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Conserved domains on  [gi|402914320|gb|AFR11689|]
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cell division protein FtsZ, partial [Frankia sp. Ea48.1]

Protein Classification

cell division protein FtsZ( domain architecture ID 11415192)

cell division protein FtsZ assembles into a Z ring that provides the framework for the cell division apparatus

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
FtsZ COG0206
Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning];
2-239 2.20e-134

Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning];


:

Pssm-ID: 439976 [Multi-domain]  Cd Length: 347  Bit Score: 381.77  E-value: 2.20e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320   2 GLKGVEFIAINTDAQALLMSDADVKLDVGRELTRGLGAGADPEVGRQAAEDHREEIEEVLKGADMVFV------------ 69
Cdd:COG0206   34 GLEGVEFIAANTDAQALENSKAPTKIQLGEKLTRGLGAGANPEVGRKAAEESREEIREALEGADMVFItagmgggtgtga 113
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320  70 TagegggtgtggaPVVANVARSLGALTIGVVTRPFTFEGRRRATQADTGIDTLRNEVDTLIVIPNDRLLAMTDRDISVLD 149
Cdd:COG0206  114 A------------PVIAEIAKELGALTVGVVTKPFSFEGKRRMRQAEEGIEELRKYVDTLIVIPNDKLLEVADKNTPLLE 181
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320 150 AFRSADQVLLSGVQGITDLITTPGLINLDFADVKTVMSHAGSALMGIGRARGDDRATVAAEQAIASPLLE-ASMDGAQGV 228
Cdd:COG0206  182 AFKKADDVLRQAVQGITDLITKPGLINLDFADVKTVMSNGGVALMGIGEASGENRAEEAAEKAISSPLLEdVSISGAKGV 261
                        250
                 ....*....|.
gi 402914320 229 LLNISGGSDLG 239
Cdd:COG0206  262 LVNITGGSDLT 272
 
Name Accession Description Interval E-value
FtsZ COG0206
Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning];
2-239 2.20e-134

Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 439976 [Multi-domain]  Cd Length: 347  Bit Score: 381.77  E-value: 2.20e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320   2 GLKGVEFIAINTDAQALLMSDADVKLDVGRELTRGLGAGADPEVGRQAAEDHREEIEEVLKGADMVFV------------ 69
Cdd:COG0206   34 GLEGVEFIAANTDAQALENSKAPTKIQLGEKLTRGLGAGANPEVGRKAAEESREEIREALEGADMVFItagmgggtgtga 113
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320  70 TagegggtgtggaPVVANVARSLGALTIGVVTRPFTFEGRRRATQADTGIDTLRNEVDTLIVIPNDRLLAMTDRDISVLD 149
Cdd:COG0206  114 A------------PVIAEIAKELGALTVGVVTKPFSFEGKRRMRQAEEGIEELRKYVDTLIVIPNDKLLEVADKNTPLLE 181
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320 150 AFRSADQVLLSGVQGITDLITTPGLINLDFADVKTVMSHAGSALMGIGRARGDDRATVAAEQAIASPLLE-ASMDGAQGV 228
Cdd:COG0206  182 AFKKADDVLRQAVQGITDLITKPGLINLDFADVKTVMSNGGVALMGIGEASGENRAEEAAEKAISSPLLEdVSISGAKGV 261
                        250
                 ....*....|.
gi 402914320 229 LLNISGGSDLG 239
Cdd:COG0206  262 LVNITGGSDLT 272
FtsZ_type1 cd02201
Filamenting temperature sensitive mutant Z, type 1; FtsZ is a GTPase that is similar to the ...
2-238 8.46e-122

Filamenting temperature sensitive mutant Z, type 1; FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.


