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Conserved domains on  [gi|385282774|gb|AFI57967|]
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DnaJ, partial [Bacillus subtilis subsp. subtilis]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK14280 super family cl36354
molecular chaperone DnaJ;
1-237 9.28e-150

molecular chaperone DnaJ;


The actual alignment was detected with superfamily member PRK14280:

Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 421.82  E-value: 9.28e-150
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDINKEAGSDEKFKEVKEAYETLSDDQKRAHYDQFGHTDPNQGFAGGGFGGGDFGGFGF-DDIFSSIFGGGTRRRDP 79
Cdd:PRK14280  31 KYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGGGGFGGGDFGGGFGfEDIFSSFFGGGGRRRDP 110

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  80 NAPRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCGGSGQLNVEQNTPFGKVVNRRVCH 159
Cdd:PRK14280 111 NAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCP 190

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 385282774 160 HCAGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLFVVFHVRAHEFFERDGDD 237
Cdd:PRK14280 191 HCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDD 268
 
Name Accession Description Interval E-value
PRK14280 PRK14280
molecular chaperone DnaJ;
1-237 9.28e-150

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 421.82  E-value: 9.28e-150
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDINKEAGSDEKFKEVKEAYETLSDDQKRAHYDQFGHTDPNQGFAGGGFGGGDFGGFGF-DDIFSSIFGGGTRRRDP 79
Cdd:PRK14280  31 KYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGGGGFGGGDFGGGFGfEDIFSSFFGGGGRRRDP 110

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  80 NAPRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCGGSGQLNVEQNTPFGKVVNRRVCH 159
Cdd:PRK14280 111 NAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCP 190

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 385282774 160 HCAGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLFVVFHVRAHEFFERDGDD 237
Cdd:PRK14280 191 HCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDD 268
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 1-237 9.80e-107

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 311.84  E-value: 9.80e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774    1 KYHPDINKEAGSDEKFKEVKEAYETLSDDQKRAHYDQFGHTDPNQGFAGGGFGGGDFGGFGFDD---IFSSIFGG--GTR 75
Cdd:TIGR02349  27 KYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGGFNGFDIGFFGDfgdIFGDFFGGggGSG 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   76 RRDPNAPRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCGGSGQLNVEQNTPFGKVVNR 155
Cdd:TIGR02349 107 RRRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQ 186

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  156 RVCHHCAGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLFVVFHVRAHEFFERDG 235
Cdd:TIGR02349 187 QTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDG 266


                  ..
gi 385282774  236 DD 237
Cdd:TIGR02349 267 ND 268
DnaJ_C pfam01556
DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It ...
 88-237 2.43e-55

DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. The two C-terminal domains CTDI and CTDII, both incorporated in this family are necessary for maintaining the J-domains in their specific relative positions. Structural analysis of PDB:1nlt shows that PF00684 is nested within this DnaJ C-terminal region.


Pssm-ID: 460251 [Multi-domain]  Cd Length: 213  Bit Score: 176.29  E-value: 2.43e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   88 LQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCGGSGQLNVEqntpFGKVVNRRVCHHCAGTGKI 167
Cdd:pfam01556   1 LEYELELTLEEAYFGCTKKIKITRNVICDTCGGSGAKPGTSPKTCPCCGGGGQVRRQ----FGFFSTCTCCPCCGGGGKI 76

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  168 IKNKCADCGGKGKIKKRKKiNVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLFVVFHVRAHEFFERDGDD 237
Cdd:pfam01556  77 IDKCCKCCGGGGVVEKKTL-EVKIPAGVDDGQRIRLRGEGDAGENGGPPGDLYVVIRVKPHPVFRRDGDD 145
DnaJ_C cd10747
C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 ...
 86-237 1.87e-30

C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70.


Pssm-ID: 199909 [Multi-domain]  Cd Length: 158  Bit Score: 110.59  E-value: 1.87e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  86 ADLQYTMTLSFEDAAFGKETTIEIPREETcetckgsgakpgtnpetcshcggsgqlnveqntpfgkVVNRRvchhcagtg 165
Cdd:cd10747    1 ADLRYDLELTLEEAYFGKEKEIKIPRKVT-------------------------------------RVREK--------- 34

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 385282774 166 KIIKnkcadcggkgkikkrkkinVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLFVVFHVRAHEFFERDGDD 237
Cdd:cd10747   35 KTLT-------------------VKIPAGVDDGQRLRLRGEGDAGPNGGPPGDLYVVIRVKPHPVFRRDGND 87
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 1-40 1.89e-17

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 75.89  E-value: 1.89e-17
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 385282774   1 KYHPDINK-EAGSDEKFKEVKEAYETLSDDQKRAHYDQFGH 40
Cdd:COG0484   27 KYHPDRNPgDPEAEEKFKEINEAYEVLSDPEKRAAYDRFGH 67
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
1-40 8.66e-15

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 72.93  E-value: 8.66e-15
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDINKEAGSDEKFKEVKEAYETLSDDQKRAHYDQFGH 40
Cdd:NF037946  32 KYHPDRNKAPDAAEIFAEINEAYEVLSNPEKRANYDKYGH 71
DnaJ smart00271
DnaJ molecular chaperone homology domain;
1-31 7.71e-09

