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Conserved domains on  [gi|822674913|gb|AKI05561|]
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cytochrome b, partial (mitochondrion) [Sicista tianschanica]

Protein Classification

cytochrome b( domain architecture ID 11475898)

cytochrome b is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), a respiratory chain that generates an electrochemical potential coupled to ATP synthesis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CYTB MTH00100
cytochrome b; Provisional
 1-366 0e+00

cytochrome b; Provisional


:

Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 741.46  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913   1 PLIKIINDSFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGAS 80
Cdd:MTH00100   9 PLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGAS 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913  81 MFFICLFLHVGRGMYYGSYIFMETWNIGVVLLFAVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 160
Cdd:MTH00100  89 MFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 161 SVDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPIGLDSDADKIPFHPYYTIKDTLGFLLLFLILLTLVLFSPD 240
Cdd:MTH00100 169 SVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPD 248

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 241 LLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILALLPFLHNSKQRSMTFRPISQCMFWVL 320
Cdd:MTH00100 249 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLL 328

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*.
gi 822674913 321 VADLFTLTWIGGQPVEHPFVIIGQIASILYFSIILILLPLSSALEN 366
Cdd:MTH00100 329 VADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIEN 374
 
Name Accession Description Interval E-value
CYTB MTH00100
cytochrome b; Provisional
 1-366 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 741.46  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913   1 PLIKIINDSFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGAS 80
Cdd:MTH00100   9 PLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGAS 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913  81 MFFICLFLHVGRGMYYGSYIFMETWNIGVVLLFAVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 160
Cdd:MTH00100  89 MFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 161 SVDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPIGLDSDADKIPFHPYYTIKDTLGFLLLFLILLTLVLFSPD 240
Cdd:MTH00100 169 SVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPD 248

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 241 LLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILALLPFLHNSKQRSMTFRPISQCMFWVL 320
Cdd:MTH00100 249 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLL 328

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*.
gi 822674913 321 VADLFTLTWIGGQPVEHPFVIIGQIASILYFSIILILLPLSSALEN 366
Cdd:MTH00100 329 VADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIEN 374
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
1-365 1.47e-134

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 389.15  E-value: 1.47e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913   1 PLIKIINDsFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGAS 80
Cdd:COG1290   19 PLASLVRE-HLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGAS 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913  81 MFFICLFLHVGRGMYYGSY-----IfmeTWNIGVVLLFAVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEW 155
Cdd:COG1290   98 LFFAAVYLHMFRGFFYGAYkkpreL---NWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTW 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 156 IWGGFSVDKATLTRFFAFH-FILPFIIAALAMVHLIFLHETGSNNPIGLD----SDADKIPFHPYYTIKDTLGFLLLFLI 230
Cdd:COG1290  175 LFGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPErkktEKVDGVPFHPYYTVKDGFGFFVFLGV 254

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 231 LLTLVLFSPDllGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIP--NKLGGVIALVLSILILALLPFLHNSKQRSMT 308
Cdd:COG1290  255 FALLAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPR 332

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 822674913 309 FRPISQCMFWVLVADLFTLTWIGGQPVehPFVIIGQIASILYFSIILILLPLSSALE 365
Cdd:COG1290  333 YRPVRTALGVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 1-198 2.11e-95

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 282.72  E-value: 2.11e-95
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913   1 PLIKIINDSFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGAS 80
Cdd:cd00284    1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913  81 MFFICLFLHVGRGMYYGSYI--FMETWNIGVVLLFAVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWG 158
Cdd:cd00284   81 MFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 822674913 159 GFSVDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSN 198
Cdd:cd00284  161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
10-196 2.11e-87

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 261.93  E-value: 2.11e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913   10 FIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLH 89
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913   90 VGRGMYYG--SYIFMETWNIGVVLLFAVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATL 167
Cdd:pfam00033  81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 822674913  168 TRFFAFHFILPFIIAALAMVHLIFLHETG 196
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 250-331 7.65e-11

