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Conserved domains on  [gi|399765023|gb|AFP50702|]
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ATP synthase subunit 8, partial (mitochondrion) [Mugil liza]

Protein Classification

ATP synthase F0 subunit 8( domain architecture ID 10009578)

ATP synthase F0 subunit 8 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP8 MTH00133
ATP synthase F0 subunit 8; Provisional
 1-39 8.06e-17

ATP synthase F0 subunit 8; Provisional


:

Pssm-ID: 177191  Cd Length: 55  Bit Score: 65.28  E-value: 8.06e-17
                        10        20        30
                ....*....|....*....|....*....|....*....
gi 399765023  1 WLIFLTIIPPKILSHTSPNEPAHQNAEKPKTEVWTWPWY 39
Cdd:MTH00133 17 WLVFLTIIPPKVLAHTFPNEPTPQSTEKPKTEPWNWPWH 55
 
Name Accession Description Interval E-value
ATP8 MTH00133
ATP synthase F0 subunit 8; Provisional
 1-39 8.06e-17

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177191  Cd Length: 55  Bit Score: 65.28  E-value: 8.06e-17
                        10        20        30
                ....*....|....*....|....*....|....*....
gi 399765023  1 WLIFLTIIPPKILSHTSPNEPAHQNAEKPKTEVWTWPWY 39
Cdd:MTH00133 17 WLVFLTIIPPKVLAHTFPNEPTPQSTEKPKTEPWNWPWH 55
 
Name Accession Description Interval E-value
ATP8 MTH00133
ATP synthase F0 subunit 8; Provisional
 1-39 8.06e-17

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177191  Cd Length: 55  Bit Score: 65.28  E-value: 8.06e-17
                        10        20        30
                ....*....|....*....|....*....|....*....
gi 399765023  1 WLIFLTIIPPKILSHTSPNEPAHQNAEKPKTEVWTWPWY 39
Cdd:MTH00133 17 WLVFLTIIPPKVLAHTFPNEPTPQSTEKPKTEPWNWPWH 55
ATP8 MTH00171
ATP synthase F0 subunit 8; Provisional
 1-38 6.28e-08

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177225  Cd Length: 54  Bit Score: 42.73  E-value: 6.28e-08
                        10        20        30
                ....*....|....*....|....*....|....*...
gi 399765023  1 WLIFLTIIPPKILSHTSPNEPAHQNAEKPKTEVWTWPW 38
Cdd:MTH00171 17 WLIFLTLLPNKITKHIFTNKPSPNQTEKPKPNEWNWPW 54
ATP8 MTH00072
ATP synthase F0 subunit 8; Provisional
 1-38 2.64e-07

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 164642  Cd Length: 54  Bit Score: 41.11  E-value: 2.64e-07
                        10        20        30
                ....*....|....*....|....*....|....*...
gi 399765023  1 WLIFLTIIPPKILSHTSPNEPAHQNaEKPKTEVWTWPW 38
Cdd:MTH00072 17 WLIFLLILPFKISNHKNLNEPTSQN-KKNKPESWNWPW 53
ATP8 MTH00123
ATP synthase F0 subunit 8; Provisional
 1-39 7.68e-04

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 214426  Cd Length: 54  Bit Score: 32.16  E-value: 7.68e-04
                        10        20        30
                ....*....|....*....|....*....|....*....
gi 399765023  1 WLIFLTIIPPKILSHTSPNEPAHQNaEKPKTEVWTWPWY 39
Cdd:MTH00123 17 WLTLILIIQPKILSFTPTNNPTKTN-TTTNTTPWTWPWT 54
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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