|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10459 |
PRK10459 |
MOP flippase family protein; |
2-471 |
0e+00 |
|
MOP flippase family protein;
Pssm-ID: 236697 [Multi-domain] Cd Length: 492 Bit Score: 622.05 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 2 PSITKQIMSGAKWTSISTMCITIIQIVQFALLGNMMTLTEFGLVGMITTVTVFAQIVLDMGFGAALIQRDDATERQLSTL 81
Cdd:PRK10459 1 MSLREKTISGAKWTAISTVIIIGLQLVQLTVLARILDNHQFGLLTMSLVIIGFADTLSDMGIGASIIQRQDISHLQLSTL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 82 YWLNIMTGVLLFVLLYVSSPVIAGFYQREELVFLVRILAIMFLIAPIGQQYQYMLQKQLHFNTLSKIEIFSNVLSFGYLA 161
Cdd:PRK10459 81 YWLNVGLGIVVFVLVFLLSPLIADFYHNPELAPLIKTLSLAFVIIPIGQQFRALLQKELEFNKLAKIEISAVVAGFTFAV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 162 IAVFMMDAILAYVISQVLLQSSKGILYWAVYRKKWHPAFVFDLRGMKDFFSFGAFQLSSRLVNRLGANIDMILIGRFIGA 241
Cdd:PRK10459 161 VSAFFWPGALAAILGYLVNSSVRTLLFGYFGRKIYRPALHFSLASVKPNLSFGAWQTAERIINYLNTNIDTILIGRILGA 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 242 EALGIYNLAYQIVTIPVLKINPIVTRVAFPIFAKNKYENSVIREGFLNMTKMLALVSFPLLIGLVSVSDAFITAVFGEKW 321
Cdd:PRK10459 241 EVLGGYNLAYNVATVPPMKINPIITRVAFPVFAKIQDDTEKLRVGFLKLLSVLGIINFPLLLGLMVVSNNFVPLVFGEKW 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 322 LAAVPILNVLAIVGILRVLMNPNGSVLLAKGRADLAFYWDSGVLLLYGLSLFAAVQTGSLLTVAWVYAIISVVNFLIGRW 401
Cdd:PRK10459 321 NSAIPILQLLCIVGLLRSVGNPIGSLLLAKGRADLSFKWNVFKTFLFIPAIVIGGQLAGLIGVALGFLLVQIINTILSYF 400
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 728887178 402 LLAY-VIKLNLSAYFQSIMKPFLITAAMGIIAFGVSLSTEHfSMQAEMRLAISVAAGALCYLFLLVKAYPQ 471
Cdd:PRK10459 401 LMIKpVIGLSYRQYILSIWKPFYLSLPMLIVSYGLGLLLKG-HLALGMLLAVQVAAGVLAYLLMIVLSRHA 470
|
|
| MATE_tuaB_like |
cd13127 |
Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins; This ... |
8-415 |
9.51e-115 |
|
Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins; This family might function as a translocase for lipopolysaccharides and participate in the biosynthesis of cell wall components such as teichuronic acid. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.
Pssm-ID: 240532 [Multi-domain] Cd Length: 406 Bit Score: 343.70 E-value: 9.51e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 8 IMSGAKWTSISTMCITIIQIVQFALLGNMMTLTEFGLVGMITTVTVFAQIVLDMGFGAALIQRDDATERQLSTLYWLNIM 87
Cdd:cd13127 1 AVSGAFWSAISQVVVQLLQFVVTIILARLLTPEDFGLVAMATVFIAFAQLFSDLGLSSALIQRKDLTEEDLSTVFWLNLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 88 TGVLLFVLLYVSSPVIAGFYQREELVFLVRILAIMFLIAPIGQQYQYMLQKQLHFNTLSKIEIFSNVLSFGYLAIAVFMM 167
Cdd:cd13127 81 LGLLLYLLLFLLAPLIAAFYNEPELIPLLRVLSLSFLLSGLGSVPRALLQRELRFKKLAIIELISTLVSGVVAIVLALLG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 168 DAILAYVISQVLLQSSKGILYWAVYRkkWHPAFVFDLRGMKDFFSFGAFQLSSRLVNRLGANIDMILIGRFIGAEALGIY 247
Cdd:cd13127 161 FGVWALVAQQLVGALVSTVLLWILSR--WRPRLSFSLASLKELLSFGSKLLGSNLLNYFSRNLDNLIIGKFLGAAALGYY 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 248 NLAYQIVTIPVLKINPIVTRVAFPIFAKNKYENSVIREGFLNMTKMLALVSFPLLIGLVSVSDAFITAVFGEKWLAAVPI 327
Cdd:cd13127 239 SRAYRLALLPVQNITGPITRVLFPALSRLQDDPERLRRAYLKALRLLALITFPLMVGLALLAEPLVLLLLGEKWLPAVPI 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 328 LNVLAIVGILRVLMNPNGSVLLAKGRADLAFYWDSGVLLLYGLSLFAAVQTGsLLTVAWVYAIISVVNFLIGRWLLAYVI 407
Cdd:cd13127 319 LQILALAGLFQPLSSLNGSLLLALGRTDLLLKLGLIKAVLTVLALLIGIPYG-IIGVAIAYVIASLLSFPLNLYLAGRLI 397
|
....*...
