|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
5.56e-168 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 471.61 E-value: 5.56e-168
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 1 MNPQAKLVFVTSLLLGTTITISSSHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWQ 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 81 TGQWDITQLTCPTSCLILTSAIAMKLGLVPFHFWFPEVLQGTSLTTGLLLSTAMKFPPMTLFFMTSQALNPTLLITMALL 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYILMTTAVFLTLNSIKTLKLSTLMTTWTKTPAL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 241 SATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIALLSLLSLFFYLRLAYCATITLPPHTTNHMKQWYTNKP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 602219779 321 TSALVAILATMSITLLPISPMILTIV 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
7.58e-139 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 397.64 E-value: 7.58e-139
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 1 MNPQAKLVFVTSLLLGTTITISSSHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWQ 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 81 TGQWDITQLTCPTSCLILTSAIAMKLGLVPFHFWFPEVLQGTSLTTGLLLSTAMKFPPMTLFFMTSQAlNPTLLITMALL 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYILMTTAVFLTLNSIKTLKLSTLMTTWTKTPAL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 241 SATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIALLSLLSLFFYLRLAYCATITLPPHTTNHMKQW-YTNK 319
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWrLPST 319
|
330 340
....*....|....*....|....*..
gi 602219779 320 PTSALVAILATMSITLLPISPMILTIV 346
Cdd:MTH00135 320 QLTLPLAISTTATLMLLPLTPAILALL 346
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
3.57e-135 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 388.12 E-value: 3.57e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 1 MNPQAKLVFVTSLLLGTTITISSSHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWQ 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 81 TGQWDITQLTCPTSCLILTSAIAMKLGLVPFHFWFPEVLQGTSLTTGLLLSTAMKFPPMTLFFMTSQALNPTLLITMALL 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYILMTTAVFLTLNSIKTLKLSTLMTTWTKTPAL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 241 SATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIALLSLLSLFFYLRLAYCATITLPPHTTNHMKQWYTNKP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*
gi 602219779 321 TSALVAILATMSITLLPISPMILTI 345
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNL 345
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
4.39e-117 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 342.21 E-value: 4.39e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 1 MNPQAKLVFVTSLLLGTTITISSSHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWQ 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 81 TGQWDITQLTCPTSCLILTSAIAMKLGLVPFHFWFPEVLQGTSLTTGLLLSTAMKFPPMTLFFMTSQALNPTLLITMALL 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYILMTTAVFLTLNSIKTLKLSTLMTTWTKTPAL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 241 SATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIALLSLLSLFFYLRLAYCATITLPPhTTNHMK-QW-YTN 318
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFP-STNNMKmKWqFEN 319
|
330 340
....*....|....*....|....*..
gi 602219779 319 KPTSALVAILATMSITLLPISPMILTI 345
Cdd:MTH00105 320 TKPMTLLPTLIILSTMLLPLTPMLSIL 346
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
1.08e-97 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 293.03 E-value: 1.08e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 1 MNPQAKLVFVTSLLLGTTITISSSHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWQ 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 81 TGQWDITQLTCPTSCLILTSAIAMKLGLVPFHFWFPEVLQGTSLTTGLLLSTAMKFPPMTLFFMTSQALNPTLLITMALL 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYILMTTAVFLTLNSIKTLKLSTLMTTWTKTPAL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 241 SATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIALLSLLSLFFYLRLAYCATITLPPHTTNHMKQWYTNKP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*
gi 602219779 321 TSALVAILATMSITLLPISPMILTI 345
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFL 345
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-267 |
1.94e-84 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 259.09 E-value: 1.94e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 1 MNPQAKLVFVTSLLLGTTITISSSHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWQ 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 81 TGQWDITQLTCPTSCLILTSAIAMKLGLVPFHFWFPEVLQGTSLTTGLLLSTAMKFPPMTLFFMTSQALNPTLLITMALL 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYILMTTAVFLTLNSIKTLKLSTLMTTWTKTPAL 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260
....*....|....*....|....*..
gi 602219779 241 SATLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISL 267
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
2.53e-60 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 196.58 E-value: 2.53e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 1 MNPQAKLVFVTSLLLGTTITISSSHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWq 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 81 tgqwdITQLTCPTSCLILTSAIAMKLGLVPFHFWFPEVLQGTSLTTGLLLSTAMKFPPMTLFFMTsqaLNPTLLITMALL 160
Cdd:MTH00160 81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYILMTTAVFLTLNSIKTLKLSTLMTTWTKTPAL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 241 SATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIALLSLLSLFFYLRLAYCATITLppHTTNHMKQWYTNKP 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLN--YNKNKWNLKKKKNK 310
|
330 340
....*....|....*....|....*
gi 602219779 321 TSALVAILATMSITLLPISPMILTI 345
Cdd:MTH00160 311 FSLILNFLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
5-275 |
2.90e-50 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 170.45 E-value: 2.90e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 5 AKLVFVTSLLLGTTITISSSHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWQTGQW 84
Cdd:MTH00144 5 SNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 85 DITqltcptscLILTSAIAMKLGLVPFHFWFPEVLQGTSLTTGLLLSTAMKFPPmtLFFMTSQALNPTLLIT---MALLS 161
Cdd:MTH00144 85 FSM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAP--LFLLSNFLDLYWLAYLlcvISVLS 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 162 AALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYILMTTAVFLTLNSiKTLKLSTLMTTWTKTPALS 241
Cdd:MTH00144 155 ALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWS-GDSGSMKDLGSLKPSYKTG 233
|
250 260 270
....*....|....*....|....*....|....
gi 602219779 242 ATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEM 275
Cdd:MTH00144 234 LSIISLLLSLGGLPPFLGFCSKLLVLISSMESSP 267
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
7-275 |
1.27e-47 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 163.80 E-value: 1.27e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 7 LVFVTSLLLGTTITISSSHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLILFSSmtnawqTGQWDI 86
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 87 TQLTCPTSCLILTSAIAMKLGLVPFHFWFPEVLQGTSLTTGLLLSTAMKFPPMTLFFMTSQALNPTLLITMALLSAALGG 166
Cdd:MTH00011 83 PSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 167 WMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYILMTTAVFLTLNSIKTLKLSTLMTTWTKTPALSATLML 246
Cdd:MTH00011 163 LGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFI 242
|
250 260
....*....|....*....|....*....