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 50.70  E-value: 7.71e-09
                           10        20        30
                   ....*....|....*....|....*....|...
gi 385282774     1 KYHPDINK--EAGSDEKFKEVKEAYETLSDDQK 31
Cdd:smart00271  28 KYHPDKNPgdKEEAEEKFKEINEAYEVLSDPEK 60
 
Name Accession Description Interval E-value
PRK14280 PRK14280
molecular chaperone DnaJ;
1-237 9.28e-150

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 421.82  E-value: 9.28e-150
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDINKEAGSDEKFKEVKEAYETLSDDQKRAHYDQFGHTDPNQGFAGGGFGGGDFGGFGF-DDIFSSIFGGGTRRRDP 79
Cdd:PRK14280  31 KYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGGGGFGGGDFGGGFGfEDIFSSFFGGGGRRRDP 110

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  80 NAPRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCGGSGQLNVEQNTPFGKVVNRRVCH 159
Cdd:PRK14280 111 NAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCP 190

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 385282774 160 HCAGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLFVVFHVRAHEFFERDGDD 237
Cdd:PRK14280 191 HCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDD 268
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 1-237 5.10e-122

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 351.23  E-value: 5.10e-122
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDINKEAGSDEKFKEVKEAYETLSDDQKRAHYDQFGHTDPNQGFAGGGFGGGDFGGFgfddIFSSIFGGGTRRRDPN 80
Cdd:PRK14287  31 KYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFGGGGAGDFGGFSD----IFDMFFGGGGGRRNPN 106

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  81 APRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCGGSGQLNVEQNTPFGKVVNRRVCHH 160
Cdd:PRK14287 107 APRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHH 186

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 385282774 161 CAGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLFVVFHVRAHEFFERDGDD 237
Cdd:PRK14287 187 CEGTGKIIKQKCATCGGKGKVRKRKKINVKVPAGIDHGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDD 263
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 1-235 4.09e-111

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 323.96  E-value: 4.09e-111
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDINKEAGSDEKFKEVKEAYETLSDDQKRAHYDQFGHTDPNQGFAGGGFGGGDFGGFGF----DDIFSSIFGGGTRR 76
Cdd:PRK14276  31 KYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGAGGFGGFDGSGGfggfEDIFSSFFGGGGAR 110

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  77 RDPNAPRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCGGSGQLNVEQNTPFGKVVNRR 156
Cdd:PRK14276 111 RNPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRRQV 190

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 385282774 157 VCHHCAGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLFVVFHVRAHEFFERDG 235
Cdd:PRK14276 191 TCDVCHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVETGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDG 269
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 1-237 9.80e-107

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 311.84  E-value: 9.80e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774    1 KYHPDINKEAGSDEKFKEVKEAYETLSDDQKRAHYDQFGHTDPNQGFAGGGFGGGDFGGFGFDD---IFSSIFGG--GTR 75
Cdd:TIGR02349  27 KYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGGFNGFDIGFFGDfgdIFGDFFGGggGSG 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   76 RRDPNAPRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCGGSGQLNVEQNTPFGKVVNR 155
Cdd:TIGR02349 107 RRRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQ 186

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  156 RVCHHCAGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLFVVFHVRAHEFFERDG 235
Cdd:TIGR02349 187 QTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDG 266


                  ..
gi 385282774  236 DD 237
Cdd:TIGR02349 267 ND 268
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 1-237 1.32e-99

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 294.36  E-value: 1.32e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDIN---KEAgsDEKFKEVKEAYETLSDDQKRAHYDQFGHTDPNQGFAGGGFGGGDFGGFGFDDIFSSIFGGGTRRR 77
Cdd:PRK10767  31 KYHPDRNpgdKEA--EEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGGGGFGGGGGFGDIFGDIFGDIFGGGRGGG 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  78 DPNAPRqGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCGGSGQLNVEQntpfGKVVNRRV 157
Cdd:PRK10767 109 RQRARR-GADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQQ----GFFTVQQT 183

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774 158 CHHCAGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLFVVFHVRAHEFFERDGDD 237
Cdd:PRK10767 184 CPTCHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRIRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGND 263
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 1-237 7.41e-89

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 267.44  E-value: 7.41e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDIN---KEAgsDEKFKEVKEAYETLSDDQKRAHYDQFGH--TDPNQGFAGGGFGGGDFGGFGF----------DDI 65
Cdd:PRK14277  32 KYHPDLNpgdKEA--EQKFKEINEAYEILSDPQKRAQYDQFGHaaFDPGGFGQGGFGQGGFGGGGFDfdfggfgdifEDI 109

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  66 FSSIFGGGtRRRDPNAPRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCGGSGQLNVEQ 145
Cdd:PRK14277 110 FGDFFGTG-RRRAETGPQKGADIRYDLELTFEEAAFGTEKEIEVERFEKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTRQ 188

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774 146 NTPFGKVVNRRVCHHCAGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLFVVFHV 225
Cdd:PRK14277 189 NTPFGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRRKIKVNIPAGIDDGQMITLRGEGEPGIKGGPNGDLYIVIKV 268

                        250
                 ....*....|..
gi 385282774 226 RAHEFFERDGDD 237
Cdd:PRK14277 269 KPHPLFKREGYN 280
PRK14297 PRK14297
molecular chaperone DnaJ;
1-237 6.54e-85

