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Conserved domains on  [gi|658157647|gb|AID57405|]
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cytochrome b (mitochondrion) [Koreoleptoxis nodifila]

Protein Classification

cytochrome b( domain architecture ID 11475921)

cytochrome b is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), a respiratory chain that generates an electrochemical potential coupled to ATP synthesis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CYTB MTH00145
cytochrome b; Provisional
 1-379 0e+00

cytochrome b; Provisional


:

Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 696.65  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647   1 MRTPIRKTHPVLKMANGALVDLPAPSNLSVWWNFGSLLGLCLIIQILTGLFLAMHYTANTDLAFSSVIHISRDVSYGWLL 80
Cdd:MTH00145   1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  81 RALHANGASWFFICLYLHIGRGMYYGSYFYHHTWNIGVILLFLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160
Cdd:MTH00145  81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 161 LVEWVWGGFAVDNATLTRFYSIHFLLPFIIAAMSALHLLFLHETGSNNPLGLNSDGEKVPFHSYYSYKDLVGFIALFIML 240
Cdd:MTH00145 161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 241 SFLALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVASIAILFILPFTHMGKFRSMAFYS 320
Cdd:MTH00145 241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 658157647 321 LNQILFWSFIGLFLILTWIGACPVEAPYEQIGQVFTLLYFMYFILAPLMQMSWDSLLNF 379
Cdd:MTH00145 321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLILPLVQKLWDNILDY 379
 
Name Accession Description Interval E-value
CYTB MTH00145
cytochrome b; Provisional
 1-379 0e+00

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 696.65  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647   1 MRTPIRKTHPVLKMANGALVDLPAPSNLSVWWNFGSLLGLCLIIQILTGLFLAMHYTANTDLAFSSVIHISRDVSYGWLL 80
Cdd:MTH00145   1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  81 RALHANGASWFFICLYLHIGRGMYYGSYFYHHTWNIGVILLFLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160
Cdd:MTH00145  81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 161 LVEWVWGGFAVDNATLTRFYSIHFLLPFIIAAMSALHLLFLHETGSNNPLGLNSDGEKVPFHSYYSYKDLVGFIALFIML 240
Cdd:MTH00145 161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 241 SFLALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVASIAILFILPFTHMGKFRSMAFYS 320
Cdd:MTH00145 241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 658157647 321 LNQILFWSFIGLFLILTWIGACPVEAPYEQIGQVFTLLYFMYFILAPLMQMSWDSLLNF 379
Cdd:MTH00145 321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLILPLVQKLWDNILDY 379
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
23-366 9.74e-125

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 364.88  E-value: 9.74e-125
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  23 PAPSNLSVWWNFGSLLGLCLIIQILTGLFLAMHYTANTDLAFSSVIHISRDVSYGWLLRALHANGASWFFICLYLHIGRG 102
Cdd:COG1290   31 PFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRG 110

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 103 MYYGSYFYHH--TWNIGVILLFLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFAVDNATLTRFY 180
Cdd:COG1290  111 FFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFF 190

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 181 SIH-FLLPFIIAAMSALHLLFLHETGSNNPLGLNSDGEK----VPFHSYYSYKDLVGFIALFIMLSFLALFSPQLltDPE 255
Cdd:COG1290  191 ALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFVFLGVFALLAFFFPIN--PPP 268

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 256 NFIPANPLVTPVHIQPEWYFLFAYAILRSIP--NKLGGVIGLVASIAILFILPFTHMGKFRSMAFYSLNQILFWSFIGLF 333
Cdd:COG1290  269 NYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFF 348

                        330       340       350
                 ....*....|....*....|....*....|...
gi 658157647 334 LILTWIGACPVeaPYEQIGQVFTLLYFMYFILA 366
Cdd:COG1290  349 IVLTILGANPP--IATLLGSINTVTYFAFFLIV 379
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 10-207 1.40e-87

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 263.07  E-value: 1.40e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  10 PVLKMANGALVDLPAPSNLSVWWNFGSLLGLCLIIQILTGLFLAMHYTANTDLAFSSVIHISRDVSYGWLLRALHANGAS 89
Cdd:cd00284    1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  90 WFFICLYLHIGRGMYYGSYFYHH--TWNIGVILLFLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWG 167
Cdd:cd00284   81 MFFLMLYLHIFRGLYYGSYKKPRelTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 658157647 168 GFAVDNATLTRFYSIHFLLPFIIAAMSALHLLFLHETGSN 207
Cdd:cd00284  161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
19-205 1.87e-80

