|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.41e-163 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 460.44 E-value: 1.41e-163
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 1 MNPQANLITTTSLLLGTIITISSNHWMMAWAGLEINTLAILPLISKSHHPRAIEASTKYFLVQAAASTLLLFSSMTNAWF 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 81 TGQWDITQLTHPTSCTLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPTTLLFLTSSSLNPTLLSGMAIA 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 161 STALGGWMGLNQTQVRKILAFSSISHLGWMVIILIYNPKLTLLTFYLYSMMTAAIFLTLNTTNTLKLSSMMTAWTKIPPL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 241 ITTLMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRLAYCATITLPPNSTNHMKQWQIIKP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 649912437 321 VPTLTTALTTLSIMLLPLSPMILTTL 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
5.65e-130 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 375.30 E-value: 5.65e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 1 MNPQANLITTTSLLLGTIITISSNHWMMAWAGLEINTLAILPLISKSHHPRAIEASTKYFLVQAAASTLLLFSSMTNAWF 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 81 TGQWDITQLTHPTSCTLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPTTLLFLTSSSlNPTLLSGMAIA 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 161 STALGGWMGLNQTQVRKILAFSSISHLGWMVIILIYNPKLTLLTFYLYSMMTAAIFLTLNTTNTLKLSSMMTAWTKIPPL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 241 ITTLMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRLAYCATITLPPNSTNHMKQWQIIKP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*..
gi 649912437 321 VPTLTT-ALTTLSIMLLPLSPMILTTL 346
Cdd:MTH00135 320 QLTLPLaISTTATLMLLPLTPAILALL 346
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
4.52e-129 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 372.72 E-value: 4.52e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 1 MNPQANLITTTSLLLGTIITISSNHWMMAWAGLEINTLAILPLISKSHHPRAIEASTKYFLVQAAASTLLLFSSMTNAWF 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 81 TGQWDITQLTHPTSCTLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPTTLLFLTSSSLNPTLLSGMAIA 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 161 STALGGWMGLNQTQVRKILAFSSISHLGWMVIILIYNPKLTLLTFYLYSMMTAAIFLTLNTTNTLKLSSMMTAWTKIPPL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 241 ITTLMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRLAYCATITLPPNSTNHMKQWQIIKP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*.
gi 649912437 321 VPTLTTALTTLSIMLLPLSPMILTTL 346
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNLF 346
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-344 |
4.13e-115 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 337.20 E-value: 4.13e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 1 MNPQANLITTTSLLLGTIITISSNHWMMAWAGLEINTLAILPLISKSHHPRAIEASTKYFLVQAAASTLLLFSSMTNAWF 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 81 TGQWDITQLTHPTSCTLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPTTLLFLTSSSLNPTLLSGMAIA 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 161 STALGGWMGLNQTQVRKILAFSSISHLGWMVIILIYNPKLTLLTFYLYSMMTAAIFLTLNTTNTLKLSSMMTAWTKIPPL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 241 ITTLMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRLAYCATITLPPnSTNHMK-QWQIIK 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFP-STNNMKmKWQFEN 319
|
330 340
....*....|....*....|....*.
gi 649912437 320 PVPTLTT-ALTTLSIMLLPLSPMILT 344
Cdd:MTH00105 320 TKPMTLLpTLIILSTMLLPLTPMLSI 345
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
7.30e-91 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 275.69 E-value: 7.30e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 1 MNPQANLITTTSLLLGTIITISSNHWMMAWAGLEINTLAILPLISKSHHPRAIEASTKYFLVQAAASTLLLFSSMTNAWF 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 81 TGQWDITQLTHPTSCTLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPTTLLFLTSSSLNPTLLSGMAIA 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 161 STALGGWMGLNQTQVRKILAFSSISHLGWMVIILIYNPKLTLLTFYLYSMMTAAIFLTLNTTNTLKLSSMMTAWTKIPPL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 241 ITTLMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRLAYCATITLPPNSTNHMKQWQIIKP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 649912437 321 VPTLTTALTTLSIMLLPLSPMILTTL 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-336 |
3.25e-82 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 253.70 E-value: 3.25e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 1 MNPQANLITTTSLLLGTIITISSNHWMMAWAGLEINTLAILPLISKSHHPRAIEASTKYFLVQAAASTLLLFSSMTNAWF 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 81 TGQWDITQLTHPTSCTLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPTTLLFLTSSSLNPTLLSGMAIA 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 161 STALGGWMGLNQTQVRKILAFSSISHLGWMVIILIYNPKLTLLTFYLYSMMTAAIFLTLNTTNTLKLSSMMTAWTKIPPL 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 241 ITTLMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRLAYCATITLPPNSTNHMKQWQIIKP 320
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGN 320
|
330
....*....|....*.
gi 649912437 321 VPTLTTALTTLSIMLL 336
Cdd:MTH00041 321 ITVYGVILSILSSISI 336
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
5.24e-59 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 193.50 E-value: 5.24e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 1 MNPQANLITTTSLLLGTIITISSNHWMMAWAGLEINTLAILPLISKSHHPRAIEASTKYFLVQAAASTLLLFSSMTNAWF 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 81 TGqwditqLTHPTSCTLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPttlLFLTSSSLNPTLLSGMAIA 160
Cdd:MTH00160 82 LM------LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAP---LILLSYLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 161 STALGGWMGLNQTQVRKILAFSSISHLGWMVIILIYNPKLTLLTFYLYSMMTAAIFLTLNTTNTLKLSSMMTAWTKIPPL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 241 ITTLMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRLAYCAtITLPPNSTNHMKQWQIIKP 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSS-LMLNYNKNKWNLKKKKNKF 311
|
330 340
....*....|....*....|...
