|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
4-338 |
3.91e-146 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 415.74 E-value: 3.91e-146
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 4 SLIMSSVATGTIITMTSYHWLLAWIGLELNTLAIIPIIAKQHNPRATEATTKYFLTQAAASATILFASTINAWQTGTWDI 83
Cdd:MTH00135 7 TILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWLTGQWDI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 84 SQLTNQPSCILLTMALAMKLGLTPMHFWLPEVLQGTTLKTALIITTWQKLAPATLLYLVyHSTNPTILLTMGIMSTIVGG 163
Cdd:MTH00135 87 QQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQI-APTNPTLLITLGLTSTLVGG 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 164 WGGLNQTQMRKIMAFSSIANLGWMVTILTINPNIMLLNLALYILMTTPLFLALMFTASKTIKDLTTTWTISPPITAMLLM 243
Cdd:MTH00135 166 WGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPALTALTPL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 244 LLMSMGGLPPLTGFIPKWLILQELTTHNLTATATVMALSALLSLFFYLRLSYTSTLTVFPTTTKNTYKWRFQPKLNTLPM 323
Cdd:MTH00135 246 ILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPSTQLTLPL 325
|
330
....*....|....*
gi 564732281 324 ATTTAISLLLLPMTP 338
Cdd:MTH00135 326 AISTTATLMLLPLTP 340
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
4-338 |
2.90e-143 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 408.44 E-value: 2.90e-143
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 4 SLIMSSVATGTIITMTSYHWLLAWIGLELNTLAIIPIIAKQHNPRATEATTKYFLTQAAASATILFASTINAWQTGTWDI 83
Cdd:MTH00112 7 LIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWNTGQWDI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 84 SQLTNQPSCILLTMALAMKLGLTPMHFWLPEVLQGTTLKTALIITTWQKLAPATLLYLVYHSTNPTILLTMGIMSTIVGG 163
Cdd:MTH00112 87 TQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAILSTLIGG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 164 WGGLNQTQMRKIMAFSSIANLGWMVTILTINPNIMLLNLALYILMTTPLFLALMFTASKTIKDLTTTWTISPPITAMLLM 243
Cdd:MTH00112 167 WGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTLNTTLML 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 244 LLMSMGGLPPLTGFIPKWLILQELTTHNLTATATVMALSALLSLFFYLRLSYTSTLTVFPTTTKNTYKWRFQPKLNTLpM 323
Cdd:MTH00112 247 TLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPKKNTL-T 325
|
330
....*....|....*
gi 564732281 324 ATTTAISLLLLPMTP 338
Cdd:MTH00112 326 ATLTTLSTLLLPLSP 340
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
4-338 |
1.94e-138 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 396.21 E-value: 1.94e-138
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 4 SLIMSSVATGTIITMTSYHWLLAWIGLELNTLAIIPIIAKQHNPRATEATTKYFLTQAAASATILFASTINAWQTGTWDI 83
Cdd:MTH00070 7 SILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWFTGEWTI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 84 SQLTNQPSCILLTMALAMKLGLTPMHFWLPEVLQGTTLKTALIITTWQKLAPATLLYLVYHSTNPTILLTMGIMSTIVGG 163
Cdd:MTH00070 87 MNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLLSTLIGG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 164 WGGLNQTQMRKIMAFSSIANLGWMVTILTINPNIMLLNLALYILMTTPLFLALMFTASKTIKDLTTTWTISPPITAMLLM 243
Cdd:MTH00070 167 WGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTLTSMMML 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 244 LLMSMGGLPPLTGFIPKWLILQELTTHNLTATATVMALSALLSLFFYLRLSYTSTLTVFPTTTKNTYKWRFQPKLNtLPM 323
Cdd:MTH00070 247 TLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNKTN-NLL 325
|
330
....*....|....*
gi 564732281 324 ATTTAISLLLLPMTP 338
Cdd:MTH00070 326 SLTIILSLMLLPITP 340
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
4-338 |
2.39e-131 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 378.42 E-value: 2.39e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 4 SLIMSSVATGTIITMTSYHWLLAWIGLELNTLAIIPIIAKQHNPRATEATTKYFLTQAAASATILFASTINAWQTGTWDI 83
Cdd:MTH00105 7 IIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMYSGQWTI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 84 SQLTNQPSCILLTMALAMKLGLTPMHFWLPEVLQGTTLKTALIITTWQKLAPATLLYLVYHSTNPTILLTMGIMSTIVGG 163
Cdd:MTH00105 87 TKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAILSILIGG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 164 WGGLNQTQMRKIMAFSSIANLGWMVTILTINPNIMLLNLALYILMTTPLFLALMFTASKTIKDLTTTWTISPPITAMLLM 243
Cdd:MTH00105 167 WGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLMTSLILL 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 244 LLMSMGGLPPLTGFIPKWLILQELTTHNLTATATVMALSALLSLFFYLRLSYTSTLTVFPTTTKNTYKWRFQPKLNTLPM 323
Cdd:MTH00105 247 TLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENTKPMTLL 326
|
330
....*....|....*
gi 564732281 324 ATTTAISLLLLPMTP 338
Cdd:MTH00105 327 PTLIILSTMLLPLTP 341
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-338 |
2.04e-100 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 299.58 E-value: 2.04e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 1 VMYSLIMSSVATGTIITMTSYHWLLAWIGLELNTLAIIPIIAKQHNPRATEATTKYFLTQAAASATILFASTINAWQTGT 80
Cdd:MTH00200 4 LILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSGQ 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 81 WDISQLTNQPSCILLTMALAMKLGLTPMHFWLPEVLQGTTLKTALIITTWQKLAPATLLYLVYHSTNPTILLTMGIMSTI 160
Cdd:MTH00200 84 WGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLLSVL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 161 VGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINPNIMLLNLALYILMTTPLFLALMFTASKTIKDLTTTWTISPPITAM 240
Cdd:MTH00200 164 VGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPILSML 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 241 LLMLLMSMGGLPPLTGFIPKWLILQELTTHNLTATATVMALSALLSLFFYLRLSYTSTLTVFPTTTKNTYKWRFQPKLNt 320
Cdd:MTH00200 244 LGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSNSN- 322
|
330
....*....|....*...
gi 564732281 321 LPMATTTAISLLLLPMTP 338
Cdd:MTH00200 323 LLVGLLLLLSILGLPLTP 340
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
3-334 |
2.15e-94 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 284.52 E-value: 2.15e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 3 YSLIMSSVATGTIITMTSYHWLLAWIGLELNTLAIIPIIAKQHNPRATEATTKYFLTQAAASATILFASTINAWQTGTWD 82
Cdd:MTH00041 6 LIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWS 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 83 ISQLTNQPSCILLTMALAMKLGLTPMHFWLPEVLQGTTLKTALIITTWQKLAPATLLYLVYHSTNPTILLTMGIMSTIVG 162
Cdd:MTH00041 86 INGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVG 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 163 GWGGLNQTQMRKIMAFSSIANLGWMVTILTINPNIMLLNLALYILMTTPLFLALMFTASKTIKDLTTTWTISPPITAMLL 242
Cdd:MTH00041 166 GWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFI 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 243 MLLMSMGGLPPLTGFIPKWLILQELTTHNLTATATVMALSALLSLFFYLRLSYTSTLTVFPTTTKNTYKWRFQPKLNTLP 322
Cdd:MTH00041 246 LSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNITVYG 325
|
330
....*....|..
