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Conserved domains on  [gi|359292218|gb|AEV21364|]
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adenosine triphosphate synthase subunit 6, partial (mitochondrion) [Lysiphlebus aff. fabarum 'morphotype L. fabarum']

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 3-209 7.78e-64

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 197.31  E-value: 7.78e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218   3 FSLNWISTLIGLFFIPQLCWLMMSRILFLLINFLMILWMEFKIILKNNFNMNNLLFyISLFMFILMNNFLGLFPYIFTSS 82
Cdd:MTH00157  17 LSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIF-ISLFSFILFNNFLGLFPYIFTST 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218  83 SHLIYSLSLSLPMWLGLMIFGWVKNTNFMFAHLVPQGTPFVLMFFMVLIESLSNIIRPFTLSIRLTANMIAGHLLLTLLS 162
Cdd:MTH00157  96 SHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLAANMIAGHLLLTLLG 175

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 359292218 163 SFIPNF-LLFYLIVLFLQLVLLILEVSVSMIQSYVFVILMILYLKETN 209
Cdd:MTH00157 176 NTGPSLsSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 3-209 7.78e-64

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 197.31  E-value: 7.78e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218   3 FSLNWISTLIGLFFIPQLCWLMMSRILFLLINFLMILWMEFKIILKNNFNMNNLLFyISLFMFILMNNFLGLFPYIFTSS 82
Cdd:MTH00157  17 LSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIF-ISLFSFILFNNFLGLFPYIFTST 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218  83 SHLIYSLSLSLPMWLGLMIFGWVKNTNFMFAHLVPQGTPFVLMFFMVLIESLSNIIRPFTLSIRLTANMIAGHLLLTLLS 162
Cdd:MTH00157  96 SHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLAANMIAGHLLLTLLG 175

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 359292218 163 SFIPNF-LLFYLIVLFLQLVLLILEVSVSMIQSYVFVILMILYLKETN 209
Cdd:MTH00157 176 NTGPSLsSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 60-206 1.15e-32

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 115.19  E-value: 1.15e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218  60 ISLFMFILMNNFLGLFPYIFTSSSHLIYSLSLSLPMWLGLMIFGWVKNTNFMFAHLVPQGTPFVLMFFMVLIESLSNIIR 139
Cdd:cd00310    9 GTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISELIR 88

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 359292218 140 PFTLSIRLTANMIAGHLLLTLLSSFIPNFLLFYLIVLFLQLVLLIL-EVSVSMIQSYVFVILMILYLK 206
Cdd:cd00310   89 PLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLlELFVAFIQAYVFTLLTAVYIS 156
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 60-207 3.31e-30

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 111.14  E-value: 3.31e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218   60 ISLFMFILMNNFLGLFPYIFTSSSHLIYSLSLSLPMWLGLMIFGWVKNTNFMFAHLVPQGTPFVLMFFMVLIESLSNIIR 139
Cdd:TIGR01131  75 FTLFLFILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLAR 154

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218  140 PFTLSIRLTANMIAGHLLLTLLSSFIPNF--LLFYLIVLFLQLVLLILEVSVSMIQSYVFVILMILYLKE 207
Cdd:TIGR01131 155 PISLSVRLFANISAGHLLLTLLSGLLFSLmsSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLND 224
ATP-synt_A pfam00119
ATP synthase A chain;
61-206 1.01e-20

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 86.00  E-value: 1.01e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218   61 SLFMFILMNNFLGLF---PYIFTSSSHLIYSLSLSLPMWLGLMIFGWVKN-TNFMFAHLVPQGTPFVLMFFMVLIESLSN 136
Cdd:pfam00119  63 TLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISE 142

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 359292218  137 IIRPFTLSIRLTANMIAGHLLLTLLSSFIPNFLLFYLIVLFLQLVLLIL----EVSVSMIQSYVFVILMILYLK 206
Cdd:pfam00119 143 FARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVIPPLLGVAwtlfELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 61-205 4.95e-18

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 78.58  E-value: 4.95e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218  61 SLFMFILMNNFLGLFPYIFTSSSHLIYSLSLSLPMWLGLMIFGWVKNTNFMFAHLVPQGTPFVLMFFMVLIESLSNIIRP 140
Cdd:COG0356   63 TLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKGLGGYLKHLFFPPFPWLAPLMLPIEIISELARP 142