Pssm-ID: 276961 [Multi-domain]  Cd Length: 303  Bit Score: 348.23  E-value: 8.46e-122
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320   2 GLKGVEFIAINTDAQALLMSDADVKLDVGRELTRGLGAGADPEVGRQAAEDHREEIEEVLKGADMVFVTAGEGGGTGTGG 81
Cdd:cd02201   23 GLEGVEFIAINTDAQALEKSKAPNKIQIGEKLTRGLGAGGDPEVGRKAAEESREEIKEALKGADMVFITAGMGGGTGTGA 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320  82 APVVANVARSLGALTIGVVTRPFTFEGRRRATQADTGIDTLRNEVDTLIVIPNDRLLAMTDRDISVLDAFRSADQVLLSG 161
Cdd:cd02201  103 APVIAKIAKEMGALTVAVVTLPFSFEGKKRMRNAEEGLEELKKYVDTLIVIPNDKLLEIVGKNLPLLEAFKKADEVLAQA 182
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 402914320 162 VQGITDLITTPGLINLDFADVKTVMSHAGSALMGIGRARGDDRATVAAEQAIASPLLEASMDGAQGVLLNISGGSDL 238
Cdd:cd02201  183 VKGITDLITKPGLINLDFADVKTVMKNGGLALMGIGEASGENRAEEAVEKALNSPLLEDDIKGAKGVLVNITGGPDL 259
PRK13018 PRK13018
cell division protein FtsZ; Provisional
2-238 6.05e-102

cell division protein FtsZ; Provisional


Pssm-ID: 237273 [Multi-domain]  Cd Length: 378  Bit Score: 300.77  E-value: 6.05e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320   2 GLKGVEFIAINTDAQALLMSDADVKLDVGRELTRGLGAGADPEVGRQAAEDHREEIEEVLKGADMVFVTAGEGGGTGTGG 81
Cdd:PRK13018  51 GIEGAETIAINTDAQHLAMIKADKKILIGKSLTRGLGAGGDPEVGRKAAEESRDEIKEVLKGADLVFVTAGMGGGTGTGA 130
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320  82 APVVANVARSLGALTIGVVTRPFTFEGRRRATQADTGIDTLRNEVDTLIVIPNDRLLAMTdRDISVLDAFRSADQVLLSG 161
Cdd:PRK13018 131 APVVAEIAKEQGALVVGVVTKPFKFEGRARMQKAEEGIERLREAADTVIVIDNNRLLDIV-PNLPIADAFSVADEVIAET 209
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 402914320 162 VQGITDLITTPGLINLDFADVKTVMSHAGSALMGIGRARGDDRATVAAEQAIASPLLEASMDGAQGVLLNISGGSDL 238
Cdd:PRK13018 210 VKGITETITKPSLINLDFADVKSVMKGGGVAMMGVGEAKGQNRAMEAVRAALANPLLDVDYRGAKGALVHITGGPDL 286
ftsZ TIGR00065
cell division protein FtsZ; This family consists of cell division protein FtsZ, a GTPase found ...
2-238 2.11e-94

cell division protein FtsZ; This family consists of cell division protein FtsZ, a GTPase found in bacteria, the chloroplast of plants, and in archaebacteria. Structurally similar to tubulin, FtsZ undergoes GTP-dependent polymerization into filaments that form a cytoskeleton involved in septum synthesis. [Cellular processes, Cell division]


Pssm-ID: 272884 [Multi-domain]  Cd Length: 349  Bit Score: 280.35  E-value: 2.11e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320    2 GLKGVEFIAINTDAQALLMSDADVKLDVGRELTRGLGAGADPEVGRQAAEDHREEIEEVLKGADMVFVTAGEGGGTGTGG 81
Cdd:TIGR00065  40 GVEGVEFIAINTDAQHLKTTKADKKILIGKKLTRGLGAGGNPEIGRKAAEESRDEIRKLLEGADMVFITAGMGGGTGTGA 119
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320   82 APVVANVARSLGALTIGVVTRPFTFEGRRRATQADTGIDTLRNEVDTLIVIPNDRLLAMTDRdISVLDAFRSADQVLLSG 161
Cdd:TIGR00065 120 APVVAKIAKELGALTVAVVTKPFKFEGLKRRKKAEEGLERLKQAVDTLIVIPNDKLLEVVPN-LPLNDAFKVADDVLVRA 198
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320  162 VQGITDLITTPGLINLDFADVKTVMSHAGSALMGIGRARGDDRATVAAE---QAIASPLLE-ASMDGAQGVLLNISGGSD 237
Cdd:TIGR00065 199 VKGISELITKPGLINIDFADVRAVMSGGGVAMMGIGEALGEDTANRAFEavrKALSSPLLDvDKISGAKGALVHITGGAD 278