gi 728887178 408 KLNLSAYF 415
Cdd:cd13127 398 GISLLELL 405
|
|
| Polysacc_synt_3 |
pfam13440 |
Polysaccharide biosynthesis protein; |
41-326 |
2.24e-62 |
|
Polysaccharide biosynthesis protein;
Pssm-ID: 404342 [Multi-domain] Cd Length: 293 Bit Score: 204.75 E-value: 2.24e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 41 EFGLVGMITTVTVFAQIVLDMGFGAALIQRDDATERQLSTLYWLNIMTGVLLFVLLYVSSPVIAGFYQREELVFLVRILA 120
Cdd:pfam13440 10 DFGVVAIATVVISFANIFVDMGFSSALIQKKDITETDYSTVFTFNLIFGALIYLILFALAPLIASFYNQPELVPVLRVLA 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 121 IMFLIAPIGQQYQYMLQKQLHFNTLSKIEIFSNVLSFGYLAIAVFMMDAILAYVISQVLLQSSKGILYWavYRKKWHPAF 200
Cdd:pfam13440 90 LVLILNGLSSVQTALLRRDLRFKKLFKITLTSSVIGGIVGIVLAYLGFGVWALVIGTLAQQLLSLVLLW--LASDWRPRL 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 201 VFDLRGMKDFFSFGAFQLSSRLVNRLGANIDMILIGRFIGAEALGIYNLAYQIVTIPVLKINPIVTRVAFPIFAKNKYEN 280
Cdd:pfam13440 168 TFSLKVIKELFSFGSWLLLSNLLNYLARNLDNLIIGKVLGTAALGLYSVAYRLALLPTANITSVITKVLFPALSRIQDDK 247
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 728887178 281 SVIREGFLNMTKMLALVSFPLLIGLVSVSDAFITAVFGEKWLAAVP 326
Cdd:pfam13440 248 AKLRELYLRVLRLIAFIVFPIMAGLAVVAEPLVLVLLGSQWLESVP 293
|
|
| RfbX |
COG2244 |
Membrane protein involved in the export of O-antigen and teichoic acid [Cell wall/membrane ... |
6-398 |
8.60e-34 |
|
Membrane protein involved in the export of O-antigen and teichoic acid [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 441845 [Multi-domain] Cd Length: 366 Bit Score: 130.84 E-value: 8.60e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 6 KQIMSGAKWTSISTMCITIIQIVQFALLGNMMTLTEFGLVGMITTVTVFAQIVLDMGFGAALIQ-----RDDATERQLST 80
Cdd:COG2244 2 KKLLKNTLWLLLGQLLGALLGFLLLPLLARLLGPEEYGLFALALSIVALLSVLADLGLSTALVRfiaeyREEELRRLLST 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 81 LYWLNIMTGVLLFVLLYVSSPVIAGFYQREELVFLVRILAIMFLIAPIGQQYQYMLQKQLHFNTLSKIEIFSNVLSFGYL 160
Cdd:COG2244 82 ALLLRLLLSLLLALLLLLLAPFIAALLGEPELALLLLLLALALLLSALSAVLLALLRGLERFKLLALINILSSLLSLLLA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 161 AIAVFMMDAILAYVisqvllqsskgilywavyrkkwhpafvfdlrgmkdfFSFGAFQLSSRLVNRLGANIDMILIGRFIG 240
Cdd:COG2244 162 LLLALLGLGLWGLV------------------------------------LKYSLPLLLSGLLGLLLTNLDRLLLGALLG 205
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 241 AEALGIYNLAYQIVTIPVLkINPIVTRVAFPIFAKNKYENSV--IREGFLNMTKMLALVSFPLLIGLVSVSDAFITAVFG 318