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 359292218 141 FTLSIRLTANMIAGHLLLTLLSSFIPnFLLFYLIVLFLQLVLLILEVSVSMIQSYVFVILMILYL 205
Cdd:COG0356  143 LSLSLRLFGNMFAGHIILLLLAGLAP-FLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYI 206
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 3-209 7.78e-64

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 197.31  E-value: 7.78e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218   3 FSLNWISTLIGLFFIPQLCWLMMSRILFLLINFLMILWMEFKIILKNNFNMNNLLFyISLFMFILMNNFLGLFPYIFTSS 82
Cdd:MTH00157  17 LSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIF-ISLFSFILFNNFLGLFPYIFTST 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218  83 SHLIYSLSLSLPMWLGLMIFGWVKNTNFMFAHLVPQGTPFVLMFFMVLIESLSNIIRPFTLSIRLTANMIAGHLLLTLLS 162
Cdd:MTH00157  96 SHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLAANMIAGHLLLTLLG 175

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 359292218 163 SFIPNF-LLFYLIVLFLQLVLLILEVSVSMIQSYVFVILMILYLKETN 209
Cdd:MTH00157 176 NTGPSLsSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 60-206 1.15e-32

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 115.19  E-value: 1.15e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218  60 ISLFMFILMNNFLGLFPYIFTSSSHLIYSLSLSLPMWLGLMIFGWVKNTNFMFAHLVPQGTPFVLMFFMVLIESLSNIIR 139
Cdd:cd00310    9 GTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISELIR 88

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 359292218 140 PFTLSIRLTANMIAGHLLLTLLSSFIPNFLLFYLIVLFLQLVLLIL-EVSVSMIQSYVFVILMILYLK 206
Cdd:cd00310   89 PLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLlELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 4-207 1.36e-31

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 114.74  E-value: 1.36e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218   4 SLNWISTLIGLFFIPQLCWLMMSRIlFLLINFLMILWMEFKIILKNNFNMNNLLFYISLFMFILMNNFLGLFPYIFTSSS 83
Cdd:MTH00176  21 SLSWITLLLFLLLMPSSVWFCPSKL-QVFMLMFSTFLPEMILRSNGSYILGSASIIISLFILVMSLNLSGLIPYVFTSTS 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218  84 HLIYSLSLSLPMWLGLMIFGWVKNTNFMFAHLVPQGTPFVLMFFMVLIESLSNIIRPFTLSIRLTANMIAGHLLLTLLS- 162
Cdd:MTH00176 100 HLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLAVRLAANLSAGHLLLGLLGa 179

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 359292218 163 ---SFIPNFLLFYLIVLFLQLVLLILEVSVSMIQSYVFVILMILYLKE 207
Cdd:MTH00176 180 amwGLLPVSPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDE 227
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 59-207 3.97e-31

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 113.38  E-value: 3.97e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218  59 YISLFMFILMNNFLGLFPYIFTSSSHLIYSLSLSLPMWLGLMIFGWVKNTNFMFAHLVPQGTPFVLMFFMVLIESLSNII 138
Cdd:MTH00120  73 LTSLMLLLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLI 152

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 359292218 139 RPFTLSIRLTANMIAGHLLLTLLSS----FIPNFLLFYLIVLFLQLVLLILEVSVSMIQSYVFVILMILYLKE 207
Cdd:MTH00120 153 RPLALGVRLTANLTAGHLLIQLISTatlnLLPTMPTLSLLTLIILLLLTILELAVAMIQAYVFVLLLSLYLQE 225
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 60-207 3.31e-30

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 111.14  E-value: 3.31e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218   60 ISLFMFILMNNFLGLFPYIFTSSSHLIYSLSLSLPMWLGLMIFGWVKNTNFMFAHLVPQGTPFVLMFFMVLIESLSNIIR 139
Cdd:TIGR01131  75 FTLFLFILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLAR 154

