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Conserved domains on  [gi|919491480|gb|ALA20846|]
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NADH dehydrogenase subunit 3, partial (mitochondrion) [Zosterops minutus]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009581)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 3-92 2.09e-51

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 157.00  E-value: 2.09e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491480   3 QMNPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQNPTTTLIWTSTLILLLTLGLMYE 82
Cdd:MTH00136  27 QMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLLTFFWATAVLILLTLGLIYE 106

                         90
                 ....*....|
gi 919491480  83 WAQGGLEWAE 92
Cdd:MTH00136 107 WLQGGLEWAE 116
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 3-92 2.09e-51

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 157.00  E-value: 2.09e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491480   3 QMNPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQNPTTTLIWTSTLILLLTLGLMYE 82
Cdd:MTH00136  27 QMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLLTFFWATAVLILLTLGLIYE 106

                         90
                 ....*....|
gi 919491480  83 WAQGGLEWAE 92
Cdd:MTH00136 107 WLQGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
1-89 5.23e-27

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 94.41  E-value: 5.23e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491480   1 IAQMNPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQL-QNPTTTLIWTSTLILLLTLGL 79
Cdd:pfam00507  7 LGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFrELGWFGFVEMLIFIAILLVGL 84

                         90
                 ....*....|
gi 919491480  80 MYEWAQGGLE 89
Cdd:pfam00507 85 VYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 5-90 9.38e-22

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 81.71  E-value: 9.38e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491480   5 NPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQL-QNPTTTLIWTSTLILLLTLGLMYEW 83
Cdd:COG0838   33 RPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFrELGWFGLIEMLVFIAILLVGLIYAW 110


                 ....*..
gi 919491480  84 AQGGLEW 90
Cdd:COG0838  111 KKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 3-92 2.09e-51

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 157.00  E-value: 2.09e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491480   3 QMNPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQNPTTTLIWTSTLILLLTLGLMYE 82
Cdd:MTH00136  27 QMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLLTFFWATAVLILLTLGLIYE 106

                         90
                 ....*....|
gi 919491480  83 WAQGGLEWAE 92
Cdd:MTH00136 107 WLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 3-92 5.00e-49

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 150.91  E-value: 5.00e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491480   3 QMNPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQNPTTTLIWTSTLILLLTLGLMYE 82
Cdd:MTH00069  25 LNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLNTPTNTLFWSTLILILLTLGLIYE 104

                         90
                 ....*....|
gi 919491480  83 WAQGGLEWAE 92
Cdd:MTH00069 105 WIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-91 1.67e-47

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 146.95  E-value: 1.67e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491480   1 IAQMNPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQNPTTTLIWTSTLILLLTLGLM 80
Cdd:MTH00113  24 LTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINLTTPTTTLTWATIILTLLTLGLI 103

                         90
                 ....*....|.
gi 919491480  81 YEWAQGGLEWA 91
Cdd:MTH00113 104 YEWLQGGLEWA 114
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 3-92 1.31e-41

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 131.99  E-value: 1.31e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491480   3 QMNPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQNPTTTLIWTSTLILLLTLGLMYE 82
Cdd:MTH00106  26 QLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALLLISLLALSLAYE 105

                         90
                 ....*....|
gi 919491480  83 WAQGGLEWAE 92
Cdd:MTH00106 106 WTQKGLEWTE 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 5-92 2.00e-37

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 121.63  E-value: 2.00e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491480   5 NPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQNPTTTLIWTSTLILLLTLGLMYEWA 84
Cdd:MTH00042  29 SPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATLITNPSTLLPISLIFLIILTIGLVYEWV 108


                 ....*...
gi 919491480  85 QGGLEWAE 92
Cdd:MTH00042 109 NGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 3-90 1.09e-33

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 111.91  E-value: 1.09e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491480   3 QMNPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQNPttTLIWTSTLILLLTLGLMYE 82
Cdd:MTH00203  27 KVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSSL--SLLLAFLFLILLTLGLIYE 104


                 ....*...
gi 919491480  83 WAQGGLEW 90
Cdd:MTH00203 105 WLQGGLEW 112
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 7-90 4.18e-28

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 97.54  E-value: 4.18e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491480   7 DAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQNPTTTLIWTSTLILLLTLGLMYEWAQG 86
Cdd:MTH00161  30 DREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSSFFILILLLGLYYEWNQG 109


                 ....
gi 919491480  87 GLEW 90
Cdd:MTH00161 110 ALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
1-89 5.23e-27

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 94.41  E-value: 5.23e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491480   1 IAQMNPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQL-QNPTTTLIWTSTLILLLTLGL 79
Cdd:pfam00507  7 LGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFrELGWFGFVEMLIFIAILLVGL 84

                         90
                 ....*....|
gi 919491480  80 MYEWAQGGLE 89
Cdd:pfam00507 85 VYAWKKGALE 94
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 7-92 1.52e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 91.46  E-value: 1.52e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491480   7 DAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQNPTTTLIWTSTLILLLTLGLMYEWAQG 86
Cdd:MTH00148  32 DREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGSSFSVWSLTSLFIFLLILILGLFHEWNEG 111