gi 564732281 323 MATTTAISLLLL 334
Cdd:MTH00041 326 VILSILSSISIL 337
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
2-338 |
2.96e-62 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 201.59 E-value: 2.96e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 2 MYSLIMSSVATGTIITMTSYHWLLAWIGLELNTLAIIPIIAKQHNPRATEATTKYFLTQAAASATILFASTINAWqtgtw 81
Cdd:MTH00160 6 SKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML----- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 82 dISQLTNQPSCILLTMALAMKLGLTPMHFWLPEVLQGTTLKTALIITTWQKLAPatlLYLVYHSTNPTILLTMGIMSTIV 161
Cdd:MTH00160 81 -NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAP---LILLSYLINNNFIIIIIILSAII 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 162 GGWGGLNQTQMRKIMAFSSIANLGWMVTILTINPNIMLLNLALYILMTTPLFLALMFTASKTIKDLTTTWTISPPITAML 241
Cdd:MTH00160 157 GAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFLL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 242 LMLLMSMGGLPPLTGFIPKWLILQELTTHNLTATATVMALSALLSLFFYLRLSYTSTLTvfpTTTKNTYKWRFQPKLNTL 321
Cdd:MTH00160 237 FLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLML---NYNKNKWNLKKKKNKFSL 313
|
330
....*....|....*..
gi 564732281 322 PMATTTAISLLLLPMTP 338
Cdd:MTH00160 314 ILNFLSFISLFGLILSS 330
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
4-334 |
5.40e-58 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 190.10 E-value: 5.40e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 4 SLIMSSVATGTIITMTSYHWLLAWIGLELNTLAIIPIIAKQHNPRATEATTKYFLTQAAASATILFASTINAWQTGTWDI 83
Cdd:MTH00144 7 LLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFS 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 84 SqltnqpscILLTMALAMKLGLTPMHFWLPEVLQGTTLKTALIITTWQKLAP-ATLLYLVYHSTNPTILLTMGIMSTIVG 162
Cdd:MTH00144 87 M--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPlFLLSNFLDLYWLAYLLCVISVLSALVG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 163 GWGGLNQTQMRKIMAFSSIANLGWMVTILTINPNIMLLNLALYILMTTPLFLALMFTASKTIKDLTTTwTISPPITAMLL 242
Cdd:MTH00144 159 SIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSL-KPSYKTGLSII 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 243 MLLMSMGGLPPLTGFIPKWLILQELTTHNLTATATVMALSALLSLFFYLRLSYTSTLTVFPTTTKNTYKWRFQPkLNTLP 322
Cdd:MTH00144 238 SLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKVLNSS-IISLN 316
|
330
....*....|..
gi 564732281 323 MATTTAISLLLL 334
Cdd:MTH00144 317 LLGGLLFLLLYL 328
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
4-298 |
1.42e-47 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 163.41 E-value: 1.42e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 4 SLIMSSVATGTIITMTSYHWLLAWIGLELNTLAIIPIIAKQHNPRATEATTKYFLTQAAASATILFASTInawqtgTWDI 83
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM------MWSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 84 SQLTNQPSCILLTMALAMKLGLTPMHFWLPEVLQGTTLKTALIITTWQKLAPATLLYLVYHSTNPTILLTMGIMSTIVGG 163
Cdd:MTH00011 83 PSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 164 WGGLNQTQMRKIMAFSSIANLGWMVTILTINPNIMLLNLALYILMTTPLFLALMFTASKTIKDLTTTWTISPPITAMLLM 243
Cdd:MTH00011 163 LGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFI 242
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 564732281 244 LLMSMGGLPPLTGFIPKWLILQELTTHNLTATATVMALSALLSLFFYLRLSYTST 298
Cdd:MTH00011 243 MLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNFM 297
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
4-297 |
2.25e-40 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 144.04 E-value: 2.25e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 4 SLIMSSVATGTIITMTSYHWLLAWIGLELNTLAIIPIIAKQHNPRATEATTKYFLTQAAASATILFASTINAWQTgtwdi 83
Cdd:MTH00197 1 FLFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL----- 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 84 sqLTNQPSCILLTMALAMKLGLTPMHFWLPEVLQGTTLKTALIITTWQKLAPatLLYLVYHSTNPTILLTMGIMSTIVGG 163
Cdd:MTH00197 76 --YLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGG 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 164 WGGLNQTQMRKIMAFSSIANLGWMVTILTINPNIMLLNLALYILMTTPLFLALMFTASKTIKDLTTTWTISPPITAMLLM 243
Cdd:MTH00197 152 IGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGL 231
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 564732281 244 LLMSMGGLPPLTGFIPKWLILQELTTHNLTATATVMALSALLSLFFYLRLSYTS 297
Cdd:MTH00197 232 SFLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKS 285
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
2-293 |
6.34e-28 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 113.38 E-value: 6.34e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 2 MYSLIMSSVAtGTIITMTSYHWLLAWIGLELNTLAIIPIIA-KQHNPRATEATTKYFLTQAAASATILFASTINAWQTGT 80
Cdd:PRK05777 105 FYLLVLFALL-GMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGS 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 81 WDISQLTNQPS------------CILLTMALAMKLGLTPMHFWLPEVLQGTTLKTALIITTWQKLAP----ATLLYLVYH 144
Cdd:PRK05777 184 LSFAGIAKALAdgsgnsllllfgLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAfavlLRLLVVAFG 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 145 STNPT---ILLTMGIMSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINPNI----MLLNLALYILMTTPLFLALM 217
Cdd:PRK05777 264 GLSEDwqqVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEgysaVLFYLLAYLFMTLGAFGVIS 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 218 FTASK-----TIKDLTTTWTISPPITAMLLMLLMSMGGLPPLTGFIPKWLILQELTTHNLTATATVMALSALLSLFFYLR 292
Cdd:PRK05777 344 LLRRKggeaeSISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLR 423
|
.
