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Conserved domains on  [gi|823332680|gb|AKI30775|]
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chloroplast glycerol-3-phosphate acyltransferase, partial [Metrosideros vitiensis]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN02349 super family cl33472
glycerol-3-phosphate acyltransferase
 1-16 7.80e-06

glycerol-3-phosphate acyltransferase


The actual alignment was detected with superfamily member PLN02349:

Pssm-ID: 215199 [Multi-domain]  Cd Length: 426  Bit Score: 38.20  E-value: 7.80e-06
                         10
                 ....*....|....*.
gi 823332680   1 LLLRGGSQLLWIAPSG 16
Cdd:PLN02349 288 LLLREGGQLIWIAPSG 303
 
Name Accession Description Interval E-value
PLN02349 PLN02349
glycerol-3-phosphate acyltransferase
 1-16 7.80e-06

glycerol-3-phosphate acyltransferase


Pssm-ID: 215199 [Multi-domain]  Cd Length: 426  Bit Score: 38.20  E-value: 7.80e-06
                         10
                 ....*....|....*.
gi 823332680   1 LLLRGGSQLLWIAPSG 16
Cdd:PLN02349 288 LLLREGGQLIWIAPSG 303
LPLAT_GPAT cd07985
Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT; ...
 1-16 2.55e-04

Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT; Lysophospholipid acyltransferase (LPLAT) superfamily member: glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB). LPLATs are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. This subgroup includes glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB).


Pssm-ID: 153247  Cd Length: 235  Bit Score: 33.95  E-value: 2.55e-04
                         10
                 ....*....|....*.
gi 823332680   1 LLLRGGSQLLWIAPSG 16
Cdd:cd07985  109 QLLNEGGQLIWVAPSG 124
 
Name Accession Description Interval E-value
PLN02349 PLN02349
glycerol-3-phosphate acyltransferase
 1-16 7.80e-06

glycerol-3-phosphate acyltransferase


Pssm-ID: 215199 [Multi-domain]  Cd Length: 426  Bit Score: 38.20  E-value: 7.80e-06
                         10
                 ....*....|....*.
gi 823332680   1 LLLRGGSQLLWIAPSG 16
Cdd:PLN02349 288 LLLREGGQLIWIAPSG 303
LPLAT_GPAT cd07985
Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT; ...
 1-16 2.55e-04

Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT; Lysophospholipid acyltransferase (LPLAT) superfamily member: glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB). LPLATs are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. This subgroup includes glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB).


Pssm-ID: 153247  Cd Length: 235  Bit Score: 33.95  E-value: 2.55e-04
                         10
                 ....*....|....*.
gi 823332680   1 LLLRGGSQLLWIAPSG 16
Cdd:cd07985  109 QLLNEGGQLIWVAPSG 124
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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