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 59.81  E-value: 7.65e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913  250 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILALLPFLHNSKQRSMTF-RPISQCMFwvLVADLFTLt 328
Cdd:TIGR01156  65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFrRPVATTVF--LFGTVVAL- 141


                  ...
gi 822674913  329 WIG 331
Cdd:TIGR01156 142 WLG 144
 
Name Accession Description Interval E-value
CYTB MTH00100
cytochrome b; Provisional
 1-366 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 741.46  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913   1 PLIKIINDSFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGAS 80
Cdd:MTH00100   9 PLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGAS 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913  81 MFFICLFLHVGRGMYYGSYIFMETWNIGVVLLFAVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 160
Cdd:MTH00100  89 MFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 161 SVDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPIGLDSDADKIPFHPYYTIKDTLGFLLLFLILLTLVLFSPD 240
Cdd:MTH00100 169 SVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPD 248

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 241 LLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILALLPFLHNSKQRSMTFRPISQCMFWVL 320
Cdd:MTH00100 249 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLL 328

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*.
gi 822674913 321 VADLFTLTWIGGQPVEHPFVIIGQIASILYFSIILILLPLSSALEN 366
Cdd:MTH00100 329 VADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIEN 374
CYTB MTH00119
cytochrome b; Provisional
 1-366 0e+00

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 681.63  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913   1 PLIKIINDSFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGAS 80
Cdd:MTH00119  10 PLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGAS 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913  81 MFFICLFLHVGRGMYYGSYIFMETWNIGVVLLFAVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 160
Cdd:MTH00119  90 MFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGF 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 161 SVDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPIGLDSDADKIPFHPYYTIKDTLGFLLLFLILLTLVLFSPD 240
Cdd:MTH00119 170 SVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPN 249

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 241 LLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILALLPFLHNSKQRSMTFRPISQCMFWVL 320
Cdd:MTH00119 250 LLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTL 329

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*.
gi 822674913 321 VADLFTLTWIGGQPVEHPFVIIGQIASILYFSIILILLPLSSALEN 366
Cdd:MTH00119 330 VANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALEN 375
CYTB MTH00131
cytochrome b; Provisional
 1-366 0e+00

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 670.59  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913   1 PLIKIINDSFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGAS 80
Cdd:MTH00131   9 PLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGAS 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913  81 MFFICLFLHVGRGMYYGSYIFMETWNIGVVLLFAVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 160
Cdd:MTH00131  89 FFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGF 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 161 SVDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPIGLDSDADKIPFHPYYTIKDTLGFLLLFLILLTLVLFSPD 240
Cdd:MTH00131 169 SVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPN 248

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 241 LLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILALLPFLHNSKQRSMTFRPISQCMFWVL 320
Cdd:MTH00131 249 LLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTL 328

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*.
gi 822674913 321 VADLFTLTWIGGQPVEHPFVIIGQIASILYFSIILILLPLSSALEN 366
Cdd:MTH00131 329 VADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLEN 374
CYTB MTH00074
cytochrome b; Provisional
 1-366 0e+00

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 649.43  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913   1 PLIKIINDSFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGAS 80
Cdd:MTH00074  10 PLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGAS 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913  81 MFFICLFLHVGRGMYYGSYIFMETWNIGVVLLFAVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 160
Cdd:MTH00074  90 FFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGF 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 161 SVDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPIGLDSDADKIPFHPYYTIKDTLGFLLLFLILLTLVLFSPD 240
Cdd:MTH00074 170 SVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPN 249

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 241 LLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILALLPFLHNSKQRSMTFRPISQCMFWVL 320
Cdd:MTH00074 250 LLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWLL 329

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*.
gi 822674913 321 VADLFTLTWIGGQPVEHPFVIIGQIASILYFSIILILLPLSSALEN 366
Cdd:MTH00074 330 VANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLEN 375
CYTB MTH00191
cytochrome b; Provisional
 1-360 0e+00