gi 564732281 293 L 293
Cdd:PRK05777 424 V 424
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
3-293 |
8.76e-27 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 109.82 E-value: 8.76e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 3 YSLIMSSVAtGTIITMTSYHWLLAWIGLELNTLAIIPIIA-KQHNPRATEATTKYFLTQAAASATILFASTINAWQTGTW 81
Cdd:COG1007 105 YALLLFATL-GMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSL 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 82 DISQL-----TNQPSCILLTMALAM-------KLGLTPMHFWLPEVLQGTTLKTALIITTWQKLAPATLLYLVYHSTNP- 148
Cdd:COG1007 184 NLAGIaaalaAGGANSPLLLLGLVLvlaglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLVEAFPg 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 149 ------TILLTMGIMSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINPNI----MLLNLALYILMTTPLFLALMF 218
Cdd:COG1007 264 laadwqLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLgvsaALFYLLAYLFMNLGAFAVILL 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 219 TASK-----TIKDLTTTWTISPPITAMLLMLLMSMGGLPPLTGFIPKWLILQELTTHNLTATATVMALSALLSLFFYLRL 293
Cdd:COG1007 344 LSRKggeaeEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRV 423
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
20-265 |
9.81e-26 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 104.32 E-value: 9.81e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 20 SYHWLLAWIGLELNTLAIIPIIA-KQHNPRATEATTKYFLTQAAASATILFASTINAWQTGTWDISQLTNQPSC------ 92
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGyWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGglnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 93 -----ILLTMALAMKLGLTPMHFWLPEVLQGT-TLKTALIITTWQKLAPATLL--YLVYHSTNPT---ILLTMGIMSTIV 161
Cdd:pfam00361 81 llllfLLILVGFLFKSAQVPFHTWLPDAYEGApTPVSALLAATLVKAGGYGLIrrSLLYLPSSPFiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 162 GGWGGLNQTQMRKIMAFSSIANLGWMVTILTINPNI----MLLNLALYILMTTPLFLA-----LMFTASKTIKDLTTTWT 232
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqaAIFHLLTHGLFSAGLFLCagsviYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 564732281 233 ISPPITAMLLMLLMSMGGLPPLTGFIPKWLILQ 265
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
3-293 |
1.97e-24 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 103.10 E-value: 1.97e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 3 YSLIMSSVaTGTIITMTSYHWLLAWIGLELNTLAIIPIIA-KQHNPRATEATTKYFLTQAAASATILFASTINAWQTGTW 81
Cdd:TIGR01770 105 YILLLFAL-LGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSL 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 82 DISQLTNQPSC------------ILLTMALAMKLGLTPMHFWLPEVLQGTTLKTALIITTWQKLA---PATLLYL----V 142
Cdd:TIGR01770 184 NFEDLLLFLSNgmlnisllllgiVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAifaVFLRLFLyilfG 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 143 YHSTNPTILLTMGIMSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINPNI----MLLNLALYILMTTPLFLALMF 218
Cdd:TIGR01770 264 FSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEgikaVLFYIFIYALMSLGAFGVLSL 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 219 TAS------KTIKDLTTTWTISPPITAMLLMLLMSMGGLPPLTGFIPKWLILQELTTHNLTATATVMALSALLSLFFYLR 292
Cdd:TIGR01770 344 LRSykdewiEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLR 423
|
.
gi 564732281 293 L 293
Cdd:TIGR01770 424 V 424
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
3-293 |
3.56e-23 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 99.71 E-value: 3.56e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 3 YSLIMSSVATGTIITMTSYHWLLAWIGLELNTLAIIPIIA-KQHNPRATEATTKYFLTQAAASATILFASTINAWQTGTW 81
Cdd:MTH00199 99 SPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGET 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 82 DI----SQLTNQPSCILLTMALAMKLGLTPMHFWLPEVLQGTTLKTALIITTWQKLAPATLLYLVYHSTNptILLTMGIM 157
Cdd:MTH00199 179 SIqginSILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTN--VVLICAVL 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 158 STIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINPN----IMLLNLALYILMTTPLFLALMFT--ASKTIKDLTTTW 231
Cdd:MTH00199 257 SIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFesiqASLIYMIIYVIMSICSFSIILSLklTKGLIVEVSGLS 336
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 564732281 232 TISPPITAMLLMLLMSMGGLPPLTGFIPKWLILQELTTHNLTATATVMALSALLSLFFYLRL 293
Cdd:MTH00199 337 RKNPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
10-293 |
1.10e-22 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 97.02 E-value: 1.10e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 10 VATGTIITMTSYHWLLAWIGLELNTLAIIPIIAKQHNP-RATEATTKYFLTQAAASATILFA-------------STINA 75
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSgYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 76 WQTGTWDISQLTNQPSCILLTMALAMKLGLTPMHFWLPEVLQGTTLKTALIITTWQKLApaTLLYLVYHSTNPTILLTMG 155
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLG--IFSILVSIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 156 IMSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINP----NIMLLNLALYILMTTPLFLALMftASKTIKDLTTTW 231
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFSIIL--ALNVYKNLIIEF 237
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 564732281 232 T----ISPPITAMLLMLLMSMGGLPPLTGFIPKWLILQELTTHNLTATATVMALSALLSLFFYLRL 293
Cdd:MTH00196 238 SglsrRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
27-293 |
9.91e-21 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 92.13 E-value: 9.91e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 27 WIGLELNTLAIIPIIAKQHNPRATEATTKYFLTQAAASATILFASTINAWQTGTWDISQLTN----------QPSCILLT 96
Cdd:COG0651 133 FVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAArlaeldpgllLAAFALLL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 97 MALAMKLGLTPMHFWLPE-----------VLQGTTLKTAL--IITTWQKLAPATLLYLVyhstnPTILLTMGIMSTIVGG 163
Cdd:COG0651 213 VGFGIKAALFPLHFWLPDaypaapspvsaLLSGLLTKVGVyaILRVLTLLFGADPALFL-----GTLLLVLGLLTMLVGA 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 164 WGGLNQTQMRKIMAFSSIANLGWMVTILTINPNIMLLNLALYILMTTpLFLALMFTASKTIKDLTTTWTIS--------P 235
Cdd:COG0651 288 LGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHA-LAKALLFLAAGAIERATGTRDLDklgglgkrM 366
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 564732281 236 PITAMLLMLLMSMGG-LPPLTGFIPKWLILQELTTHNLTATATVMALSALLSLFFYLRL 293
Cdd:COG0651 367 PLTAAAFLIGALALAgLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
2-333 |
7.54e-13 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 69.25 E-value: 7.54e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 2 MYSLIMSSVATGTIITMTSYHWLLAWIGLELNTLA---IIPIIAKqhnpRATEATTKYFLTQAAASATILFASTINAWQT 78
Cdd:PRK08668 99 YFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSsfmMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYAKT 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 79 GTWDISQ----LTNQPS-------CILLTMALAMKLGLTPMHFWLPE-----------VLQGTTLKT-ALIITTWQKLAP 135
Cdd:PRK08668 175 GTFDFADisqgLINDTStgfalivFLFLLAFGVAKAGIFPLHVWAPDayseapqsfsaVLSGQLSKLgAYGFLLVLYVLP 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 136 ATLLYL---VYHSTN--PTILLTMGIMSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINPNIMLLNlALYILMTT 210
Cdd:PRK08668 255 GTKLFSefgTYRGVPlfNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAG-GLFHVFNH 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 211 PLFLALMFTASKTIKDLTTTWTISP--------PIT-AMLLMLLMSMGGLPPLTGFIPKWLILQELTTHNLTATATVMAL 281
Cdd:PRK08668 334 ALFKGLFFLIFAAVIYRTGTTKISEmggliekmPFTfAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFF 413
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 564732281 282 SALLSLFFYLRLSYTSTLTVFPTTTKNTykwrfqpKLNTLPMATTTAISLLL 333
Cdd:PRK08668 414 GSIGSFLYVFRPLAGVFLGQLPSDHKDV-------KEAPLPMLIPMAILVLL 458
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
10-296 |
7.57e-12 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 66.04 E-value: 7.57e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 10 VATGTIITMTSYHWLLAWIGLELNTLAIIPIIAKQHNPRAT---------EATTKYFLTQAAASATILFASTINAWQTG- 79
Cdd:MTH00198 197 VGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGn 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 80 -------------TWDISQLTNQPSCILLTMALAMKLGLTPMHFWLPEVLQGT-TLKTALIITTWQKLAPATLLYLVYHS 145
Cdd:MTH00198 277 egmlgtilsatleTTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGApTPTTALIAIIPKFTVYILLTSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 146 TnptILLTMGIMSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINPNIMLLNLALYILMTTPLFLAlMFTASKTIK 225
Cdd:MTH00198 357 K---LLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTYLVSALA-SFTVICTLE 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 226 --------------------------DLTTTWTISPPITAMLLMLLMSMGGLPPLTGFIPKWLILQELTTHNLTATATVM 279
Cdd:MTH00198 433 efgtrtptsrqrdgsfgnynlvrrlvDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIY 512
|
330 340
....*....|....*....|....