gi 649912437 321 VPTLTTALTTLSIMLLPLSPMIL 343
Cdd:MTH00160 312 SLILNFLSFISLFGLILSSLLFL 334
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
13-321 |
5.85e-52 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 174.69 E-value: 5.85e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 13 LLLGTIITISSNHWMMAWAGLEINTLAILPLISKSHHPRAIEASTKYFLVQAAASTLLLFSSMTNAWFTGQWDITqlthp 92
Cdd:MTH00144 13 MVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM----- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 93 tscTLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPTTLL-FLTSSSLNPTLLSGMAIASTALGGWMGLN 171
Cdd:MTH00144 88 ---SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLsNFLDLYWLAYLLCVISVLSALVGSIGGLN 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 172 QTQVRKILAFSSISHLGWMVIILIYNPKLTLLTFYLYSMMTAAIFLTLNTTNTlKLSSMMTAWTKIPPLITTLMLTLLSL 251
Cdd:MTH00144 165 QTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDS-GSMKDLGSLKPSYKTGLSIISLLLSL 243
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 252 AGLPPLTGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRLAYCATITLpPNSTNHMKQWQIIKPV 321
Cdd:MTH00144 244 GGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSS-SKSKKSNSSKVLNSSI 312
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
11-310 |
1.50e-45 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 158.02 E-value: 1.50e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 11 TSLLLGTIITISSNHWMMAWAGLEINTLAILPLISKSHHPRAIEASTKYFLVQAAASTLLLFSsMTNAWFTgqwdITQLT 90
Cdd:MTH00011 13 STMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLG-MTMMWSF----PSLLK 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 91 HPTSCTLLtAAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPTTLLFLTSSSLNPTLLSGMAIASTALGGWMGL 170
Cdd:MTH00011 88 NITALMLL-VSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGM 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 171 NQTQVRKILAFSSISHLGWMVIILIYNPKLTLLTFYLYSMMTAAIFLTLNTTNTLKLSSMMTAWTKIPPLITTLMLTLLS 250
Cdd:MTH00011 167 NQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLS 246
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 251 LAGLPPLTGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRLAYcATITLPPNSTN 310
Cdd:MTH00011 247 LGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSS 305
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
12-298 |
2.25e-42 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 149.82 E-value: 2.25e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 12 SLLLGTIITISSNHWMMAWAGLEINTLAILPLISKSHHPRAIEASTKYFLVQAAASTLLLFSSMtnAWFTGQWditqlTH 91
Cdd:MTH00197 6 IIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGS--LSFSNLY-----LS 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 92 PTSCTLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPttLLFLTSSSLNPTLLSGMAIASTALGGWMGLN 171
Cdd:MTH00197 79 LLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGGIGGMN 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 172 QTQVRKILAFSSISHLGWMVIILIYNPKLTLLTFYLYSMMTAAIFLTLNTTNTLKLSSMMTAWTKIPPLITTLMLTLLSL 251
Cdd:MTH00197 157 QSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSL 236
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 649912437 252 AGLPPLTGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRLAY 298
Cdd:MTH00197 237 GGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAY 283
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-298 |
6.64e-31 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 121.76 E-value: 6.64e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 14 LLGTIITISSNHWMMAWAGLEINTLAILPLIS-KSHHPRAIEASTKYFLVQAAASTLLLF-SSMTNAwFTGQWDITQLTH 91
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYG-ATGSLNLAGIAA 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 92 PTS------------CTLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMK----FPPTTLLFLTSSSLNP---T 152
Cdd:COG1007 191 ALAagganspllllgLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaafAALLRLLVEAFPGLAAdwqL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 153 LLSGMAIASTALGGWMGLNQTQVRKILAFSSISHLGWMVIILIYNPKLTL--LTFYL--YSMMTAAIFLTL-----NTTN 223
Cdd:COG1007 271 LLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNLGAFAVIlllsrKGGE 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 649912437 224 TLKLSSMMTAWTKIPPLITTLMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRLAY 298
Cdd:COG1007 351 AEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVK 425
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
3.82e-27 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 111.07 E-value: 3.82e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 14 LLGTIITISSNHWMMAWAGLEINTLAILPLIS-KSHHPRAIEASTKYFLVQAAASTLLLFSSMTNAWFTGQWDITQLTHP 92
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 93 TSCT------------LLTAAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMK---FPPTTLLFLTSSSLNPT----L 153
Cdd:PRK05777 193 LADGsgnsllllfglvFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAVLLRLLVVAFGGLSEdwqqV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 154 LSGMAIASTALGGWMGLNQTQVRKILAFSSISHLGWMVIILIYNPKLTL--LTFYL--YSMMTAAIF-----LTLNTTNT 224
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYLlaYLFMTLGAFgvislLRRKGGEA 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 649912437 225 LKLSSM-MTAWTKiPPLITTLMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRL 296
Cdd:PRK05777 353 ESISDFaGLSKRS-PLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-286 |
1.21e-25 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 104.32 E-value: 1.21e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 23 SNHWMMAWAGLEINTLAILPLI-SKSHHPRAIEASTKYFLVQAAASTLLLFSSMTNAWFTGQWDITQLTHPTSCT----- 96