                  .
gi 402914320  238 L 238
Cdd:TIGR00065 279 L 279
Tubulin smart00864
Tubulin/FtsZ family, GTPase domain; This domain is found in all tubulin chains, as well as the ...
4-173 9.75e-63

Tubulin/FtsZ family, GTPase domain; This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.


Pssm-ID: 214867 [Multi-domain]  Cd Length: 192  Bit Score: 194.24  E-value: 9.75e-63
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320     4 KGVEFIAINTDAQALLM-SDADVKLDVGRELTRGLGAGADPEVGRQAAEDHREEIEEVLKGADMVFVTAGEGGGTGTGGA 82
Cdd:smart00864  22 GVIDGVRANTDAQALNPeSLASGKIQAGNNWTRGLGAGADPEVGREAAEESLDEIREELEGADGVFITAGMGGGTGTGAA 101
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320    83 PVVANVARSLGALTIGVVTRPFTFEGRRRATQADTGIDTLRNEVDTLIVIPNDRLLAMTDRDISVLDAFRSADQVLLSGV 162
Cdd:smart00864 102 PVIAEIAKEYGILTVAVVTKPFSFEGVVRPYNAELGLEELREHVDSLIVIDNDALLDICGRKLPLRPAFKDANDLLAQAV 181
                          170
                   ....*....|.
gi 402914320   163 QGITDLITTPG 173
Cdd:smart00864 182 SGITDLIRFPG 192
Tubulin pfam00091
Tubulin/FtsZ family, GTPase domain; This family includes the tubulin alpha, beta and gamma ...
9-142 1.09e-26

Tubulin/FtsZ family, GTPase domain; This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules.


Pssm-ID: 459669 [Multi-domain]  Cd Length: 190  Bit Score: 101.53  E-value: 1.09e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320    9 IAINTDAQALLMSDADVKLD---VGRELTRGLGAGADPEVGRQAAEDHREEIEEVLKGADM---VFVTAGEGGGTGTGGA 82
Cdd:pfam00091  48 LAIDTDPQALNEIKAGFNPNkilLGKEGTGGNGAGGYPEIGREAAEESLEEIRKEVEGCDMlqgFFITASLGGGTGSGAA 127
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 402914320   83 PVVANVARSL--GALTIGVVTRPFTF-EGRRRATQADTGIDTLRNEVDTLIVIPNDRLLAMTD 142
Cdd:pfam00091 128 PVIAEILKELypGALTVAVVTFPFGFsEGVVRPYNAILGLKELIEHSDSVIVIDNDALYDICD 190
 
Name Accession Description Interval E-value
FtsZ COG0206
Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning];
2-239 2.20e-134

Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 439976 [Multi-domain]  Cd Length: 347  Bit Score: 381.77  E-value: 2.20e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320   2 GLKGVEFIAINTDAQALLMSDADVKLDVGRELTRGLGAGADPEVGRQAAEDHREEIEEVLKGADMVFV------------ 69
Cdd:COG0206   34 GLEGVEFIAANTDAQALENSKAPTKIQLGEKLTRGLGAGANPEVGRKAAEESREEIREALEGADMVFItagmgggtgtga 113
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320  70 TagegggtgtggaPVVANVARSLGALTIGVVTRPFTFEGRRRATQADTGIDTLRNEVDTLIVIPNDRLLAMTDRDISVLD 149
Cdd:COG0206  114 A------------PVIAEIAKELGALTVGVVTKPFSFEGKRRMRQAEEGIEELRKYVDTLIVIPNDKLLEVADKNTPLLE 181
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320 150 AFRSADQVLLSGVQGITDLITTPGLINLDFADVKTVMSHAGSALMGIGRARGDDRATVAAEQAIASPLLE-ASMDGAQGV 228
Cdd:COG0206  182 AFKKADDVLRQAVQGITDLITKPGLINLDFADVKTVMSNGGVALMGIGEASGENRAEEAAEKAISSPLLEdVSISGAKGV 261
                        250
                 ....*....|.
gi 402914320 229 LLNISGGSDLG 239
Cdd:COG0206  262 LVNITGGSDLT 272
FtsZ_type1 cd02201
Filamenting temperature sensitive mutant Z, type 1; FtsZ is a GTPase that is similar to the ...
2-238 8.46e-122