gi 602219779 247 TLLSLAGLPPLTGFLPKWLIIQELTKQEM 275
Cdd:MTH00011 243 MLLSLGGLPPFTGFMPKLMAIETLTSNSM 271
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
8-342 |
4.75e-41 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 145.97 E-value: 4.75e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 8 VFVTSLLLGTTITISSSHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWQTgqwdit 87
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL------ 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 88 qLTCPTSCLILTSAIAMKLGLVPFHFWFPEVLQGTSLTTGLLLSTAMKFPPmtLFFMTSQALNPTLLITMALLSAALGGW 167
Cdd:MTH00197 76 -YLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGGI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 168 MGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYILMTTAVFLTLNSIKTLKLSTLMTTWTKTPALSATLMLT 247
Cdd:MTH00197 153 GGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLS 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 248 LLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIALLSLLSLFFYLRLAYcatiTLPPHTTNHMKQWYTNKPTSALVAI 327
Cdd:MTH00197 233 FLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAY----KSLILSNWMINFLMKINLLYSGLFI 308
|
330
....*....|....*
gi 602219779 328 LATMSITLLPISPMI 342
Cdd:MTH00197 309 LLMMMLPLLMIFTMI 323
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-270 |
5.03e-30 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 119.07 E-value: 5.03e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 14 LLGTTITISSSHWIMAWTGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASTLILF--------------SSMTNA 78
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgisllygatgslnlAGIAAA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 79 WQTGQWDITQLTcpTSCLILTSAIAMKLGLVPFHFWFPEVLQGTSLTTGLLLSTAMK----FPPMTLFFMTSQALNP--- 151
Cdd:COG1007 192 LAAGGANSPLLL--LGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaafAALLRLLVEAFPGLAAdwq 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 152 TLLITMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLAL--LNFYL--YILMTTAVFLTLNSIK---- 223
Cdd:COG1007 270 LLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNLGAFAVILLLSrkgg 349
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 602219779 224 -TLKLSTLMTTWTKTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:COG1007 350 eAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAA 397
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-267 |
1.82e-29 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 115.90 E-value: 1.82e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 13 LLLGTTITISSSHWIMAWTGLEINTLAILPLI-SKSHHPRAIEAATKYFLVQAAASTLILFS-------------SMTNA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 79 WQTGQWDITQLTCPTSCLILTSAIAMKLGLVPFHFWFPEVLQGTSLTTGLLLSTAMKFPPMTLFFmtSQALNPTLLITMA 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILV--SIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 159 LLSAALGGWMGLNQTQTRKILAFSSISHLGWMAIII----IYSPKLALLNFYLYILMTTAVFLTLNSIKTLK--LSTLMT 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIeigsFESIQASLVYLFIYIIMSICVFSIILALNVYKnlIIEFSG 239
|
250 260 270
....*....|....*....|....*....|....*
gi 602219779 233 TWTKTPALSATLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLIL 274
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
4.39e-27 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 108.17 E-value: 4.39e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 23 SSHWIMAWTGLEINTLAILPLI-SKSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWQTGQWDITQL-----------T 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 91 CPTSCLILTSAIAMKLGLVPFHFWFPEVLQGTSLTTGLLL-STAMKFPP-----MTLFFMTSQALNPTLLITMALLSAAL 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLaATLVKAGGyglirRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 165 GGWMGLNQTQTRKILAFSSISHLGWMAIII----IYSPKLALLNFYLYILMTTAVFLTLNSI-----KTLKLSTLMTTWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCAGSViyrrvHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 602219779 236 KTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-267 |
7.55e-26 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 107.41 E-value: 7.55e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 13 LLLGTTITISSSHWIMAWTGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWQTGQWDI----T 87
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 88 QLTCPTSCLILTSAIAMKLGLVPFHFWFPEVLQGTSLTTGLLLSTAmkfPPMTLFFMTSQ-ALNPTLLITMALLSAALGG 166
Cdd:MTH00199 186 ILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATV---PKIGVFSILVQiGPVTNVVLICAVLSIIYGA 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 167 WMGLNQTQTRKILAFSSISHLGW----MAIIIIYSPKLALLNFYLYILMTTAVFLTLNSIKTLK--LSTLMTTWTKTPAL 240
Cdd:MTH00199 263 IGALNQTKIKRLLAYSGIGHMGFilfgVAIGSFESIQASLIYMIIYVIMSICSFSIILSLKLTKglIVEVSGLSRKNPVI 342
|
250 260
....*....|....*....|....*..