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 244.60  E-value: 1.87e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647   19 LVDLPAPSNLSVWWNFGSLLGLCLIIQILTGLFLAMHYTANTDLAFSSVIHISRDVSYGWLLRALHANGASWFFICLYLH 98
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647   99 IGRGMYYGSYFYHH--TWNIGVILLFLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFAVDNATL 176
Cdd:pfam00033  81 IFRGLYYGGFSYPRelTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 658157647  177 TRFYSIHFLLPFIIAAMSALHLLFLHETG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 222-307 2.00e-09

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 55.96  E-value: 2.00e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  222 HSYYSY----KDLVGFIALFIMLSF-----LALFSPQLLTDPenfipANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGV 292
Cdd:TIGR01156  24 HNYYGEpawpNDLLYIFPVVILGTIacvvgLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGV 98

                          90
                  ....*....|....*
gi 658157647  293 IGLVASIAILFILPF 307
Cdd:TIGR01156  99 LLMAAVPAGLLTVPF 113
 
Name Accession Description Interval E-value
CYTB MTH00145
cytochrome b; Provisional
 1-379 0e+00

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 696.65  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647   1 MRTPIRKTHPVLKMANGALVDLPAPSNLSVWWNFGSLLGLCLIIQILTGLFLAMHYTANTDLAFSSVIHISRDVSYGWLL 80
Cdd:MTH00145   1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  81 RALHANGASWFFICLYLHIGRGMYYGSYFYHHTWNIGVILLFLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160
Cdd:MTH00145  81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 161 LVEWVWGGFAVDNATLTRFYSIHFLLPFIIAAMSALHLLFLHETGSNNPLGLNSDGEKVPFHSYYSYKDLVGFIALFIML 240
Cdd:MTH00145 161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 241 SFLALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVASIAILFILPFTHMGKFRSMAFYS 320
Cdd:MTH00145 241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 658157647 321 LNQILFWSFIGLFLILTWIGACPVEAPYEQIGQVFTLLYFMYFILAPLMQMSWDSLLNF 379
Cdd:MTH00145 321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLILPLVQKLWDNILDY 379
CYTB MTH00156
cytochrome b; Provisional
 12-367 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 655.31  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  12 LKMANGALVDLPAPSNLSVWWNFGSLLGLCLIIQILTGLFLAMHYTANTDLAFSSVIHISRDVSYGWLLRALHANGASWF 91
Cdd:MTH00156   1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  92 FICLYLHIGRGMYYGSYFYHHTWNIGVILLFLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFAV 171
Cdd:MTH00156  81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 172 DNATLTRFYSIHFLLPFIIAAMSALHLLFLHETGSNNPLGLNSDGEKVPFHSYYSYKDLVGFIALFIMLSFLALFSPQLL 251
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 252 TDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVASIAILFILPFTHMGKFRSMAFYSLNQILFWSFIG 331
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320

                        330       340       350
                 ....*....|....*....|....*....|....*.
gi 658157647 332 LFLILTWIGACPVEAPYEQIGQVFTLLYFMYFILAP 367
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIINP 356
CYTB MTH00119
cytochrome b; Provisional
 1-379 0e+00

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 630.01  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647   1 MRTPIRKTHPVLKMANGALVDLPAPSNLSVWWNFGSLLGLCLIIQILTGLFLAMHYTANTDLAFSSVIHISRDVSYGWLL 80
Cdd:MTH00119   1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  81 RALHANGASWFFICLYLHIGRGMYYGSYFYHHTWNIGVILLFLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160
Cdd:MTH00119  81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 161 LVEWVWGGFAVDNATLTRFYSIHFLLPFIIAAMSALHLLFLHETGSNNPLGLNSDGEKVPFHSYYSYKDLVGFIALFIML 240
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 241 SFLALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVASIAILFILPFTHMGKFRSMAFYS 320
Cdd:MTH00119 241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320