gi 564732281 280 ALSALL-------SLFFYLRLSYT 296
Cdd:MTH00198 513 YLVALFaiictciSAFYYIRIVAT 536
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
30-333 |
2.85e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 64.13 E-value: 2.85e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 30 LELNTLAIIPIIAKQHNPRATEATTKYFLTQAAASATILFASTINAWQTGTWDISQLTNQ--PSCILLTM------ALAM 101
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGAlaENPTVVTAfgfvllALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 102 KLGLTPMHFWLPEVLQGTTLKTALIITTWQKLAPATLLYLVY----------HSTNPTILLTMGIMSTIVGGWGGLNQTQ 171
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfggdfrfALGLGWLLAVLALLSMLVGSLAALGQDD 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 172 MRKIMAFSSIANLGWMVTILTINPNIMLLNLALYI----LMTTPLFLAL----MFTASKTIKDLTTTWTISPPITAMLLM 243
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLlhhaLMKGALFLAAgaieVTYGTRRLSELSGLGRRMPLTAAAFAV 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 244 LLMSMGGLPPLTGFIPKWLILQELTTHNLTATATVMALSALLSLFFYLRLSYTSTLTVFPTTTKNTYKwrFQPKLNTLPM 323
Cdd:PRK08375 375 ASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPPGSEAPKQ--EAPLGMLAPS 452
|
330
....*....|
gi 564732281 324 ATTTAISLLL 333
Cdd:PRK08375 453 LALALLSLLL 462
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
48-260 |
1.18e-09 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 59.25 E-value: 1.18e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 48 RATEATTKYFLTQAAASATILFAST----INAWQTGTWDI------SQLTNQPSC----ILLTMALAMKLGLTPMHFWLP 113
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYGFSwlygLSGGEIELQEIvnglinTQMYNSPGIsialIFITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 114 EVLQGTTLKTALIITTWQK---LAPAT-LLYLVYHSTNP---TILLTMGIMSTIVGGWGGLNQTQMRKIMAFSSIANLGW 186
Cdd:CHL00049 239 DVYEGSPTPVVAFLSVTSKvaaSALATrIFDIPFYFSSNewhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGY 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 187 -MVTILTINPNI----MLLNLALYILMTTPLFLALMFTASKT----IKDLTTTWTISPPITAMLLMLLMSMGGLPPLTGF 257
Cdd:CHL00049 319 vIIGIIVGDSNDgyasMITYMLFYIFMNLGTFACIVLFGLRTgtdnIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGF 398
|
...
gi 564732281 258 IPK 260
Cdd:CHL00049 399 FGK 401
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
30-296 |
3.08e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 58.18 E-value: 3.08e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 30 LELNTLAIIPIIAKQHN-PRATEATTKYFLTQAAASATILFASTINAWQTGTWDI----SQLTNQPSCI------LLTMA 98
Cdd:PRK08376 150 LEIMSIASYALVAFRNDtWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMaylaVKMSENPTVVakialaLFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 99 LAMKLGLTPMHFWLPE---VLQGTTLKTALIITTWQKLAPATLLYLVYH-----STNPTILLTMGIMSTIVGGWGGLNQT 170
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDaypAAPSSISAMLLVIKQAGLYALARVLFSIYGpainlATVGWVIIILGCLTMFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 171 QMRKIMAFSSIANLGWM-----VTILTINPNIM------LLNLALYILMTTPLFLALMFTASKTIKDLTTTWTIS----- 234
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMllglgVGLAALGDPAMasygeiALAGGIYHIVNHALYKALLFLTAGAVIYETGTRNLNelggl 389
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 564732281 235 ----PPITAMLLMLLMSMGGLPPLTGFIPKWLILQELTTHNLTATATVMALSAlLSLFFYLRLSYT 296
Cdd:PRK08376 390 artmPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSV-LTLASFVKVFHT 454
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
77-284 |
3.10e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 55.32 E-value: 3.10e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 77 QTGTWDISQL-TNQPSCILLTMALAM-------KLGLTPMHFWLPEVLQGTTLKTALI---------ITTWQKLAPAtll 139
Cdd:PRK12644 183 AAGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLhaaamvkagIYLVARLAPG--- 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 140 ylvYHSTNP--TILLTMGIMSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTI-NPNIMLLNLALyiLMTTPLFLAL 216
Cdd:PRK12644 260 ---FADVPVwrPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIgTRDAALAGLAM--LLAHALFKAA 334
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 564732281 217 MF---------TASKTIKDLTTTWTISPPITAMLLMLLMSMGGLPPLTGFIPKWLILQELTTHNLTATATVMALSAL 284
Cdd:PRK12644 335 LFlvvgiidhsTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVLHDGALGPAGPVVLAGI 411
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
288-338 |
3.90e-08 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 49.18 E-value: 3.90e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 564732281 288 FFYLRLSYTSTLTVFPTTTKNTYKWRFQPKLNTLPMATTTAISLLLLPMTP 338
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLLLPTLTTLSILLLPLTP 51
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
46-260 |
1.48e-07 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 52.75 E-value: 1.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 46 NPRATEATTKYFLTQAAASATILFAST----INAWQTGTWDISQ-LTNQPScILLTMAL-------AMKLGLTPMHFWLP 113
Cdd:PRK02504 156 DPRSNEAALKYLLIGAASSAIFLYGSSllygLSGGSTQLSAIALaLITSPS-LGLALALvfviagiAFKISAVPFHQWTP 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 114 EVLQGTTLKTALIITTWQKLA----PATLLYLVYHSTNP---TILLTMGIMSTIVGGWGGLNQTQMRKIMAFSSIANLGW 186
Cdd:PRK02504 235 DVYEGSPTPVVAFLSVGSKAAgfalAIRLLVTAFPSFDEqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGF 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 187 MVTILTINPNI----MLLNLALYILMTTPLFLALMF----TASKTIKDLTTTWTISPPITAMLLMLLMSMGGLPPLTGFI 258
Cdd:PRK02504 315 VMIGLVAGTEAgyasMVFYLLAYLFMNLGAFACVILfslrTGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFF 394
|
..