gi 602219779 241 SATLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00199 343 ALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-281 |
6.24e-24 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 101.82 E-value: 6.24e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 14 LLGTTITISSSHWIMAWTGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASTLIL--------------FSSMTNA 78
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLygmsllygatgslsFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 79 WQTGQWDITQLTcpTSCLILTSAIAMKLGLVPFHFWFPEVLQGTSLTTGLLLSTAMK---FPPMT-LFFMTSQALNPT-- 152
Cdd:PRK05777 193 LADGSGNSLLLL--FGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAVLLrLLVVAFGGLSEDwq 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 153 -LLITMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLAL--LNFYL--YILMTTAVF--LTLNSIKTL 225
Cdd:PRK05777 271 qVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYLlaYLFMTLGAFgvISLLRRKGG 350
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 226 KLSTLmTTWT----KTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATI 281
Cdd:PRK05777 351 EAESI-SDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVI 409
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-275 |
2.89e-23 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 100.02 E-value: 2.89e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 14 LLGTTITISSSHWIMAWTGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWQTGQWDITQLT-- 90
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLlf 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 91 ----------CPTSCLILTSAIAMKLGLVPFHFWFPEVLQGTSLTTGLLLSTAMK----FPPMTLFFMTSQALNPTLLIT 156
Cdd:TIGR01770 192 lsngmlnislLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKiaifAVFLRLFLYILFGFSEAWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 157 MALLSAA---LGGWMGLNQTQTRKILAFSSISHLGW--MAIIIIYSPKLALLNFYL--YILMTTAVFLTLNSIKTLK--- 226
Cdd:TIGR01770 272 LAIIAFLsmlIGNFGALAQKKVKRLLAYSSISHVGYilIGLLAGTLEGIKAVLFYIfiYALMSLGAFGVLSLLRSYKdew 351
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 602219779 227 ---LSTLMTTWTKTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEM 275
Cdd:TIGR01770 352 ieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGL 403
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-283 |
5.21e-22 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 95.98 E-value: 5.21e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 13 LLLGTTITISSSHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWQTGQWDITQLTC- 91
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAr 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 92 ---------PTSCLILTSAIAMKLGLVPFHFWFPEVLQGTSLTTGLLLSTAM---------KFppMTLFFMTSQALNP-T 152
Cdd:COG0651 196 laeldpgllLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLtkvgvyailRV--LTLLFGADPALFLgT 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 153 LLITMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYI----LMTTAVFLTLNSI----KT 224
Cdd:COG0651 274 LLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLlnhaLAKALLFLAAGAIeratGT 353
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 602219779 225 LKLSTLMTTWTKTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIA 283
Cdd:COG0651 354 RDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLL 412
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
3-267 |
6.57e-19 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 87.61 E-value: 6.57e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 3 PQAKLVFVTSLLLGTTITISSSHWIMAWTGLEINTLAILPLISKSHHPRAI---------EAATKYFLVQAAASTLILFS 73
Cdd:MTH00198 187 PRSGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFG 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 74 SMTNAWQTGQ----WDITQLTCPTS----------CLILTSAIAMKLGLVPFHFWFPEVLQGTSLTTGLLLSTAMKFPPM 139
Cdd:MTH00198 267 CALYFGFTGNegmlGTILSATLETTnielrqgslgYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVY 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 140 TLffMTSQALNPTLLITMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYILM-TTAVFLT 218
Cdd:MTH00198 347 IL--LTSLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTyLVSALAS 424
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 602219779 219 LNSIKTL------------------------KLSTLMTTWTKTPALSATLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00198 425 FTVICTLeefgtrtptsrqrdgsfgnynlvrRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFIL 497
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-263 |
9.28e-16 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 78.12 E-value: 9.28e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 51 RAIEAATKYFLVQAAASTLIL--FSSM--TNAWQTGQWDI------TQLTCPTSCLI----LTSAIAMKLGLVPFHFWFP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVygFSWLygLSGGEIELQEIvnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 117 EVLQG-----------TSLTTGLLLSTAMkfppMTLFFMTSQALNPTLLITMALLSAALGGWMGLNQTQTRKILAFSSIS 185
Cdd:CHL00049 239 DVYEGsptpvvaflsvTSKVAASALATRI----FDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIG 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 186 HLGWMAIIII-------YSPKLALLNFYLYILMTTAVFLTLNSIKT--LKLSTLMTTWTKTPALSATLMLTLLSLAGLPP 256
Cdd:CHL00049 315 QIGYVIIGIIvgdsndgYASMITYMLFYIFMNLGTFACIVLFGLRTgtDNIRDYAGLYTKDPFLALSLALCLLSLGGIPP 394
|
....*..
gi 602219779 257 LTGFLPK 263
Cdd:CHL00049 395 LAGFFGK 401
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
5.64e-14 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 72.78 E-value: 5.64e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 50 PRAIEAATKYFLVQAAASTLILF-SSMTNAWQTGQwdiTQL--------TCPTSCLILT-----SAIAMKLGLVPFHFWF 115
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGS---TQLsaialaliTSPSLGLALAlvfviAGIAFKISAVPFHQWT 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 116 PEVLQGTSLTTGLLLST-------AMKFPPMTLFFMTSQALNPTLLITMALLSAALGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:PRK02504 234 PDVYEGSPTPVVAFLSVgskaagfALAIRLLVTAFPSFDEQWKLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAG 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 189 WMAIIIIYSPK--LALLNFYL--YILMTTAVF--LTLNSIKT--LKLSTLMTTWTKTPALSATLMLTLLSLAGLPPLTGF 260
Cdd:PRK02504 314 FVMIGLVAGTEagYASMVFYLlaYLFMNLGAFacVILFSLRTgtDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGF 393
|
...
gi 602219779 261 LPK 263
Cdd:PRK02504 394 FGK 396
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-283 |
5.42e-12 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 66.64 E-value: 5.42e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 49 HPRAIEAATKYFLVQAAASTLILFSSMTNAWQTGQW-----DITQLTCPTS-----CLILTSAIAMKLGLVPFHFWFPEV 118
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfdiaELAAAPLPLTaqlllFLAFFIAFAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 119 LQ-----GTSLTTGLLLSTA----MKFPpMTLFFMTSQALNPtLLITMALLSAALGGWMGLNQTQTRKILAFSSISHLGW 189
Cdd:COG1008 236 HVeaptaGSVLLAGVLLKMGgyglLRFA-LPLFPEASAYFAP-LLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGF 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 190 MAIIIIYSPKLALLNFYLYI----LMTTAVFLTLNSI----KTLKLSTLMTTWTKTPALSATLMLTLLSLAGLPPLTGFL 261
Cdd:COG1008 314 VLLGIFALNPLGLQGAVLQMvshgLITAALFLLVGVLydrtHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFV 393
|
250 260
....*....|....*....|..