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 257.40  E-value: 6.54e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDIN---KEAgsDEKFKEVKEAYETLSDDQKRAHYDQFGHTDPNQGFAGGGF---GGGDFGGFGFDDIFSSIFGGG- 73
Cdd:PRK14297  31 KYHPDKNkgnKEA--EEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGGFGSGgfgGFDFSDMGGFGDIFDSFFGGGf 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  74 ---TRRRdpNAPRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCGGSGQLNVEQNTPFG 150
Cdd:PRK14297 109 gssSRRR--NGPQRGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKPGTSPKTCDKCGGTGQIRVQRNTPLG 186

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774 151 KVVNRRVCHHCAGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLFVVFHVRAHEF 230
Cdd:PRK14297 187 SFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKT 266


                 ....*..
gi 385282774 231 FERDGDD 237
Cdd:PRK14297 267 FKRKGFD 273
PRK14293 PRK14293
molecular chaperone DnaJ;
1-235 1.28e-84

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 256.07  E-value: 1.28e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDINKEAGSDEKFKEVKEAYETLSDDQKRAHYDQFGHTDPNqgfaGGGFGGGDFGGFGFDDIFSSIF------GGGT 74
Cdd:PRK14293  30 KYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVS----GAAGFPDMGDMGGFADIFETFFsgfggaGGQG 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  75 RRRDPNAPRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCGGSGQLNVEQNTPFGKVVN 154
Cdd:PRK14293 106 GRRRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGTGPTTCSTCGGAGQVRRATRTPFGSFTQ 185

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774 155 RRVCHHCAGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLFVVFHVRAHEFFERD 234
Cdd:PRK14293 186 VSECPTCNGTGQVIEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVSGEGDAGLRGGPPGDLYVYLFVKNDPEFRRD 265


                 .
gi 385282774 235 G 235
Cdd:PRK14293 266 G 266
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 1-237 1.62e-84

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 256.31  E-value: 1.62e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDINKEAGSDEKFKEVKEAYETLSDDQKRAHYDQFGHTDPNqGFAGGGFGGGDFGGFGFDDIFSSIFGGGTRRRdPN 80
Cdd:PRK14298  32 KYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGID-NQYSAEDIFRGADFGGFGDIFEMFFGGGGRRG-RM 109

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  81 APRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCGGSGQLNVEQNTPFGKVVNRRVCHH 160
Cdd:PRK14298 110 GPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCST 189

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 385282774 161 CAGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLFVVFHVRAHEFFERDGDD 237
Cdd:PRK14298 190 CHGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGADSGLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDD 266
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 1-237 9.68e-75

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 230.81  E-value: 9.68e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDIN---KEAgsDEKFKEVKEAYETLSDDQKRAHYDQFGHTDPNqgfagggfGGGDFGGFGFDDIFSSI-------- 69
Cdd:PRK14294  31 KYHPDRNpgdKEA--EELFKEAAEAYEVLSDPKKRGIYDQYGHEGLS--------GTGFSGFSGFDDIFSSFgdifedff 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  70 -FGGGTRRRDPNAPRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCGGSGQlnVEQNTP 148
Cdd:PRK14294 101 gFGGGRRGRSRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEPGTSPTTCPQCGGSGQ--VTQSQG 178

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774 149 FGKVvnRRVCHHCAGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLFVVFHVRAH 228
Cdd:PRK14294 179 FFSI--RTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRLRLRGEGEAGVRGGPPGDLYVFLTVEPH 256


                 ....*....
gi 385282774 229 EFFERDGDD 237
Cdd:PRK14294 257 EFFERDGND 265
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 1-237 2.40e-73

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 227.40  E-value: 2.40e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDINKEAGSDEKFKEVKEAYETLSDDQKRAHYDQFGHT--DPNQGFAGGGFGGGDFGGFGFDDIFSSIF-----GGG 73
Cdd:PRK14283  32 KYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAgmDGFSQEDIFNNINFEDIFQGFGFGIGNIFdmfgfGGG 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  74 TRRrdpnAPRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCGGSGQLNVEQNTPFGKVV 153
Cdd:PRK14283 112 SRH----GPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMM 187

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774 154 NRRVCHHCAGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLFVVFHVRAHEFFER 233
Cdd:PRK14283 188 NVTTCPDCQGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRR 267


                 ....
gi 385282774 234 DGDD 237
Cdd:PRK14283 268 EGAN 271
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 1-237 5.37e-72

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 223.85  E-value: 5.37e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDIN-KEAGSDEKFKEVKEAYETLSDDQKRAHYDQFGHTDPNQGFAGGGFGGGDFGGFGFDDIFSSIFG--GGTRRR 77
Cdd:PRK14301  31 QYHPDRNpDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGGFGGFSSAEDIFSHFSDIFGDLFGfsGGGSRR 110

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  78 DPNaPRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCGGSGQlnVEQNTPFGKVVNRrv 157
Cdd:PRK14301 111 GPR-PQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQ--VRQSQGFFQIAVP-- 185