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 633.49  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913   1 PLIKIINDSFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGAS 80
Cdd:MTH00191   6 PLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGAS 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913  81 MFFICLFLHVGRGMYYGSYIFMETWNIGVVLLFAVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 160
Cdd:MTH00191  86 FFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGF 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 161 SVDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPIGLDSDADKIPFHPYYTIKDTLGFLLLFLILLTLVLFSPD 240
Cdd:MTH00191 166 SVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPN 245

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 241 LLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILALLPFLHNSKQRSMTFRPISQCMFWVL 320
Cdd:MTH00191 246 LLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFWLW 325

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|
gi 822674913 321 VADLFTLTWIGGQPVEHPFVIIGQIASILYFSIILILLPL 360
Cdd:MTH00191 326 VANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFPL 365
CYTB MTH00156
cytochrome b; Provisional
 3-357 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 622.96  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913   3 IKIINDSFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGASMF 82
Cdd:MTH00156   1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913  83 FICLFLHVGRGMYYGSYIFMETWNIGVVLLFAVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSV 162
Cdd:MTH00156  81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 163 DKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPIGLDSDADKIPFHPYYTIKDTLGFLLLFLILLTLVLFSPDLL 242
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 243 GDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILALLPFLHNSKQRSMTFRPISQCMFWVLVA 322
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320

                        330       340       350
                 ....*....|....*....|....*....|....*
gi 822674913 323 DLFTLTWIGGQPVEHPFVIIGQIASILYFSIILIL 357
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
CYTB MTH00145
cytochrome b; Provisional
 1-365 0e+00

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 600.35  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913   1 PLIKIINDSFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGAS 80
Cdd:MTH00145  10 PVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGAS 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913  81 MFFICLFLHVGRGMYYGSYIFMETWNIGVVLLFAVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 160
Cdd:MTH00145  90 FFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGF 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 161 SVDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPIGLDSDADKIPFHPYYTIKDTLGFLLLFLILLTLVLFSPD 240
Cdd:MTH00145 170 SVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPN 249

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 241 LLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILALLPFLHNSKQRSMTFRPISQCMFWVL 320
Cdd:MTH00145 250 LLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFWIF 329

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*
gi 822674913 321 VADLFTLTWIGGQPVEHPFVIIGQIASILYFSIILIlLPLSSALE 365
Cdd:MTH00145 330 VGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLI-LPLVQKLW 373
CYTB MTH00034
cytochrome b; Validated
 1-366 0e+00

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 593.99  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913   1 PLIKIINDSFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGAS 80
Cdd:MTH00034   9 PLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGAS 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913  81 MFFICLFLHVGRGMYYGSYIFMETWNIGVVLLFAVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 160
Cdd:MTH00034  89 LFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGF 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 161 SVDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPIGLDSDADKIPFHPYYTIKDTLGFLLLFLILLTLVLFSPD 240
Cdd:MTH00034 169 SVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPT 248

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 241 LLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILALLPFLHNSKQRSMTFRPISQCMFWVL 320
Cdd:MTH00034 249 ALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWLL 328

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*.
gi 822674913 321 VADLFTLTWIGGQPVEHPFVIIGQIASILYFSIILILLPLSSALEN 366
Cdd:MTH00034 329 IATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLEN 374
CYTB MTH00016
cytochrome b; Validated
 1-357 0e+00

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 561.22  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913   1 PLIKIINDSFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGAS 80
Cdd:MTH00016  10 PLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGAS 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913  81 MFFICLFLHVGRGMYYGSYIFMETWNIGVVLLFAVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 160
Cdd:MTH00016  90 FFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGF 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 161 SVDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPIGLDSDADKIPFHPYYTIKDTLGFLLLFLILLTLVLFSPD 240
Cdd:MTH00016 170 SVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPN 249

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 241 LLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILALLPFLHNSKQRSMTFRPISQCMFWVL 320
Cdd:MTH00016 250 ILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFWLL 329

                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 822674913 321 VADLFTLTWIGGQPVEHPFVIIGQIASILYFSIILIL 357
Cdd:MTH00016 330 VSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMIN 366
CYTB MTH00053
cytochrome b; Provisional
 1-366 0e+00