gi 564732281 259 PK 260
Cdd:PRK02504 395 GK 396
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
2-295 |
2.31e-06 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 49.17 E-value: 2.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 2 MYSLIMSsVATGTIITMTSYHWLLAWIGLELNTLAIIPIIAKQHNPRATEATTKYFLTQAAASATILFASTINAWQTG-T 80
Cdd:TIGR01972 108 FYALLLL-LEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgT 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 81 WDISQLTNQPSC--------ILLTMALAMKLGLTPMHFWLPEV-----------LQGTTLKTAL--IITTWQKLAPATLL 139
Cdd:TIGR01972 187 FDLLELLNLPLPfgvqtwlfLAFFIAFAVKVPLFPLHTWLPDAhveaptagsviLAGVLLKMGTygFLRFNLPLFPDASL 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 140 YLVyhstnpTILLTMGIMSTIVGGWGGLNQTQMRKIMAFSSIANLGWmVTILTINPNIMLLNLALYILMTTPLFLALMFT 219
Cdd:TIGR01972 267 YFA------PVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGF-VLLGIFSFNELGISGAVFQMISHGLITAALFL 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 220 ASKTIKDLTTTWTIS---------PPITAMLLMLLMSMGGLPPLTGFIPKWLILQELTTHNLTAT---ATVMALSALLSL 287
Cdd:TIGR01972 340 LVGVLYERAHTRDIAkygglankmPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVNPVVAflaALGIVLAAAYML 419
|
....*...
gi 564732281 288 FFYLRLSY 295
Cdd:TIGR01972 420 TLYKRVFF 427
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
149-293 |
3.78e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 48.19 E-value: 3.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 149 TILLTMGIMSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINPNIMLLNLALYI----LMTTPLFLALMFTASK-- 222
Cdd:PRK12662 280 NVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIvnhsIVKSALFMVSGSISYHfg 359
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 564732281 223 --TIKDLTTTWTISPPITAMLLMLLMSMGGLPPLTGFIPKWLILQELTTHNLTATATVMALSALLSLFFYLRL 293
Cdd:PRK12662 360 ttKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKI 432
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
94-296 |
6.18e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 47.66 E-value: 6.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 94 LLTMALAMKLGLTPMHFWLPEV-----------LQGTTLKTALIittwqklAPATLLYLVYHSTNPT---------ILLT 153
Cdd:PRK12667 228 LALWAFTIKAAIFPNHFWLPDAhpaapspvsamLSGLVVNVGAY-------AIIRFLYTIFGISPSLidfraalspILII 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 154 MGIMSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINPNIMLLNLALYIL----MTTPLFLA----LMFTASKTIK 225
Cdd:PRK12667 301 LGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIInhaiAKSLLFLAsgvfIHAAGTRDID 380
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 564732281 226 DLTTTWTISPPITAMLLMLLMSMGGLPPLTGFIPKWLILQELTTHNLTATATVMALSALLSLFFYLRLSYT 296
Cdd:PRK12667 381 ELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYS 451
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
92-300 |
1.72e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 46.61 E-value: 1.72e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 92 CILLTMALAMKLGLTPMHFWLPEVLQGTTLKTALIITTWQKLAPATLL-----YLVYHSTNPTILLTMGIMSTIVGGWGG 166
Cdd:MTH00020 213 CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLirsspLFEQAPLALIIVTIVGSLTVFFAATVG 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 167 LNQTQMRKIMAFSSIANLGWMVTILTINpnimLLNLALYILMTTPLFLALMFTASKTI-------KDLTTTWTIS---PP 236
Cdd:MTH00020 293 LVQNDLKKVIAYSTCSQLGYMVVACGLS----HYSISLFHLMNHAFFKALLFLSAGSVihalsdeQDMRKMGGLIsflPL 368
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 564732281 237 ITAMLLMLLMSMGGLPPLTGFIPKWLILQ-ELTTHNLTATATVMALSALLSLFFYLRLSYTSTLT 300
Cdd:MTH00020 369 TYIFFLIGSLSLMGFPYLTGFYSKDLILElAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLS 433
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
97-295 |
1.76e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 46.45 E-value: 1.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 97 MALAMKLGLTPMHFWLPE-----------VLQGTTLKT---ALIITTW-------QKLAPAtllylvyhstnptiLLTMG 155
Cdd:MTH00226 238 LAMAVKIPIFPFHIWLPKahveapvagsvLLAGILLKLggyGLVRLSWpilplgaQNLAPA--------------VIAMG 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 156 IMSTIVGGWGGLNQTQMRKIMAFSSIANLGwMVTILTINPNIMLLNLALYILMTTPLFLALMFTASKTIKDLTTT----- 230
Cdd:MTH00226 304 IVGIVYGSFATCRQIDVKRLVAYSSVAHMG-LVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTrliky 382
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 564732281 231 ---WTISPPITAMLLMLLMSM-GGLPPLTGFIPKWL-ILQELTTHNLTA--TATVMALSALLSLFFYLRLSY 295
Cdd:MTH00226 383 yrgLSITMPIWGTIMIVTSLAnVAVPPSGNFIGEYLsILSSFNWNPIIGvfVCSGVILSAVYSFYFANRVTF 454
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
75-293 |
1.93e-05 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 46.30 E-value: 1.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 75 AWQTGTWDISQLTNQPS-----------CILLTMALAMKLGLTPMHFWLPE----------VLQGTTLKTA---LIIttw 130
Cdd:COG1009 186 GAIAGTLNFSELLAAAPtilssplltliLLLLLLGAFGKSAQFPLHFWLPDamegptpvsaLLHAATMVKAgvyLLA--- 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 131 qKLAPATLLYLVYHstnpTILLTMGIMSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINpnimLLNLALYILMTT 210
Cdd:COG1009 263 -RLSPLFALSPVWL----TVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG----AYVAALFHLLTH 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 211 PLFLALMF---------TASKTIKDLTTTWTISPPITAMLLMLLMSMGGLPPLTGFIPKWLILQELTTHNLTATA--TVM 279
Cdd:COG1009 334 AFFKALLFlgagsvihaTGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLllAVA 413
|
250
....*....|....
