|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
2-243 |
3.32e-138 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 391.84 E-value: 3.32e-138
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 2 QILTGLFLAFHYKTDINLAFQSIINMNRNINFGWLMRSFHANGASMFFIMMYLHISRGIYMNSFNFKMTWMIGVILLLLT 81
Cdd:MTH00156 34 QIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFICIYLHIGRGIYYGSYKLKHTWMSGVIILFLV 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 82 MMTAFVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILMFIFIHLMMLHLT 161
Cdd:MTH00156 114 MATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQT 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 162 GSNNPLGINSNFDKIIFSPYFIIKDLMGLIMFMWMFILLTLMFPYLLNDHNNFIMANPMITPNHIQPEWYFLFSYTILRA 241
Cdd:MTH00156 194 GSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGDPENFIPANPLVTPVHIQPEWYFLFAYAILRS 273
|
..
gi 409688999 242 IP 243
Cdd:MTH00156 274 IP 275
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
2-243 |
3.78e-130 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 372.31 E-value: 3.78e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 2 QILTGLFLAFHYKTDINLAFQSIINMNRNINFGWLMRSFHANGASMFFIMMYLHISRGIYMNSFNFKMTWMIGVILLLLT 81
Cdd:MTH00119 45 QILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLL 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 82 MMTAFVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILMFIFIHLMMLHLT 161
Cdd:MTH00119 125 MATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHET 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 162 GSNNPLGINSNFDKIIFSPYFIIKDLMGLIMFMWMFILLTLMFPYLLNDHNNFIMANPMITPNHIQPEWYFLFSYTILRA 241
Cdd:MTH00119 205 GSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRS 284
|
..
gi 409688999 242 IP 243
Cdd:MTH00119 285 IP 286
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
2-243 |
4.33e-125 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 359.74 E-value: 4.33e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 2 QILTGLFLAFHYKTDINLAFQSIINMNRNINFGWLMRSFHANGASMFFIMMYLHISRGIYMNSFNFKMTWMIGVILLLLT 81
Cdd:MTH00131 44 QILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLV 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 82 MMTAFVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILMFIFIHLMMLHLT 161
Cdd:MTH00131 124 MMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHET 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 162 GSNNPLGINSNFDKIIFSPYFIIKDLMGLIMFMWMFILLTLMFPYLLNDHNNFIMANPMITPNHIQPEWYFLFSYTILRA 241
Cdd:MTH00131 204 GSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRS 283
|
..
gi 409688999 242 IP 243
Cdd:MTH00131 284 IP 285
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
2-243 |
7.35e-125 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 358.83 E-value: 7.35e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 2 QILTGLFLAFHYKTDINLAFQSIINMNRNINFGWLMRSFHANGASMFFIMMYLHISRGIYMNSFNFKMTWMIGVILLLLT 81
Cdd:MTH00145 45 QILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLS 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 82 MMTAFVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILMFIFIHLMMLHLT 161
Cdd:MTH00145 125 MGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHET 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 162 GSNNPLGINSNFDKIIFSPYFIIKDLMGLIMFMWMFILLTLMFPYLLNDHNNFIMANPMITPNHIQPEWYFLFSYTILRA 241
Cdd:MTH00145 205 GSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRS 284
|
..
gi 409688999 242 IP 243
Cdd:MTH00145 285 IP 286
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
2-243 |
1.42e-121 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 349.98 E-value: 1.42e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 2 QILTGLFLAFHYKTDINLAFQSIINMNRNINFGWLMRSFHANGASMFFIMMYLHISRGIYMNSFNFKMTWMIGVILLLLT 81
Cdd:MTH00191 41 QILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILS 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 82 MMTAFVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILMFIFIHLMMLHLT 161
Cdd:MTH00191 121 MATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHET 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 162 GSNNPLGINSNFDKIIFSPYFIIKDLMGLIMFMWMFILLTLMFPYLLNDHNNFIMANPMITPNHIQPEWYFLFSYTILRA 241
Cdd:MTH00191 201 GSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRS 280
|
..