                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 321 LNQILFWSFIGLFLILTWIGACPVEAPYEQIGQVFTLLYFM-YFILAPLMQMSWDSLLNF 379
Cdd:MTH00119 321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTiLLILFPLLGALENKMLNY 380
CYTB MTH00016
cytochrome b; Validated
 1-377 0e+00

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 628.25  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647   1 MRTPIRKTHPVLKMANGALVDLPAPSNLSVWWNFGSLLGLCLIIQILTGLFLAMHYTANTDLAFSSVIHISRDVSYGWLL 80
Cdd:MTH00016   1 MFSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  81 RALHANGASWFFICLYLHIGRGMYYGSYFYHHTWNIGVILLFLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160
Cdd:MTH00016  81 RNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 161 LVEWVWGGFAVDNATLTRFYSIHFLLPFIIAAMSALHLLFLHETGSNNPLGLNSDGEKVPFHSYYSYKDLVGFIALFIML 240
Cdd:MTH00016 161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 241 SFLALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVASIAILFILPFTHMGKFRSMAFYS 320
Cdd:MTH00016 241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYP 320

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 658157647 321 LNQILFWSFIGLFLILTWIGACPVEAPYEQIGQVFTLLYFMYFILAPLMQMSWDSLL 377
Cdd:MTH00016 321 LNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMINPLLMKLWDKLL 377
CYTB MTH00131
cytochrome b; Provisional
 5-368 0e+00

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 621.29  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647   5 IRKTHPVLKMANGALVDLPAPSNLSVWWNFGSLLGLCLIIQILTGLFLAMHYTANTDLAFSSVIHISRDVSYGWLLRALH 84
Cdd:MTH00131   4 LRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLH 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  85 ANGASWFFICLYLHIGRGMYYGSYFYHHTWNIGVILLFLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEW 164
Cdd:MTH00131  84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 165 VWGGFAVDNATLTRFYSIHFLLPFIIAAMSALHLLFLHETGSNNPLGLNSDGEKVPFHSYYSYKDLVGFIALFIMLSFLA 244
Cdd:MTH00131 164 IWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLA 243

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 245 LFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVASIAILFILPFTHMGKFRSMAFYSLNQI 324
Cdd:MTH00131 244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQF 323

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*
gi 658157647 325 LFWSFIGLFLILTWIGACPVEAPYEQIGQVFTLLYFMYF-ILAPL 368
Cdd:MTH00131 324 LFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFlVLMPL 368
CYTB MTH00191
cytochrome b; Provisional
 5-365 0e+00

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 615.00  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647   5 IRKTHPVLKMANGALVDLPAPSNLSVWWNFGSLLGLCLIIQILTGLFLAMHYTANTDLAFSSVIHISRDVSYGWLLRALH 84
Cdd:MTH00191   1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  85 ANGASWFFICLYLHIGRGMYYGSYFYHHTWNIGVILLFLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEW 164
Cdd:MTH00191  81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 165 VWGGFAVDNATLTRFYSIHFLLPFIIAAMSALHLLFLHETGSNNPLGLNSDGEKVPFHSYYSYKDLVGFIALFIMLSFLA 244
Cdd:MTH00191 161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 245 LFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVASIAILFILPFTHMGKFRSMAFYSLNQI 324
Cdd:MTH00191 241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|.
gi 658157647 325 LFWSFIGLFLILTWIGACPVEAPYEQIGQVFTLLYFMYFIL 365
Cdd:MTH00191 321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLL 361
CYTB MTH00074
cytochrome b; Provisional
 1-379 0e+00

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 611.69  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647   1 MRTPIRKTHPVLKMANGALVDLPAPSNLSVWWNFGSLLGLCLIIQILTGLFLAMHYTANTDLAFSSVIHISRDVSYGWLL 80
Cdd:MTH00074   1 MAHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLM 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  81 RALHANGASWFFICLYLHIGRGMYYGSYFYHHTWNIGVILLFLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160
Cdd:MTH00074  81 RNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDT 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 161 LVEWVWGGFAVDNATLTRFYSIHFLLPFIIAAMSALHLLFLHETGSNNPLGLNSDGEKVPFHSYYSYKDLVGFIALFIML 240
Cdd:MTH00074 161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTAL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 241 SFLALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVASIAILFILPFTHMGKFRSMAFYS 320
Cdd:MTH00074 241 ALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRP 320