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774 158 CHHCAGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLFVVFHVRAHEFFERDGDD 237
Cdd:PRK14301 186 CPVCRGEGRVITHPCPKCKGSGIVQQTRELKVRIPAGVDTGSRLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQD 265
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 1-237 1.11e-66

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 210.23  E-value: 1.11e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDINK-EAGSDEKFKEVKEAYETLSDDQKRAHYDQFGHTDPNQGFAGGGFGGGDFGGF---GFDDIFSSIFGGGTR- 75
Cdd:PRK14286  31 KYHPDKNKgNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGGFGQGAYTDFSDifgDFGDIFGDFFGGGRGg 110

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  76 -----RRdpNAPRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCGGSGQLNVEQNtpFG 150
Cdd:PRK14286 111 gsgggRR--SGPQRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQG--FF 186

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774 151 KVVNrrVCHHCAGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLFVVFHVRAHEF 230
Cdd:PRK14286 187 SVAT--TCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIKIPPGVETGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHEL 264


                 ....*..
gi 385282774 231 FERDGDD 237
Cdd:PRK14286 265 FERQGND 271
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 1-237 8.33e-64

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 202.72  E-value: 8.33e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDIN----KEAgsDEKFKEVKEAYETLSDDQKRAHYDQFGHT---DPNQGFAGGGFGGG----DFGGFGFDDIFSSI 69
Cdd:PRK14282  31 EWHPDRHpenrKEA--EQKFKEIQEAYEVLSDPQKRAMYDRFGYVgeqPPYQETESGGGFFEdifkDFENIFNRDIFDIF 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  70 FGG-GTRRRDPNAPRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCGGSGQLNVEQNTP 148
Cdd:PRK14282 109 FGErRTQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSF 188

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774 149 FGKVVNRRVCHHCAGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLFVVFHVRAH 228
Cdd:PRK14282 189 FGVFVSERTCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVKIPAGVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPD 268


                 ....*....
gi 385282774 229 EFFERDGDD 237
Cdd:PRK14282 269 PRFKRSGSD 277
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 1-237 3.23e-63

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 201.96  E-value: 3.23e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDIN---KEAgsDEKFKEVKEAYETLSDDQKRAHYDQFGHTDPNQGFAGGGFGGGDFGGFGFDDIFSS--------- 68
Cdd:PRK14281  30 KYHPDKNpdnKEA--EEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGGGPGYGGGGGDFNDIFSAfndmfggga 107

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  69 ------------IFGGGTRRRDPNAPRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNpETCSHCG 136
Cdd:PRK14281 108 rrgggspfgfedVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLKIKKQVPCKECNGTGSKTGAT-ETCPTCH 186

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774 137 GSGQLNVEQNTPFGKVVNRRVCHHCAGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPGINGGPA 216
Cdd:PRK14281 187 GSGEVRQASKTMFGQFVNITACPTCGGEGRVVKDRCPACYGEGIKQGEVTVKVTVPAGVQDGNYLTLRGQGNAGPRGGAP 266

                        250       260
                 ....*....|....*....|.
gi 385282774 217 GDLFVVFHVRAHEFFERDGDD 237
Cdd:PRK14281 267 GDLIVVIEEKPHELFVRNGDD 287
PRK14279 PRK14279
molecular chaperone DnaJ;
3-237 6.79e-60

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 193.41  E-value: 6.79e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   3 HPDINK-EAGSDEKFKEVKEAYETLSDDQKRAHYDQF-------------------------GHTDPNQGFAGGGFGGGD 56
Cdd:PRK14279  38 HPDANPgDPAAEERFKAVSEAHDVLSDPAKRKEYDETrrlfagggfggrrfdggggfggfgtGGDGAEFNLNDLFDAAGR 117

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  57 FGGFGFDDIFSSIFGGGTRRRDPNAPRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCG 136
Cdd:PRK14279 118 GGGGGIGDLFGGLFNRGGGSARPSRPRRGNDLETETTLDFVEAAKGVTMPLRLTSPAPCTTCHGSGARPGTSPKVCPTCN 197

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774 137 GSGQLNVEQNTpFGkvvNRRVCHHCAGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPGINGGPA 216
Cdd:PRK14279 198 GSGVISRNQGA-FG---FSEPCTDCRGTGSIIEDPCEECKGTGVTTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPS 273

                        250       260
                 ....*....|....*....|.
gi 385282774 217 GDLFVVFHVRAHEFFERDGDD 237
Cdd:PRK14279 274 GDLYVTVHVRPDKVFGRDGDD 294
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 1-237 4.03e-58

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 188.44  E-value: 4.03e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDINKEAGSDEKFKEVKEAYETLSDDQKRAHYDQFGHtDPNQGFAGGGFGGGDFGGFGFDDI------------FSS 68
Cdd:PRK14291  30 KYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLYDQFGH-AAFSGSGQQQQGQEGFSDFGGGNIediledvfdifgFGD 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  69 IFGG----GTRRRDPNAPRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCGGSGQLNve 144
Cdd:PRK14291 109 IFGRrratRERRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCEACGGTGYDPGSGEKVCPTCGGSGEIY-- 186

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774 145 QNTPFGKVvnRRVCHHCAGTGkIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLFVVFH 224
Cdd:PRK14291 187 QRGGFFRI--SQTCPTCGGEG-VLREPCSKCNGRGLVIKKETIKVRIPPGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVK 263