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGlnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 97 ------LLTAAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMK------FPPTTLLFLTSSSLNPTLLSGMAIASTAL 164
Cdd:pfam00361 81 llllflLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVkaggygLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 165 GGWMGLNQTQVRKILAFSSISHLGWMVIIL----IYNPKLTLLTFYLYSMMTAAIFL-----TLNTTNTLKLSSMMTAWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLcagsvIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 649912437 236 KIPPLITTLMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTTIATIITLLS 286
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
3.13e-25 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 104.34 E-value: 3.13e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 13 LLLGTIITISSNHWMMAWAGLEINTLAILPLI-SKSHHPRAIEASTKYFLVQAAASTLLLFS-------------SMTNA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 79 WFTGQWDITQLTHPTSCTLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPTTLLFLTSSSLNPTLLSGma 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVNILLIGG-- 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 159 IASTALGGWMGLNQTQVRKILAFSSISHLGWMVIIL----IYNPKLTLLTFYLYSMMTAAIFLTLNTTNTLK--LSSMMT 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIeigsFESIQASLVYLFIYIIMSICVFSIILALNVYKnlIIEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 649912437 233 AWTKIPPLITTLMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRL 296
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-297 |
3.57e-23 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 99.64 E-value: 3.57e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 14 LLGTIITISSNHWMMAWAGLEINTLAILPLIS-KSHHPRAIEASTKYFLVQAAASTLLLFSSMTNAWFTGQWDITQLTHP 92
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 93 TSCT------------LLTAAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMK---FPPTTLLFLTS----SSLNPTL 153
Cdd:TIGR01770 192 LSNGmlnisllllgivLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKiaiFAVFLRLFLYIlfgfSEAWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 154 LSGMAIASTALGGWMGLNQTQVRKILAFSSISHLGWMVIILIYNPKLTL--LTFYL--YSMMTAAIFLTL------NTTN 223
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkaVLFYIfiYALMSLGAFGVLsllrsyKDEW 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 649912437 224 TLKLSSMMTAWTKIPPLITTLMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRLA 297
Cdd:TIGR01770 352 IEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
2.47e-22 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 97.39 E-value: 2.47e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 13 LLLGTIITISSNHWMMAWAGLEINTLAILPLIS-KSHHPRAIEASTKYFLVQAAASTLLLFSSMTNAWFTGQWDI----T 87
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 88 QLTHPTSCTLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPTTLLFLTSSSLNPTLLSgmAIASTALGGW 167
Cdd:MTH00199 186 ILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSIIYGAI 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 168 MGLNQTQVRKILAFSSISHLGWMVIILIYNP----KLTLLTFYLYSMMTAAIF---LTLNTTNTL--KLSSMMtawTKIP 238
Cdd:MTH00199 264 GALNQTKIKRLLAYSGIGHMGFILFGVAIGSfesiQASLIYMIIYVIMSICSFsiiLSLKLTKGLivEVSGLS---RKNP 340
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 649912437 239 PLITTLMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRL 296
Cdd:MTH00199 341 VIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-296 |
5.96e-21 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 92.90 E-value: 5.96e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 13 LLLGTIITISSNHWMMAWAGLEINTLAILPLISKSHHPRAIEASTKYFLVQAAASTLLLFSSMTNAWFTGQWDITQLTH- 91
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAr 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 92 ---------PTSCTLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMK--------------FPPTTLLFLTsss 148
Cdd:COG0651 196 laeldpgllLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTkvgvyailrvltllFGADPALFLG--- 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 149 lnpTLLSGMAIASTALGGWMGLNQTQVRKILAFSSISHLGWMVI-ILIYNPK-LTLLTFYL--YSMMTAAIFLT----LN 220
Cdd:COG0651 273 ---TLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLgLGLGTPLgLAGALFHLlnHALAKALLFLAagaiER 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 649912437 221 TTNTLKLSSMMTAWTKIPPLITTLMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRL 296
Cdd:COG0651 350 ATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-296 |
3.38e-17 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 82.60 E-value: 3.38e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 15 LGTIITISSNHWMMAWAGLEINTLAILPLISKSHHPRAI---------EASTKYFLVQAAASTLLLFSSMTNAWFTGQWD 85
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNEG 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 86 I--TQLTHPTSCT------------LLTAAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFppTTLLFLTSSSLNP 151
Cdd:MTH00198 279 MlgTILSATLETTnielrqgslgylFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 152 TLLSGMAIASTALGGWMGLNQTQVRKILAFSSISHLGWMVIIL-------IYNPKLTLLTFYLYSMMTAAIFLTLNTTNT 224
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVsagtyesLQASWTYAVTYLVSALASFTVICTLEEFGT 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 225 L------------------KLSSMMTAWTKIPPLITTLMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTTIATIITLLS 286
Cdd:MTH00198 437 RtptsrqrdgsfgnynlvrRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIYYLVA 516
|
330
....*....|....*..