                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 321 LNQILFWSFIGLFLILTWIGACPVEAPYEQIGQVFTLLYFMYFILA-PLMQMSWDSLLNF 379
Cdd:MTH00074 321 LTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIiPLTGWLENKLLKW 380
CYTB MTH00100
cytochrome b; Provisional
 3-379 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 598.16  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647   3 TPIRKTHPVLKMANGALVDLPAPSNLSVWWNFGSLLGLCLIIQILTGLFLAMHYTANTDLAFSSVIHISRDVSYGWLLRA 82
Cdd:MTH00100   2 TNIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRY 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  83 LHANGASWFFICLYLHIGRGMYYGSYFYHHTWNIGVILLFLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLV 162
Cdd:MTH00100  82 LHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLV 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 163 EWVWGGFAVDNATLTRFYSIHFLLPFIIAAMSALHLLFLHETGSNNPLGLNSDGEKVPFHSYYSYKDLVGFIALFIMLSF 242
Cdd:MTH00100 162 EWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLML 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 243 LALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVASIAILFILPFTHMGKFRSMAFYSLN 322
Cdd:MTH00100 242 LVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLS 321

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 658157647 323 QILFWSFIGLFLILTWIGACPVEAPYEQIGQVFTLLYFMYF-ILAPLMQMSWDSLLNF 379
Cdd:MTH00100 322 QCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIIlILMPIASLIENNLLKW 379
CYTB MTH00034
cytochrome b; Validated
 4-366 0e+00

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 584.36  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647   4 PIRKTHPVLKMANGALVDLPAPSNLSVWWNFGSLLGLCLIIQILTGLFLAMHYTANTDLAFSSVIHISRDVSYGWLLRAL 83
Cdd:MTH00034   3 PLRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNI 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  84 HANGASWFFICLYLHIGRGMYYGSYFYHHTWNIGVILLFLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVE 163
Cdd:MTH00034  83 HANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQ 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 164 WVWGGFAVDNATLTRFYSIHFLLPFIIAAMSALHLLFLHETGSNNPLGLNSDGEKVPFHSYYSYKDLVGFIALFIMLSFL 243
Cdd:MTH00034 163 WIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSL 242

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 244 ALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVASIAILFILPFTHMGKFRSMAFYSLNQ 323
Cdd:MTH00034 243 ALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQ 322

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|...
gi 658157647 324 ILFWSFIGLFLILTWIGACPVEAPYEQIGQVFTLLYFMYFILA 366
Cdd:MTH00034 323 IAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFF 365
CYTB MTH00224
cytochrome b; Provisional
 1-378 0e+00

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 551.83  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647   1 MRTPIRKTHPVLKMANGALVDLPAPSNLSVWWNFGSLLGLCLIIQILTGLFLAMHYTANTDLAFSSVIHISRDVSYGWLL 80
Cdd:MTH00224   1 MFKPFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  81 RALHANGASWFFICLYLHIGRGMYYGSYFYHHTWNIGVILLFLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160
Cdd:MTH00224  81 RSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKD 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 161 LVEWVWGGFAVDNATLTRFYSIHFLLPFIIAAMSALHLLFLHETGSNNPLGLNSDGEKVPFHSYYSYKDLVGFIALFIML 240
Cdd:MTH00224 161 LVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 241 SFLALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVASIAILFILPFTHMGKFRSMAFYS 320
Cdd:MTH00224 241 SLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYP 320

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 658157647 321 LNQILFWSFIGLFLILTWIGACPVEAPYEQIGQVFTLLYFMYFILAPLMQMSWDSLLN 378
Cdd:MTH00224 321 LNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFIISPAISKLWDDLLN 378
CYTB MTH00022
cytochrome b; Validated
 4-369 0e+00