Cdd:COG2244 206 PAAVGIYSAAYRLASLLLL-LITALSQVLFPRLSRLLAEGDReeLRRLYRKALRLLLLLGLPLALGLALLAPPLLSLLFG 284
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 319 EKWLAAVPILNVLAIVGILRVLMNPNGSVLLAKGRADLAFYWDSGVLLLYGLSLFAAVQTGSLLTVAWVYAIISVVNFLI 398
Cdd:COG2244 285 PEYAEAAPVLPILALGALFLALSGVLSNLLLALGRTRLLLIISLIGAVLNLVLNLLLIPRYGLVGAAIATLLSYLVLLLL 364
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10459 |
PRK10459 |
MOP flippase family protein; |
2-471 |
0e+00 |
|
MOP flippase family protein;
Pssm-ID: 236697 [Multi-domain] Cd Length: 492 Bit Score: 622.05 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 2 PSITKQIMSGAKWTSISTMCITIIQIVQFALLGNMMTLTEFGLVGMITTVTVFAQIVLDMGFGAALIQRDDATERQLSTL 81
Cdd:PRK10459 1 MSLREKTISGAKWTAISTVIIIGLQLVQLTVLARILDNHQFGLLTMSLVIIGFADTLSDMGIGASIIQRQDISHLQLSTL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 82 YWLNIMTGVLLFVLLYVSSPVIAGFYQREELVFLVRILAIMFLIAPIGQQYQYMLQKQLHFNTLSKIEIFSNVLSFGYLA 161
Cdd:PRK10459 81 YWLNVGLGIVVFVLVFLLSPLIADFYHNPELAPLIKTLSLAFVIIPIGQQFRALLQKELEFNKLAKIEISAVVAGFTFAV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 162 IAVFMMDAILAYVISQVLLQSSKGILYWAVYRKKWHPAFVFDLRGMKDFFSFGAFQLSSRLVNRLGANIDMILIGRFIGA 241
Cdd:PRK10459 161 VSAFFWPGALAAILGYLVNSSVRTLLFGYFGRKIYRPALHFSLASVKPNLSFGAWQTAERIINYLNTNIDTILIGRILGA 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 242 EALGIYNLAYQIVTIPVLKINPIVTRVAFPIFAKNKYENSVIREGFLNMTKMLALVSFPLLIGLVSVSDAFITAVFGEKW 321
Cdd:PRK10459 241 EVLGGYNLAYNVATVPPMKINPIITRVAFPVFAKIQDDTEKLRVGFLKLLSVLGIINFPLLLGLMVVSNNFVPLVFGEKW 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 322 LAAVPILNVLAIVGILRVLMNPNGSVLLAKGRADLAFYWDSGVLLLYGLSLFAAVQTGSLLTVAWVYAIISVVNFLIGRW 401
Cdd:PRK10459 321 NSAIPILQLLCIVGLLRSVGNPIGSLLLAKGRADLSFKWNVFKTFLFIPAIVIGGQLAGLIGVALGFLLVQIINTILSYF 400
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 728887178 402 LLAY-VIKLNLSAYFQSIMKPFLITAAMGIIAFGVSLSTEHfSMQAEMRLAISVAAGALCYLFLLVKAYPQ 471
Cdd:PRK10459 401 LMIKpVIGLSYRQYILSIWKPFYLSLPMLIVSYGLGLLLKG-HLALGMLLAVQVAAGVLAYLLMIVLSRHA 470
|
|
| MATE_tuaB_like |
cd13127 |
Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins; This ... |
8-415 |
9.51e-115 |
|
Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins; This family might function as a translocase for lipopolysaccharides and participate in the biosynthesis of cell wall components such as teichuronic acid. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.