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218  140 PFTLSIRLTANMIAGHLLLTLLSSFIPNF--LLFYLIVLFLQLVLLILEVSVSMIQSYVFVILMILYLKE 207
Cdd:TIGR01131 155 PISLSVRLFANISAGHLLLTLLSGLLFSLmsSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLND 224
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 2-204 3.11e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 108.80  E-value: 3.11e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218   2 IFSLNWISTLIGLFFIPQLCWLMMSRILFLLINFLMILWMEFKIiLKNNFNMNNLLFYISLFMFILMNNFLGLFPYIFTS 81
Cdd:MTH00173  19 LSFLMWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTR-SSGLNLGGFSLLLSSLFLFLISLNLSGLLPFVFSV 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218  82 SSHLIYSLSLSLPMWLGLMIFGWVKNTNFMFAHLVPQGTPFVLMFFMVLIESLSNIIRPFTLSIRLTANMIAGHLLLTLL 161
Cdd:MTH00173  98 TSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLTVRLLANISAGHIVLTLI 177

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 359292218 162 SSFIPNFLLFYLIVLFLQLVL-----LILEVSVSMIQSYVFVILMILY 204
Cdd:MTH00173 178 GNYLSSSLFSSSVVSLLLVLLiqvgyFIFEVAVMLIQAYIFTLLIKLY 225
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 60-207 4.20e-27

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 103.13  E-value: 4.20e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218  60 ISLFMFILMNNFLGLFPYIFTSSSHLIYSLSLSLPMWLGLMIFGWVKNTNFMFAHLVPQGTPFVLMFFMVLIESLSNIIR 139
Cdd:MTH00035  77 TTVFILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQ 156

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 359292218 140 PFTLSIRLTANMIAGHLLLTLLSSFI---PNFLLFYLIVLFLQLVLLILEVSVSMIQSYVFVILMILYLKE 207
Cdd:MTH00035 157 PIALGLRLAANLTAGHLLIFLLSTAIwelSNSPLISIITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 61-207 4.21e-27

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 103.03  E-value: 4.21e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218  61 SLFMFILMNNFLGLFPYIFTSSSHLIYSLSLSLPMWLGLMIFGWVKNTNFMFAHLVPQGTPFVLMFFMVLIESLSNIIRP 140
Cdd:MTH00132  75 SLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRP 154

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 359292218 141 FTLSIRLTANMIAGHLLLTLLSSFIpnFLLFYL------IVLFLQLVLLILEVSVSMIQSYVFVILMILYLKE 207
Cdd:MTH00132 155 LALGVRLTANLTAGHLLIQLIATAA--FVLLPLmptvaiLTATLLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 3-207 1.03e-26

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 101.95  E-value: 1.03e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218   3 FSLNWISTLIGLFFIPQLCWLMMSRILFLLINFLMILWMEFKIILKNNFNMNNLLFYISLFMFILMNNFLGLFPYIFTSS 82
Cdd:MTH00179  17 IPLLALALLLPWLLFPSLTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLFLLTLNLLGLLPYTFTPT 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218  83 SHLIYSLSLSLPMWLGLMIFGWVKNTNFMFAHLVPQGTPFVLMFFMVLIESLSNIIRPFTLSIRLTANMIAGHLLLTLLS 162
Cdd:MTH00179  97 TQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVRLTANITAGHLLMHLIS 176

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 359292218 163 S----FIPNFLLFYLIVLFLQLVLLILEVSVSMIQSYVFVILMILYLKE 207
Cdd:MTH00179 177 SavfvLMNFMGMVALLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 60-207 2.73e-25

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 98.12  E-value: 2.73e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218  60 ISLFMFILMNNFLGLFPYIFTSSSHLIYSLSLSLPMWLGLMIFGWVKNTNFMFAHLVPQGTPFVLMFFMVLIESLSNIIR 139
Cdd:MTH00073  74 TSLMVFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIR 153

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 359292218 140 PFTLSIRLTANMIAGHLLLTLLSS----FIPNFLLFYLIVLFLQLVLLILEVSVSMIQSYVFVILMILYLKE 207
Cdd:MTH00073 154 PLALGVRLTANLTAGHLLIQLISTatlvLLPLMPTVSILTMIVLFLLTLLEIAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 60-205 1.96e-24