gi 649912437 287 LLGL-------FFYLRL 296
Cdd:MTH00198 517 LFAIictcisaFYYIRI 533
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-296 |
1.10e-11 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 65.41 E-value: 1.10e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 51 RAIEASTKYFLVQAAASTLLL--FSsmtnaWFTGQ-------WDI------TQLTHPTSC----TLLTAAISMKLGLVPF 111
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVygFS-----WLYGLsggeielQEIvnglinTQMYNSPGIsialIFITVGIGFKLSLAPF 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 112 HFWFPEVLQGS-----------SLMTSLLLATIMkfppTTLLFLTSSSLNPTLLSGMAIASTALGGWMGLNQTQVRKILA 180
Cdd:CHL00049 234 HQWTPDVYEGSptpvvaflsvtSKVAASALATRI----FDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLA 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 181 FSSISHLGWMVIILI-------YNPKLTLLTFYlysmmtaaIFLTLNTTNTLKLSSMMTA----------WTKIPPLITT 243
Cdd:CHL00049 310 YSSIGQIGYVIIGIIvgdsndgYASMITYMLFY--------IFMNLGTFACIVLFGLRTGtdnirdyaglYTKDPFLALS 381
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 649912437 244 LMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRL 296
Cdd:CHL00049 382 LALCLLSLGGIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKI 434
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-307 |
4.09e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 63.74 E-value: 4.09e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 33 LEINTLAILPLISKSHHPRAIEASTKYFLVQAAASTLLLFS-SMTNAwFTGQWDITQLTH--PTSCTLLTA------AIS 103
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGvGLLYG-VTGTLNMADLAGalAENPTVVTAfgfvllALA 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 104 MKLGLVPFHFWFPEVLQG-SSLMTSLLLATIMKFP--PTTLLFLT-------SSSLNPTLLSGMAIASTALGGWMGLNQT 173
Cdd:PRK08375 214 LKAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAvyALIRIYFTvfggdfrFALGLGWLLAVLALLSMLVGSLAALGQD 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 174 QVRKILAFSSISHLGWMVIILIYNPKLTLL--TFYL--YSMMTAAIFLTLN----TTNTLKLSSMMTAWTKIPPLITTLM 245
Cdd:PRK08375 294 DVKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLAAGaievTYGTRRLSELSGLGRRMPLTAAAFA 373
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 649912437 246 LTLLSLAGLPPLTGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRLAYCATITLPPN 307
Cdd:PRK08375 374 VASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPP 435
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-287 |
1.22e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 62.42 E-value: 1.22e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 33 LEINTLAILPLIS-KSHHPRAIEASTKYFLVQAAASTLLLFSSmtnAWFTGQWDI-------------TQLTHPTSCTLL 98
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGI---ALLYGQYGTlnmaylavkmsenPTVVAKIALALF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 99 TAAISMKLGLVPFHFWFPEVLQG--SSLMTSLLLATIMKFPPT--TLLFLTSSSLNPT----LLSGMAIASTALGGWMGL 170
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYPAapSSISAMLLVIKQAGLYALarVLFSIYGPAINLAtvgwVIIILGCLTMFVGVAMAV 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 171 NQTQVRKILAFSSISHLGWMV------IILIYNPKLT----------LLTFYLYSMMTAAIFLT----LNTTNTLKLSSM 230
Cdd:PRK08376 307 VQKDVKRLLAYHSVSQIGYMLlglgvgLAALGDPAMAsygeialaggIYHIVNHALYKALLFLTagavIYETGTRNLNEL 386
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 649912437 231 MTAWTKIPPLITTLMLTLLSLAGLPPLTGFLPKWLIIQE--LTKQELTTIATIITLLSL 287
Cdd:PRK08376 387 GGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESsaLFNPILGVIAMIGSVLTL 445
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
81-263 |
9.97e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 56.86 E-value: 9.97e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 81 TGQWDITQL-THPTSCTLLTAAISM-------KLGLVPFHFWFPEVLQGSSLMTSLLLATIM---------KFPPTtllF 143
Cdd:PRK12644 184 AGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPG---F 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 144 LTSSSLNPTLLsGMAIASTALGGWMGLNQTQVRKILAFSSISHLGWMVIILIYNPK------LTLLTfyLYSMMTAAIFL 217
Cdd:PRK12644 261 ADVPVWRPTVL-VLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRdaalagLAMLL--AHALFKAALFL 337
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 649912437 218 TL----NTTNTLKLSSMMTAWTKIPPLITTLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 338 VVgiidHSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
34-298 |
1.68e-08 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 55.77 E-value: 1.68e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 34 EINTLAILPLISKSHHpRAIEASTKYFLVQAAASTLLLFSSMTNAWFTGQWDIT-------QLTHPTSC----TLLTAAI 102
Cdd:PRK08668 128 EIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFAdisqgliNDTSTGFAlivfLFLLAFG 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 103 SMKLGLVPFHFWFPE-----------VLQGS-SLMTSLLLATIMKFPPTTLLFLTSSSLNPTLLSGMAIA-----STALG 165
Cdd:PRK08668 207 VAKAGIFPLHVWAPDayseapqsfsaVLSGQlSKLGAYGFLLVLYVLPGTKLFSEFGTYRGVPLFNYILAwlgniSIIVG 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 166 GWMGLNQTQVRKILAFSSISHLGWMVIILIYNPKLTLL--TFYLYS--MMTAAIFLTLNT----TNTLKLSSMMTAWTKI 237
Cdd:PRK08668 287 TLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAggLFHVFNhaLFKGLFFLIFAAviyrTGTTKISEMGGLIEKM 366
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 649912437 238 PPLITTLMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRLAY 298
Cdd:PRK08668 367 PFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPLA 427
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-192 |
3.62e-08 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 54.70 E-value: 3.62e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 49 HPRAIEASTKYFLVQAAASTLLLFSSMTNAWFTGQW--DITQLTH----PTSCTLLTAAISM----KLGLVPFHFWFPEV 118
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAaplpLTAQLLLFLAFFIafavKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 119 LQGSSLMTSLLLATIMK--------------FPPTTLLFLTssslnptLLSGMAIASTALGGWMGLNQTQVRKILAFSSI 184
Cdd:COG1008 236 HVEAPTAGSVLLAGVLLkmggygllrfalplFPEASAYFAP-------LLAALGVIGIIYGALVALAQTDLKRLIAYSSV 308
|
....*...
gi 649912437 185 SHLGWMVI 192
Cdd:COG1008 309 SHMGFVLL 316
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
6.38e-08 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 53.90 E-value: 6.38e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 50 PRAIEASTKYFLVQAAASTLLLF-SSMTNAWFTGQwdiTQLTH-----PTSCTLLT--------AAISMKLGLVPFHFWF 115
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGS---TQLSAialalITSPSLGLalalvfviAGIAFKISAVPFHQWT 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 116 PEVLQGSSLMTSLLLATIMK---FPPTTLLFLTSSSLNPT----LLSGMAIASTALGGWMGLNQTQVRKILAFSSISHLG 188
Cdd:PRK02504 234 PDVYEGSPTPVVAFLSVGSKaagFALAIRLLVTAFPSFDEqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAG 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 189 WMVIILIYNPK--LTLLTFYL--YSMMT----AAIFLTLNTTNTLKLSSMMTAWTKIPPLITTLMLTLLSLAGLPPLTGF 260
Cdd:PRK02504 314 FVMIGLVAGTEagYASMVFYLlaYLFMNlgafACVILFSLRTGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGF 393
|
...