                        250
                 ....*....|...
gi 385282774 225 VRAHEFFERDGDD 237
Cdd:PRK14291 264 VKPHPLFERRGDN 276
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 1-237 9.04e-58

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 187.57  E-value: 9.04e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDINKEAGSDEKFKEVKEAYETLSDDQKRAHYDQFGhtDPnQGFAGGGFGGGDFGGFGFDDIFSSIFGGGTRRRDPN 80
Cdd:PRK14278  30 ELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIVDLGG--DP-LESAGGGGGGFGGGFGGLGDVFEAFFGGGAASRGPR 106

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  81 AP-RQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCGGSGQLNVEQNTPFGKVVNRRVCH 159
Cdd:PRK14278 107 GRvRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKGTAGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCP 186

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 385282774 160 HCAGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLFVVFHVRAHEFFERDGDD 237
Cdd:PRK14278 187 TCRGVGEVIPDPCHECAGDGRVRARREITVKIPAGVGDGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDD 264
PRK14295 PRK14295
molecular chaperone DnaJ;
1-237 1.31e-55

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 182.36  E-value: 1.31e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDINK-EAGSDEKFKEVKEAYETLSDDQKRAHYDQ----FGH----TDPNQGF-------------AGGGFGGGDFG 58
Cdd:PRK14295  36 EYHPDANKgDAKAEERFKEISEAYDVLSDEKKRKEYDEarslFGNggfrPGPGGGGgggfnfdlgdlfgGGAQGGGGAGG 115

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  59 GFGFDDIFSSIFGGGTRRrdpNAPRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCGGS 138
Cdd:PRK14295 116 GGGLGDVFGGLFNRGGRR---TQPRRGADVESEVTLSFTEAIDGATVPLRLTSQAPCPACSGTGAKNGTTPRVCPTCSGT 192

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774 139 GQLNveqnTPFGKVVNRRVCHHCAGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPGINGGPAGD 218
Cdd:PRK14295 193 GQVS----RNSGGFSLSEPCPDCKGRGLIADDPCLVCKGSGRAKSSRTMQVRIPAGVSDGQRIRLRGKGAPGERGGPAGD 268

                        250
                 ....*....|....*....
gi 385282774 219 LFVVFHVRAHEFFERDGDD 237
Cdd:PRK14295 269 LYVVVHVDPHPVFGRSGDN 287
DnaJ_C pfam01556
DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It ...
 88-237 2.43e-55

DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. The two C-terminal domains CTDI and CTDII, both incorporated in this family are necessary for maintaining the J-domains in their specific relative positions. Structural analysis of PDB:1nlt shows that PF00684 is nested within this DnaJ C-terminal region.


Pssm-ID: 460251 [Multi-domain]  Cd Length: 213  Bit Score: 176.29  E-value: 2.43e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   88 LQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCGGSGQLNVEqntpFGKVVNRRVCHHCAGTGKI 167
Cdd:pfam01556   1 LEYELELTLEEAYFGCTKKIKITRNVICDTCGGSGAKPGTSPKTCPCCGGGGQVRRQ----FGFFSTCTCCPCCGGGGKI 76

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  168 IKNKCADCGGKGKIKKRKKiNVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLFVVFHVRAHEFFERDGDD 237
Cdd:pfam01556  77 IDKCCKCCGGGGVVEKKTL-EVKIPAGVDDGQRIRLRGEGDAGENGGPPGDLYVVIRVKPHPVFRRDGDD 145
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 1-235 4.57e-52

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 172.51  E-value: 4.57e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDINKEAGSDEKFKEVKEAYETLSDDQKRAHYDQFGHTDPNQGFAGGGFGGGDFGGFGFDDIFSSIF----GGGTRR 76
Cdd:PRK14300  30 QYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRGGGGNHGGFHPDINDIFGDFFsdfmGGSRRS 109

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  77 RDPNAPRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCGGSGQLNVEQntpfGKVVNRR 156
Cdd:PRK14300 110 RPTSSKVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGETVTTCDACSGVGATRMQQ----GFFTIEQ 185

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 385282774 157 VCHHCAGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLFVVFHVRAHEFFERDG 235
Cdd:PRK14300 186 ACHKCQGNGQIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRIRHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDG 264
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 1-237 4.15e-50

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 167.37  E-value: 4.15e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDINKEAGSDEKFKEVKEAYETLSDDQKRAHYDQFGHTdpnQGFAGGGFGGGDFGGFGFDDIFSSIFGGGTR--RRD 78
Cdd:PRK14292  29 KYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTA---PGAGMPGGDPFGGMGFDPMDIFEQLFGGAGFggGRG 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  79 PNAPRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNP-ETCSHCGGSGQLNVEQNTPFGKVVNRRV 157
Cdd:PRK14292 106 RRGPARGDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPpKTCPTCRGAGAVRAQARTIFGVVETQQP 185

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774 158 CHHCAGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPGINGGpaGDLFVVFHVRAHEFFERDGDD 237
Cdd:PRK14292 186 CPTCRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRVAGMGNEGPGGN--GDLYVHIEMEPHPELRREQEH 263
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 1-237 8.65e-50