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 515.41  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913   1 PLIKIINDSFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGAS 80
Cdd:MTH00053  10 PVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGAS 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913  81 MFFICLFLHVGRGMYYGSYIFMETWNIGVVLLFAVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 160
Cdd:MTH00053  90 MFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGF 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 161 SVDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPIGLDSDADKIPFHPYYTIKDTLGFLLLFLILLTLVLFSPD 240
Cdd:MTH00053 170 SVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPY 249

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 241 LLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILALLPFLHNSKQRSMTFRPISQCMFWVL 320
Cdd:MTH00053 250 SLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFL 329

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*.
gi 822674913 321 VADLFTLTWIGGQPVEHPFVIIGQIASILYFSIILILLPLSSALEN 366
Cdd:MTH00053 330 VGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLEN 375
CYTB MTH00022
cytochrome b; Validated
 1-366 0e+00

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 513.48  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913   1 PLIKIINDSFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGAS 80
Cdd:MTH00022   8 PLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGAS 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913  81 MFFICLFLHVGRGMYYGSYIFMETWNIGVVLLFAVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 160
Cdd:MTH00022  88 LFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGF 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 161 SVDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPIGLDSDADKIPFHPYYTIKDTLGFLLLFLILLTLVLFSPD 240
Cdd:MTH00022 168 SVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPN 247

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 241 LLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILALLPFLHNSKQRSMTFRPISQCMFWVL 320
Cdd:MTH00022 248 LLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWFL 327

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*.
gi 822674913 321 VADLFTLTWIGGQPVEHPFVIIGQIASILYFSIILILLPLSSALEN 366
Cdd:MTH00022 328 IVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELEN 373
CYTB MTH00224
cytochrome b; Provisional
 1-366 6.64e-177

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 496.37  E-value: 6.64e-177
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913   1 PLIKIINDSFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGAS 80
Cdd:MTH00224  10 PAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGAS 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913  81 MFFICLFLHVGRGMYYGSYIFMETWNIGVVLLFAVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 160
Cdd:MTH00224  90 MFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGF 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 161 SVDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPIGLDSDADKIPFHPYYTIKDTLGFLLLFLILLTLVLFSPD 240
Cdd:MTH00224 170 AVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPN 249

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 241 LLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILALLPFLHNSKQRSMTFRPISQCMFWVL 320
Cdd:MTH00224 250 LFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFWLL 329

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*.
gi 822674913 321 VADLFTLTWIGGQPVEHPFVIIGQIASILYFSiILILLPLSSALEN 366
Cdd:MTH00224 330 VTSWAILTWIGGRPVEDPFEGIGQVFTILYFS-YFIISPAISKLWD 374
CYTB MTH00033
cytochrome b; Provisional
 2-366 8.02e-138

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 397.39  E-value: 8.02e-138
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913   2 LIKIINDsFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGASM 81
Cdd:MTH00033   8 LLEPVND-IIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASL 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913  82 FFICLFLHVGRGMYYGSYIFMETWNIGVVLLFAVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFS 161
Cdd:MTH00033  87 FFICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFS 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 162 VDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPIGLDSDADKIPFHPYYTIKDTLGFLLLFLILLTLVLFS--P 239
Cdd:MTH00033 167 VSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEPriE 246

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 240 DLLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILALLPFLHNSKQRSMTFRPISQCMFWV 319
Cdd:MTH00033 247 TLLQDPENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWF 326

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*...
gi 822674913 320 LVADLFTLTWIGGQPV-EHPFVIIGQIASILYFSIILILLPLSSALEN 366
Cdd:MTH00033 327 IVGDFIILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYLSN 374
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
1-365 1.47e-134