Pssm-ID: 240532 [Multi-domain] Cd Length: 406 Bit Score: 343.70 E-value: 9.51e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 8 IMSGAKWTSISTMCITIIQIVQFALLGNMMTLTEFGLVGMITTVTVFAQIVLDMGFGAALIQRDDATERQLSTLYWLNIM 87
Cdd:cd13127 1 AVSGAFWSAISQVVVQLLQFVVTIILARLLTPEDFGLVAMATVFIAFAQLFSDLGLSSALIQRKDLTEEDLSTVFWLNLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 88 TGVLLFVLLYVSSPVIAGFYQREELVFLVRILAIMFLIAPIGQQYQYMLQKQLHFNTLSKIEIFSNVLSFGYLAIAVFMM 167
Cdd:cd13127 81 LGLLLYLLLFLLAPLIAAFYNEPELIPLLRVLSLSFLLSGLGSVPRALLQRELRFKKLAIIELISTLVSGVVAIVLALLG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 168 DAILAYVISQVLLQSSKGILYWAVYRkkWHPAFVFDLRGMKDFFSFGAFQLSSRLVNRLGANIDMILIGRFIGAEALGIY 247
Cdd:cd13127 161 FGVWALVAQQLVGALVSTVLLWILSR--WRPRLSFSLASLKELLSFGSKLLGSNLLNYFSRNLDNLIIGKFLGAAALGYY 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 248 NLAYQIVTIPVLKINPIVTRVAFPIFAKNKYENSVIREGFLNMTKMLALVSFPLLIGLVSVSDAFITAVFGEKWLAAVPI 327
Cdd:cd13127 239 SRAYRLALLPVQNITGPITRVLFPALSRLQDDPERLRRAYLKALRLLALITFPLMVGLALLAEPLVLLLLGEKWLPAVPI 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 328 LNVLAIVGILRVLMNPNGSVLLAKGRADLAFYWDSGVLLLYGLSLFAAVQTGsLLTVAWVYAIISVVNFLIGRWLLAYVI 407
Cdd:cd13127 319 LQILALAGLFQPLSSLNGSLLLALGRTDLLLKLGLIKAVLTVLALLIGIPYG-IIGVAIAYVIASLLSFPLNLYLAGRLI 397
|
....*...
gi 728887178 408 KLNLSAYF 415
Cdd:cd13127 398 GISLLELL 405
|
|
| Polysacc_synt_3 |
pfam13440 |
Polysaccharide biosynthesis protein; |
41-326 |
2.24e-62 |
|
Polysaccharide biosynthesis protein;
Pssm-ID: 404342 [Multi-domain] Cd Length: 293 Bit Score: 204.75 E-value: 2.24e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 41 EFGLVGMITTVTVFAQIVLDMGFGAALIQRDDATERQLSTLYWLNIMTGVLLFVLLYVSSPVIAGFYQREELVFLVRILA 120
Cdd:pfam13440 10 DFGVVAIATVVISFANIFVDMGFSSALIQKKDITETDYSTVFTFNLIFGALIYLILFALAPLIASFYNQPELVPVLRVLA 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 121 IMFLIAPIGQQYQYMLQKQLHFNTLSKIEIFSNVLSFGYLAIAVFMMDAILAYVISQVLLQSSKGILYWavYRKKWHPAF 200
Cdd:pfam13440 90 LVLILNGLSSVQTALLRRDLRFKKLFKITLTSSVIGGIVGIVLAYLGFGVWALVIGTLAQQLLSLVLLW--LASDWRPRL 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 201 VFDLRGMKDFFSFGAFQLSSRLVNRLGANIDMILIGRFIGAEALGIYNLAYQIVTIPVLKINPIVTRVAFPIFAKNKYEN 280
Cdd:pfam13440 168 TFSLKVIKELFSFGSWLLLSNLLNYLARNLDNLIIGKVLGTAALGLYSVAYRLALLPTANITSVITKVLFPALSRIQDDK 247
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 728887178 281 SVIREGFLNMTKMLALVSFPLLIGLVSVSDAFITAVFGEKWLAAVP 326
Cdd:pfam13440 248 AKLRELYLRVLRLIAFIVFPIMAGLAVVAEPLVLVLLGSQWLESVP 293
|
|
| Polysacc_synt |
pfam01943 |
Polysaccharide biosynthesis protein; Members of this family are integral membrane proteins. ... |
11-277 |
6.82e-55 |
|
Polysaccharide biosynthesis protein; Members of this family are integral membrane proteins. Many members of the family are implicated in production of polysaccharide. The family includes RfbX part of the O antigen biosynthesis operon. The family includes SpoVB from Bacillus subtilis, which is involved in spore cortex biosynthesis.
