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Conserved domains on  [gi|916338332|gb|AKZ16754|]
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cytochrome b, partial (mitochondrion) [Maculolachnus submacula]

Protein Classification

cytochrome b( domain architecture ID 999997)

cytochrome b is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain; contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis

CATH:  1.20.810.10
Gene Symbol:  CYTB
Gene Ontology:  GO:0009055|GO:0046872|GO:0022904|GO:0005743|GO:0020037
PubMed:  2509716|8329437
SCOP:  4002208

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CYTB super family cl33360
cytochrome b; Provisional
 1-234 1.45e-134

cytochrome b; Provisional


The actual alignment was detected with superfamily member MTH00156:

Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 382.21  E-value: 1.45e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332   1 FLAFHYKTDINLAFQSIINMNRNINFGWLIRSLHANGASMFFIMMYLHISRGIYMNSFNFKMTWIIGTILLLLTMMTAFV 80
Cdd:MTH00156  40 FLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFL 119

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332  81 GYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILLFVMIHLMFLHLTGSNNPL 160
Cdd:MTH00156 120 GYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPL 199

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 916338332 161 GINSNFDKMPFAPYFIIKDIMGMIMFLWMMMTLTLMFPYMLNDHNNFIMANPMITPNHIQPEWYFLFSYSILRA 234
Cdd:MTH00156 200 GLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGDPENFIPANPLVTPVHIQPEWYFLFAYAILRS 273
 
Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 1-234 1.45e-134

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 382.21  E-value: 1.45e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332   1 FLAFHYKTDINLAFQSIINMNRNINFGWLIRSLHANGASMFFIMMYLHISRGIYMNSFNFKMTWIIGTILLLLTMMTAFV 80
Cdd:MTH00156  40 FLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFL 119

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332  81 GYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILLFVMIHLMFLHLTGSNNPL 160
Cdd:MTH00156 120 GYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPL 199

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 916338332 161 GINSNFDKMPFAPYFIIKDIMGMIMFLWMMMTLTLMFPYMLNDHNNFIMANPMITPNHIQPEWYFLFSYSILRA 234
Cdd:MTH00156 200 GLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGDPENFIPANPLVTPVHIQPEWYFLFAYAILRS 273
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
1-234 3.16e-85

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 258.18  E-value: 3.16e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332   1 FLAFHYKTDINLAFQSIINMNRNINFGWLIRSLHANGASMFFIMMYLHISRGIYMNSFNF--KMTWIIGTILLLLTMMTA 78
Cdd:COG1290   59 FLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAYKKprELNWIIGVLLLLLTMAEA 138

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332  79 FVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIH-FILPFIILLFVMIHLMFLHLTGSN 157
Cdd:COG1290  139 FTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHN 218

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332 158 NPLGI----NSNFDKMPFAPYFIIKDIMGMIMFLWMMMTLTLMFPymLNDHNNFIMANPMITPNHIQPEWYFLFSYSILR 233
Cdd:COG1290  219 NPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFP--INPPPNYGPANPLATPAHIQPDWYFLPFYGILR 296


                 .
gi 916338332 234 A 234
Cdd:COG1290  297 A 297
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 1-157 1.65e-62

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 193.74  E-value: 1.65e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332   1 FLAFHYKTDINLAFQSIINMNRNINFGWLIRSLHANGASMFFIMMYLHISRGIYMNSFN--FKMTWIIGTILLLLTMMTA 78
Cdd:cd00284   42 FLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLLLTMATA 121

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 916338332  79 FVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILLFVMIHLMFLHLTGSN 157
Cdd:cd00284  122 FMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
1-155 2.88e-58

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 182.58  E-value: 2.88e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332    1 FLAFHYKTDINLAFQSIINMNRNINFGWLIRSLHANGASMFFIMMYLHISRGIYMNSFN--FKMTWIIGTILLLLTMMTA 78
Cdd:pfam00033  33 FLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYYGGFSypRELTWVIGVILLVLTMSTA 112

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 916338332   79 FVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILLFVMIHLMFLHLTG 155
Cdd:pfam00033 113 FIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRFFSLHFLLPFILAILMLLHLLFLHETG 189
 
Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 1-234 1.45e-134

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 382.21  E-value: 1.45e-134
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332   1 FLAFHYKTDINLAFQSIINMNRNINFGWLIRSLHANGASMFFIMMYLHISRGIYMNSFNFKMTWIIGTILLLLTMMTAFV 80
Cdd:MTH00156  40 FLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFL 119

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332  81 GYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILLFVMIHLMFLHLTGSNNPL 160
Cdd:MTH00156 120 GYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPL 199

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 916338332 161 GINSNFDKMPFAPYFIIKDIMGMIMFLWMMMTLTLMFPYMLNDHNNFIMANPMITPNHIQPEWYFLFSYSILRA 234
Cdd:MTH00156 200 GLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGDPENFIPANPLVTPVHIQPEWYFLFAYAILRS 273
CYTB MTH00119
cytochrome b; Provisional
 1-234 1.93e-127

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 365.38  E-value: 1.93e-127
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332   1 FLAFHYKTDINLAFQSIINMNRNINFGWLIRSLHANGASMFFIMMYLHISRGIYMNSFNFKMTWIIGTILLLLTMMTAFV 80
Cdd:MTH00119  51 FLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFV 130

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332  81 GYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILLFVMIHLMFLHLTGSNNPL 160
Cdd:MTH00119 131 GYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPL 210

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 916338332 161 GINSNFDKMPFAPYFIIKDIMGMIMFLWMMMTLTLMFPYMLNDHNNFIMANPMITPNHIQPEWYFLFSYSILRA 234
Cdd:MTH00119 211 GLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRS 284
CYTB MTH00131
cytochrome b; Provisional
 1-234 9.21e-122

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 350.88  E-value: 9.21e-122
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332   1 FLAFHYKTDINLAFQSIINMNRNINFGWLIRSLHANGASMFFIMMYLHISRGIYMNSFNFKMTWIIGTILLLLTMMTAFV 80
Cdd:MTH00131  50 FLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFV 129

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332  81 GYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILLFVMIHLMFLHLTGSNNPL 160
Cdd:MTH00131 130 GYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPL 209

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 916338332 161 GINSNFDKMPFAPYFIIKDIMGMIMFLWMMMTLTLMFPYMLNDHNNFIMANPMITPNHIQPEWYFLFSYSILRA 234
Cdd:MTH00131 210 GLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRS 283
CYTB MTH00145
cytochrome b; Provisional
 1-233 2.04e-119

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 344.97  E-value: 2.04e-119
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332   1 FLAFHYKTDINLAFQSIINMNRNINFGWLIRSLHANGASMFFIMMYLHISRGIYMNSFNFKMTWIIGTILLLLTMMTAFV 80
Cdd:MTH00145  51 FLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFL 130

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332  81 GYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILLFVMIHLMFLHLTGSNNPL 160
Cdd:MTH00145 131 GYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPL 210

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 916338332 161 GINSNFDKMPFAPYFIIKDIMGMIMFLWMMMTLTLMFPYMLNDHNNFIMANPMITPNHIQPEWYFLFSYSILR 233
Cdd:MTH00145 211 GLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILR 283
CYTB MTH00100
cytochrome b; Provisional
 1-234 2.97e-119

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 344.31  E-value: 2.97e-119
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332   1 FLAFHYKTDINLAFQSIINMNRNINFGWLIRSLHANGASMFFIMMYLHISRGIYMNSFNFKMTWIIGTILLLLTMMTAFV 80
Cdd:MTH00100  50 FLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFM 129

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332  81 GYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILLFVMIHLMFLHLTGSNNPL 160
Cdd:MTH00100 130 GYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPS 209

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 916338332 161 GINSNFDKMPFAPYFIIKDIMGMIMFLWMMMTLTLMFPYMLNDHNNFIMANPMITPNHIQPEWYFLFSYSILRA 234
Cdd:MTH00100 210 GIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRS 283
CYTB MTH00191
cytochrome b; Provisional
 1-234 2.04e-118

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 341.89  E-value: 2.04e-118
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332   1 FLAFHYKTDINLAFQSIINMNRNINFGWLIRSLHANGASMFFIMMYLHISRGIYMNSFNFKMTWIIGTILLLLTMMTAFV 80
Cdd:MTH00191  47 FLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFL 126