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 389.15  E-value: 1.47e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913   1 PLIKIINDsFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGAS 80
Cdd:COG1290   19 PLASLVRE-HLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGAS 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913  81 MFFICLFLHVGRGMYYGSY-----IfmeTWNIGVVLLFAVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEW 155
Cdd:COG1290   98 LFFAAVYLHMFRGFFYGAYkkpreL---NWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTW 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 156 IWGGFSVDKATLTRFFAFH-FILPFIIAALAMVHLIFLHETGSNNPIGLD----SDADKIPFHPYYTIKDTLGFLLLFLI 230
Cdd:COG1290  175 LFGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPErkktEKVDGVPFHPYYTVKDGFGFFVFLGV 254

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 231 LLTLVLFSPDllGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIP--NKLGGVIALVLSILILALLPFLHNSKQRSMT 308
Cdd:COG1290  255 FALLAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPR 332

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 822674913 309 FRPISQCMFWVLVADLFTLTWIGGQPVehPFVIIGQIASILYFSIILILLPLSSALE 365
Cdd:COG1290  333 YRPVRTALGVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
CYTB MTH00086
cytochrome b; Provisional
 4-358 2.66e-124

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 361.95  E-value: 2.66e-124
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913   4 KIINDSFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGASMFF 83
Cdd:MTH00086   1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913  84 ICLFLHVGRGMYYGSYIFMETWNIGVVLLFAVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVD 163
Cdd:MTH00086  81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 164 KATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPIGLDSDADKIPFHPYYTIKDtLGFLLLFLILLTLVLFSPDLLG 243
Cdd:MTH00086 161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKD-AYNIIFWLVFIIFSLFYPFNLG 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 244 DPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILALLPFLHNSkqrSMTFRPISQCMFWVLVAD 323
Cdd:MTH00086 240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNY---TSCLNKLNKFLVFSFIVV 316

                        330       340       350
                 ....*....|....*....|....*....|....*
gi 822674913 324 LFTLTWIGGQPVEHPFVIIGQIASILYFSIILILL 358
Cdd:MTH00086 317 NVILSWLGQCLVEYPFLFLSQIFSFIYFFLILLML 351
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 1-198 2.11e-95

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 282.72  E-value: 2.11e-95
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913   1 PLIKIINDSFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGAS 80
Cdd:cd00284    1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913  81 MFFICLFLHVGRGMYYGSYI--FMETWNIGVVLLFAVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWG 158
Cdd:cd00284   81 MFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 822674913 159 GFSVDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSN 198
Cdd:cd00284  161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
CYTB MTH00046
cytochrome b; Validated
 2-356 5.42e-93

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 281.87  E-value: 5.42e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913   2 LIKIINDSFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGASM 81
Cdd:MTH00046   1 MISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913  82 FFICLFLHVGRGMYYGSYIFMETWNIGVVLLFAVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFS 161
Cdd:MTH00046  81 LFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 162 VDKATLTRFFAFHFILPFIIAALAMVHLIFLHETGSNNPIGL-DSDADKIPFHPYYTIKDTLGFLLLFLILLTLVLFSPD 240
Cdd:MTH00046 161 VTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPD 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 241 LLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIaLVLSILILALLPflhnSKQRSMTFRPISQCMFWVL 320
Cdd:MTH00046 241 LVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLV-LVLSFLFFLWVP----TFNGSSVYSVWRQVNFWLI 315

                        330       340       350
                 ....*....|....*....|....*....|....*.
gi 822674913 321 VADLFTLTWIGGQPVEHPFVIIGQIASILYFSIILI 356
Cdd:MTH00046 316 VSLFFSLSYLGGCHPEYPYLLISQLFSVLMVLLLFI 351
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
10-196 2.11e-87

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 261.93  E-value: 2.11e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913   10 FIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLH 89
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913   90 VGRGMYYG--SYIFMETWNIGVVLLFAVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATL 167
Cdd:pfam00033  81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 822674913  168 TRFFAFHFILPFIIAALAMVHLIFLHETG 196
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytochrome_b_C cd00290
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 199-346 2.01e-51

Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.