gi 602219779 262 PKWLIIQELTKQemAPAATIIA 283
Cdd:COG1008 394 GEFLVLLGAFQV--NPWLAILA 413
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-336 |
7.84e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 66.06 E-value: 7.84e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 33 LEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLILFS-SMTNAwQTGQWDITQL--------TCPTSCLILTSAIA 103
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGvGLLYG-VTGTLNMADLagalaenpTVVTAFGFVLLALA 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 104 MKLGLVPFHFWFPEVLQGTSLTTGLLLS-TAMKFPPMTLF----------FMTSQALNpTLLITMALLSAALGGWMGLNQ 172
Cdd:PRK08375 214 LKAAVFPLHTWLPRAYPAAPPVVTALLSgLVTKVAVYALIriyftvfggdFRFALGLG-WLLAVLALLSMLVGSLAALGQ 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 173 TQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYI----LMTTAVFLTLNSI----KTLKLSTLMTTWTKTPALSATL 244
Cdd:PRK08375 293 DDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLlhhaLMKGALFLAAGAIevtyGTRRLSELSGLGRRMPLTAAAF 372
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 245 MLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIALLSLLSLFFYLRLAYCATITLPPhttNHMKQWYTNKPTSAL 324
Cdd:PRK08375 373 AVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPP---PGSEAPKQEAPLGML 449
|
330
....*....|..
gi 602219779 325 VAILATMSITLL 336
Cdd:PRK08375 450 APSLALALLSLL 461
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
2.90e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 64.35 E-value: 2.90e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 33 LEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASTLILFS---------SMTNAWQTGQWDITQLTCPTSCL-ILTSA 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGiallygqygTLNMAYLAVKMSENPTVVAKIALaLFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 102 IAMKLGLVPFHFWFPEVLQG--TSLTTGLLLSTAMKFPPM--TLFFMTSQALNPT----LLITMALLSAALGGWMGLNQT 173
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYPAapSSISAMLLVIKQAGLYALarVLFSIYGPAINLAtvgwVIIILGCLTMFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 174 QTRKILAFSSISHLGWM------AIIIIYSPKL----------ALLNFYLYILMTTAVFLT----LNSIKTLKLSTLMTT 233
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMllglgvGLAALGDPAMasygeialagGIYHIVNHALYKALLFLTagavIYETGTRNLNELGGL 389
|
250 260 270
....*....|....*....|....*....|...
gi 602219779 234 WTKTPALSATLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 390 ARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-268 |
5.24e-11 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 63.42 E-value: 5.24e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 50 PRAIEAATKYFLVQAAASTLILFSSMTNAWQTGQW----DITQLTCPTSC-----LILTSAIAMKLGLVPFHFWFPEV-- 118
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTfdllELLNLPLPFGVqtwlfLAFFIAFAVKVPLFPLHTWLPDAhv 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 119 ---LQGTSLTTGLLLSTA----MKFpPMTLFFMTSQALNPtLLITMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMA 191
Cdd:TIGR01972 232 eapTAGSVILAGVLLKMGtygfLRF-NLPLFPDASLYFAP-VLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVL 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 192 IIIIYSPKLALLNFYLYI----LMTTAVFLTLNSI----KTLKLSTLMTTWTKTPALSATLMLTLLSLAGLPPLTGFLPK 263
Cdd:TIGR01972 310 LGIFSFNELGISGAVFQMishgLITAALFLLVGVLyeraHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGE 389
|
....*
gi 602219779 264 WLIIQ 268
Cdd:TIGR01972 390 FLILL 394
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
96-263 |
3.60e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 61.48 E-value: 3.60e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 96 LILTSAIAmKLGLVPFHFWFPEVLQGTSLTTGLLLSTAM---------KFPPMtlfFMTSQALNPTLlITMALLSAALGG 166
Cdd:PRK12644 208 LILVGALS-KSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPG---FADVPVWRPTV-LVLGLATMLLGG 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 167 WMGLNQTQTRKILAFSSISHLGWMAIII-IYSPKLALLNFYLYI---LMTTAVFLTLNSIK----TLKLSTLMTTWTKTP 238
Cdd:PRK12644 283 WRALRQHDLKLILAYGTVSQLGFLTVLVgIGTRDAALAGLAMLLahaLFKAALFLVVGIIDhstgTRDIRKLSGLGRRQP 362
|
170 180
....*....|....*....|....*
gi 602219779 239 ALSATLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 363 VLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
2-275 |
1.75e-09 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 58.85 E-value: 1.75e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 2 NPQAKLVFVTSLLLGTTITISSSHWIMAWTGLEINTLAILPLISKSHHpRAIEAATKYFLVQAAASTLILFSSMTNAWQT 81
Cdd:PRK08668 96 NDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKT 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 82 GQWDITQ----LTCPTS-------CLILTSAIAMKLGLVPFHFWFPE-----------VLQGTSLTTG---LLLSTAMkF 136
Cdd:PRK08668 175 GTFDFADisqgLINDTStgfalivFLFLLAFGVAKAGIFPLHVWAPDayseapqsfsaVLSGQLSKLGaygFLLVLYV-L 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 137 PPMTLF-----FMTSQALNpTLLITMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKL----ALLNFYL 207
Cdd:PRK08668 254 PGTKLFsefgtYRGVPLFN-YILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLgfagGLFHVFN 332
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 602219779 208 YILMTTAVFLTLNSI----KTLKLSTLMTTWTKTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEM 275
Cdd:PRK08668 333 HALFKGLFFLIFAAViyrtGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGM 404
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
29-263 |
7.41e-09 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 57.36 E-value: 7.41e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 29 AWtglEINTLAILPLISKSHhPRAIEAATKYFLVQAAASTLILFSSMTNAWQTGQWDI------------TQLTCPTSCL 96
Cdd:PRK12650 138 AW---ELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLsgilhsdvwaekPGLTTVVAVL 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 97 ILTSAIAmKLGLVPFHFWFPEVLQGTSLTTGLLLSTAMKFPPMTLFFMTSQAL--NPT---LLITMALLSAALGGWMGLN 171
Cdd:PRK12650 214 IAVAAFT-KSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhdVAVwnwLLIIVGMITALMGAVFAVQ 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 172 QTQTRKILAFSSISHLGWM-AIIIIYSP---KLALLNFYLYILMTTAVFLTLNSIK----TLKLSTLMTTWTKTPALSAT 243
Cdd:PRK12650 293 KTDLKKLTAYSTVSQLGWIvATIGVGTPfalTAAVVHTLAHALFKSSLFMLIGVVDhqagTRDIRRLGSLWRRMPFTFVS 372
|
250 260
....*....|....*....|
gi 602219779 244 LMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12650 373 VTIAALSMAAVPPLFGFVSK 392
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-283 |
1.12e-08 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 56.31 E-value: 1.12e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 48 HHPRAIEAATKYFLVQAAASTLILFSSMTNAWQTGQWDITQL-----TCPTSCLILTSAIAM------KLGLVPFHFWFP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELlaaapTILSSPLLTLILLLLllgafgKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 117 EVLQGTSLTTGLLLSTAM---------KFPPmtLFFMTSQALnpTLLITMALLSAALGGWMGLNQTQTRKILAFSSISHL 187
Cdd:COG1009 236 DAMEGPTPVSALLHAATMvkagvyllaRLSP--LFALSPVWL--TVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQL 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 188 GWMAIIIIYSPKLALLNFylyiLMTTAVF---LTLNS---IKTL------KLSTLmttWTKTPALSATLMLTLLSLAGLP 255
Cdd:COG1009 312 GYMFLALGVGAYVAALFH----LLTHAFFkalLFLGAgsvIHATgtrdirKMGGL---RKKMPITAITFLIGALSLAGIP 384
|
250 260
....*....|....*....|....*....