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332  81 GYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILLFVMIHLMFLHLTGSNNPL 160
Cdd:MTH00191 127 GYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPL 206

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 916338332 161 GINSNFDKMPFAPYFIIKDIMGMIMFLWMMMTLTLMFPYMLNDHNNFIMANPMITPNHIQPEWYFLFSYSILRA 234
Cdd:MTH00191 207 GLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRS 280
CYTB MTH00074
cytochrome b; Provisional
 1-234 2.27e-114

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 332.03  E-value: 2.27e-114
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332   1 FLAFHYKTDINLAFQSIINMNRNINFGWLIRSLHANGASMFFIMMYLHISRGIYMNSFNFKMTWIIGTILLLLTMMTAFV 80
Cdd:MTH00074  51 FLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFV 130

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332  81 GYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILLFVMIHLMFLHLTGSNNPL 160
Cdd:MTH00074 131 GYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPT 210

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 916338332 161 GINSNFDKMPFAPYFIIKDIMGMIMFLWMMMTLTLMFPYMLNDHNNFIMANPMITPNHIQPEWYFLFSYSILRA 234
Cdd:MTH00074 211 GLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRS 284
CYTB MTH00034
cytochrome b; Validated
 1-234 4.34e-113

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 328.97  E-value: 4.34e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332   1 FLAFHYKTDINLAFQSIINMNRNINFGWLIRSLHANGASMFFIMMYLHISRGIYMNSFNFKMTWIIGTILLLLTMMTAFV 80
Cdd:MTH00034  50 FLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFV 129

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332  81 GYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILLFVMIHLMFLHLTGSNNPL 160
Cdd:MTH00034 130 GYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPT 209

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 916338332 161 GINSNFDKMPFAPYFIIKDIMGMIMFLWMMMTLTLMFPYMLNDHNNFIMANPMITPNHIQPEWYFLFSYSILRA 234
Cdd:MTH00034 210 GLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRS 283
CYTB MTH00016
cytochrome b; Validated
 1-234 4.77e-112

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 326.25  E-value: 4.77e-112
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332   1 FLAFHYKTDINLAFQSIINMNRNINFGWLIRSLHANGASMFFIMMYLHISRGIYMNSFNFKMTWIIGTILLLLTMMTAFV 80
Cdd:MTH00016  51 FLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFL 130

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332  81 GYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILLFVMIHLMFLHLTGSNNPL 160
Cdd:MTH00016 131 GYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPL 210

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 916338332 161 GINSNFDKMPFAPYFIIKDIMGMIMFLWMMMTLTLMFPYMLNDHNNFIMANPMITPNHIQPEWYFLFSYSILRA 234
Cdd:MTH00016 211 GVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRS 284
CYTB MTH00053
cytochrome b; Provisional
 1-234 7.56e-97

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 287.37  E-value: 7.56e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332   1 FLAFHYKTDINLAFQSIINMNRNINFGWLIRSLHANGASMFFIMMYLHISRGIYMNSFNFKMTWIIGTILLLLTMMTAFV 80
Cdd:MTH00053  51 FLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFI 130

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332  81 GYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILLFVMIHLMFLHLTGSNNPL 160
Cdd:MTH00053 131 GYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPI 210

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 916338332 161 GINSNFDKMPFAPYFIIKDIMGMIMFLWMMMTLTLMFPYMLNDHNNFIMANPMITPNHIQPEWYFLFSYSILRA 234
Cdd:MTH00053 211 GVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRS 284
CYTB MTH00022
cytochrome b; Validated
 1-234 4.07e-96

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 285.44  E-value: 4.07e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332   1 FLAFHYKTDINLAFQSIINMNRNINFGWLIRSLHANGASMFFIMMYLHISRGIYMNSFNFKMTWIIGTILLLLTMMTAFV 80
Cdd:MTH00022  49 FLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFM 128

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332  81 GYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILLFVMIHLMFLHLTGSNNPL 160
Cdd:MTH00022 129 GYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPI 208

