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Conserved domains on  [gi|1015567573|gb|AMV91956|]
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cytochrome b, partial (mitochondrion) [Ovis aries]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CYTB super family cl31797
cytochrome b; Provisional
 1-49 5.94e-27

cytochrome b; Provisional


The actual alignment was detected with superfamily member MTH00100:

Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 98.94  E-value: 5.94e-27
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 1015567573   1 NKLGGVLALILSILVLVIMPLLHTSKQRSMMFRPISQCMFWILVADLLT 49
Cdd:MTH00100  286 NKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLT 334
 
Name Accession Description Interval E-value
CYTB MTH00100
cytochrome b; Provisional
 1-49 5.94e-27

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 98.94  E-value: 5.94e-27
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 1015567573   1 NKLGGVLALILSILVLVIMPLLHTSKQRSMMFRPISQCMFWILVADLLT 49
Cdd:MTH00100  286 NKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLT 334
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
1-48 2.28e-15

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 63.27  E-value: 2.28e-15
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 1015567573   1 NKLGGVLALILSILVLVIMPLLHTSKQRSMMFRPISQCMFWILVADLL 48
Cdd:pfam00032  29 SKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFV 76
 
Name Accession Description Interval E-value
CYTB MTH00100
cytochrome b; Provisional
 1-49 5.94e-27

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 98.94  E-value: 5.94e-27
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 1015567573   1 NKLGGVLALILSILVLVIMPLLHTSKQRSMMFRPISQCMFWILVADLLT 49
Cdd:MTH00100  286 NKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLT 334
CYTB MTH00119
cytochrome b; Provisional
 1-49 1.91e-22

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 86.49  E-value: 1.91e-22
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 1015567573   1 NKLGGVLALILSILVLVIMPLLHTSKQRSMMFRPISQCMFWILVADLLT 49
Cdd:MTH00119  287 NKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLLI 335
CYTB MTH00131
cytochrome b; Provisional
 1-48 6.41e-21

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 82.39  E-value: 6.41e-21
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 1015567573   1 NKLGGVLALILSILVLVIMPLLHTSKQRSMMFRPISQCMFWILVADLL 48
Cdd:MTH00131  286 NKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLVADVL 333
CYTB MTH00074
cytochrome b; Provisional
 1-48 1.18e-20

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 81.65  E-value: 1.18e-20
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 1015567573   1 NKLGGVLALILSILVLVIMPLLHTSKQRSMMFRPISQCMFWILVADLL 48
Cdd:MTH00074  287 NKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWLLVANTL 334
CYTB MTH00191
cytochrome b; Provisional
 1-48 8.32e-17

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 71.10  E-value: 8.32e-17
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 1015567573   1 NKLGGVLALILSILVLVIMPLLHTSKQRSMMFRPISQCMFWILVADLL 48
Cdd:MTH00191  283 NKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFWLWVANFI 330
CYTB MTH00034
cytochrome b; Validated
 1-48 6.26e-16

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 68.58  E-value: 6.26e-16
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 1015567573   1 NKLGGVLALILSILVLVIMPLLHTSKQRSMMFRPISQCMFWILVADLL 48
Cdd:MTH00034  286 NKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWLLIATFF 333
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
1-48 2.28e-15

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 63.27  E-value: 2.28e-15
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 1015567573   1 NKLGGVLALILSILVLVIMPLLHTSKQRSMMFRPISQCMFWILVADLL 48
Cdd:pfam00032  29 SKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFV 76
CYTB MTH00145
cytochrome b; Provisional
 1-45 4.85e-14

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 63.39  E-value: 4.85e-14
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 1015567573   1 NKLGGVLALILSILVLVIMPLLHTSKQRSMMFRPISQCMFWILVA 45
Cdd:MTH00145  287 NKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFWIFVG 331
CYTB MTH00053
cytochrome b; Provisional
 1-48 2.04e-13

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 61.65  E-value: 2.04e-13
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 1015567573   1 NKLGGVLALILSILVLVIMPLLHTSKQRSMMFRPISQCMFWILVADLL 48
Cdd:MTH00053  287 NKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFLVGDFF 334
CYTB MTH00022
cytochrome b; Validated
 1-48 3.35e-13

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 60.87  E-value: 3.35e-13
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 1015567573   1 NKLGGVLALILSILVLVIMPLLHTSKQRSMMFRPISQCMFWILVADLL 48
Cdd:MTH00022  285 NKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWFLIVDFI 332
CYTB MTH00156
cytochrome b; Provisional
 1-44 3.57e-13

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 60.95  E-value: 3.57e-13
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 1015567573   1 NKLGGVLALILSILVLVIMPLLHTSKQRSMMFRPISQCMFWILV 44
Cdd:MTH00156  276 NKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFV 319
CYTB MTH00016
cytochrome b; Validated
 1-48 4.55e-12

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 57.76  E-value: 4.55e-12
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 1015567573   1 NKLGGVLALILSILVLVIMPLLHTSKQRSMMFRPISQCMFWILVADLL 48
Cdd:MTH00016  287 NKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFWLLVSNFL 334
CYTB MTH00224
cytochrome b; Provisional
 1-45 1.25e-09

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 51.08  E-value: 1.25e-09
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 1015567573   1 NKLGGVLALILSILVLVIMPLLHTSKQRSMMFRPISQCMFWILVA 45
Cdd:MTH00224  287 NKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFWLLVT 331
CYTB MTH00033
cytochrome b; Provisional
 1-48 3.16e-09

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 49.94  E-value: 3.16e-09
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 1015567573   1 NKLGGVLALILSILVLVIMPLLHTSKQRSMMFRPISQCMFWILVADLL 48
Cdd:MTH00033  285 NKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFI 332
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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