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 95.79  E-value: 1.96e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218  60 ISLFMFILMNNFLGLFPYIFTSSSHLIYSLSLSLPMWLGLMIFGWVKNTNFMFAHLVPQGTPFVLMFFMVLIESLSNIIR 139
Cdd:MTH00101  73 MSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQ 152

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 359292218 140 PFTLSIRLTANMIAGHLL--------LTLLSSFIPNFLLfyliVLFLQLVLLILEVSVSMIQSYVFVILMILYL 205
Cdd:MTH00101 153 PMALAVRLTANITAGHLLihliggatLALMSISTTTALI----TFIILILLTILEFAVALIQAYVFTLLVSLYL 222
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 61-204 1.10e-23

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 94.03  E-value: 1.10e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218  61 SLFMFILMNNFLGLFPYIFTSSSHLIYSLSLSLPMWLGLMIFGWVKNTNFMFAHLVPQGTPFVLMFFMVLIESLSNIIRP 140
Cdd:MTH00005  79 ALFTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRP 158

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 359292218 141 FTLSIRLTANMIAGHLLLTLLSSFIPNFLLFYLIVLFLQLVL----LILEVSVSMIQSYVFVILMILY 204
Cdd:MTH00005 159 ITLSFRLAANMSAGHIVLSLIGIYAASALFSSISSTILLILTqmgyILFEVGICLIQAYIFCLLLSLY 226
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 60-208 1.55e-21

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 88.91  E-value: 1.55e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218  60 ISLFMFILMNNFLGLFPYIFTSSSHLIYSLSLSLPMWLGLMIFGWVKNTNFMFAHLVPQGTPFVLMFFMVLIESLSNIIR 139
Cdd:MTH00175  87 LSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIR 166

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 359292218 140 PFTLSIRLTANMIAGHLLLTLLSSFIPNFLL-----FYLIVLFLQLVLLILEVSVSMIQSYVFVILMILYLKET 208
Cdd:MTH00175 167 AISLGVRLAANISAGHLLFAILSGFAFNMLSngliiLSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLGDT 240
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 59-208 2.01e-21

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 88.17  E-value: 2.01e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218  59 YISLFMFILMNNFLGLFPYIFTSSSHLIYSLSLSLPMWLGLMIFGWVKNTNFMFAHLVPQGTPFVLMFFMVLIESLSNII 138
Cdd:MTH00172  75 IISLFFFIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYIS 154

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 359292218 139 RPFTLSIRLTANMIAGHLLLTLLSSFIPNFL----LFYLIVLFLQLVLLILEVSVSMIQSYVFVILMILYLKET 208
Cdd:MTH00172 155 RAISLGVRLAANLSAGHLLFAILAGFGFNMLcasgFLSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIYLADT 228
ATP-synt_A pfam00119
ATP synthase A chain;
61-206 1.01e-20

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 86.00  E-value: 1.01e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218   61 SLFMFILMNNFLGLF---PYIFTSSSHLIYSLSLSLPMWLGLMIFGWVKN-TNFMFAHLVPQGTPFVLMFFMVLIESLSN 136
Cdd:pfam00119  63 TLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISE 142

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 359292218  137 IIRPFTLSIRLTANMIAGHLLLTLLSSFIPNFLLFYLIVLFLQLVLLIL----EVSVSMIQSYVFVILMILYLK 206
Cdd:pfam00119 143 FARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVIPPLLGVAwtlfELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 61-205 4.95e-18

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 78.58  E-value: 4.95e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218  61 SLFMFILMNNFLGLFPYIFTSSSHLIYSLSLSLPMWLGLMIFGWVKNTNFMFAHLVPQGTPFVLMFFMVLIESLSNIIRP 140
Cdd:COG0356   63 TLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKGLGGYLKHLFFPPFPWLAPLMLPIEIISELARP 142

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 359292218 141 FTLSIRLTANMIAGHLLLTLLSSFIPnFLLFYLIVLFLQLVLLILEVSVSMIQSYVFVILMILYL 205
Cdd:COG0356  143 LSLSLRLFGNMFAGHIILLLLAGLAP-FLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYI 206
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 60-207 2.16e-16