gi 649912437 261 LPK 263
Cdd:PRK02504 394 FGK 396
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
23-298 |
2.13e-07 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 52.46 E-value: 2.13e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 23 SNHWMMAWAGLEINTLAILPLISKSHH-PRAIEASTKYFLVQAAASTLLLFSSMTNAWFTGQWDITQL----THPTSCTL 97
Cdd:COG1009 130 SDNLLLLFVFWELVGLCSYLLIGFWYEkPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELlaaaPTILSSPL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 98 LTAAISM-------KLGLVPFHFWFPEVLQG----SSLMTSlllAT--------IMKFPPttlLFltssSLNPTLLSGMA 158
Cdd:COG1009 210 LTLILLLlllgafgKSAQFPLHFWLPDAMEGptpvSALLHA---ATmvkagvylLARLSP---LF----ALSPVWLTVVA 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 159 I--ASTAL-GGWMGLNQTQVRKILAFSSISHLGWMVIILIynpkltlltfylYSMMTAAIFLTLN--------------- 220
Cdd:COG1009 280 IigAITALfAALIALAQTDIKRVLAYSTVSQLGYMFLALG------------VGAYVAALFHLLThaffkallflgagsv 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 221 --TTNTLKLSSMMTAWTKIPPLITTLMLTLLSLAGLPPLTGFLPKWLIIQE-LTKQELTTIATIITLL-SLLGLFFYLRL 296
Cdd:COG1009 348 ihATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAaLEAGGLGPLLLAVALLgAFLTAFYSFRL 427
|
..
gi 649912437 297 AY 298
Cdd:COG1009 428 FF 429
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
109-289 |
5.21e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 51.46 E-value: 5.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 109 VPFHFWFPEVLQG---------SSLMTSLLLATIMKFPPTtllfLTSSSLNPTLLSGMAIASTALGGWMGLNQTQVRKIL 179
Cdd:PRK12647 212 FPFHFWLPNAMEAptpvsaylhSATMVKAGIYLLARLNPV----LGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLIL 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 180 AFSSISHLGWMVIILIYNPKLTLLTFYLY----SMMTAAIFLTLNT----TNTLKLSSMMTAWTKIPPLITTLMLTLLSL 251
Cdd:PRK12647 288 AYSTVSALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAGIidheTGTRDITKLGGLRRAMPITAAAALLAALSM 367
|
170 180 190
....*....|....*....|....*....|....*...
gi 649912437 252 AGLPPLTGFLPKWLIIQELTkqELTTIATIITLLSLLG 289
Cdd:PRK12647 368 AGLPPLFGFLAKELIYEALL--EAPLWSLILTVAAVLG 403
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-292 |
8.46e-07 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 50.32 E-value: 8.46e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 50 PRAIEASTKYFLVQAAASTLLLFSSMTNAWFTGQ-WDITQL-THPTSCTLLT-------AAISMKLGLVPFHFWFPEVLQ 120
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGtFDLLELlNLPLPFGVQTwlflaffIAFAVKVPLFPLHTWLPDAHV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 121 GSSLMTSLLLATIMK--------------FPPTTLLFLtssslnpTLLSGMAIASTALGGWMGLNQTQVRKILAFSSISH 186
Cdd:TIGR01972 232 EAPTAGSVILAGVLLkmgtygflrfnlplFPDASLYFA-------PVLAALGVIAIIYGALIALAQTDIKRLIAYSSISH 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 187 LGWMVIILIYNPKLTLL--TFYLYS--MMTAAIFLTLNT----TNTLKLSSMMTAWTKIPPLITTLMLTLLSLAGLPPLT 258
Cdd:TIGR01972 305 MGFVLLGIFSFNELGISgaVFQMIShgLITAALFLLVGVlyerAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTS 384
|
250 260 270
....*....|....*....|....*....|....