Pssm-ID: 238179 [Multi-domain]  Cd Length: 147  Bit Score: 168.21  E-value: 2.01e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 199 NPIGLDSDADKIPFHPYYTIKDTLGFLLLFLILLTLVLFSPDLLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPN 278
Cdd:cd00290    1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 822674913 279 KLGGVIALVLSILILALLPFLHNSKQRSmTFRPISQCMFWVLVADLFTLTWIGGQPVEHPFVIIGQIA 346
Cdd:cd00290   81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
250-350 1.17e-50

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 164.57  E-value: 1.17e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913  250 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILALLPFLHNSKQRSMTFRPISQCMFWVLVADLFTLTW 329
Cdd:pfam00032   1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80

                          90       100
                  ....*....|....*....|.
gi 822674913  330 IGGQPVEHPFVIIGQIASILY 350
Cdd:pfam00032  81 LGKQPPTGPYTLLGQIATVYY 101
PRK03735 PRK03735
cytochrome b6; Provisional
 25-201 2.26e-42

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 147.17  E-value: 2.26e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913  25 FGSLLGVCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGMYYGSYIFME- 103
Cdd:PRK03735  44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 104 -TWNIGVVLLFAVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFH-FILPFII 181
Cdd:PRK03735 124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203

                        170       180
                 ....*....|....*....|
gi 822674913 182 AALAMVHLIFLHETGSNNPI 201
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGPL 223
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
80-245 1.10e-41

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 143.54  E-value: 1.10e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913   80 SMFFICLFLHVGRGMYYGSYIFME--TWNIGVVLLFAVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIW 157
Cdd:pfam13631   1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913  158 GGFSVDKATLTRFFAFHF-ILPFIIAALAMVHLIFLHETGSNNPIGLDSDADKIPFHPYYTIKDTLGFLLLFLILLTLVL 236
Cdd:pfam13631  81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160


                  ....*....
gi 822674913  237 FSPDLLGDP 245
Cdd:pfam13631 161 INPIWLGGP 169
petB CHL00070
cytochrome b6
 3-201 2.06e-34

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 125.99  E-value: 2.06e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913   3 IKIINDSFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGASMF 82
Cdd:CHL00070  14 IQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMM 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913  83 FICLFLHVGRGMYYGSYIFME--TWNIGVVLLFAVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 160
Cdd:CHL00070  94 VLMMILHVFRVYLTGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSV 173

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 822674913 161 SVDKATLTRFFAFH-FILPFIIAALAMVHLIFLHETGSNNPI 201
Cdd:CHL00070 174 SVGQSTLTRFYSLHtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
PetD COG5679
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ...
 250-331 6.54e-13

Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];


Pssm-ID: 444393 [Multi-domain]  Cd Length: 161  Bit Score: 65.97  E-value: 6.54e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 250 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILALLPFLHNSKQRSMTF-RPISQCMFwvLVADLFTLt 328
Cdd:COG5679   66 PADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENVNKFQNPFrRPVATAVF--LFGTLVTL- 142


                 ...
gi 822674913 329 WIG 331
Cdd:COG5679  143 WLG 145
petD CHL00058
cytochrome b6/f complex subunit IV
 250-331 6.41e-12

cytochrome b6/f complex subunit IV


Pssm-ID: 176998  Cd Length: 160  Bit Score: 63.10  E-value: 6.41e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913 250 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILALLPFLHN-SKQRSMTFRPISQCMFwvLVADLFTLt 328
Cdd:CHL00058  65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLENvNKFQNPFRRPVATTVF--LIGTAVAL- 141


                 ...
gi 822674913 329 WIG 331
Cdd:CHL00058 142 WLG 144
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 250-331 7.65e-11

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 59.81  E-value: 7.65e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 822674913  250 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVIALVLSILILALLPFLHNSKQRSMTF-RPISQCMFwvLVADLFTLt 328
Cdd:TIGR01156  65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFrRPVATTVF--LFGTVVAL- 141


                  ...
gi 822674913  329 WIG 331
Cdd:TIGR01156 142 WLG 144
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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