e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355001018   1 IVEWLWGGFSVDNATLNRFYTLH-FLLPFILSVMVLLHLVFLHETGSNNPLGLNSNFYK----IMFHNYFSLKDMLGFIW 75
Cdd:COG1290  171 LVTWLFGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFV 250

                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 355001018  76 FFFFFLIIIFEYPyiLGDPENFIKADSMVTPVHIQPEWY 114
Cdd:COG1290  251 FLGVFALLAFFFP--INPPPNYGPANPLATPAHIQPDWY 287
CYTB MTH00046
cytochrome b; Validated
 7-114 1.72e-22

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 89.66  E-value: 1.72e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 355001018   7 GGFSVDNATLNRFYTLHFLLPFILSVMVLLHLVFLHETGSNNPLGLNSNFYK-IMFHNYFSLKDMLGFIWFFFFFLIIIF 85
Cdd:MTH00046 157 GGFSVTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGYSDvVYFHSYFTVKDLFLFMVVCSLLVFWLF 236

                         90       100
                 ....*....|....*....|....*....
gi 355001018  86 EYPYILGDPENFIKADSMVTPVHIQPEWY 114
Cdd:MTH00046 237 VSPDLVLDIEAYLEADPLVTPVSIKPEWY 265
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 1-47 4.74e-19

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 77.79  E-value: 4.74e-19
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 355001018   1 IVEWLWGGFSVDNATLNRFYTLHFLLPFILSVMVLLHLVFLHETGSN 47
Cdd:cd00284  154 LVEWLWGGFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
1-45 2.94e-16

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 70.49  E-value: 2.94e-16
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 355001018    1 IVEWLWGGFSVDNATLNRFYTLHFLLPFILSVMVLLHLVFLHETG 45
Cdd:pfam00033 145 LVEWIWGSFSVDQATLTRFFSLHFLLPFILAILMLLHLLFLHETG 189
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
1-72 8.85e-14

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 63.41  E-value: 8.85e-14
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 355001018    1 IVEWLWGGFSVDNATLNRFYTLHF-LLPFILSVMVLLHLVFLHETGSNNPLGLNSNFYKIMFHNYFSLKDMLG 72
Cdd:pfam13631  75 LVWLLFGGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLF 147
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
100-114 1.10e-03

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 35.53  E-value: 1.10e-03
                          10
                  ....*....|....*
gi 355001018  100 ADSMVTPVHIQPEWY 114
Cdd:pfam00032   2 ANPLVTPAHIVPEWY 16
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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