gi 564732281 280 ALSALLSLFFYLRL 293
Cdd:COG1009 414 LLGAFLTAFYSFRL 427
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
137-293 |
2.67e-05 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 45.71 E-value: 2.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 137 TLLYLVYHSTNPTILLTMGIMSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINpNIMLLNLALY-----ILMTTP 211
Cdd:PRK12663 261 TLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALG-TPAGINGAIFylvhdMVVKTA 339
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 212 LFLAL----MFTASKTIKDLTTTWTISPPITAMLLMLLMSMGGLPPLTGFIPKWLILQELTTHNLTATATVMALSALLSL 287
Cdd:PRK12663 340 LFLIAgslvRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITM 419
|
....*.
gi 564732281 288 FFYLRL 293
Cdd:PRK12663 420 YSLFRI 425
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
24-185 |
5.72e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 44.64 E-value: 5.72e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 24 LLAWIGLELNTLAIIPIIAKQHNPRATEATTKYFLTQAAASATILFASTINAWQTG--TWDISQLTNQPSCILLTM---- 97
Cdd:PRK12561 110 LLFFLMWELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLALALSGDtfTFDLAELGAKSYPLALELllya 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 98 ----ALAMKLGLTPMHFWLPE-----------VLQGTTLKT---ALIITTWQKLAPAtllylvyHSTNPTILLTMGIMST 159
Cdd:PRK12561 190 gfliAFGVKLPIFPLHTWLPDahgeasapvsmILAGVLLKMggyALIRFNVQMLPDA-------HVYFAPALAILGVVNI 262
|
170 180
....*....|....*....|....*.
gi 564732281 160 IVGGWGGLNQTQMRKIMAFSSIANLG 185
Cdd:PRK12561 263 IYGALNAFAQDNVKRRLAYSSVSHMG 288
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
35-292 |
6.69e-05 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 44.30 E-value: 6.69e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 35 LAIIP---IIAKQHNPRATEATTKYFLTQAAASATILFASTINAWQTG--TWDISQLTNQP--------SCILLTMALAM 101
Cdd:COG1008 142 LMLIPmyfLIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGalTFDIAELAAAPlpltaqllLFLAFFIAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 102 KLGLTPMHFWLPE-----------VLQGTTLKTA------LIITtwqkLAPATLLYLVYhstnptILLTMGIMSTIVGGW 164
Cdd:COG1008 222 KVPMFPFHTWLPDahveaptagsvLLAGVLLKMGgygllrFALP----LFPEASAYFAP------LLAALGVIGIIYGAL 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 165 GGLNQTQMRKIMAFSSIANLGWMVT-ILTINPN----IMLLNLAlYILMTTPLFLALMFTASKT----IKDLTTTWTISP 235
Cdd:COG1008 292 VALAQTDLKRLIAYSSVSHMGFVLLgIFALNPLglqgAVLQMVS-HGLITAALFLLVGVLYDRThtrdIADLGGLAKRMP 370
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 236 PITAMLLMLLMSMGGLPPLTGFIPKWLILQELTTHNLTAT---ATVMALSALLSLFFYLR 292
Cdd:COG1008 371 VLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAilaALGLILTAAYLLWMYQR 430
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
25-288 |
1.31e-04 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 43.88 E-value: 1.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 25 LAWIGLELNTLAIIPIIAKQhNPRATEATTKYFLTQAAASATILFASTINAWQTGTWDISQLTNQPS-----------CI 93
Cdd:PRK12650 134 VLFVAWELVSLASFFLIARS-GSGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVwaekpglttvvAV 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 94 LLTMALAMKLGLTPMHFWLPEVLQGTTLKTALIITTWQKLAPATLLYL---VYHStNPT---ILLTMGIMSTIVGGWGGL 167
Cdd:PRK12650 213 LIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRfspVFHD-VAVwnwLLIIVGMITALMGAVFAV 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 168 NQTQMRKIMAFSSIANLGWMVTILTINPNIMLlNLALYILMTTPLFLALMF---------TASKTIKDLTTTWTISPPIT 238
Cdd:PRK12650 292 QKTDLKKLTAYSTVSQLGWIVATIGVGTPFAL-TAAVVHTLAHALFKSSLFmligvvdhqAGTRDIRRLGSLWRRMPFTF 370
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 564732281 239 AMLLMLLMSMGGLPPLTGFIPKWLILQEL--TTHNLTATATVMALSALLSLF 288
Cdd:PRK12650 371 VSVTIAALSMAAVPPLFGFVSKEGMLTAFleAPGGNAGVVLLLVGAALGAVF 422
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
93-265 |
1.35e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 43.79 E-value: 1.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 93 ILLTMALAMKLGLTPMHFWLPEVLQGTTLKTALIITTWQKLAPATLLYLVY--HSTNPTILLTMGIMSTIVGGWG---GL 167
Cdd:MTH00032 229 ILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFplFEKAPLTLLIITIFGALTAFFAatvGL 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 168 NQTQMRKIMAFSSIANLGWMVTILTINPNimlLNLALYILMTTPLFLALMFTASKTIKDLTTT----------WTISPPI 237
Cdd:MTH00032 309 VQNDLKKVIAYSTCSQLGYMVLIIGIEGS---HNVGLFHLVNHAFFKALLFLSAGSVIHSTTVdeqdmrkmggLIHSIPF 385
|
170 180
....*....|....*....|....*....
gi 564732281 238 TAMLLML-LMSMGGLPPLTGFIPKWLILQ 265
Cdd:MTH00032 386 TYTMMLIgSFSIMGLPYLTGFYSKDLILE 414
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
76-221 |
1.56e-04 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 43.47 E-value: 1.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 76 WQTGTWD-------ISQLTNQPS---------CILLTMALAMKLGLTPMHFWLPEVLQGTTLKTALIITTWQKLAPATL- 138
Cdd:PRK07376 198 WATGSFDfdgiadrLSELVSSGAvsgwlalllCILVFLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLv 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 139 --LYLVYhSTNPTILLTMGIMSTI---VGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINPNIMllnlALYILMTTPLF 213
Cdd:PRK07376 278 arMYPVF-EQFPAVMTVIAWTGAItafLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSA----GLFHLMTHAYF 352
|
....*...