Filamenting temperature sensitive mutant Z, type 1; FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.


Pssm-ID: 276961 [Multi-domain]  Cd Length: 303  Bit Score: 348.23  E-value: 8.46e-122
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320   2 GLKGVEFIAINTDAQALLMSDADVKLDVGRELTRGLGAGADPEVGRQAAEDHREEIEEVLKGADMVFVTAGEGGGTGTGG 81
Cdd:cd02201   23 GLEGVEFIAINTDAQALEKSKAPNKIQIGEKLTRGLGAGGDPEVGRKAAEESREEIKEALKGADMVFITAGMGGGTGTGA 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320  82 APVVANVARSLGALTIGVVTRPFTFEGRRRATQADTGIDTLRNEVDTLIVIPNDRLLAMTDRDISVLDAFRSADQVLLSG 161
Cdd:cd02201  103 APVIAKIAKEMGALTVAVVTLPFSFEGKKRMRNAEEGLEELKKYVDTLIVIPNDKLLEIVGKNLPLLEAFKKADEVLAQA 182
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 402914320 162 VQGITDLITTPGLINLDFADVKTVMSHAGSALMGIGRARGDDRATVAAEQAIASPLLEASMDGAQGVLLNISGGSDL 238
Cdd:cd02201  183 VKGITDLITKPGLINLDFADVKTVMKNGGLALMGIGEASGENRAEEAVEKALNSPLLEDDIKGAKGVLVNITGGPDL 259
PRK13018 PRK13018
cell division protein FtsZ; Provisional
2-238 6.05e-102

cell division protein FtsZ; Provisional


Pssm-ID: 237273 [Multi-domain]  Cd Length: 378  Bit Score: 300.77  E-value: 6.05e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320   2 GLKGVEFIAINTDAQALLMSDADVKLDVGRELTRGLGAGADPEVGRQAAEDHREEIEEVLKGADMVFVTAGEGGGTGTGG 81
Cdd:PRK13018  51 GIEGAETIAINTDAQHLAMIKADKKILIGKSLTRGLGAGGDPEVGRKAAEESRDEIKEVLKGADLVFVTAGMGGGTGTGA 130
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320  82 APVVANVARSLGALTIGVVTRPFTFEGRRRATQADTGIDTLRNEVDTLIVIPNDRLLAMTdRDISVLDAFRSADQVLLSG 161
Cdd:PRK13018 131 APVVAEIAKEQGALVVGVVTKPFKFEGRARMQKAEEGIERLREAADTVIVIDNNRLLDIV-PNLPIADAFSVADEVIAET 209
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 402914320 162 VQGITDLITTPGLINLDFADVKTVMSHAGSALMGIGRARGDDRATVAAEQAIASPLLEASMDGAQGVLLNISGGSDL 238
Cdd:PRK13018 210 VKGITETITKPSLINLDFADVKSVMKGGGVAMMGVGEAKGQNRAMEAVRAALANPLLDVDYRGAKGALVHITGGPDL 286
ftsZ TIGR00065
cell division protein FtsZ; This family consists of cell division protein FtsZ, a GTPase found ...
2-238 2.11e-94

cell division protein FtsZ; This family consists of cell division protein FtsZ, a GTPase found in bacteria, the chloroplast of plants, and in archaebacteria. Structurally similar to tubulin, FtsZ undergoes GTP-dependent polymerization into filaments that form a cytoskeleton involved in septum synthesis. [Cellular processes, Cell division]