Pssm-ID: 426523 [Multi-domain] Cd Length: 274 Bit Score: 184.81 E-value: 6.82e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 11 GAKWTSISTMCITIIQIVQFALLGNMMTLTEFGLVGMITTVTVFAQIVLDMGFGAALIQRDDAT--ERQLSTLYWLNIMT 88
Cdd:pfam01943 4 NVIVLLLSQLITYLLAFVTLPYLARILGPEGFGLYAFALAFVGLLTIFTDFGFNAALVREIAKYreKYELVSLYWLNALL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 89 GVLLFVLLYVSSPVIAGFYQREELVFLVRILAIMFLIAPIGQQYQYMLQKQLHFNTLSKIEIFSNVLSFG-YLAIAVFMM 167
Cdd:pfam01943 84 VKLVLVLLFLLLPLIAAFLGLPELAVLYRILALMFLLLPGVVQFRRGLFQGLERMKYALISQIVESLSRViLVFIAVFLP 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 168 DAILAYVISQVLLQSSKGILYWAVYRKKWHPAFVF-DLRGMKDFFSFGAFQLSSRLVNRLGANIDMILIGRFIGAEALGI 246
Cdd:pfam01943 164 GDIVAALLYQVLAALVGGIIALAVLRKIFRPRFVFpSLKLVRKLLSFGAPLFISSLAISLYTYIDSILLGLLLGAGAVGI 243
|
250 260 270
....*....|....*....|....*....|.
gi 728887178 247 YNLAYQIVTIPVLKINPIVTRVAFPIFAKNK 277
Cdd:pfam01943 244 YNAAYQLLVAIQGLLNPIVTAVLFPVFSKLQ 274
|
|
| RfbX |
COG2244 |
Membrane protein involved in the export of O-antigen and teichoic acid [Cell wall/membrane ... |
6-398 |
8.60e-34 |
|
Membrane protein involved in the export of O-antigen and teichoic acid [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 441845 [Multi-domain] Cd Length: 366 Bit Score: 130.84 E-value: 8.60e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 6 KQIMSGAKWTSISTMCITIIQIVQFALLGNMMTLTEFGLVGMITTVTVFAQIVLDMGFGAALIQ-----RDDATERQLST 80
Cdd:COG2244 2 KKLLKNTLWLLLGQLLGALLGFLLLPLLARLLGPEEYGLFALALSIVALLSVLADLGLSTALVRfiaeyREEELRRLLST 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 81 LYWLNIMTGVLLFVLLYVSSPVIAGFYQREELVFLVRILAIMFLIAPIGQQYQYMLQKQLHFNTLSKIEIFSNVLSFGYL 160
Cdd:COG2244 82 ALLLRLLLSLLLALLLLLLAPFIAALLGEPELALLLLLLALALLLSALSAVLLALLRGLERFKLLALINILSSLLSLLLA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 161 AIAVFMMDAILAYVisqvllqsskgilywavyrkkwhpafvfdlrgmkdfFSFGAFQLSSRLVNRLGANIDMILIGRFIG 240
Cdd:COG2244 162 LLLALLGLGLWGLV------------------------------------LKYSLPLLLSGLLGLLLTNLDRLLLGALLG 205
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 241 AEALGIYNLAYQIVTIPVLkINPIVTRVAFPIFAKNKYENSV--IREGFLNMTKMLALVSFPLLIGLVSVSDAFITAVFG 318
Cdd:COG2244 206 PAAVGIYSAAYRLASLLLL-LITALSQVLFPRLSRLLAEGDReeLRRLYRKALRLLLLLGLPLALGLALLAPPLLSLLFG 284
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 319 EKWLAAVPILNVLAIVGILRVLMNPNGSVLLAKGRADLAFYWDSGVLLLYGLSLFAAVQTGSLLTVAWVYAIISVVNFLI 398
Cdd:COG2244 285 PEYAEAAPVLPILALGALFLALSGVLSNLLLALGRTRLLLIISLIGAVLNLVLNLLLIPRYGLVGAAIATLLSYLVLLLL 364
|
|
| MATE_Wzx_like |
cd13128 |
Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins; ... |
8-359 |
5.23e-28 |
|
Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins; Escherichia coli Wzx and related proteins from other gram-negative bacteria are thought to act as flippases, assisting in the membrane translocation of lipopolysaccharides including those containing O-antigens. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).