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 74.45  E-value: 2.16e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218  60 ISLFMFILMNNFLGLFP-YIFTSSSHLIYSLSLSLPMWLGLMIFG-WVKNTNFMFAHLVPQGTPFvlmffMVLIESLSNI 137
Cdd:PRK05815  77 FTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGiKKKGLGGYLKEFYLQPHPL-----LLPIEIISEF 151

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218 138 IRPFTLSIRLTANMIAGHLLLTLLSSFIPNFLLFYLIVLFLQLVLLILEVSVSMIQSYVFVILMILYLKE 207
Cdd:PRK05815 152 SRPISLSLRLFGNMLAGELILALIALLGGAGLLLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVYISM 221
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 60-208 5.66e-15

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 71.12  E-value: 5.66e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218  60 ISLFMFILMNNFLGLFPYIFTSSSHLIYSLSLSLPMWLGLMIFGWVKNTNFMFAHLVPQGTPFVLMFFMVLIESLSNIIR 139
Cdd:MTH00174  95 LSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISR 174

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 359292218 140 PFTLSIRLTANMIAGHLLLTLLSSFI-----PNFLLFYLIVLFLQLVLLILEVSVSMIQSYVFVILMILYLKET 208
Cdd:MTH00174 175 AISLGVRLAANISSGHLLFSIIASFAwkminTGILIGSFVPFAILIFVTILEMAVAIIQAYVFTLLTIVYLRDT 248
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 60-205 1.61e-10

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 59.37  E-value: 1.61e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218  60 ISLFMFILMNNFLGLFPYIFTSSSHLIYSLSLSLPMWLgLMIFGWVKNTNF--MFAHLVpQGTPFVLMFFMVLIESLSNI 137
Cdd:PRK13419 175 LTVFFFILVCNLLGLVPYGATATGNINVTLTLAVFTFF-ITQYAAIKAHGIkgYLAHLT-GGTHWSLWIIMIPIEFIGLF 252

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 359292218 138 IRPFTLSIRLTANMIAGH---LLLTLLSSFIPNFLLFYLIVLFLQLVLLILEVSVSMIQSYVFVILMILYL 205
Cdd:PRK13419 253 TKPFALTVRLFANMTAGHiviLSLIFISFILKSYIVAVAVSVPFAIFIYLLELFVAFLQAYIFTMLSALFI 323
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 61-207 5.41e-07

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 48.05  E-value: 5.41e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218  61 SLFMFILMNNFLGLFPYIFTSSSHLIYSLSLSLPMWLGlMIFGWVKNTNFMFAHLVPQGTPFVLMFFMVLIESLSNIIRP 140
Cdd:MTH00087  57 FTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLS-TFLSFLSKSEKFSVYLSKGSDSFLKTFSMLFVEIVSELSRP 135

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 359292218 141 FTLSIRLTANMIAGHLLLTLLSSFIPNFLLFYlivlflqLVLLILEVSVSMIQSYVFVILMILYLKE 207
Cdd:MTH00087 136 LALTLRLTVNLMVGHLISSLLNFLGEKYVWLS-------ILAIMMECFVAFIQSYIFSRLIYLYLNE 195
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 88-205 8.09e-05

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 42.57  E-value: 8.09e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218  88 SLSLSLPMWLGLMIFGWVKNTNFMFAHLVPQGTPFVLMFFMVLIESL-SNIIRPFTLSIRLTANMIAGHLLLTLLSSFIP 166
Cdd:PRK13417 225 TMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVIILALMGFIF 304

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 359292218 167 NF--LLFYLIVLFLQLVLLILEVSVSMIQSYVFVILMILYL 205
Cdd:PRK13417 305 QFqsWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLFV 345
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 43-154 6.15e-03

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 36.02  E-value: 6.15e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359292218  43 FKIILKNNFNMNNLLFYISLFMFILMNNFLGL-FPYIFTSSSHLIYSLSLSLPMWLGLMIFGWVKNTNFMFAHLVPQGTP 121
Cdd:MTH00050   9 LFSLIYKLILGGSVSYYYSVVLFIVLFLFLLYrLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTP 88

                         90       100       110
                 ....*....|....*....|....*....|...
gi 359292218 122 FVLMFFMVLIESLSNIIRPFTLSIRLTANMIAG 154
Cdd:MTH00050  89 LYICPFVCIAETISYIIRPVVLILRPFINISLG 121
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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