Pssm-ID: 272884 [Multi-domain]  Cd Length: 349  Bit Score: 280.35  E-value: 2.11e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320    2 GLKGVEFIAINTDAQALLMSDADVKLDVGRELTRGLGAGADPEVGRQAAEDHREEIEEVLKGADMVFVTAGEGGGTGTGG 81
Cdd:TIGR00065  40 GVEGVEFIAINTDAQHLKTTKADKKILIGKKLTRGLGAGGNPEIGRKAAEESRDEIRKLLEGADMVFITAGMGGGTGTGA 119
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320   82 APVVANVARSLGALTIGVVTRPFTFEGRRRATQADTGIDTLRNEVDTLIVIPNDRLLAMTDRdISVLDAFRSADQVLLSG 161
Cdd:TIGR00065 120 APVVAKIAKELGALTVAVVTKPFKFEGLKRRKKAEEGLERLKQAVDTLIVIPNDKLLEVVPN-LPLNDAFKVADDVLVRA 198
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320  162 VQGITDLITTPGLINLDFADVKTVMSHAGSALMGIGRARGDDRATVAAE---QAIASPLLE-ASMDGAQGVLLNISGGSD 237
Cdd:TIGR00065 199 VKGISELITKPGLINIDFADVRAVMSGGGVAMMGIGEALGEDTANRAFEavrKALSSPLLDvDKISGAKGALVHITGGAD 278

                  .
gi 402914320  238 L 238
Cdd:TIGR00065 279 L 279
Tubulin smart00864
Tubulin/FtsZ family, GTPase domain; This domain is found in all tubulin chains, as well as the ...
4-173 9.75e-63

Tubulin/FtsZ family, GTPase domain; This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.


Pssm-ID: 214867 [Multi-domain]  Cd Length: 192  Bit Score: 194.24  E-value: 9.75e-63
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320     4 KGVEFIAINTDAQALLM-SDADVKLDVGRELTRGLGAGADPEVGRQAAEDHREEIEEVLKGADMVFVTAGEGGGTGTGGA 82
Cdd:smart00864  22 GVIDGVRANTDAQALNPeSLASGKIQAGNNWTRGLGAGADPEVGREAAEESLDEIREELEGADGVFITAGMGGGTGTGAA 101
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320    83 PVVANVARSLGALTIGVVTRPFTFEGRRRATQADTGIDTLRNEVDTLIVIPNDRLLAMTDRDISVLDAFRSADQVLLSGV 162
Cdd:smart00864 102 PVIAEIAKEYGILTVAVVTKPFSFEGVVRPYNAELGLEELREHVDSLIVIDNDALLDICGRKLPLRPAFKDANDLLAQAV 181
                          170
                   ....*....|.
gi 402914320   163 QGITDLITTPG 173
Cdd:smart00864 182 SGITDLIRFPG 192
FtsZ_CetZ-like cd02191
Subfamily of FitZ and Cell-structure-related euryarchaeota tubulin/FtsZ homolog-like; FtsZ is ...
5-237 3.33e-56

Subfamily of FitZ and Cell-structure-related euryarchaeota tubulin/FtsZ homolog-like; FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. CetZ-like proteins are related to tubulin and FtsZ and co-exists with FtsZ in many archaea. However, a recent study found that Cetz proteins (formerly annotated FtsZ type 2) are not required for cell division. Instead, CetZ proteins are shown to be involved in controlling archaeal cell shape dynamics. The results from inactivation studies of CetZ proteins in Haloferax volcanii suggest that CetZ1 is essential for normal swimming motility and rod-cell development.