Pssm-ID: 240533 [Multi-domain] Cd Length: 402 Bit Score: 115.33 E-value: 5.23e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 8 IMSGAKWTSISTMCITIIQIVQFALLGNMMTLTEFGLVGMITTVTVFAQIVLDMGFGAALIQ-----RDDATERQLSTLY 82
Cdd:cd13128 1 LAKNSGWLFVGNIISKLLGFLVRVYLARYLGPEGFGILSLALAFVGLFSIFADLGLPTALVReiaryRKEKIREIISTSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 83 WLNIMTGVLLFVLLYVSSPVIAGFYqrEELVFLVRILAIMFLIAPIGQQYQYMLQKQLHFNTLSKIEIFSNVLSFGYLAI 162
Cdd:cd13128 81 VLKLILGILALLLLFLFAFLIAFYD--PELVLLLYILALSLPFSALNSLFRGIFQGFEKMKYIVIARIIESVLSLILALI 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 163 AVFM----MDAILAYVISQVLlqSSKGILYWAVYRKKWHPAFVFDLRGMKDFFSFGAFQLSSRLVNRLGANIDMILIGRF 238
Cdd:cd13128 159 LVLLggglIGFALAYLIASVL--SAILLLYIYRKKILLPKFFSFDLKLAKELLRFSIPLALSGIFSLIYTRIDTIMLGYF 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 239 IGAEALGIYNLAYQIVTIPVLKINPIVTrVAFPIFAKNKYENSV-IREGFLNMTKMLALVSFPLLIGLVSVSDAFITAVF 317
Cdd:cd13128 237 LGDAAVGIYNAAYRIAELLLFIPSAIST-ALFPRISELYKNDKDeLKKLLKKSFKYLFLISLPIAIGLFLFAEPIITLLF 315
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 728887178 318 GEKWLAAVPILNVLAIVGILRVLMNPNGSVLLAKGRADLAFY 359
Cdd:cd13128 316 GEEYLPAALVLQILAWGFLFIFLNGIFGSILQAIGKQKLTLK 357
|
|
| MATE_like |
cd12082 |
Multidrug and toxic compound extrusion family and similar proteins; The integral membrane ... |
12-408 |
9.41e-26 |
|
Multidrug and toxic compound extrusion family and similar proteins; The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. MATE has also been identified as a large multigene family in plants, where the proteins are linked to disease resistance. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.
Pssm-ID: 240527 [Multi-domain] Cd Length: 420 Bit Score: 108.95 E-value: 9.41e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 12 AKWTSISTMCITIIQIVQFALLGNMMT--LTEFGLVGMITTVTVFAQIVLDMGFGAALIQRDDATERQ-----LSTLYWL 84
Cdd:cd12082 1 AAPLLLSMLLQTLYNLVDTFFLGRLLGdaLAAVGLAFPLIALLIALGVGLSVGTSALISQAIGAGDEEkarrvLVQSIVL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 85 NIMTGVLLFVLLYVSSPVIAGFYQREELV-----FLVRILAIMFLIAPIGQQYQYMLQKQLHFNTLSKIEIFSNVLSFGY 159
Cdd:cd12082 81 AILLGLLLAALLLFFSPLILSLLGAEEEVielaaTYLTILILGLPITFLGAVLSGILQGEGDTRTAMIISVLSNLLNILL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 160 LAIAVFMM----DAILAYVISQVLLQSSKGILYWAVYRKKWHPAFV------FDLRGMKDFFSFGAFQLSSRLVNRLGAN 229
Cdd:cd12082 161 DPLLIFGLgppeLGIAGAALATVISYVIGALLLLIYLRKGKKILKFklsllkPDLELLRRLLRIGLPSAIQNSLLSLGLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 230 IDMILIGRFIGAEALGIYNLAYQIVTIPVLKINPIVTrVAFPIFAKNKYE--NSVIREGFlNMTKMLALVSFPLLIGLVS 307