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 916338332 161 GINSNFDKMPFAPYFIIKDIMGMIMFLWMMMTLTLMFPYMLNDHNNFIMANPMITPNHIQPEWYFLFSYSILRA 234
Cdd:MTH00022 209 GLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRS 282
CYTB MTH00224
cytochrome b; Provisional
 1-234 6.93e-96

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 284.89  E-value: 6.93e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332   1 FLAFHYKTDINLAFQSIINMNRNINFGWLIRSLHANGASMFFIMMYLHISRGIYMNSFNFKMTWIIGTILLLLTMMTAFV 80
Cdd:MTH00224  51 FLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFL 130

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332  81 GYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILLFVMIHLMFLHLTGSNNPL 160
Cdd:MTH00224 131 GYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPI 210

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 916338332 161 GINSNFDKMPFAPYFIIKDIMGMIMFLWMMMTLTLMFPYMLNDHNNFIMANPMITPNHIQPEWYFLFSYSILRA 234
Cdd:MTH00224 211 GINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRS 284
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
1-234 3.16e-85

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 258.18  E-value: 3.16e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332   1 FLAFHYKTDINLAFQSIINMNRNINFGWLIRSLHANGASMFFIMMYLHISRGIYMNSFNF--KMTWIIGTILLLLTMMTA 78
Cdd:COG1290   59 FLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAYKKprELNWIIGVLLLLLTMAEA 138

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332  79 FVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIH-FILPFIILLFVMIHLMFLHLTGSN 157
Cdd:COG1290  139 FTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHN 218

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332 158 NPLGI----NSNFDKMPFAPYFIIKDIMGMIMFLWMMMTLTLMFPymLNDHNNFIMANPMITPNHIQPEWYFLFSYSILR 233
Cdd:COG1290  219 NPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFP--INPPPNYGPANPLATPAHIQPDWYFLPFYGILR 296


                 .
gi 916338332 234 A 234
Cdd:COG1290  297 A 297
CYTB MTH00086
cytochrome b; Provisional
 1-234 7.50e-81

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 246.00  E-value: 7.50e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332   1 FLAFHYKTDINLAFQSIINMNRNINFGWLIRSLHANGASMFFIMMYLHISRGIYMNSFNFKMTWIIGTILLLLTMMTAFV 80
Cdd:MTH00086  39 FLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFM 118

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332  81 GYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILLFVMIHLMFLHLTGSNNPL 160
Cdd:MTH00086 119 GYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSL 198

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 916338332 161 GINSNFDKMPFAPYFIIKDIMGMIMFLwMMMTLTLMFPYMLNDHNNFIMANPMITPNHIQPEWYFLFSYSILRA 234
Cdd:MTH00086 199 YCHGDYDKICFGPEYWNKDAYNIIFWL-VFIIFSLFYPFNLGDPEMFIEADPMMSPVHIVPEWYFLFAYAILRA 271
CYTB MTH00033
cytochrome b; Provisional
 1-234 5.87e-79

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 242.15  E-value: 5.87e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332   1 FLAFHYKTDINLAFQSIINMNRNINFGWLIRSLHANGASMFFIMMYLHISRGIYMNSFNFKMTWIIGTILLLLTMMTAFV 80
Cdd:MTH00033  47 LLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFI 126

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332  81 GYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILLFVMIHLMFLHLTGSNNPL 160
Cdd:MTH00033 127 GYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPL 206

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 916338332 161 GINSNFDKMPFAPYFIIKDIMGMIMFLWMMMTLTL--MFPYMLNDHNNFIMANPMITPNHIQPEWYFLFSYSILRA 234
Cdd:MTH00033 207 GLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIepRIETLLQDPENFIQANPLVTPVHIQPEWYFLFAYAILRS 282
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 1-157 1.65e-62

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 193.74  E-value: 1.65e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332   1 FLAFHYKTDINLAFQSIINMNRNINFGWLIRSLHANGASMFFIMMYLHISRGIYMNSFN--FKMTWIIGTILLLLTMMTA 78
Cdd:cd00284   42 FLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLLLTMATA 121

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 916338332  79 FVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILLFVMIHLMFLHLTGSN 157
Cdd:cd00284  122 FMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
CYTB MTH00046
cytochrome b; Validated
 1-233 1.25e-59