gi 409688999 242 IP 243
Cdd:MTH00191 281 IP 282
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
2-243 |
6.74e-120 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 346.63 E-value: 6.74e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 2 QILTGLFLAFHYKTDINLAFQSIINMNRNINFGWLMRSFHANGASMFFIMMYLHISRGIYMNSFNFKMTWMIGVILLLLT 81
Cdd:MTH00100 44 QILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTV 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 82 MMTAFVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILMFIFIHLMMLHLT 161
Cdd:MTH00100 124 MATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHET 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 162 GSNNPLGINSNFDKIIFSPYFIIKDLMGLIMFMWMFILLTLMFPYLLNDHNNFIMANPMITPNHIQPEWYFLFSYTILRA 241
Cdd:MTH00100 204 GSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRS 283
|
..
gi 409688999 242 IP 243
Cdd:MTH00100 284 IP 285
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
2-243 |
3.56e-118 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 342.05 E-value: 3.56e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 2 QILTGLFLAFHYKTDINLAFQSIINMNRNINFGWLMRSFHANGASMFFIMMYLHISRGIYMNSFNFKMTWMIGVILLLLT 81
Cdd:MTH00074 45 QIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLV 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 82 MMTAFVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILMFIFIHLMMLHLT 161
Cdd:MTH00074 125 MATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHET 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 162 GSNNPLGINSNFDKIIFSPYFIIKDLMGLIMFMWMFILLTLMFPYLLNDHNNFIMANPMITPNHIQPEWYFLFSYTILRA 241
Cdd:MTH00074 205 GSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRS 284
|
..
gi 409688999 242 IP 243
Cdd:MTH00074 285 IP 286
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
2-243 |
1.49e-115 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 335.52 E-value: 1.49e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 2 QILTGLFLAFHYKTDINLAFQSIINMNRNINFGWLMRSFHANGASMFFIMMYLHISRGIYMNSFNFKMTWMIGVILLLLT 81
Cdd:MTH00034 44 QIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLT 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 82 MMTAFVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILMFIFIHLMMLHLT 161
Cdd:MTH00034 124 MLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQT 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 162 GSNNPLGINSNFDKIIFSPYFIIKDLMGLIMFMWMFILLTLMFPYLLNDHNNFIMANPMITPNHIQPEWYFLFSYTILRA 241
Cdd:MTH00034 204 GSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRS 283
|
..
gi 409688999 242 IP 243
Cdd:MTH00034 284 IP 285
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
2-243 |
3.09e-114 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 332.03 E-value: 3.09e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 2 QILTGLFLAFHYKTDINLAFQSIINMNRNINFGWLMRSFHANGASMFFIMMYLHISRGIYMNSFNFKMTWMIGVILLLLT 81
Cdd:MTH00016 45 QILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLT 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 82 MMTAFVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILMFIFIHLMMLHLT 161
Cdd:MTH00016 125 MATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQT 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 162 GSNNPLGINSNFDKIIFSPYFIIKDLMGLIMFMWMFILLTLMFPYLLNDHNNFIMANPMITPNHIQPEWYFLFSYTILRA 241
Cdd:MTH00016 205 GSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRS 284
|
..
gi 409688999 242 IP 243
Cdd:MTH00016 285 IP 286
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
2-243 |
1.02e-100 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 297.77 E-value: 1.02e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 2 QILTGLFLAFHYKTDINLAFQSIINMNRNINFGWLMRSFHANGASMFFIMMYLHISRGIYMNSFNFKMTWMIGVILLLLT 81
Cdd:MTH00022 43 QIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLT 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 82 MMTAFVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILMFIFIHLMMLHLT 161
Cdd:MTH00022 123 MATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVD 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 162 GSNNPLGINSNFDKIIFSPYFIIKDLMGLIMFMWMFILLTLMFPYLLNDHNNFIMANPMITPNHIQPEWYFLFSYTILRA 241
Cdd:MTH00022 203 GSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRS 282
|
..
gi 409688999 242 IP 243
Cdd:MTH00022 283 IP 284
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
2-243 |
4.95e-100 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 295.85 E-value: 4.95e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 2 QILTGLFLAFHYKTDINLAFQSIINMNRNINFGWLMRSFHANGASMFFIMMYLHISRGIYMNSFNFKMTWMIGVILLLLT 81
Cdd:MTH00053 45 QIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLM 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 82 MMTAFVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILMFIFIHLMMLHLT 161
Cdd:MTH00053 125 ILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHED 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 162 GSNNPLGINSNFDKIIFSPYFIIKDLMGLIMFMWMFILLTLMFPYLLNDHNNFIMANPMITPNHIQPEWYFLFSYTILRA 241
Cdd:MTH00053 205 GSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRS 284
|
..