Cdd:cd12082 241 IIVAIVAAFGGAAALAAYTVAFRIASLAFMPALGLAQ-AALPVVGQNLGAgnFDRARRIT-WVALLIGLLIGAVLGLLIL 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 308 VSDAFITAVF--GEKWL-AAVPILNVLAIVGILRVLMNPNGSVLLAKGRADLAFYWDsgvLLLYGLSLFAAVQTGSLLTV 384
Cdd:cd12082 319 LFPEPILSLFtnDPEFLeLAVSYLRILAIYYLFVGIGYVLQAGFQAAGRTLKSLIVS---LLSYWVVRLPLAYVLAYLGL 395
|
410 420
....*....|....*....|....*
gi 728887178 385 -AWVYAIISVVNFLIGRWLLAYVIK 408
Cdd:cd12082 396 gLYGIWLALVISLILAALVLLLFFR 420
|
|
| MATE_epsE_like |
cd13129 |
Multidrug and toxic compound extrusion family and similar proteins; This model represents a ... |
31-376 |
2.10e-07 |
|
Multidrug and toxic compound extrusion family and similar proteins; This model represents a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins, including Ralstonia solanaceraum GMI1000 epsE, which may be involved in exporting exopolysaccharide EPS I, a virulence factor. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).
Pssm-ID: 240534 [Multi-domain] Cd Length: 411 Bit Score: 52.88 E-value: 2.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 31 ALLGNMMTLTEFGLVGMITTVTVFAQIVLDMGFGAALIQ-----RDDATER---QLSTLYWLNIMTGVLLFVLLYVSSPV 102
Cdd:cd13129 25 IMVARSLGKHVFGEFGVIQVTIGLLGTFAGFGLGLAATKviaetKDVDPERagrIIGLSILLAVVTGALAATVLFLSATW 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 103 IA-GFYQREELVFLVRILAIMFLIAPIGQQYQYMLQKQLHFNTLSKIEIFSNVLSFGYLAIAVFMMDAILAYVI------ 175
Cdd:cd13129 105 IAiATLNAPHLAELLRIAAIILILTAFTGAQTGFLSGFEAFRAIARVNIWAGLLLLPLMWIGVYIRGLVGAVVIllasaa 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 176 SQVLLQSSKGILYWAVYRKKWHPAFVFDLRGMKDFFSFGAFqLSSRLVNRLGANIDMILIGRFIGAEALGIYNLAYQIVT 255
Cdd:cd13129 185 GNVASNSLILRRECQNQRGPVRTGLTWQELRVLFKFSLPSV-LSGSMGSPVHWIALAILVNQPNGYAELGLFNAANQWRQ 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 256 IPVLKINpIVTRVAFPIFAKNKYEN-SVIREGFLNMTKMLALVSFPLLIGLVSVSDAFItAVFGEKWLAAVPILNVLAIV 334
Cdd:cd13129 264 FITFLPA-TLGNVALPFLAENFGNNeGMFRQTFRSALLFGLGLSLPLGCVFILASQIFA-WLYGKEYGSAAASMRSLAVA 341
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 728887178 335 GILRVLMNPNGSVLLAKGRadlaFYWDSGVLLLYGLSLFAAV 376
Cdd:cd13129 342 AILVGLSVLLGQIIASSGK----IWRGFALNMVWSVIYVAAA 379
|
|
| MurJ |
COG0728 |
Lipid II flippase MurJ/MviN (peptidoglycan biosynthesis) [Cell wall/membrane/envelope ... |
69-466 |
1.62e-06 |
|
Lipid II flippase MurJ/MviN (peptidoglycan biosynthesis) [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440492 [Multi-domain] Cd Length: 503 Bit Score: 50.53 E-value: 1.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 69 QRDDATERQLSTLYWLNIMTGVLLFVLLYVSSPVIAGFY-------QREELVFLVRILAIMFLIAPIGQQYQYMLQKQLH 141