Pssm-ID: 276960 [Multi-domain]  Cd Length: 308  Bit Score: 181.60  E-value: 3.33e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320   5 GVEFIAINTDAQALLMSDADVKLDVGRELTRGLGAGADPEVGRQAAEDHREEIEEVLKG---ADMVFVTAGEGGGTGTGG 81
Cdd:cd02191   31 GVETVAINTAAQDLKSLKAKETLLIGQDRTNGHGVGGNPELGAQAAEEDQEEIMEALEGrveADMIFVTTGLGGGTGSGG 110
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320  82 APVVANVARSLG-ALTIGVVTRPFTFEGRRRATQADTGIDTLRNEVDTLIVIPNDRLLAMTDrdiSVLDAFRSADQVLLS 160
Cdd:cd02191  111 APVLAEALKKVYdVLTVAVVTLPFADEGALYMQNAGEGLRTLAEEADALILVDNEKLRSIGG---SLSEAYDAINEVLAR 187
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 402914320 161 GVQGITDLITTPGLINLDFADVKTVMSHAGSALMGIGRARGD-DRATVAAEQAIASPLLEASMDGAQGVLLNISGGSD 237
Cdd:cd02191  188 RVGGLLEAIEATGLSVVDFADVKTVMNSGGMAMLGYGSADASiNRAREATRRALRTPLLLPDASGADGALVVIAGEPD 265
Tubulin_C smart00865
Tubulin/FtsZ family, C-terminal domain; This domain is found in the tubulin alpha, beta and ...
175-238 4.58e-27

Tubulin/FtsZ family, C-terminal domain; This domain is found in the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. These proteins are GTPases and are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea. This is the C-terminal domain.


Pssm-ID: 214868 [Multi-domain]  Cd Length: 120  Bit Score: 100.70  E-value: 4.58e-27
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 402914320   175 INLDFADVKTVMSHAGSALMGIGRARGDDRATVAAEQAIASPLLEA-SMDGAQGVLLNISGGSDL 238
Cdd:smart00865   1 INVDFADVKTVMVPMGFAMMGIGPASGENRALEAAELAISSPLLEDsNIMGAKGVLVNITGGPDL 65
Tubulin pfam00091
Tubulin/FtsZ family, GTPase domain; This family includes the tubulin alpha, beta and gamma ...
9-142 1.09e-26

Tubulin/FtsZ family, GTPase domain; This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules.


Pssm-ID: 459669 [Multi-domain]  Cd Length: 190  Bit Score: 101.53  E-value: 1.09e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320    9 IAINTDAQALLMSDADVKLD---VGRELTRGLGAGADPEVGRQAAEDHREEIEEVLKGADM---VFVTAGEGGGTGTGGA 82
Cdd:pfam00091  48 LAIDTDPQALNEIKAGFNPNkilLGKEGTGGNGAGGYPEIGREAAEESLEEIRKEVEGCDMlqgFFITASLGGGTGSGAA 127
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 402914320   83 PVVANVARSL--GALTIGVVTRPFTF-EGRRRATQADTGIDTLRNEVDTLIVIPNDRLLAMTD 142
Cdd:pfam00091 128 PVIAEILKELypGALTVAVVTFPFGFsEGVVRPYNAILGLKELIEHSDSVIVIDNDALYDICD 190
FtsZ_C pfam12327
FtsZ family, C-terminal domain; This family includes the bacterial FtsZ family of proteins. ...
190-239 1.52e-17

FtsZ family, C-terminal domain; This family includes the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ is a GTPase, like tubulin. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea.


Pssm-ID: 463534 [Multi-domain]  Cd Length: 95  Bit Score: 74.93  E-value: 1.52e-17
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 402914320  190 GSALMGIGRARGDDRATVAAEQAIASPLLEASMDGAQGVLLNISGGSDLG 239
Cdd:pfam12327   1 GVAMMGTGEASGENRAEEAAEAAISSPLLDVDLSGARGVLVNITGGPDLT 50
CetZ_tubulin-like cd02202
Cell-structure-related euryarchaeota tubulin/FtsZ homologs; CetZ proteins comprise a distinct ...
6-202 2.40e-09

Cell-structure-related euryarchaeota tubulin/FtsZ homologs; CetZ proteins comprise a distinct tubulin/FtsZ family. The crystal structures of CetZ contain the FtsZ/tubulin superfamily fold and its family members have mosaic of tubulin-like and FtsZ-like amino acid residues. However, a recent study found that CetZ proteins (formerly annotated FtsZ type 2) are not required for cell division, whereas FtsZ proteins play an important role. Instead, CetZ proteins are shown to be involved in controlling archaeal cell shape dynamics. The results from inactivation studies of CetZ proteins in Haloferax volcanii suggest that CetZ1 is essential for normal swimming motility and rod-cell development.