gi 409688999 242 IP 243
Cdd:MTH00053 285 IP 286
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
2-243 |
1.15e-99 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 294.91 E-value: 1.15e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 2 QILTGLFLAFHYKTDINLAFQSIINMNRNINFGWLMRSFHANGASMFFIMMYLHISRGIYMNSFNFKMTWMIGVILLLLT 81
Cdd:MTH00224 45 QVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILT 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 82 MMTAFVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILMFIFIHLMMLHLT 161
Cdd:MTH00224 125 MATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQT 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 162 GSNNPLGINSNFDKIIFSPYFIIKDLMGLIMFMWMFILLTLMFPYLLNDHNNFIMANPMITPNHIQPEWYFLFSYTILRA 241
Cdd:MTH00224 205 GSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRS 284
|
..
gi 409688999 242 IP 243
Cdd:MTH00224 285 IP 286
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-243 |
1.19e-89 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 269.74 E-value: 1.19e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 1 NQILTGLFLAFHYKTDINLAFQSIINMNRNINFGWLMRSFHANGASMFFIMMYLHISRGIYMNSFNF--KMTWMIGVILL 78
Cdd:COG1290 52 IQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAYKKprELNWIIGVLLL 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 79 LLTMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIH-FILPFIILMFIFIHLMM 157
Cdd:COG1290 132 LLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWL 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 158 LHLTGSNNPLGI----NSNFDKIIFSPYFIIKDLMGLIMFMWMFILLTLMFPylLNDHNNFIMANPMITPNHIQPEWYFL 233
Cdd:COG1290 212 LHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFP--INPPPNYGPANPLATPAHIQPDWYFL 289
|
250
....*....|
gi 409688999 234 FSYTILRAIP 243
Cdd:COG1290 290 PFYGILRAIP 299
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
2-243 |
6.26e-87 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 261.80 E-value: 6.26e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 2 QILTGLFLAFHYKTDINLAFQSIINMNRNINFGWLMRSFHANGASMFFIMMYLHISRGIYMNSFNFKMTWMIGVILLLLT 81
Cdd:MTH00086 33 QILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFLYLHIFKGLFMMSYRLKKVWISGLTIYLLV 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 82 MMTAFVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILMFIFIHLMMLHLT 161
Cdd:MTH00086 113 MMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSATLKFFFVLHFLLPWGLLVLVLFHLIFLHST 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 162 GSNNPLGINSNFDKIIFSPYFIIKDLMGLIMFMwMFILLTLMFPYLLNDHNNFIMANPMITPNHIQPEWYFLFSYTILRA 241
Cdd:MTH00086 193 GSTSSLYCHGDYDKICFGPEYWNKDAYNIIFWL-VFIIFSLFYPFNLGDPEMFIEADPMMSPVHIVPEWYFLFAYAILRA 271
|
..
gi 409688999 242 IP 243
Cdd:MTH00086 272 IP 273
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
2-243 |
2.63e-82 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 251.01 E-value: 2.63e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 2 QILTGLFLAFHYKTDINLAFQSIINMNRNINFGWLMRSFHANGASMFFIMMYLHISRGIYMNSFNFKMTWMIGVILLLLT 81
Cdd:MTH00033 41 QILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIM 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 82 MMTAFVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILMFIFIHLMMLHLT 161
Cdd:MTH00033 121 MLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEK 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 162 GSNNPLGINSNFDKIIFSPYFIIKDLMGLIMFMWMFILLTL--MFPYLLNDHNNFIMANPMITPNHIQPEWYFLFSYTIL 239
Cdd:MTH00033 201 GSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIepRIETLLQDPENFIQANPLVTPVHIQPEWYFLFAYAIL 280
|
....