gi 602219779 256 PLTGFLPKWLIIQE-LTKQEMAPAATIIA 283
Cdd:COG1009 385 PFAGFFSKEAILEAaLEAGGLGPLLLAVA 413
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
20-268 |
1.87e-08 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 55.71 E-value: 1.87e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 20 TISSSHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLV------QAAASTLILFSSMTNAWQTGQWDI--TQLTC 91
Cdd:PRK06458 124 ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIIcsvgvaFALFGTILVYANAATVMGDGEMAIlwTELLK 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 92 PTSCL---ILTSAIAM-------KLGLVPFHFWFP----EVLQGTS-LTTGLLLSTAMkFPPMTLFFMTSQALNP----T 152
Cdd:PRK06458 204 HASLLdptLMKLAFVFlligfgtKVGLFPMHAWLPdahsEAPSPVSaLLSGVLLNVAL-YAVLRYYILIDAAIGSdfpgR 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 153 LLITMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYILM----TTAVFLT----LNSIKT 224
Cdd:PRK06458 283 LLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNhsltKSAIFFAsgnvLQKYGT 362
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 602219779 225 LKLSTLMTTWTKTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK06458 363 RDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILT 406
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-267 |
2.97e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 55.13 E-value: 2.97e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 33 LEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLILFS-----------SMTNAWQTGQWDITQLTCPTSCLILTSA 101
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGigflyaitgtlNMGDMFLIIQDLPTNRAIQIGVLFIMVG 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 102 IAMKLGLVPFHFWFPEV-----------LQGTSLTTGLLLSTAMKFPPMTLFFMTSQALNPTLLITMALLSAALGGWMGL 170
Cdd:PRK12662 219 LFIKAALFPFHKWLIQAyseapsfisvfFSGTSTKVMIYLIIRIVYDVFKANFVFTTLPFNNVFMILAALAIVFGSVLAI 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 171 NQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYI----LMTTAVFLTLNSIK----TLKLSTLMTTWTKTPALSA 242
Cdd:PRK12662 299 LSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIvnhsIVKSALFMVSGSISyhfgTTKLEDCLNLWKSMPKITL 378
|
250 260
....*....|....*....|....*
gi 602219779 243 TLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK12662 379 AFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-267 |
3.01e-07 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 51.74 E-value: 3.01e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 50 PRAIEAATKYFLVQAAASTLILFSSMT----NAWQTGQWDITQL---TCPTSCLILT-----SAIAMKLGLVPFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIYlvvvYYNATGTFDIADLlnlPLPPGVQYWLflaffIAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 118 VLQ-----GTSLTTGLLLSTA----MKFPpMTLFFMTSQALNPtLLITMALLSAALGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:PRK05846 237 AHVqaptaGSVLLAGILLKMGayglLRFS-LPLFPDASHEFAP-IIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMG 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 189 WMAIIIIYSPKLALLNFYLYI----LMTTAVFLTLNSI----KTLKLSTLMTTWTKTPALSATLMLTLLSLAGLPPLTGF 260
Cdd:PRK05846 315 FVTLGIFAGNQLGIQGAIFQMishgLSSAALFLLVGVLydrlHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGF 394
|
....*..
gi 602219779 261 LPKWLII 267
Cdd:PRK05846 395 VGEFLIL 401
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
109-283 |
7.34e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 51.07 E-value: 7.34e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 109 VPFHFWFPEVLQGTSLTTGLLLSTAM---------KFPPMtlffMTSQALNPTLLITMALLSAALGGWMGLNQTQTRKIL 179
Cdd:PRK12647 212 FPFHFWLPNAMEAPTPVSAYLHSATMvkagiyllaRLNPV----LGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLIL 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 180 AFSSISHLGWMAIIIIYSPKLALLNFYLYI----LMTTAVFLTLNSIK----TLKLSTLMTTWTKTPALSATLMLTLLSL 251
Cdd:PRK12647 288 AYSTVSALGTLVMLLGLGSELAIKAAVLFLvahsLYKGALFMVAGIIDhetgTRDITKLGGLRRAMPITAAAALLAALSM 367
|
170 180 190
....*....|....*....|....*....|..