gi 649912437 259 GFLPKWLIIQELTKqelttIATIITLLSLLGLFF 292
Cdd:TIGR01972 385 GFVGEFLILLGSFK-----VNPVVAFLAALGIVL 413
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
92-293 |
4.60e-06 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 48.02 E-value: 4.60e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 92 PTSCTLLTAAISMKLGLVPFhFWFPEVLQGSSLMTSLLLATIMK-------FPPTTLLFLTSSSLNPTLLSGMAIASTAL 164
Cdd:PRK12663 207 TTIALLFLLAFGMKAALFPF-MWLPAAYHTPNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVI 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 165 GGWMGLNQTQVRKILAFSSISHLGWMVI-ILIYNPK-LTLLTFYL-YSMMT-AAIFLTLNTTNTL----KLSSMMTAWTK 236
Cdd:PRK12663 286 GALGALAYKDIRRIAGYQVISSIGFILLgLALGTPAgINGAIFYLvHDMVVkTALFLIAGSLVRLtgyrSLQYLGGLYRK 365
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 649912437 237 IPPLITTLMLTLLSLAGLPPLTGFLPKWLIIQ-ELTKQE-----LTTIATIITLLSLLGLFFY 293
Cdd:PRK12663 366 EPLFGALFLILIFAIGGLPPFSGFWGKVLLVQgALDNGAyillaLMLITSLITMYSLFRIFFL 428
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-298 |
9.46e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 47.33 E-value: 9.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 34 EINTLAILPLISKSHHPRAIEASTKYFLVQAAASTLLLFSSMTNAWFTGQWDITQ-----LTHPTSCTLLTAAISMKLGL 108
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSPVIYGGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 109 V------PFHFWFPEVLQGSSLMTSLLLATIMKFPPTTL------LFLTSSSLNP--TLLSGMAIASTALGGWMGLNQTQ 174
Cdd:PRK06277 210 LygsglpPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALmlvifkLFGGLSYFPSaqGVLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 175 VRKILAFSSISHLGWMVIILIYNPKLTLLTFYLYS----MMTAAIFL----TLNTTNTLKLSSMMTAWTKIPPLITTLML 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAinhvIYKSALFLgagiVSYRTKTSNLRKLGGLLPVMPVVAFMVLC 369
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 649912437 247 TLLSLAGLPPLTGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRLAY 298
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY 421
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
29-304 |
1.29e-05 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 46.96 E-value: 1.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 29 AWaglEINTLAILPLISKSHhPRAIEASTKYFLVQAAASTLLLFSSMTNAWFTGQWDITQLTHPTS---CTLLTAAISM- 104
Cdd:PRK12650 138 AW---ELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVwaeKPGLTTVVAVl 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 105 -------KLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPTTLL--FLTSSSLNPT---LLSGMAIASTALGGWMGLNQ 172
Cdd:PRK12650 214 iavaaftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLlrFSPVFHDVAVwnwLLIIVGMITALMGAVFAVQK 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 173 TQVRKILAFSSISHLGWMV-IILIYNP-KLT--LLTFYLYSMMTAAIFLTL----NTTNTLKLSSMMTAWTKIPPLITTL 244
Cdd:PRK12650 294 TDLKKLTAYSTVSQLGWIVaTIGVGTPfALTaaVVHTLAHALFKSSLFMLIgvvdHQAGTRDIRRLGSLWRRMPFTFVSV 373
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 245 MLTLLSLAGLPPLTGFLPKWLIIQELTKQELTTiATIITLLSLLGLFFYLRLAYCATITL 304
Cdd:PRK12650 374 TIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGN-AGVVLLLVGAALGAVFTFAYSARLVL 432
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
1.53e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 46.75 E-value: 1.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 48 HHPRAIEASTKYFLVQAAASTLLLFSSMTNAWFTGQWDITQLTHPTSC--------------TLLTAAISMKLGLVPFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELienikghplflitlILIFIGAAAKSAQGPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 114 WFPEVLQGSSLMTSLLLATIMKFPPTTLLFLTSSSLNPT-----LLSGMAIASTALGGWMGLNQTQVRKILAFSSISHLG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 189 WMVIILIYNPK------LTLLTFYL--YSMMTAAIFLTL----NTTNTLKLSSMMTAWTKIPPLITTLMLTLLSLAGLPP 256
Cdd:PRK12649 316 YLMTMYGYTTYhepglgVAAATFHLlnHATFKACLFLVAgivaHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
....*..
gi 649912437 257 LTGFLPK 263
Cdd:PRK12649 396 LNGFLSK 402
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-340 |
6.38e-05 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 39.93 E-value: 6.38e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 649912437 291 FFYLRLAYCATITLPPNSTNHMKQWQIIKPVPTLTTALTT-LSIMLLPLSP 340
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLLLPTLTtLSILLLPLTP 51
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
1.12e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 43.79 E-value: 1.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 33 LEINTLAILPLISKSHHPRAIEASTKYFLVQAAASTLLLFSSMTNAWFTGQWDITQLTH--PTSCTLLTAAISMKLGLVP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 111 FHFWFPEVLQGSSLMTSLLLATIMK----FPPTTLLFLTSSSLNPtlLSGMAIASTALGGWMGLNQTQVRKILAFSSISH 186
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVkagvFPLVRCALDVPGLDLI--VRIFGVGTALLGVLFALLEKDLKRMLAFSTISQ 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 187 LGWMVIILIYNPKLTLltfyLYSMMTAAIFL---TLNTTNTLKLSSMMTA-WTKIPplittLMLTLLSLAGLPPLTGFLP 262
Cdd:PRK07234 281 LGFILAAPLVGGLYAL----AHGLVKSTLFLcagALPSRNFTELISQMLGiGKWIP-----LTMASFSIAGFPLLAGFVS 351
|
....*....
gi 649912437 263 KWLIIQELT 271
Cdd:PRK07234 352 KVLTLKNLL 360
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-290 |
1.12e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 43.87 E-value: 1.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 55 ASTKYFLVQAAASTLLLFSSMTNAWFTGQ--WDITQLTH---PTSCTLLT-----AAISMKLGLVPFHFWFPEVLQGSSL 124
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAksyPLALELLLyagflIAFGVKLPIFPLHTWLPDAHGEASA 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 125 MTSLLLATIM-KFPPTTLLFLTSSSLNPT------LLSGMAIASTALGGWMGLNQTQVRKILAFSSISHLGWMVI----- 192
Cdd:PRK12561 218 PVSMILAGVLlKMGGYALIRFNVQMLPDAhvyfapALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLgiaaf 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 193 --ILIYNPKLTLLTfylYSMMTAAIFL----TLNTTNTLKLSSMMTAWTKIPPLITTLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK12561 298 tdLGISGAMLQMIS---HGLIAAALFFltgvTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTV 374
|
250 260
....*....|....*....|....*.
gi 649912437 267 IQELTKQEL--TTIATIITLLSLLGL 290
Cdd:PRK12561 375 FLGITSSDVysSTFRTITILLAAVGL 400
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-203 |
1.40e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 43.54 E-value: 1.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 55 ASTKYFLVQAAASTLLLFSSMTNAWFTG--QWDITQL---THPTSCTLLTAA-----ISMKLGLVPFHFWFPEVLQGSSL 124
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLrshTLPLSTQLLLLApilvgFGIKIPLVPFHTWLPDAHVEAST 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 125 MTSLLLATIM-KFPPTTLL------FLTSSSLNPTLLSGMAIASTALGGWMGLNQTQVRKILAFSSISHLGWMVIILIYN 197
Cdd:PRK06473 238 PVSVLLAGVLlKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAA 317
|
....*.