gi 564732281 214 LALMFTAS 221
Cdd:PRK07376 353 KAMLFLGS 360
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
78-288 |
3.25e-04 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 42.43 E-value: 3.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 78 TGTWDISQLTNQ-----------PSCILLTMALAMKLGLTPMHFWLPEVLQGTTLKTALIITTWQKLAPATLLY-----L 141
Cdd:PRK12646 188 TGTNNITEILGQadhiknhglfiPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFrftplL 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 142 VYHSTNPTILLTMGIMSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINPN-------------IMLLNLALYILM 208
Cdd:PRK12646 268 GLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGyaqhqqdaiasiyVFVLFAALFHLM 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 209 TTPLFLALMF---------TASKTIKDLTTTWTISPPITAMLLMLLMSMGGLPPLTGFIPKWLIL------QELTTHNLT 273
Cdd:PRK12646 348 NHAIFKCALFmgvgiidheAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLdaltqtGQLSQFSLI 427
|
250
....*....|....*
gi 564732281 274 ATATVMALSALLSLF 288
Cdd:PRK12646 428 SMIIIVFIGVIASIF 442
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
79-297 |
4.73e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 41.94 E-value: 4.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 79 GTWDISQLTNQPSCILLTMALAMKLGLT-----PMHFWLPEVLQGTTLKTALIITTWQKLAPATLLYLVYHSTNPT---- 149
Cdd:MTH00209 160 GNWNIFYLNFNSNLGSVISVLIVLAAMTksaqiPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSpffs 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 150 -ILLTMGIMSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINpnimLLNLALYILMTTPLFLALMFTA-------- 220
Cdd:MTH00209 240 mSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLN----QPELAFFHLITHALFKALLFICagniihsh 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 221 --SKTIKDLTTTWTISPPITAMLLMLLMSMGGLPPLTGFIPKWLILQELTTHNLT-ATATVMALSALLSLFFYLRLSYTS 297
Cdd:MTH00209 316 ghSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPiMTLILMFLSTSLTAAYSMRLSYFS 395
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
25-220 |
6.91e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 41.28 E-value: 6.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 25 LAWIGLELNTLAIIPIIAKQHNPRATEATTKYFLTQAAA------SATILFASTINAWQTGTWDISQLTNQP-------- 90
Cdd:PRK08676 126 LFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNWTELAAHAsllspsvl 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 91 --SCILLTMALAMKLGLTPMHFWLPEV-LQGTTLKTALIITTWQKLAPATLLYLV-------YHSTNPTILLTMGIMSTI 160
Cdd:PRK08676 206 gaSFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSallrqsgAAEQFSNVLIGLGIFSIA 285
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 161 VGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINPNIMLLNLALYILMTTPLFLALMFTA 220
Cdd:PRK08676 286 VAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSA 345
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
24-297 |
1.13e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 40.52 E-value: 1.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 24 LLAWIGLELntLAIIPIIAKQhNPRATEATTKYFLTQAAASATILFASTINAWQtGTWDISQLTNQPSCILLTMAL---A 100
Cdd:MTH00207 114 LLGWDGLGL--VSFILVIYYQ-NPKSLGAGMITALTNRIGDVMLLLSIGWTLNQ-GHWSITNMWQTDMNNYIALSImiaA 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 101 M-KLGLTPMHFWLPEVLQGTTLKTALIITTWQKLAPATLLYLVY---HST---NPTILLTmGIMSTIVGGWGGLNQTQMR 173
Cdd:MTH00207 190 MtKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYpflSSTywfNPALLLT-ASLTMLMAGLSAMTECDMK 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 174 KIMAFSSIANLGWMVTILTINpnimLLNLALYILMTTPLFLALMFTASKTI-------KDLTT---TWTISPPITAMLLM 243
Cdd:MTH00207 269 KIIALSTLSQLGVMMASLGLG----MPKLALFHLITHALFKALLFVCAGSLihshhhsQDLRTmgnLTNQMPLTTSCLLI 344
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 564732281 244 LLMSMGGLPPLTGFIPKWLILQELTTHNLTATATVMALSAL-LSLFFYLRLSYTS 297
Cdd:MTH00207 345 ANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATaLTAAYSTRFTLAV 399
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
104-265 |
1.82e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 40.20 E-value: 1.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 104 GLTPMHFWLPEV-LQGTTLKTALIITTWQKLAPATLLYLVYHSTNP-----TILLTMGIMSTIVGGWGGLNQTQMRKIMA 177
Cdd:PRK08042 195 GIIPLHGWVPQAhANASAPAAALFSTVVMKIGLLGILTLSLLGGNAplwwgVALLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 178 FSSIANLG--------WMVTILTINPNIMLLNL--ALYILMTTPLFLALMF---------TASKTIKDLTTTWTISPPIT 238
Cdd:PRK08042 275 YHTLENIGiillglgaGVTGIALEQPALIALGLvgGLYHLLNHSLFKSVLFlgagsvwfrTGHRDIEKLGGIGKKMPVIS 354
|
170 180
....*....|....*....|....*..
gi 564732281 239 AMLLMLLMSMGGLPPLTGFIPKWLILQ 265
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGEWVIYQ 381
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
92-323 |
2.25e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 39.61 E-value: 2.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 92 CILLTMALAMKLGLTPMHFWLPEVLQGTTLKTALIITTWQKLAPATLLY----LVYHSTNPTILLT-MGIMSTIVGGWGG 166
Cdd:MTH00210 214 CLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIrsgpLFEGSPLALTIVTiLGALTAFFAATVG 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 167 LNQTQMRKIMAFSSIANLGWMVTILTINPnimlLNLALYILMTTPLFLALMF-TASKTIKDLTTTWTI--------SPPI 237
Cdd:MTH00210 294 VVQNDLKKVIAYSTCSQLGYMVMVCGISN----YSTSLFHLMNHAFFKALLFlSAGSVIHAVSDEQDMrkmgglikSIPF 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 238 TAMLLML-LMSMGGLPPLTGFIPKWLILQELTTHNLTATATVMA-LSALLSLFFYLRLSYTSTLTVfPTTTKNTYKWRFQ 315
Cdd:MTH00210 370 TYVMILIgSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGsFSALLTAFYSIRLIYLTFITN-TNSKKEVFIGVHE 448
|
....*....
