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polyprotein, partial [Hepacivirus hominis]
List of domain hits
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Name | Accession | Description | Interval | E-value | |||
HCV_NS1 super family | cl03263 | Hepatitis C virus non-structural protein E2/NS1; The hypervariable region of the E2/NS1 region ... |
41-139 | 2.16e-52 | |||
Hepatitis C virus non-structural protein E2/NS1; The hypervariable region of the E2/NS1 region of hepatitis C virus varies greatly between viral isolates. E2 is thought to encode a structurally unconstrained envelope protein. The actual alignment was detected with superfamily member pfam01560: Pssm-ID: 110557 Cd Length: 344 Bit Score: 168.88 E-value: 2.16e-52
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HCV_env super family | cl03255 | Hepatitis C virus envelope glycoprotein E1; |
1-37 | 1.44e-17 | |||
Hepatitis C virus envelope glycoprotein E1; The actual alignment was detected with superfamily member pfam01539: Pssm-ID: 110536 Cd Length: 190 Bit Score: 74.92 E-value: 1.44e-17
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Name | Accession | Description | Interval | E-value | |||
HCV_NS1 | pfam01560 | Hepatitis C virus non-structural protein E2/NS1; The hypervariable region of the E2/NS1 region ... |
41-139 | 2.16e-52 | |||
Hepatitis C virus non-structural protein E2/NS1; The hypervariable region of the E2/NS1 region of hepatitis C virus varies greatly between viral isolates. E2 is thought to encode a structurally unconstrained envelope protein. Pssm-ID: 110557 Cd Length: 344 Bit Score: 168.88 E-value: 2.16e-52
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HCV_env | pfam01539 | Hepatitis C virus envelope glycoprotein E1; |
1-37 | 1.44e-17 | |||
Hepatitis C virus envelope glycoprotein E1; Pssm-ID: 110536 Cd Length: 190 Bit Score: 74.92 E-value: 1.44e-17
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Name | Accession | Description | Interval | E-value | |||
HCV_NS1 | pfam01560 | Hepatitis C virus non-structural protein E2/NS1; The hypervariable region of the E2/NS1 region ... |
41-139 | 2.16e-52 | |||
Hepatitis C virus non-structural protein E2/NS1; The hypervariable region of the E2/NS1 region of hepatitis C virus varies greatly between viral isolates. E2 is thought to encode a structurally unconstrained envelope protein. Pssm-ID: 110557 Cd Length: 344 Bit Score: 168.88 E-value: 2.16e-52
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HCV_env | pfam01539 | Hepatitis C virus envelope glycoprotein E1; |
1-37 | 1.44e-17 | |||
Hepatitis C virus envelope glycoprotein E1; Pssm-ID: 110536 Cd Length: 190 Bit Score: 74.92 E-value: 1.44e-17
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Blast search parameters | ||||
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