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 511.17  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647   4 PIRKTHPVLKMANGALVDLPAPSNLSVWWNFGSLLGLCLIIQILTGLFLAMHYTANTDLAFSSVIHISRDVSYGWLLRAL 83
Cdd:MTH00022   2 PLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  84 HANGASWFFICLYLHIGRGMYYGSYFYHHTWNIGVILLFLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVE 163
Cdd:MTH00022  82 HANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQ 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 164 WVWGGFAVDNATLTRFYSIHFLLPFIIAAMSALHLLFLHETGSNNPLGLNSDGEKVPFHSYYSYKDLVGFIALFIMLSFL 243
Cdd:MTH00022 162 WVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFI 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 244 ALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVASIAILFILPFTHMGKFRSMAFYSLNQ 323
Cdd:MTH00022 242 VYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGR 321

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*..
gi 658157647 324 ILFWSFIGLFLILTWIGACPVEAPYEQIGQVFTLLYFMYF-ILAPLM 369
Cdd:MTH00022 322 MAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFlVLIPLL 368
CYTB MTH00053
cytochrome b; Provisional
 1-378 1.87e-176

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 495.77  E-value: 1.87e-176
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647   1 MRTPIRKTHPVLKMANGALVDLPAPSNLSVWWNFGSLLGLCLIIQILTGLFLAMHYTANTDLAFSSVIHISRDVSYGWLL 80
Cdd:MTH00053   1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFIL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  81 RALHANGASWFFICLYLHIGRGMYYGSYFYHHTWNIGVILLFLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160
Cdd:MTH00053  81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 161 LVEWVWGGFAVDNATLTRFYSIHFLLPFIIAAMSALHLLFLHETGSNNPLGLNSDGEKVPFHSYYSYKDLVGFIALFIML 240
Cdd:MTH00053 161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 241 SFLALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVASIAILFILPFTHMGKFRSMAFYS 320
Cdd:MTH00053 241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRP 320

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 658157647 321 LNQILFWSFIGLFLILTWIGACPVEAPYEQIGQVFTLLYFMYF-ILAPLMQMSWDSLLN 378
Cdd:MTH00053 321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFlILMPLAGYLENKLLK 379
CYTB MTH00033
cytochrome b; Provisional
 19-369 1.78e-133

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 386.99  E-value: 1.78e-133
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  19 LVDLPAPSNLSVWWNFGSLLGLCLIIQILTGLFLAMHYTANTDLAFSSVIHISRDVSYGWLLRALHANGASWFFICLYLH 98
Cdd:MTH00033  15 IIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCH 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  99 IGRGMYYGSYFYHHTWNIGVILLFLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFAVDNATLTR 178
Cdd:MTH00033  95 IGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNR 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 179 FYSIHFLLPFIIAAMSALHLLFLHETGSNNPLGLNSDGEKVPFHSYYSYKDLVGFIALFIMLSFLALFS--PQLLTDPEN 256
Cdd:MTH00033 175 FFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEPriETLLQDPEN 254

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 257 FIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVASIAILFILPFTHMGKFRSMAFYSLNQILFWSFIGLFLIL 336
Cdd:MTH00033 255 FIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFIIL 334

                        330       340       350
                 ....*....|....*....|....*....|....*
gi 658157647 337 TWIGACPVEA-PYEQIGQVFTLLYFMYF-ILAPLM 369
Cdd:MTH00033 335 TWIGSAPAGAdPYVLIGRIATIFYFGYFlVLVPLL 369
CYTB MTH00086
cytochrome b; Provisional
 13-371 1.22e-126

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 368.50  E-value: 1.22e-126
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  13 KMANGALVDLPAPSNLSVWWNFGSLLGLCLIIQILTGLFLAMHYTANTDLAFSSVIHISRDVSYGWLLRALHANGASWFF 92
Cdd:MTH00086   1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  93 ICLYLHIGRGMYYGSYFYHHTWNIGVILLFLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFAVD 172
Cdd:MTH00086  81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 173 NATLTRFYSIHFLLPFIIAAMSALHLLFLHETGSNNPLGLNSDGEKVPFHSYYSYKDLVGFIALFIMLSFlALFSPQLLT 252
Cdd:MTH00086 161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIFWLVFIIF-SLFYPFNLG 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 253 DPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVASIAILFILPFThmgKFRSMAFYSLNQILFWSFIGL 332
Cdd:MTH00086 240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFV---NNYTSCLNKLNKFLVFSFIVV 316