gi 602219779 252 AGLPPLTGFLPKWLIIQELTKQEMAPAATIIA 283
Cdd:PRK12647 368 AGLPPLFGFLAKELIYEALLEAPLWSLILTVA 399
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
1.10e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 49.95 E-value: 1.10e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 33 LEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWQTGQWDITQLTC--PTSCLILTSAIAMKLGLVP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 111 FHFWFPEVLQGTSLTTGLLLSTAMK----FPPMTLFFMTSQALNPtlLITMALLSAALGGWMGLNQTQTRKILAFSSISH 186
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVkagvFPLVRCALDVPGLDLI--VRIFGVGTALLGVLFALLEKDLKRMLAFSTISQ 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 187 LGWmaiiIIYSPKLALLNFYLYILMTTAVFLTLNSIKTLKLSTLMTTWTKTPALSAtLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK07234 281 LGF----ILAAPLVGGLYALAHGLVKSTLFLCAGALPSRNFTELISQMLGIGKWIP-LTMASFSIAGFPLLAGFVSKVLT 355
|
....*
gi 602219779 267 IQELT 271
Cdd:PRK07234 356 LKNLL 360
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
53-268 |
1.25e-06 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 49.95 E-value: 1.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 53 IEAATKYFLVQAAASTLILFSSMTNAWQTGQWDITQL-----------TCPTSCLILTSAIAMKLGLVPFhFWFPEVLQG 121
Cdd:PRK12663 157 LRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIamrlndmgdtaTLTTIALLFLLAFGMKAALFPF-MWLPAAYHT 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 122 TSLTTGLLLSTAMK-------FPPMTLFFMTSQALNPTLLITMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAIii 194
Cdd:PRK12663 236 PNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILL-- 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 195 iyspKLALLN--------FYLY--ILMTTAVFLTLNSIKTL----KLSTLMTTWTKTPALSATLMLTLLSLAGLPPLTGF 260
Cdd:PRK12663 314 ----GLALGTpagingaiFYLVhdMVVKTALFLIAGSLVRLtgyrSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGF 389
|
....*...
gi 602219779 261 LPKWLIIQ 268
Cdd:PRK12663 390 WGKVLLVQ 397
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
59-270 |
2.49e-06 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 49.34 E-value: 2.49e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 59 YFLVQAAASTLILFSSMTNAW-QTGQWDITQLTCPT-----SCLILTSAIAMKLGLVPFHFWFPEVLQG-----TSLTTG 127
Cdd:PRK08667 166 FYFVMTQLSTVFLMLGIIVLFiQTGSFELSPLGASAgilslVFLLLFLGFGIKAGIIPFHKWLPYAHPAspsnvSALMSG 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 128 LLLSTAM-KFPPMTLFFMTSQALNPTLLITMALLSAALGGWMGLNQTQTRKILAFSSISHLG--------WMAIIIIYSP 198
Cdd:PRK08667 246 VMLKVAVyGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVYGLD 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 199 KLALLNF-------YLYILMTTAVFLTLNSI----KTLKLSTLMTTWTKTPALSATLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK08667 326 TLALLALggalfhsLNHALFKSLLFLTAGSVvhatGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLY 405
|
...
gi 602219779 268 QEL 270
Cdd:PRK08667 406 ESF 408
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-268 |
4.52e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 48.02 E-value: 4.52e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 103 AMKLGLVPFHFWFPE----------VLQGTSLTTGLLLSTAMKFppmTLFFMTSQALNPTLLITMALLSAALGGWMGLNQ 172
Cdd:PRK07691 220 ATKAGLFPLYFWLPGsyyappiaiaALFGALLTKVGVYAIARTF---TLFFSHDTSFTHYLILILALLTIIFGVIGAVAY 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 173 TQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLY----ILMTTAVFLTLNSIKTL-------KLSTLMTTWtktPALS 241
Cdd:PRK07691 297 FDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYlihdMIVKAALFLLIGIMIKItgttdlkKMGGLIKRY---PVLG 373
|
170 180
....*....|....*....|....*..
gi 602219779 242 ATLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK07691 374 WMFFIAALSLAGIPPLSGFYGKFFIVE 400
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-270 |
9.16e-06 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 47.06 E-value: 9.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 13 LLLGTTITISSSHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAA------STLILFSSMTNAWQTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 87 TQLTCPT----------SCLILTSAIAMKLGLVPFHFWFPEVLQGTSLTTGLLLSTAMKFPPMTLFFMTSQALNPT---- 152
Cdd:PRK08676 191 TELAAHAsllspsvlgaSFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSgaae 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 153 ----LLITMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYILMTTAVFLTL--------N 220
Cdd:PRK08676 271 qfsnVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLffsagilhR 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 602219779 221 SIKTLKLSTLMTTWTKTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK08676 351 QYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQL 400
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-268 |
9.37e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 47.33 E-value: 9.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 34 EINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWQTGQWDITQ-----LTCPTSCLILTSAIAMKLGL 108
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSPVIYGGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 109 V------PFHFWFPEVLQGTSLTTGLLLSTAMKFPPMTL-------FFMTSQ-ALNPTLLITMALLSAALGGWMGLNQTQ 174
Cdd:PRK06277 210 LygsglpPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALmlvifklFGGLSYfPSAQGVLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 175 TRKILAFSSISHLGWMAIIII----YSPKLALLNFYLYILMTTAVFLTLNSI----KTLKLSTLMTTWTKTPALSATLML 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLAlgtpLGIVAGIFHAINHVIYKSALFLGAGIVsyrtKTSNLRKLGGLLPVMPVVAFMVLC 369
|
250 260
....*....|....*....|..