Pssm-ID: 276962 [Multi-domain]  Cd Length: 357  Bit Score: 56.48  E-value: 2.40e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320   6 VEFIAINTDAQALLMSDA---DVKLDVGRELTRGLGAGADPEVGRQAAEDHREEIEEVLKG-----ADMVFVTAGEGGGT 77
Cdd:cd02202   32 VNALAVNTDRADLSGLDHipeERRILIGDTETGGHGVGGDNELGAEVAEEDIDELLRALDTapfseADAFLVVAGLGGGT 111
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320  78 GTGGAPVVANVARSLGALTI-GVVTRPFTFEGRRRATQADTGIDTLRNEVDTLIVIPNDRLLamtDRDISVLDAFRSADQ 156
Cdd:cd02202  112 GSGAAPVLAEELKERYDKPVyALGVLPAAEEGGRYALNAARSLRSLVELADAVILFDNDAWR---RSGESIAEAYDRINE 188
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 402914320 157 VLlsgVQGITDLI--------TTPGLINLDFADVKTVMShaGSALMGIGRARGD 202
Cdd:cd02202  189 EI---AERLGALLaagevdapKSVGESVLDASDIINTLS--GGGVATIGYASED 237
Tubulin_FtsZ_Cetz-like cd00286
Tubulin protein family of FtsZ and CetZ-like; This family includes tubulin alpha-, beta-, ...
9-238 1.00e-06

Tubulin protein family of FtsZ and CetZ-like; This family includes tubulin alpha-, beta-, gamma-, delta-, epsilon, and zeta-tubulins as well as FtsZ and CetZ, all of which are involved in polymer formation. Tubulin is the major component of microtubules, but also exists as a heterodimer and as a curved oligomer. Microtubules exist in all eukaryotic cells and are responsible for many functions, including cellular transport, cell motility, and mitosis. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria, archaea, and chloroplasts. A recent study found that CetZ proteins, formerly annotated FtsZ type 2, are not required for cell division, whereas FtsZ proteins play an important role. Instead, CetZ proteins are shown to be involved in controlling archaeal cell shape dynamics. The results from inactivation studies of CetZ proteins in Haloferax volcanii suggest that CetZ1 is essential for normal swimming motility and rod-cell development.


Pssm-ID: 276954 [Multi-domain]  Cd Length: 332  Bit Score: 48.56  E-value: 1.00e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320   9 IAINTDAQAL--LMSDADVKLDVGRELT---RGLGAGADPEVGRQAAED-HREEIEEVLK-------GADMVFVTAGEGG 75
Cdd:cd00286   23 VLVDLEPAVLdeLLSGPLRQLFHPENIIliqKYHGAGNNWAKGHSVAGEeYQEEILDAIRkeveecdELQGFFITHSLGG 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320  76 GTGTGGAPVVANVARSL--GALTIGVVTRPFTFEGRR-RATQADTGIDTLRNEVDTLIVIPNDRLL-AMTDRDISVLDAF 151
Cdd:cd00286  103 GTGSGLGPLLAERLKDEypNRLVVTFSILPGPDEGVIvYPYNAALTLKTLTEHADCLLLVDNEALYdICPRPLHIDAPAY 182
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 402914320 152 RSADQVLLSGVQGITDLITTPGLINLDF---ADVKTVMSHAGSALMGIGRARGDDRATVAA-------EQAIASPLLEAS 221
Cdd:cd00286  183 DHINELVAQRLGSLTEALRFEGSLNVDLrelAENLVPLPRGHFLMLGYAPLDSATSATPRSlrvkeltRRAFLPANLLVG 262
                        250       260
                 ....*....|....*....|.
gi 402914320 222 MD----GAQGVLLNISGGSDL 238
Cdd:cd00286  263 CDpdhgEAIAALLVIRGPPDL 283
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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