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 167.33  E-value: 8.65e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDINK-EAGSDEKFKEVKEAYETLSDDQKRAHYDQFGHTDPNQGFAGGGFGGGDFGGFG--------------FDDI 65
Cdd:PRK14284  28 KYHPDKNPgDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFGGAGMGNMEDAlrtfmgafggefggGGSF 107

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  66 FSSIFGGGTR----RRDPNAPRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCGGSGQL 141
Cdd:PRK14284 108 FEGLFGGLGEafgmRGGPAGARQGASKKVHITLSFEEAAKGVEKELLVSGYKSCDACSGSGANSSQGIKVCDRCKGSGQV 187

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774 142 nVEQNTPFGKVVnrrVCHHCAGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLFV 221
Cdd:PRK14284 188 -VQSRGFFSMAS---TCPECGGEGRVITDPCSVCRGQGRIKDKRSVHVHIPAGVDSGMRLKMEGYGDAGQNGAPAGDLYV 263

                        250
                 ....*....|....*.
gi 385282774 222 VFHVRAHEFFERDGDD 237
Cdd:PRK14284 264 FIDVEPHPVFERRGDD 279
PRK14289 PRK14289
molecular chaperone DnaJ;
1-237 2.08e-47

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 160.77  E-value: 2.08e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDIN---KEAgsDEKFKEVKEAYETLSDDQKRAHYDQFGHTDPNQGFAGGGFGGGDFGGFGFDDIFSSIF------- 70
Cdd:PRK14289  32 QYHPDKNpgdKEA--EEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAAGGGGFSGEGMSMEDIFSMFGDIFgghgggf 109

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  71 -------GGGTRRRdpnaPRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCGGSGQLNV 143
Cdd:PRK14289 110 ggfggfgGGGSQQR----VFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTR 185

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774 144 EQNTPFGKVVNRRVCHHCAGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLFVVF 223
Cdd:PRK14289 186 VQNTILGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVI 265

                        250
                 ....*....|....
gi 385282774 224 HVRAHEFFERDGDD 237
Cdd:PRK14289 266 EEEPHPELIRDEND 279
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 1-232 4.54e-47

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 159.73  E-value: 4.54e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDINKEAGSDEKFKEVKEAYETLSDDQKRAHYDQFGHTDPNQGFAGGG---------FGGGDFGGFGFDDIFSSIFG 71
Cdd:PRK14296  31 QYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSGFSSnfgdfedlfSNMGSSGFSSFTNIFSDFFG 110

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  72 GGtrRRDPNAPRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCGGSGQLNVEQNTPFGK 151
Cdd:PRK14296 111 SN--KSDYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQ 188

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774 152 VVNRRVCHHCAGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLFVVFHVRAHEFF 231
Cdd:PRK14296 189 FQQSAKCNVCNGAGKIIKNKCKNCKGKGKYLERKKIEVNIPKGIRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVF 268


                 .
gi 385282774 232 E 232
Cdd:PRK14296 269 E 269
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 1-237 4.74e-46

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 156.69  E-value: 4.74e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDINKEAGSDEK-FKEVKEAYETLSDDQKRAHYDQFGHTDPNQGFAGGGFGGGDFGGFGFDDIFSSIFGG---GTRR 76
Cdd:PRK14285  30 KYHPDKNKGNKEAESiFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGGFEGFSGGFSGFSDIFEDFGDIFDSfftGNRG 109

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  77 RDPNAPR-QGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTNPETCSHCGGSGQlnVEQNTPFGKVVNr 155
Cdd:PRK14285 110 QDKNRKHeKGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKSEKGTSPSICNMCNGSGR--VMQGGGFFRVTT- 186

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774 156 rVCHHCAGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLFVVFHVRAHEFFERDG 235
Cdd:PRK14285 187 -TCPKCYGNGKIISNPCKSCKGKGSLKKKETIELKIPAGIDDNQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNG 265


                 ..
gi 385282774 236 DD 237
Cdd:PRK14285 266 KD 267
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 1-237 5.04e-40

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 141.22  E-value: 5.04e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDINKE--AGSDEKFKEVKEAYETLSDDQKRAHYDQFGHTDPNqGFAGGGFGGGDFGGFGFDDIFSSIFGG------ 72
Cdd:PRK14290  30 KWHPDLHPGnkAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFG-AGGSNFNWDNFTHFSDINDIFNQIFGGnfgsdf 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  73 -GTRRRDPNAPRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTnPETCSHCGGSGQLNVEQNTPFGK 151
Cdd:PRK14290 109 fSGFGNQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGTGAKNGK-LITCPTCHGTGQQRIVRGQGFFR 187

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774 152 VVNRRVCHHCAGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPgiNGGPAGDLFVVFHVRAHEFF 231
Cdd:PRK14290 188 MVTVTTCRTCGGRGRIPEEKCPRCNGTGTVVVNEDISVKIPKGATDNLRLRVKGKGQS--YGGRTGDLYVVLRVNNDPNI 265


                 ....*.
gi 385282774 232 ERDGDD 237
Cdd:PRK14290 266 QRINDD 271
PRK10266 PRK10266
curved DNA-binding protein;
1-237 4.14e-36