Cdd:COG0728 72 EGEEEARRFASRVLTLLLLVLLVLTLLGILFAPLLVKLLapgfdpeKFALAVALTRIMFPYILFIGLSALLGGVLNARGR 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 142 FNTLSKIEIFSNVLS-FGYLAIAVFMMDAILAYVISQVL---LQSskGILYWAVYRKKWHPAFVFDLR--GMKDFFSFGA 215
Cdd:COG0728 152 FAAPALAPVLLNLVIiAGLLLLAPLFGPGIYALAWGVLLggvLQL--LIQLPALRRLGLRLRPRFDLRdpGVRRVLKLML 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 216 FQLSSRLVNRLGANIDMIlIGRFIGAEALGIYNLAYQIVTIPV-LKINPIVTrVAFPIFAKNKYENSV--IREGFLNMTK 292
Cdd:COG0728 230 PALLGVSVSQINLLVDTI-LASFLPEGSVSALYYADRLYQLPLgLFGVAIGT-ALLPRLSRAAAAGDLeeFRRTLSRGLR 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 293 MLALVSFPLLIGLVSVSDAFITAVFG------EKWLAAVPILNVLAI----VGILRVLMnpngSVLLAKGRADLAFYWDS 362
Cdd:COG0728 308 LVLLLTLPAAVGLIVLAEPIVRLLFErgaftaEDTALTALALAAYALglpaFALVKVLA----RAFYARQDTRTPVRIAV 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 363 GVLLLYGLSLFAAVQTGSLLTVAWVYAIISVVNFLIGRWLLA-YVIKLNLSAYFQSIMKPFLITAAMGIIAFGVSLSTEH 441
Cdd:COG0728 384 IAVVVNIVLNLLLVPPLGHAGLALATSLSALVNALLLLVLLRrRLGGLPLRGILRTLLKLLLASLVMGAVLWLLLRLLGD 463
|
410 420
....*....|....*....|....*....
gi 728887178 442 F----SMQAEMRLAISVAAGALCYLFLLV 466
Cdd:COG0728 464 WlgggLLGRLLALALLILVGAAVYFALLL 492
|
|
| MATE_like_10 |
cd13125 |
Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins; This ... |
42-398 |
2.54e-04 |
|
Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins; This family might function as a translocase for lipopolysaccharides, such as O-antigen. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.
Pssm-ID: 240530 [Multi-domain] Cd Length: 409 Bit Score: 43.30 E-value: 2.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 42 FGLVGMITTVTVFAQIVLDMGFGAALIQ-----RDDATERQ--LSTLYWLNIMTGVLLFVLLYVSSPVIA-GFYQREELV 113
Cdd:cd13125 33 VALLGQLQNFVTILQTIAGGGINNGVVKytaeyKDDEEKLArvWSTAFRITLILSILGGLLLLLFSKPLSsLLFGDIDYS 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 114 FLVRILAIMFLIAPIGQQYQYMLQKQLHFNTLSKIEIFSNVLSFGYLAIAVFMMD---AILAYVISQVLlqsSKGILYWA 190
Cdd:cd13125 113 WVFILLGLALPLFALNNLLLAILNGLKEIKRYALINIISSLIGLLVSVLLVYFYGlkgALLALVLNQSL---IFLVTLIY 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 191 VYRKKW----HPAFVFDLRGMKDFFSFGAFQLSSRLVNRLGANIDMILIGRFIGAEALGIYNLAYQIVTIPVLKINPIVT 266
Cdd:cd13125 190 SRKQPWfklkYLWGRLDKDIIKKLLKFSLMALVSALSLPLSQIIVRNILIRQLGWEAAGYWQAVWKISDVYLGFITTALS 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 728887178 267 RVAFPIFAKNKyENSVIREGFLNMTKMLALVSFPLLIGLVSVSDAFITAVFGEKWLAAVPILNVLAIVGILRVLMNPNGS 346
Cdd:cd13125 270 TYYLPRLSAIK-DNKELKREVNKQLKVILPLVAIGALLIYLLRDLIIQILFSEEFLPARELFLWQLIGDFFKIASWLLGY 348
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 728887178 347 VLLAKGRADLAFYWDSGVLLLYGLSLFAAVQTGSLLTVAWVYAIISVVNFLI 398
Cdd:cd13125 349 ILLAKGMTKLFIITEILFALLFVLLSLLFIPLFGLEGAGIAYAINYILYLIL 400
|
|
| |