gi 649912437 198 PKLTLL 203
Cdd:PRK06473 318 TPLSIL 323
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
102-267 |
1.49e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 43.57 E-value: 1.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 102 ISMKLGLVPFHFWFPEVLQG---------SSLMTSLLLATIMKFPPTTL---LFLTSSSLNPTLLSgMAIASTALGGWMG 169
Cdd:PRK12662 219 LFIKAALFPFHKWLIQAYSEapsfisvffSGTSTKVMIYLIIRIVYDVFkanFVFTTLPFNNVFMI-LAALAIVFGSVLA 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 170 LNQTQVRKILAFSSISHLGWMVIILIYNPKLTLLTFYLY----SMMTAAIFLTLNTT----NTLKLSSMMTAWTKIPPLI 241
Cdd:PRK12662 298 ILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSGSIsyhfGTTKLEDCLNLWKSMPKIT 377
|
170 180
....*....|....*....|....*.
gi 649912437 242 TTLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK12662 378 LAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-192 |
1.72e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 43.20 E-value: 1.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 13 LLLGTIITISSNHWMMAWAGLEINTLAILPLISKSHHPRAIEASTKYFLVQAAA------STLLLFSSMTNAWFTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 87 TQLTHPT---SCTLLTAAISM-------KLGLVPFHFWFPEV-LQGSSLMTSLLLATIMKFPPTTLLFLTS-------SS 148
Cdd:PRK08676 191 TELAAHAsllSPSVLGASFLFifigflaKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaAE 270
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 649912437 149 LNPTLLSGMAIASTALGGWMGLNQTQVRKILAFSSISHLGWMVI 192
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLL 314
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-296 |
1.84e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 43.01 E-value: 1.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 103 SMKLGLVPFHFWFPEVLQG---------SSLMTSLLLATIMKFppTTLLFLTSSSLNPTLLSGMAIASTALGGWMGLNQT 173
Cdd:PRK07691 220 ATKAGLFPLYFWLPGSYYAppiaiaalfGALLTKVGVYAIART--FTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYF 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 174 QVRKILAFSSISHLGWMVI-ILIYNPK-LTLLTFYLYSMM--TAAIFL----TLNTTNTLKLSSMMTAWTKIPPLITTLM 245
Cdd:PRK07691 298 DIKKIIIYNIMIAVGVILVgVAMMTESgMIGAIYYLIHDMivKAALFLligiMIKITGTTDLKKMGGLIKRYPVLGWMFF 377
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 649912437 246 LTLLSLAGLPPLTGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRL 296
Cdd:PRK07691 378 IAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-192 |
2.19e-04 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 42.88 E-value: 2.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 50 PRAIEASTKYFLVQAAASTLLLFSSMTNAWF----TGQWDITQL-THPTSCTLLT-------AAISMKLGLVPFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLlNLPLPPGVQYwlflaffIAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 118 VLQGSSLMTSLLLATIMK--------------FPPTTLLFLTssslnptLLSGMAIASTALGGWMGLNQTQVRKILAFSS 183
Cdd:PRK05846 237 AHVQAPTAGSVLLAGILLkmgaygllrfslplFPDASHEFAP-------IIITLGVIAIIYGALVALAQTDIKKLIAYSS 309
|
....*....
gi 649912437 184 ISHLGWMVI 192
Cdd:PRK05846 310 ISHMGFVTL 318
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
103-268 |
2.54e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 43.02 E-value: 2.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 103 SMKLGLvpfHFWFPEVLQGSSLMTSLLLATIMKFPPTTLLFLTSSSLNPTLLSGMAI----ASTAL-GGWMGLNQTQVRK 177
Cdd:MTH00032 239 SAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIItifgALTAFfAATVGLVQNDLKK 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 178 ILAFSSISHLGWMVIILIYNPKLTLLTFYL--YSMMTAAIFLTLN------TTNTLKLSSMMTAWTKIPPLITTLMLTLL 249
Cdd:MTH00032 316 VIAYSTCSQLGYMVLIIGIEGSHNVGLFHLvnHAFFKALLFLSAGsvihstTVDEQDMRKMGGLIHSIPFTYTMMLIGSF 395
|
170
....*....|....*....