gi 602219779 247 TLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLMLAQ 391
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-268 |
2.40e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 46.11 E-value: 2.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 96 LILTSAIAMKLGLVPFHFWFPEVLQG-----TSLTTGLLlsTAMKFPPM----TLFFmTSQALNpTLLITMALLSAALGG 166
Cdd:PRK12665 213 AVLLVAFGIKAAVFPLSFWLPDSYPTapapvTAVFAGLL--TKVGVYAIirthTLLF-PGGGLD-TLLMVVALLTMVVGI 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 167 WMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLY----ILMTTAVFLTLNSIK----TLKLSTLMTTWTKTP 238
Cdd:PRK12665 289 LGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYvahhITVQTTLFLVVGLIErqagSSSLRRLGGLAKASP 368
|
170 180 190
....*....|....*....|....*....|
gi 602219779 239 ALSATLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK12665 369 LLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-266 |
2.81e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 45.85 E-value: 2.81e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 55 AATKYFLVQAAASTLILFSSMTNAWQTG-------QWDITQLTCPTSCLILTS---AIAMKLGLVPFHFWFPEVLQGTS- 123
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGassfdyePLRSHTLPLSTQLLLLAPilvGFGIKIPLVPFHTWLPDAHVEASt 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 124 ----LTTGLLLSTA----MKFPpMTLFFMTSQALNPTLlITMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIII 195
Cdd:PRK06473 238 pvsvLLAGVLLKLGtyglLRFG-VGLFPEAWVYLAPWL-ATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 196 YSPKLALLNFY-----------LYILMTTAVFLTLNSIKTLKLSTLMTTWTKTPALSATLMLTLLSLAGLPPLTGFLPKW 264
Cdd:PRK06473 316 AATPLSILAAVfqmishglisaLLFLLVGVVYKKTGSRDVDVLRGLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEF 395
|
..
gi 602219779 265 LI 266
Cdd:PRK06473 396 LV 397
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
111-268 |
5.58e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 44.95 E-value: 5.58e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 111 FHFWFPEVLQGTSLTTGLL----LSTAMKFPPMTLFFMTSQALNPTLLITM-ALLSAALGGWMGLNQTQTRKILAFSSIS 185
Cdd:MTH00032 244 LHTWLPDAMEGPTPVSALIhaatMVTAGVFLMIRSFPLFEKAPLTLLIITIfGALTAFFAATVGLVQNDLKKVIAYSTCS 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 186 HLGWMAIIIIY--SPKLALLNFYLYILMTTAVFLTLNSI---------KTLKLSTLMTTwtkTPALSATLMLTLLSLAGL 254
Cdd:MTH00032 324 QLGYMVLIIGIegSHNVGLFHLVNHAFFKALLFLSAGSVihsttvdeqDMRKMGGLIHS---IPFTYTMMLIGSFSIMGL 400
|
170
....*....|....
gi 602219779 255 PPLTGFLPKWLIIQ 268
Cdd:MTH00032 401 PYLTGFYSKDLILE 414
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
295-340 |
8.83e-05 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 39.55 E-value: 8.83e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 602219779 295 RLAYCATITLPPHTTNHMKQWYTNKP-TSALVAILATMSITLLPISP 340
Cdd:pfam06444 5 RLSYSTTLTLFPNTNNSKMKWRFNSTkNTLLLPTLTTLSILLLPLTP 51
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-268 |
1.12e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 43.93 E-value: 1.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 55 AATKYFLVQAAASTLILFSSMTNAWQTGQWD------ITQ-LTCPTSCLILTSAI---AMKLGLVPFHFWFPEVLQGTSL 124
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSfdydaiSTQnLSLNTQLILLTGLLlgfGIKIPLVPLHTWLPDAYTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 125 TTGLLLSTAM---------KFPpMTLFFMTSQALNPTLLITMALlSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIII 195
Cdd:PRK07363 238 AVAILLGGVLaklgtygllRFG-LQLFPQTWSLVAPGLAIIGTI-SVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 196 YSPKLALLNFYLYIL---MTTAVFLTLNSIKTLKLST--------LMTTWTKTPALSATLMLTLLSLAGLPPLTGFLPKW 264
Cdd:PRK07363 316 AGTQLSLLGAVAQMIshgLILALLFHLVGIVERKVGTrdldvlngLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEF 395
|
....
gi 602219779 265 LIIQ 268
Cdd:PRK07363 396 IVFQ 399
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
15-270 |
3.32e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 42.47 E-value: 3.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 15 LGTTITISSSHWIM---AWTGLEINTLAILPLISKSHHPRAIeaatkyFLVQAAAST-LILFSSMTNAWQTGQWDITQLT 90
Cdd:PRK06459 83 LGMAIVLTSDNYLLflaGWEIMTIPSYVAIALTKKNKRPAFV------FMAFGELSTvLILAGFAWAFIISGTTNFSYLP 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 91 CPTSCLILTSAIAMKLGLVPFHF--WFPEVLQGTSLTTGLLLSTAMKFppMTLFFMTSQALNPT---------LLITMAL 159
Cdd:PRK06459 157 SPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTL--MGVYGILKMTILTQtipigyfglTILAIGA 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 160 LSAALGGWMGLNQTQTRKILAFSSISHLGWM-----AIIIIYSPKLALLNFYLYILMT---------TAVFLTLNSIKTL 225
Cdd:PRK06459 235 FSILFGALYAYVSENVKGLLAFSTIENNGAIlvalgLYMVTKQLITSIEHFSLITVILysfahsvakTGLFLSSGLQEKQ 314
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 602219779 226 KLSTLMTTWTKTPALSATLMLtlLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK06459 315 SITYSKKIRNRWIELGLTLLA--SSLSGLLPNIGGVASWLLLESL 357
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-278 |
9.08e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 40.97 E-value: 9.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 107 GLVPFHFWFPEVLQGTSLTTGLLLSTA-MKFPPMTLFFMTSQALNPTL-----LITMALLSAALGGWMGLNQTQTRKILA 180
Cdd:PRK08042 195 GIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 181 FSSISHLGWMAI--------IIIYSPKLALLNFY--LYILMT-----TAVFLTLNSI----KTLKLSTLMTTWTKTPALS 241
Cdd:PRK08042 275 YHTLENIGIILLglgagvtgIALEQPALIALGLVggLYHLLNhslfkSVLFLGAGSVwfrtGHRDIEKLGGIGKKMPVIS 354
|
170 180 190
....*....|....*....|....*....|....*..