                        330       340       350
                 ....*....|....*....|....*....|....*....
gi 658157647 333 FLILTWIGACPVEAPYEQIGQVFTLLYFMYFILAPLMQM 371
Cdd:MTH00086 317 NVILSWLGQCLVEYPFLFLSQIFSFIYFFLILLMLFLFY 355
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
23-366 9.74e-125

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 364.88  E-value: 9.74e-125
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  23 PAPSNLSVWWNFGSLLGLCLIIQILTGLFLAMHYTANTDLAFSSVIHISRDVSYGWLLRALHANGASWFFICLYLHIGRG 102
Cdd:COG1290   31 PFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRG 110

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 103 MYYGSYFYHH--TWNIGVILLFLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFAVDNATLTRFY 180
Cdd:COG1290  111 FFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFF 190

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 181 SIH-FLLPFIIAAMSALHLLFLHETGSNNPLGLNSDGEK----VPFHSYYSYKDLVGFIALFIMLSFLALFSPQLltDPE 255
Cdd:COG1290  191 ALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFVFLGVFALLAFFFPIN--PPP 268

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 256 NFIPANPLVTPVHIQPEWYFLFAYAILRSIP--NKLGGVIGLVASIAILFILPFTHMGKFRSMAFYSLNQILFWSFIGLF 333
Cdd:COG1290  269 NYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFF 348

                        330       340       350
                 ....*....|....*....|....*....|...
gi 658157647 334 LILTWIGACPVeaPYEQIGQVFTLLYFMYFILA 366
Cdd:COG1290  349 IVLTILGANPP--IATLLGSINTVTYFAFFLIV 379
CYTB MTH00046
cytochrome b; Validated
 12-358 1.28e-95

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 289.19  E-value: 1.28e-95
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  12 LKMANGALVDLPAPSNLSVWWNFGSLLGLCLIIQILTGLFLAMHYTANTDLAFSSVIHISRDVSYGWLLRALHANGASWF 91
Cdd:MTH00046   2 ISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  92 FICLYLHIGRGMYYGSYFYHHTWNIGVILLFLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFAV 171
Cdd:MTH00046  82 FILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSV 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 172 DNATLTRFYSIHFLLPFIIAAMSALHLLFLHETGSNNPLGL-NSDGEKVPFHSYYSYKDLVGFIALFIMLSFLALFSPQL 250
Cdd:MTH00046 162 TGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDL 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 251 LTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGgviGLVASIAILFILPFTHMGKfrSMAFYSLNQILFWSFI 330
Cdd:MTH00046 242 VLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIG---GLVLVLSFLFFLWVPTFNG--SSVYSVWRQVNFWLIV 316

                        330       340
                 ....*....|....*....|....*...
gi 658157647 331 GLFLILTWIGACPVEAPYEQIGQVFTLL 358
Cdd:MTH00046 317 SLFFSLSYLGGCHPEYPYLLISQLFSVL 344
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 10-207 1.40e-87

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 263.07  E-value: 1.40e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  10 PVLKMANGALVDLPAPSNLSVWWNFGSLLGLCLIIQILTGLFLAMHYTANTDLAFSSVIHISRDVSYGWLLRALHANGAS 89
Cdd:cd00284    1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  90 WFFICLYLHIGRGMYYGSYFYHH--TWNIGVILLFLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWG 167
Cdd:cd00284   81 MFFLMLYLHIFRGLYYGSYKKPRelTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 658157647 168 GFAVDNATLTRFYSIHFLLPFIIAAMSALHLLFLHETGSN 207
Cdd:cd00284  161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
19-205 1.87e-80

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 244.60  E-value: 1.87e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647   19 LVDLPAPSNLSVWWNFGSLLGLCLIIQILTGLFLAMHYTANTDLAFSSVIHISRDVSYGWLLRALHANGASWFFICLYLH 98
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647   99 IGRGMYYGSYFYHH--TWNIGVILLFLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFAVDNATL 176
Cdd:pfam00033  81 IFRGLYYGGFSYPRelTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 658157647  177 TRFYSIHFLLPFIIAAMSALHLLFLHETG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytochrome_b_C cd00290
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 208-355 1.20e-48

Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.