gi 649912437 250 SLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00032 396 SIMGLPYLTGFYSKDLILE 414
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
13-192 |
3.04e-04 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 42.61 E-value: 3.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 13 LLLGTIITISSNHWMMAWAGLEINTLAILPLISKSHHPRAIEASTKYFLV------QAAASTLLLFSS----MTNAWFTG 82
Cdd:PRK06458 117 FLFTMLLALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIIcsvgvaFALFGTILVYANaatvMGDGEMAI 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 83 QW-DITQLTHPTSCTLLTAAISM-------KLGLVPFHFWFPE-----------VLQGSSLMTSLLLatIMKFPPTTLLF 143
Cdd:PRK06458 197 LWtELLKHASLLDPTLMKLAFVFlligfgtKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALYA--VLRYYILIDAA 274
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 649912437 144 LTSSSLNPtLLSGMAIASTALGGWMGLNQTQVRKILAFSSISHLGWMVI 192
Cdd:PRK06458 275 IGSDFPGR-LLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAF 322
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
59-291 |
8.95e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 41.25 E-value: 8.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 59 YFLVQAAASTLLLFSSMTNAWF-TGQWDITQLTHPT-----SCTLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSLLLAT 132
Cdd:PRK08667 166 FYFVMTQLSTVFLMLGIIVLFIqTGSFELSPLGASAgilslVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSG 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 133 IM-KFPPTTLLFLTSSSLNPTLLSGMAI-----ASTALGGWMGLNQTQVRKILAFSSISHLG--------WMVIILIYNP 198
Cdd:PRK08667 246 VMlKVAVYGLVRFLMDVLSPELWWGVLIllagsISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVYGLD 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 199 KLTLLTF--YLYSMMTAAIFLTL---------NTTNTLKLSSMMTAWTKIPPLITTLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK08667 326 TLALLALggALFHSLNHALFKSLlfltagsvvHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLY 405
|
250 260
....*....|....*....|....*
gi 649912437 268 QELTKQELTTIATI-ITLLSLLGLF 291
Cdd:PRK08667 406 ESFFQSFSVADPLIkILLFSVLAIF 430
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
12-284 |
3.19e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 39.41 E-value: 3.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 12 SLLLGTIITISSNHWMMaWAGLEINTLAILPLISKSHHPRAIEASTKYFLVQAAASTLL-------LFSSMTNAWFTGQW 84
Cdd:PRK06589 125 TILIGVLIALSSDLFTM-FVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLflpavilIYTKTGNLDFVSGG 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 85 DITQLTHPTSCTLLTAAISmKLGLVPFHFWFPEVLQGSSLMTSLLLATIM----KFPPTTLLFLTSSSLNPTLLSGM--- 157
Cdd:PRK06589 204 LFSKNQSIILLLMFIYGIA-KTAIFPVHSWLPAAMVAHYPVSALLHAVIVvktgLFCIYKILLYIFGLSYLQRIFAEfnw 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 158 ----AIASTALGGWMGLNQTQVRKILAFSSISHLGWMVII--LIYNPKLTLLTFYL--YSMMTAAIFLTLNTTNTLK--- 226
Cdd:PRK06589 283 lifiPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSafILTPKALGAAILHLvsHSFAKICLFYSMGSIYSLKked 362
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 649912437 227 -LSSMMTAWTKIPPLITTLMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTTIATIITL 284
Cdd:PRK06589 363 qVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVML 421
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
4-192 |
3.35e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 39.30 E-value: 3.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 4 QANLITTTSLLLGTI-ITISSNHW---MMAWA--GLEINTLailpLISKSHHPRAIEASTKYFLVQAAASTLLLFSSMTN 77
Cdd:PRK08168 99 QRRYVRALAGVLAAVhLLVLSDHLlvlIAAWAaiSLALHRL----LCFYPDRPFARLAAHKKFIADRLAELLLLAAAALA 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 78 AWFTGQWDITQL-----THPTS------CTLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATI--------MKFPP 138
Cdd:PRK08168 175 YLEVGSLSLSALwahlaAQGASpslqaaALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVvnlggfvlIRFAP 254
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 649912437 139 ttllFLTSSSLNPTLLSGMAIASTALGGWMGLNQTQVRKILAFSSISHLGWMVI 192
Cdd:PRK08168 255 ----LLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLL 304
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-195 |
3.84e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 39.13 E-value: 3.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 101 AISMKLGLVPFHFWFPEVLQGSSLMTSLLLATI-----------MKFPpttLLFLTSSSLNPTLLSgMAIASTALGGWMG 169
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGIllklggyglvrLSWP---ILPLGAQNLAPAVIA-MGIVGIVYGSFAT 314
|
90 100
....*....|....*....|....*.
gi 649912437 170 LNQTQVRKILAFSSISHLGWMVIILI 195
Cdd:MTH00226 315 CRQIDVKRLVAYSSVAHMGLVSITLV 340
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-268 |
5.46e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 38.54 E-value: 5.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 55 ASTKYFLVQAAASTLLLFSSMTNAWFTGQ----------WDITQLTHPTSCTLLTAAISMKLGLVPFHFWFPEVLQGSSL 124
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGStsfdydaistQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 125 MTSLLLATIMKFPPTTLLFLTSSSLNP----TLLSGMAI---ASTALGGWMGLNQTQVRKILAFSSISHLGWMVIILIYN 197
Cdd:PRK07363 238 AVAILLGGVLAKLGTYGLLRFGLQLFPqtwsLVAPGLAIigtISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAG 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 198 PKLTLLTfYLYSMMTAAIFLTL------------NTTNTLKLSSMMTAWTKIPPLITTLMLTLLSLAGLPPLTGFLPKWL 265
Cdd:PRK07363 318 TQLSLLG-AVAQMISHGLILALlfhlvgiverkvGTRDLDVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFI 396
|
...
gi 649912437 266 IIQ 268
Cdd:PRK07363 397 VFQ 399
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-320 |
6.37e-03 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 38.52 E-value: 6.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 95 CTLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSLLLATIMKFPPTTLLFLTSSSLNPTLLSGMAIA-----STALGGWMG 169
Cdd:MTH00020 213 CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTivgslTVFFAATVG 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 170 LNQTQVRKILAFSSISHLGWMVIIL-IYNPKLTLLTFYLYSMMTAAIFLTLNT-----TNTLKLSSMMTAWTKIPPLITT 243
Cdd:MTH00020 293 LVQNDLKKVIAYSTCSQLGYMVVACgLSHYSISLFHLMNHAFFKALLFLSAGSvihalSDEQDMRKMGGLISFLPLTYIF 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 649912437 244 LMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTTIATIITLLS-LLGLFFYLRLAYCATITLPPNSTN-----HMKQWQI 317
Cdd:MTH00020 373 FLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSaLLTAFYSIRLIYLTFLSNTNLKKAvffhlHEGDWNL 452
|
...
gi 649912437 318 IKP 320
Cdd:MTH00020 453 LLP 455
|
|
| |