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 129.56  E-value: 4.14e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDINKEAGSDEKFKEVKEAYETLSDDQKRAHYDQF--GHTDPNQGFAGGGFGGGDFGGFGFDDIFSSIFG--GGTRR 76
Cdd:PRK10266  31 KYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLwqHRNDPQFNRQFQHGDGQSFNAEDFDDIFSSIFGqhARQSR 110

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  77 RDPnaPRQGADLQytmtlsFEDAAFGKETTIEIPReetcetckgsgakpgtnpetcshcggsgqlNVEQNTP----FGKV 152
Cdd:PRK10266 111 QRP--AARGHDIE------IEVAVFLEETLTEHKR------------------------------TISYNLPvynaFGMI 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774 153 vnrrvchhcagTGKIIKNkcadcggkgkikkrkkINVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLFVVFHVRAHEFFE 232
Cdd:PRK10266 153 -----------EQEIPKT----------------LNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFD 205


                 ....*
gi 385282774 233 RDGDD 237
Cdd:PRK10266 206 IVGQD 210
PRK14288 PRK14288
molecular chaperone DnaJ;
1-237 9.08e-32

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 119.41  E-value: 9.08e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDINK-EAGSDEKFKEVKEAYETLSDDQKRAHYDQFGHTDPNQGFAGGGFGGGDFGGFGFddIFSSIFGGGTRRRDP 79
Cdd:PRK14288  30 KYHPDRNAgDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGASQSDFSDFFEDLGS--FFEDAFGFGARGSKR 107

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  80 NAPRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAKPGTnPETCSHCGGSGQLNVEQntpfGKVVNRRVCH 159
Cdd:PRK14288 108 QKSSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKDKA-LETCKQCNGQGQVFMRQ----GFMSFAQTCG 182

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 385282774 160 HCAGTGKIIKNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPgINGGPAGDLFVVFHVRAHEFFERDGDD 237
Cdd:PRK14288 183 ACQGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKGNE-YEKGKRGDLYLEARVKEDEHFKREGCD 259
DnaJ_C cd10747
C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 ...
 86-237 1.87e-30

C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70.


Pssm-ID: 199909 [Multi-domain]  Cd Length: 158  Bit Score: 110.59  E-value: 1.87e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  86 ADLQYTMTLSFEDAAFGKETTIEIPREETcetckgsgakpgtnpetcshcggsgqlnveqntpfgkVVNRRvchhcagtg 165
Cdd:cd10747    1 ADLRYDLELTLEEAYFGKEKEIKIPRKVT-------------------------------------RVREK--------- 34

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 385282774 166 KIIKnkcadcggkgkikkrkkinVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLFVVFHVRAHEFFERDGDD 237
Cdd:cd10747   35 KTLT-------------------VKIPAGVDDGQRLRLRGEGDAGPNGGPPGDLYVVIRVKPHPVFRRDGND 87
DnaJ_CXXCXGXG pfam00684
DnaJ central domain; The central cysteine-rich (CR) domain of DnaJ proteins contains four ...
 115-175 6.07e-24

DnaJ central domain; The central cysteine-rich (CR) domain of DnaJ proteins contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DNAJ cysteine rich domain and various hydrophobic peptides has been found.


Pssm-ID: 459904 [Multi-domain]  Cd Length: 65  Bit Score: 90.70  E-value: 6.07e-24
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 385282774  115 CETCKGSGAKPGTNPETCSHCGGSGQLNVEQNTPFGKVVNRRVCHHCAGTGKIIKNKCADC 175
Cdd:pfam00684   1 CPTCNGSGAKPGTKPTTCPTCGGTGQVRRVQQTGPGFFQMQSTCPTCGGTGKIIKDPCKKC 61
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 1-237 7.62e-24

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 98.35  E-value: 7.62e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDinkEAGSDEKFKEVKEAYETLSDDQKRAHYDQFG---------HTDPNQgfagggfgggdfggfgfddIFSSIFG 71
Cdd:PTZ00037  55 KHHPD---KGGDPEKFKEISRAYEVLSDPEKRKIYDEYGeegleggeqPADASD-------------------LFDLIFG 112

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  72 GGtrrRDPNAPRQGADLQYTMTLSFEDAAFGKETTIEIPREETCETCKGSGAkPGTNPETCSHCGGSG-QLNVEQntpFG 150
Cdd:PTZ00037 113 GG---RKPGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGG-PKDAFVDCKLCNGQGiRVQIRQ---MG 185

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774 151 KVVNRR--VCHHCAGTGKII--KNKCADCGGKGKIKKRKKINVTIPAGVDDGQQLRLSGQGEPGINGGPaGDLFVVFHVR 226
Cdd:PTZ00037 186 SMIHQTqsTCNSCNGQGKIIpeSKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFHGEADEKPNEIP-GNVVFILNEK 264

                        250
                 ....*....|.
gi 385282774 227 AHEFFERDGDD 237
Cdd:PTZ00037 265 PHDTFKREGGD 275
DnaJ_zf cd10719
Zinc finger domain of DnaJ and HSP40; Central/middle or CxxCxGxG-motif containing domain of ...
 115-175 1.50e-22

Zinc finger domain of DnaJ and HSP40; Central/middle or CxxCxGxG-motif containing domain of DnaJ/Hsp40 (heat shock protein 40). DnaJ proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonin family. Hsp40 proteins are characterized by the presence of an N-terminal J domain, which mediates the interaction with Hsp70. This central domain contains four repeats of a CxxCxGxG motif and binds to two Zinc ions. It has been implicated in substrate binding.