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 191.35  E-value: 1.25e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332   1 FLAFHYKTDINLAFQSIINMNRNINFGWLIRSLHANGASMFFIMMYLHISRGIYMNSFNFKMTWIIGTILLLLTMMTAFV 80
Cdd:MTH00046  41 LLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFL 120

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332  81 GYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILLFVMIHLMFLHLTGSNNPL 160
Cdd:MTH00046 121 GYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPL 200

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 916338332 161 GINSNF-DKMPFAPYFIIKDIMGMIMFLWMMMTLTLMFPYMLNDHNNFIMANPMITPNHIQPEWYFLFSYSILR 233
Cdd:MTH00046 201 FSSNGYsDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLR 274
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
1-155 2.88e-58

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 182.58  E-value: 2.88e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332    1 FLAFHYKTDINLAFQSIINMNRNINFGWLIRSLHANGASMFFIMMYLHISRGIYMNSFN--FKMTWIIGTILLLLTMMTA 78
Cdd:pfam00033  33 FLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYYGGFSypRELTWVIGVILLVLTMSTA 112

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 916338332   79 FVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIHFILPFIILLFVMIHLMFLHLTG 155
Cdd:pfam00033 113 FIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRFFSLHFLLPFILAILMLLHLLFLHETG 189
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
39-201 2.42e-39

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 133.52  E-value: 2.42e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332   39 SMFFIMMYLHISRGIYMNSFNF--KMTWIIGTILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIW 116
Cdd:pfam13631   1 YIFIAAIYVHMLRIFFTGAYRKprELNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332  117 GGFSINNATLTRFFSIHF-ILPFIILLFVMIHLMFLHLTGSNNPLGINSNFDKMPFAPYFIIKDIMGMIMFLWMMMTLTL 195
Cdd:pfam13631  81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160


                  ....*.
gi 916338332  196 MFPYML 201
Cdd:pfam13631 161 INPIWL 166
PRK03735 PRK03735
cytochrome b6; Provisional
 1-160 8.27e-35

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 123.67  E-value: 8.27e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332   1 FLAFHYKTDINLAFQSIINMNRNINFGWLIRSLHANGASMFFIMMYLHISRGIYMNSFN--FKMTWIIGTILLLLTMMTA 78
Cdd:PRK03735  61 FLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKkpRELNWVVGVLIFFVTVGLG 140

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332  79 FVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIH-FILPFIILLFVMIHLMFLHLTGSN 157
Cdd:PRK03735 141 FTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWALAVLMLAHFLMIRKQGIS 220


                 ...
gi 916338332 158 NPL 160
Cdd:PRK03735 221 GPL 223
petB CHL00070
cytochrome b6
 2-160 2.89e-33

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 119.44  E-value: 2.89e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332   2 LAFHYKTDINLAFQSIINMNRNINFGWLIRSLHANGASMFFIMMYLHISRgIYMNSfNFK----MTWIIGTILLLLTMMT 77
Cdd:CHL00070  54 MTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFR-VYLTG-GFKkpreLTWVTGVVLAVLTVSF 131

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 916338332  78 AFVGYVLPWGQMSFWGATVITNLLSAIPYLGNSIVIWIWGGFSINNATLTRFFSIH-FILPFIILLFVMIHLMFLHLTGS 156
Cdd:CHL00070 132 GVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSLHtFVLPLLTAVFMLMHFLMIRKQGI 211


                 ....
gi 916338332 157 NNPL 160
Cdd:CHL00070 212 SGPL 215
cytochrome_b_C cd00290
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 158-234 1.32e-17

Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.


Pssm-ID: 238179 [Multi-domain]  Cd Length: 147  Bit Score: 76.53  E-value: 1.32e-17
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 916338332 158 NPLGINSNFDKMPFAPYFIIKDIMGMIMFLWMMMTLTLMFPYMLNDHNNFIMANPMITPNHIQPEWYFLFSYSILRA 234
Cdd:cd00290    1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRA 77
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
209-234 1.32e-08

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 50.94  E-value: 1.32e-08
                          10        20
                  ....*....|....*....|....*.
gi 916338332  209 MANPMITPNHIQPEWYFLFSYSILRA 234
Cdd:pfam00032   1 PANPLVTPAHIVPEWYFLPFYAILRS 26
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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