Pssm-ID: 238179 [Multi-domain]  Cd Length: 147  Bit Score: 161.27  E-value: 1.20e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 208 NPLGLNSDGEKVPFHSYYSYKDLVGFIALFIMLSFLALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPN 287
Cdd:cd00290    1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 658157647 288 KLGGVIGLVASIAILFILPFTHMGKFRSMaFYSLNQILFWSFIGLFLILTWIGACPVEAPYEQIGQVF 355
Cdd:cd00290   81 KLLGVLAMAASILSLFLVPFLENSNKRSQ-FRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
91-254 1.59e-43

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 148.93  E-value: 1.59e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647   91 FFICLYLHIGRGMYYGSYFY--HHTWNIGVILLFLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGG 168
Cdd:pfam13631   3 FIAAIYVHMLRIFFTGAYRKprELNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLFGG 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  169 FAVDNATLTRFYSIHF-LLPFIIAAMSALHLLFLHETGSNNPLGLNSDGEKVPFHSYYSYKDLVGFIALFIMLSFLALFS 247
Cdd:pfam13631  83 PFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQIN 162


                  ....*..
gi 658157647  248 PQLLTDP 254
Cdd:pfam13631 163 PIWLGGP 169
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
259-359 1.13e-42

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 144.16  E-value: 1.13e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  259 PANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVASIAILFILPFTHMGKFRSMAFYSLNQILFWSFIGLFLILTW 338
Cdd:pfam00032   1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80

                          90       100
                  ....*....|....*....|.
gi 658157647  339 IGACPVEAPYEQIGQVFTLLY 359
Cdd:pfam00032  81 LGKQPPTGPYTLLGQIATVYY 101
PRK03735 PRK03735
cytochrome b6; Provisional
 23-210 1.53e-38

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 137.54  E-value: 1.53e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  23 PAPSNLSVWWNFGSLLGLCLIIQILTGLFLAMHYTANTDLAFSSVIHISRDVSYGWLLRALHANGASWFFICLYLHIGRG 102
Cdd:PRK03735  33 PAHHFSAFVYCFGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRV 112

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 103 MYYGSYFYHH--TWNIGVILLFLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFAVDNATLTRFY 180
Cdd:PRK03735 113 FFTGGYKKPRelNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFF 192

                        170       180       190
                 ....*....|....*....|....*....|.
gi 658157647 181 SIH-FLLPFIIAAMSALHLLFLHETGSNNPL 210
Cdd:PRK03735 193 AIHvFFLPWALAVLMLAHFLMIRKQGISGPL 223
petB CHL00070
cytochrome b6
 25-210 5.86e-33

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 122.52  E-value: 5.86e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  25 PSNLSVWWNFGSLLGLCLIIQILTGLFLAMHYTANTDLAFSSVIHISRDVSYGWLLRALHANGASWFFICLYLHIGRGMY 104
Cdd:CHL00070  27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647 105 YGSYFYHH--TWNIGVILLFLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFAVDNATLTRFYSI 182
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186

                        170       180
                 ....*....|....*....|....*....
gi 658157647 183 H-FLLPFIIAAMSALHLLFLHETGSNNPL 210
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
petD CHL00058
cytochrome b6/f complex subunit IV
 259-307 3.06e-10

cytochrome b6/f complex subunit IV


Pssm-ID: 176998  Cd Length: 160  Bit Score: 58.47  E-value: 3.06e-10
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*....
gi 658157647 259 PANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVASIAILFILPF 307
Cdd:CHL00058  65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPF 113
PetD COG5679
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ...
 230-307 7.15e-10

Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];


Pssm-ID: 444393 [Multi-domain]  Cd Length: 161  Bit Score: 57.50  E-value: 7.15e-10
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 658157647 230 LVGFIALFIMLsflALFSPQLLTDPenfipANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVASIAILFILPF 307
Cdd:COG5679   45 ILGTIALCIGL---AVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPF 114
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 222-307 2.00e-09

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 55.96  E-value: 2.00e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 658157647  222 HSYYSY----KDLVGFIALFIMLSF-----LALFSPQLLTDPenfipANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGV 292
Cdd:TIGR01156  24 HNYYGEpawpNDLLYIFPVVILGTIacvvgLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGV 98

                          90
                  ....*....|....*
gi 658157647  293 IGLVASIAILFILPF 307
Cdd:TIGR01156  99 LLMAAVPAGLLTVPF 113
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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