                 ....*.
gi 919491480  87 GLEWAE 92
Cdd:MTH00148 112 SLDWVS 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 2-92 3.75e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 87.74  E-value: 3.75e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491480   2 AQMNPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQNPTTTLIWTSTLILLLTLGLMY 81
Cdd:MTH00202  27 FRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWSKGGLLGGTIFLLILIGGLIH 106

                         90
                 ....*....|.
gi 919491480  82 EWAQGGLEWAE 92
Cdd:MTH00202 107 EWKEGSLDWVK 117
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 6-90 4.13e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 85.15  E-value: 4.13e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491480   6 PDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLQNPTTTLIWTSTLILLLTLG-LMYEWA 84
Cdd:MTH00055  34 PDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCVVYNQIGLFGFWVMYLFLIILTIgLIYEWV 111


                 ....*.
gi 919491480  85 QGGLEW 90
Cdd:MTH00055 112 KGGLEW 117
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 5-90 9.38e-22

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 81.71  E-value: 9.38e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491480   5 NPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQL-QNPTTTLIWTSTLILLLTLGLMYEW 83
Cdd:COG0838   33 RPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFrELGWFGLIEMLVFIAILLVGLIYAW 110


                 ....*..
gi 919491480  84 AQGGLEW 90
Cdd:COG0838  111 KKGALEW 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 2-91 3.06e-21

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 80.67  E-value: 3.06e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491480   2 AQMNPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQNPTTTLIWTSTLILLLTLGLMY 81
Cdd:MTH00012  27 ARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTSTSKTVVYTSILFLLILVIGLIH 106

                         90
                 ....*....|
gi 919491480  82 EWAQGGLEWA 91
Cdd:MTH00012 107 EWREGSLDWS 116
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 5-91 1.58e-20

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 78.75  E-value: 1.58e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491480   5 NPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLQNPTTTLIWTSTLILLLTLG-LMYEW 83
Cdd:PRK06602  36 APDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFREIGWLGFVEAMIFILVLLVgLVYLW 113


                 ....*...
gi 919491480  84 AQGGLEWA 91
Cdd:PRK06602 114 RKGALDWE 121
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 6-90 1.27e-19

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 76.25  E-value: 1.27e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491480   6 PDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQNPTTTLIwTSTLILLLTLGLMYEWAQ 85
Cdd:MTH00018  29 PDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQIAPFGFWT-MVGFLFILTLGLIYEWIK 107


                 ....*
gi 919491480  86 GGLEW 90
Cdd:MTH00018 108 GGLEW 112
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 1-90 1.08e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 71.50  E-value: 1.08e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491480   1 IAQMNPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLQNPTTTLIWTSTLILLLTLGLM 80
Cdd:MTH00030  34 IGLTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFNQLNLFSFWIVYTFLIVLAIGL 111

                         90
                 ....*....|.
gi 919491480  81 -YEWAQGGLEW 90
Cdd:MTH00030 112 aYEWIKGGLEW 122
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 10-90 9.52e-11

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 53.52  E-value: 9.52e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491480  10 KLSPYECGFDPLGSARLP--FSIRFFLVAILFLLFDLEIALLLPlpWATQLQN-PTTTLIWTSTLILLLTLGLMYEWAQG 86
Cdd:PRK07928  37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDAlGVFGLVEMALFMLTVFVAYAYVWRRG 114


                 ....
gi 919491480  87 GLEW 90
Cdd:PRK07928 115 GLEW 118
ndhC CHL00022
NADH dehydrogenase subunit 3
 1-90 3.51e-09

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 49.60  E-value: 3.51e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491480   1 IAQMNPDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLQN-PTTTLIWTSTLILLLTLGL 79
Cdd:CHL00022  31 LAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVlGVSAFIEALIFVLILIVGL 108

                         90
                 ....*....|.
gi 919491480  80 MYEWAQGGLEW 90
Cdd:CHL00022 109 VYAWRKGALEW 119
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 10-50 2.54e-08

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 47.20  E-value: 2.54e-08
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 919491480  10 KLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLL 50
Cdd:MTH00092  34 KVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
6-90 2.43e-07

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 45.12  E-value: 2.43e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491480   6 PDAEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPlpWATQLQN-PTTTLIWTSTLILLLTLGLMYEWA 84
Cdd:PRK07756  38 PSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAYDKlGLFALIEMLIFVVMLLVGLAYAWK 115


                 ....*.
gi 919491480  85 QGGLEW 90
Cdd:PRK07756 116 KKVLQW 121
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
1-90 1.01e-06

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 43.50  E-value: 1.01e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919491480   1 IAQMNPDAEKLSPYECGFDPLGSARlPFSIRFFLVAILFLLFDLEIALLlpLPWATQLQNPTT-TLIWTSTLILLLTLGL 79
Cdd:PRK08489  38 LAQKNTEKLKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWAVDFKLLGLfGLIEMLLFIVLLTIGF 114

                         90
                 ....*....|.
gi 919491480  80 MYEWAQGGLEW 90
Cdd:PRK08489 115 IYAWKKGALEW 125
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 12-53 2.39e-06

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 42.19  E-value: 2.39e-06
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 919491480  12 SPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLP 53
Cdd:MTH00060  39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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