gi 409688999 240 RAIP 243
Cdd:MTH00033 281 RSIP 284
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
2-164 |
1.03e-63 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 197.21 E-value: 1.03e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 2 QILTGLFLAFHYKTDINLAFQSIINMNRNINFGWLMRSFHANGASMFFIMMYLHISRGIYMNSFN--FKMTWMIGVILLL 79
Cdd:cd00284 36 QILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLL 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 80 LTMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILMFIFIHLMMLH 159
Cdd:cd00284 116 LTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLH 195
|
....*
gi 409688999 160 LTGSN 164
Cdd:cd00284 196 EQGSS 200
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
2-242 |
1.55e-63 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 201.75 E-value: 1.55e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 2 QILTGLFLAFHYKTDINLAFQSIINMNRNINFGWLMRSFHANGASMFFIMMYLHISRGIYMNSFNFKMTWMIGVILLLLT 81
Cdd:MTH00046 35 QVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIHMGRALYYSSYSKKGVWNVGFILYLLV 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 82 MMTAFVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILMFIFIHLMMLHLT 161
Cdd:MTH00046 115 MVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKS 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 162 GSNNPLGINSNF-DKIIFSPYFIIKDLMGLIMFMWMFILLTLMFPYLLNDHNNFIMANPMITPNHIQPEWYFLFSYTILR 240
Cdd:MTH00046 195 GSSNPLFSSNGYsDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLR 274
|
..
gi 409688999 241 AI 242
Cdd:MTH00046 275 SI 276
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
2-162 |
2.88e-59 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 185.66 E-value: 2.88e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 2 QILTGLFLAFHYKTDINLAFQSIINMNRNINFGWLMRSFHANGASMFFIMMYLHISRGIYMNSFN--FKMTWMIGVILLL 79
Cdd:pfam00033 27 QILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYYGGFSypRELTWVIGVILLV 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 80 LTMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILMFIFIHLMMLH 159
Cdd:pfam00033 107 LTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRFFSLHFLLPFILAILMLLHLLFLH 186
|
...
gi 409688999 160 LTG 162
Cdd:pfam00033 187 ETG 189
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
2-167 |
4.30e-39 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 134.84 E-value: 4.30e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 2 QILTGLFLAFHYKTDINLAFQSIINMNRNINFGWLMRSFHANGASMFFIMMYLHISRGIYMNSFN--FKMTWMIGVILLL 79
Cdd:PRK03735 55 QILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKkpRELNWVVGVLIFF 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 80 LTMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIH-FILPFIILMFIFIHLMML 158
Cdd:PRK03735 135 VTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWALAVLMLAHFLMI 214
|
....*....
gi 409688999 159 HLTGSNNPL 167
Cdd:PRK03735 215 RKQGISGPL 223
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
46-208 |
4.47e-38 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 130.82 E-value: 4.47e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 46 SMFFIMMYLHISRGIYMNSFNF--KMTWMIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIW 123
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKprELNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 124 GGFSINNATLTRFFSIHF-ILPFIILMFIFIHLMMLHLTGSNNPLGINSNFDKIIFSPYFIIKDLMGLIMFMWMFILLTL 202
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*.
gi 409688999 203 MFPYLL 208
Cdd:pfam13631 161 INPIWL 166
|
|
| petB |
CHL00070 |
cytochrome b6 |
2-167 |
9.77e-36 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 125.99 E-value: 9.77e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 2 QILTGLFLAFHYKTDINLAFQSIINMNRNINFGWLMRSFHANGASMFFIMMYLHISRgIYMNSfNFK----MTWMIGVIL 77
Cdd:CHL00070 47 QVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFR-VYLTG-GFKkpreLTWVTGVVL 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 409688999 78 LLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIH-FILPFIILMFIFIHLM 156
Cdd:CHL00070 125 AVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSLHtFVLPLLTAVFMLMHFL 204
|
170
....*....|.
gi 409688999 157 MLHLTGSNNPL 167
Cdd:CHL00070 205 MIRKQGISGPL 215
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
165-243 |
2.97e-18 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 78.46 E-value: 2.97e-18
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 409688999 165 NPLGINSNFDKIIFSPYFIIKDLMGLIMFMWMFILLTLMFPYLLNDHNNFIMANPMITPNHIQPEWYFLFSYTILRAIP 243
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIP 79
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
216-243 |
5.37e-10 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 54.79 E-value: 5.37e-10
10 20
....*....|....*....|....*...
gi 409688999 216 MANPMITPNHIQPEWYFLFSYTILRAIP 243
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIP 28
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
217-243 |
6.21e-03 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 36.13 E-value: 6.21e-03
10 20
....*....|....*....|....*..
gi 409688999 217 ANPMITPNHIQPEWYFLFSYTILRAIP 243
Cdd:CHL00058 66 ADPFATPLEILPEWYFFPVFQILRTVP 92
|
|
|