gi 564732281 316 PKLN-TLPM 323
Cdd:MTH00210 449 SSWNiTFPL 457
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
21-287 |
2.73e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 39.49 E-value: 2.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 21 YHWLLAWiglELNTLA-IIPIIAKQHNPRATEATTKYFLTQAAASATILFASTINAWQTGTWDISQLTNQP------SCI 93
Cdd:PRK06521 136 FSFLVAW---ETMSLSsWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMRAAHlspfwaSLV 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 94 LLTMAL--AMKLGLTPMHFWLPE-----------VLQGTTLKTAL--IITTWQKLAPATLLYLVYhstnptILLTMGIMS 158
Cdd:PRK06521 213 FLLALFgfGAKAGLVPLHVWLPRahpaapshvsaLMSGVMLKVAIygILRVVFDLLGAPGWWWGV------LVLALGAIS 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 159 TIVGGWGGLNQTQMRKIMAFSSIANLGW--------MVTILTINPNIMLLNL--ALYILMTTPLFLALMFTASKTIkdLT 228
Cdd:PRK06521 287 AVLGVLYALAEHDLKRLLAYSTIENIGIifvglglaMVFIAYGMPLLAALALtaALYHLLNHALFKSLLFLGAGAV--LH 364
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 564732281 229 TTWT---------ISP-PITAMLLML-LMSMGGLPPLTGFIPKWLILQEL--TTH--NLTATATVMALSALLSL 287
Cdd:PRK06521 365 ATGTrdmeklgglIRRmPWTAWAFLIgCLAISALPPLNGFVSEWLLLQSLlsSPGlpQWGLKLAVPIAAAMLAL 438
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
44-190 |
2.91e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 39.43 E-value: 2.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 44 QHNPRATEATTKYFLTQAAASATILFASTINAWQTGTWDISQLTNQPSC--------------ILLTMALAMKLGLTPMH 109
Cdd:PRK12649 155 RHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELienikghplflitlILIFIGAAAKSAQGPFY 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 110 FWLPEVLQGTTLKTALIITTWQKLAPATL---LYLVYHSTNPTILLT--MGIMSTIVGGWGGLNQTQMRKIMAFSSIANL 184
Cdd:PRK12649 235 IWLPNAMEAPTPVSAFLHSATMVKAGVYLvarIHPIFSGTEAWFILVsgTGMITMVLAGFLAFRQTDIKAILAYSTISQL 314
|
....*.
gi 564732281 185 GWMVTI 190
Cdd:PRK12649 315 AYLMTM 320
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
149-218 |
3.38e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 39.06 E-value: 3.38e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 149 TILLTMGIMSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINpnimLLNLALYILMTTPLFLALMF 218
Cdd:MTH00151 241 SFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLG----MPSLALFHLYTHALFKALLF 306
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
27-294 |
3.44e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 39.03 E-value: 3.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 27 WIGLELNTLAIIPIIAKQHNPRATEATTKYFLTQAAASATILFASTINAWQ-TGTWDI---SQLTNQPSCILLTMALAM- 101
Cdd:PRK06589 142 FVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTkTGNLDFvsgGLFSKNQSIILLLMFIYGi 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 102 -KLGLTPMHFWLPEVLQGTT----LKTALIITTWQKLAPATLLYLVYHSTNPTILLTMG-------IMSTIVGGWGGLNQ 169
Cdd:PRK06589 222 aKTAIFPVHSWLPAAMVAHYpvsaLLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAEFnwlifipIVSIFYSSLKALKT 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 170 TQMRKIMAFSSIANLGWMVTILTINPNIMLLNLALYILMTTPLFLALMFTA--------SKTIKDLTTTWTISPPITAML 241
Cdd:PRK06589 302 DNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMgsiyslkkEDQVDKLHGTSKSFPLISFII 381
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 564732281 242 LMLLMSMGGLPPLTGFIPKWLILQELTTHNLTATATVMAL-----SALLSLFFYLRLS 294
Cdd:PRK06589 382 SISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLvviasSILSALYLLKILS 439
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
2-194 |
3.71e-03 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 39.14 E-value: 3.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 2 MYSLIMSSVatgtIITMTSYHWLLAWIGLELNTLAIIPIIAKQHNPRATEATTKYFLTQAAASA-----TILFASTINAW 76
Cdd:PRK06458 113 MYQLFLFTM----LLALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAfalfgTILVYANAATV 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 77 QTGTWDISQLTN--------QPSCILLTMALAM-----KLGLTPMHFWLPE-----------VLQGTTLKTAL-IITTWQ 131
Cdd:PRK06458 189 MGDGEMAILWTEllkhasllDPTLMKLAFVFLLigfgtKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALyAVLRYY 268
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 564732281 132 KLAPATLLYLvyhsTNPTILLTMGIMSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTIN 194
Cdd:PRK06458 269 ILIDAAIGSD----FPGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIG 327
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
2-296 |
5.60e-03 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 38.59 E-value: 5.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 2 MYSLIMSSVATGTIITMTSYHwllAWIGLELNTLAIIPIIAKQHNPRATEATTKYFLTQAAASATILFASTINAWQTGTW 81
Cdd:PRK08377 112 MLFLLLMLGATGMIATGDIFN---LFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 82 DISQLTNQPSCI----------LLTMALAMKLGLTPMHFWLPEVLQGT----TLKTALIITTWQKLAPATLLYLVYHSTN 147
Cdd:PRK08377 189 NMAHIAQLAGTIdptvaqvglaLLIFGLAVEAELFPLNAWAPDAYQAAphpiTVMFSAFVVKAGLYAMARILYLMQNANG 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 148 PT----ILLTMGIMSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINPNIMlLNLALYILMTTPLFLALMFTA--- 220
Cdd:PRK08377 269 WSsvlkLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAG-VDAGVFHMINHAIVKALLFLAvgy 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 221 ------SKTIKDLTTTWTISPPITAMLLMLLMSMGGLPPLTGFIPKWLILQELTTHNLTATATVMALSALLSLFFYLRLS 294
Cdd:PRK08377 348 vgitlgGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRLI 427
|
..
gi 564732281 295 YT 296
Cdd:PRK08377 428 HT 429
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
16-126 |
9.23e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 37.76 E-value: 9.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 16 ITMTSYHWLL---AW--IGLELNTLaiipIIAKQHNPRATEATTKYFLTQAAASATILFASTINAWQTGTWDISQLTN-- 88
Cdd:PRK08168 115 LLVLSDHLLVliaAWaaISLALHRL----LCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAhl 190
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 564732281 89 ---------QPSCILLTMALAMKLGLTPMHFWLPEVLQGTTLKTALI 126
Cdd:PRK08168 191 aaqgaspslQAAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALL 237
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
68-264 |
9.43e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 37.98 E-value: 9.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 68 LFASTINAWQ-TGTWDISQLTNQ-----------PSCILLTMALAMKLGLTPMHFWLPEVLQGTTLKTALiittwqkLAP 135
Cdd:PRK12647 162 LLAGLILLGNvTGTYSLSELLASgdvirehplylAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAY-------LHS 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564732281 136 ATL----LYLVYHsTNP---------TILLTMGIMSTIVGGWGGLNQTQMRKIMAFSSIANLGWMVTILTINPNIMLLNL 202
Cdd:PRK12647 235 ATMvkagIYLLAR-LNPvlggtplwqTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAA 313
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 564732281 203 ALYILMTTpLFLALMFTASKTI------KDLTTT---WTISPPITAMLLMLLMSMGGLPPLTGFIPKWLIL 264
Cdd:PRK12647 314 VLFLVAHS-LYKGALFMVAGIIdhetgtRDITKLgglRRAMPITAAAALLAALSMAGLPPLFGFLAKELIY 383
|
|
| |