Pssm-ID: 199908 [Multi-domain]  Cd Length: 65  Bit Score: 86.93  E-value: 1.50e-22
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 385282774 115 CETCKGSGAKPGTNPETCSHCGGSGQLNVEQNTPFGKVVNRRVCHHCAGTGKIIKNKCADC 175
Cdd:cd10719    1 CPTCNGSGAKPGTKPKTCPTCGGSGQVRQVQGTGFGFFQTQTTCPTCGGTGKIIKDPCPKC 61
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 1-237 5.54e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 80.75  E-value: 5.54e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDINKEAGSDEKFKEVKEAYETLSDDQKRAHYDQFGHTDPNQGFAGGGFGGGDFGGFGFDDI------FSSIFGG-- 72
Cdd:PRK14299  31 KYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPPPGPPGGGDFSGFNVgdfsdfFQQLFGGrg 110

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  73 -----GTRRRDP-NAPRQGADLQYTMTLSFEDAAFGKETTIEIpreetcetckgsgakpgtnpetcshcGGsgqlnveqn 146
Cdd:PRK14299 111 gfggfGDLFGSVgRRARKGRDLEAELPLTLEEAYRGGEKVVEV--------------------------AG--------- 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774 147 tpfgkvvnRRVchhcagtgkiiknkcadcggkgkikkrkkiNVTIPAGVDDGQQLRLSGQGEPGinggpaGDLFVVFHVR 226
Cdd:PRK14299 156 --------ERL------------------------------SVRIPPGVREGQVIRLAGKGRQG------GDLYLVVRLL 191

                        250
                 ....*....|.
gi 385282774 227 AHEFFERDGDD 237
Cdd:PRK14299 192 PHPVFRLEGDD 202
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 1-40 1.89e-17

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 75.89  E-value: 1.89e-17
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 385282774   1 KYHPDINK-EAGSDEKFKEVKEAYETLSDDQKRAHYDQFGH 40
Cdd:COG0484   27 KYHPDRNPgDPEAEEKFKEINEAYEVLSDPEKRAAYDRFGH 67
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 1-36 7.34e-16

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 69.42  E-value: 7.34e-16
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 385282774    1 KYHPDIN-KEAGSDEKFKEVKEAYETLSDDQKRAHYD 36
Cdd:pfam00226  27 KYHPDKNpGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
1-40 8.66e-15

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 72.93  E-value: 8.66e-15
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 385282774   1 KYHPDINKEAGSDEKFKEVKEAYETLSDDQKRAHYDQFGH 40
Cdd:NF037946  32 KYHPDRNKAPDAAEIFAEINEAYEVLSNPEKRANYDKYGH 71
DnaJ smart00271
DnaJ molecular chaperone homology domain;
1-31 7.71e-09

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 50.70  E-value: 7.71e-09
                           10        20        30
                   ....*....|....*....|....*....|...
gi 385282774     1 KYHPDINK--EAGSDEKFKEVKEAYETLSDDQK 31
Cdd:smart00271  28 KYHPDKNPgdKEEAEEKFKEINEAYEVLSDPEK 60
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 1-28 5.58e-08

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 47.93  E-value: 5.58e-08
                         10        20
                 ....*....|....*....|....*....
gi 385282774   1 KYHPDINK-EAGSDEKFKEVKEAYETLSD 28
Cdd:cd06257   27 KYHPDKNPdDPEAEEKFKEINEAYEVLSD 55
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
1-45 9.76e-08

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 48.56  E-value: 9.76e-08
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 385282774   1 KYHPDINKE--AGSDEKFKEVKEAYETLSDDQKRAHYD----QFGHTDPNQ 45
Cdd:COG2214   32 LLHPDRGGElkALAEELFQRLNEAYEVLSDPERRAEYDrelgQSGKGSASQ 82
DnaJ_C cd10747
C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 ...
 83-225 2.86e-06

C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70.


Pssm-ID: 199909 [Multi-domain]  Cd Length: 158  Bit Score: 45.88  E-value: 2.86e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385282774  83 RQGADLQYTMTLSFEDAAFGkeTTIEIPreetcetckgsgakpgtnpetcshcggsgqlnveqnTPFGKVvnrrvchhca 162
Cdd:cd10747   83 RDGNDLYCEVPISLTEALLG--GEIEVP------------------------------------TLGGKV---------- 114

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 385282774 163 gtgkiiknkcadcggkgkikkrkkiNVTIPAGVDDGQQLRLSGQGEPGINGGPAGDLFVVFHV 225
Cdd:cd10747  115 -------------------------KLKIPPGTQPGTVLRLKGKGMPRLRGGGRGDLYVEVKV 152
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 1-36 8.71e-06

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 45.79  E-value: 8.71e-06
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 385282774   1 KYHPDINKEAGS---DEKFKEVKEAYETLSDDQKRAHYD 36
Cdd:COG5269   73 KYHPDKTAAGGNkgcDEFFKLIQKAREVLGDRKLRLQYD 111
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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