gi 602219779 242 ATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPA 278
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGA 391
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-267 |
9.43e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 41.06 E-value: 9.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 101 AIAMKLGLVPFHFWFPEV-----LQGTSLTTGLLLSTA------MKFPPMTLffmTSQALNPTlLITMALLSAALGGWMG 169
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAhveapVAGSVLLAGILLKLGgyglvrLSWPILPL---GAQNLAPA-VIAMGIVGIVYGSFAT 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 170 LNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYIL---MTTAVFLTLNSIKTLKLSTLMTTWTK-----TPALS 241
Cdd:MTH00226 315 CRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLahgIVSSLLFILVTILYDRHHTRLIKYYRglsitMPIWG 394
|
170 180
....*....|....*....|....*.
gi 602219779 242 ATLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00226 395 TIMIVTSLANVAVPPSGNFIGEYLSI 420
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-268 |
1.16e-03 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 40.83 E-value: 1.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 95 CLILTSAIAMKLGLVPFHFWFPEVLQGTSLTTGLLLSTAMKFPPMTLFFMTSQALN--PTLLITMAL---LSAALGGWMG 169
Cdd:MTH00020 213 CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEqaPLALIIVTIvgsLTVFFAATVG 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 170 LNQTQTRKILAFSSISHLGWMAIII-IYSPKLALLNFYLYILMTTAVFLTLNS-IKTLKLSTLMTtwtKTPALSATLMLT 247
Cdd:MTH00020 293 LVQNDLKKVIAYSTCSQLGYMVVACgLSHYSISLFHLMNHAFFKALLFLSAGSvIHALSDEQDMR---KMGGLISFLPLT 369
|
170 180
....*....|....*....|....*...
gi 602219779 248 L-------LSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00020 370 YiffligsLSLMGFPYLTGFYSKDLILE 397
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-283 |
1.22e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 40.57 E-value: 1.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 2 NPQAKLVFVTSLLLGTTITISSSHWIMaWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWQ- 80
Cdd:PRK06589 115 SSRFLFFFNLTILIGVLIALSSDLFTM-FVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTk 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 81 TGQWDITQ---LTCPTSCLILTSAIAM--KLGLVPFHFWFPEVLQG----TSLTTGLLLSTAMKFPPMTLFFMTSQALNP 151
Cdd:PRK06589 194 TGNLDFVSgglFSKNQSIILLLMFIYGiaKTAIFPVHSWLPAAMVAhypvSALLHAVIVVKTGLFCIYKILLYIFGLSYL 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 152 T-------LLITMALLSAALGGWMGLNQTQTRKILAFSSISHLGW--MAIIIIYSPKLALLNFYL--YILMTTAVFLTLN 220
Cdd:PRK06589 274 QrifaefnWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLalLSAFILTPKALGAAILHLvsHSFAKICLFYSMG 353
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 602219779 221 SIKTLK----LSTLMTTWTKTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIA 283
Cdd:PRK06589 354 SIYSLKkedqVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVM 420
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
110-272 |
1.78e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 40.12 E-value: 1.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 110 PFHFWFPEVLQGTSLTTGLLLSTAMKFPPMTLFFMTSQALNPT-----LLITMALLSAALGGWMGLNQTQTRKILAFSSI 184
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSnmyiyIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 185 SHLGW-MAII-----IIYSPKLALLNFY-------LYILMTTAVF---------LTLNSIKTLKLSTLMTTWTKTPALSA 242
Cdd:PRK12646 308 SQLGMiMAMVgigggYAQHQQDAIASIYvfvlfaaLFHLMNHAIFkcalfmgvgIIDHEAGTRDIRILSGMRQLFPKMNL 387
|
170 180 190
....*....|....*....|....*....|
gi 602219779 243 TLMLTLLSLAGLPPLTGFLPKWLIIQELTK 272
Cdd:PRK12646 388 VMTIAALSMAGVPFLNGFLSKEMFLDALTQ 417
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
142-268 |
2.04e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 39.75 E-value: 2.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 142 FFMTSQALNPTLLITmALLSAALGGWMGLNQTQTRKILAFSSISHLG-WMAIIIIYSPKLALLNFYLYILMTTAVFLTLN 220
Cdd:MTH00207 235 FLSSTYWFNPALLLT-ASLTMLMAGLSAMTECDMKKIIALSTLSQLGvMMASLGLGMPKLALFHLITHALFKALLFVCAG 313
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 602219779 221 SI-----KTLKLSTLMTTWTKTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00207 314 SLihshhHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILE 366
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
2.61e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 39.81 E-value: 2.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 48 HHPRAIEAATKYFLVQAAASTLILFSSMTNAWQTGQWDITQ---------------LTCPTSCLILTSAiAMKLGLVPFH 112
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATilqdselienikghpLFLITLILIFIGA-AAKSAQGPFY 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 113 FWFPEVLQGTSLTTGLLLSTAMKFPPMTLFFMTSQALNPT-----LLITMALLSAALGGWMGLNQTQTRKILAFSSISHL 187
Cdd:PRK12649 235 IWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQL 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 188 GWMAIIIIYS----PKLALLNFYLYILMTTAVFLTL--------NSIKTLKLSTLMTTWTKTPALSATLMLTLLSLAGLP 255
Cdd:PRK12649 315 AYLMTMYGYTtyhePGLGVAAATFHLLNHATFKACLflvagivaHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIP 394
|
....*...
gi 602219779 256 PLTGFLPK 263
Cdd:PRK12649 395 PLNGFLSK 402
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-194 |
9.12e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 37.70 E-value: 9.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 55 AATKYFLVQAAASTLILFSSMTNAWQTGQ--WDITQLT-----------CPTSCLIltsAIAMKLGLVPFHFWFPE---- 117
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGaksyplalellLYAGFLI---AFGVKLPIFPLHTWLPDahge 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 602219779 118 -------VLQGTSLTTG----------LLLSTAMKFPPmtlffmtsqalnptLLITMALLSAALGGWMGLNQTQTRKILA 180
Cdd:PRK12561 215 asapvsmILAGVLLKMGgyalirfnvqMLPDAHVYFAP--------------ALAILGVVNIIYGALNAFAQDNVKRRLA 280
|
170
....*....|....
gi 602219779 181 FSSISHLGWMAIII 194
Cdd:PRK12561 281 YSSVSHMGFVLLGI 294
|
|
| |
