|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-328 |
2.24e-145 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 413.45 E-value: 2.24e-145
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 1 AAGTVITMSSSHWLLAWVGLELNTLAIVPVISKHHHPRSTEATTKYFLTQAAASALVLFASTTNAWSTGTWDITQLTDQQ 80
Cdd:MTH00112 14 ILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWNTGQWDITQLTNPT 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 81 ACALLTTALAMKLGLAPLHFWLPEVLQGASLKTALIIATWQKLAPLSLLYMAHNSIIPALLLTMAVFSVITGGWGGLNQT 160
Cdd:MTH00112 94 SCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAILSTLIGGWGGLNQT 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 161 QTRKIMAFSSIAHLGWMTSILAMNPNITLLNLALYIIMTTSMFLTLMFTSSKTIKDLTTSWTVSPSTTALMLLLLMSMGG 240
Cdd:MTH00112 174 QLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTLNTTLMLTLLSLAG 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 241 LPPMTGFMPKWLILQELMTHSLTTTTTVMALSTLLSLFFYLRLSYISTLTISPTTSKDPHKWRFQPKlSTSLMNMATAMS 320
Cdd:MTH00112 254 LPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK-KNTLTATLTTLS 332
|
....*...
gi 1036243727 321 VLLLPLTP 328
Cdd:MTH00112 333 TLLLPLSP 340
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
3-328 |
1.66e-142 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 406.50 E-value: 1.66e-142
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 3 GTVITMSSSHWLLAWVGLELNTLAIVPVISKHHHPRSTEATTKYFLTQAAASALVLFASTTNAWSTGTWDITQLTDQQAC 82
Cdd:MTH00135 16 GTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWLTGQWDIQQMSHPLPT 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 83 ALLTTALAMKLGLAPLHFWLPEVLQGASLKTALIIATWQKLAPLSLLYMAHNSIiPALLLTMAVFSVITGGWGGLNQTQT 162
Cdd:MTH00135 96 TMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPTN-PTLLITLGLTSTLVGGWGGLNQTQL 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 163 RKIMAFSSIAHLGWMTSILAMNPNITLLNLALYIIMTTSMFLTLMFTSSKTIKDLTTSWTVSPSTTALMLLLLMSMGGLP 242
Cdd:MTH00135 175 RKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPALTALTPLILLSLGGLP 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 243 PMTGFMPKWLILQELMTHSLTTTTTVMALSTLLSLFFYLRLSYISTLTISPTTSKDPHKWRFQPKLSTSLMNMATAMSVL 322
Cdd:MTH00135 255 PLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPSTQLTLPLAISTTATLM 334
|
....*.
gi 1036243727 323 LLPLTP 328
Cdd:MTH00135 335 LLPLTP 340
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-328 |
2.07e-135 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 388.51 E-value: 2.07e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 1 AAGTVITMSSSHWLLAWVGLELNTLAIVPVISKHHHPRSTEATTKYFLTQAAASALVLFASTTNAWSTGTWDITQLTDQQ 80
Cdd:MTH00070 14 ALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWFTGEWTIMNMQTPL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 81 ACALLTTALAMKLGLAPLHFWLPEVLQGASLKTALIIATWQKLAPLSLLYMAHNSIIPALLLTMAVFSVITGGWGGLNQT 160
Cdd:MTH00070 94 PTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLLSTLIGGWGGLNQT 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 161 QTRKIMAFSSIAHLGWMTSILAMNPNITLLNLALYIIMTTSMFLTLMFTSSKTIKDLTTSWTVSPSTTALMLLLLMSMGG 240
Cdd:MTH00070 174 QLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTLTSMMMLTLLSLGG 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 241 LPPMTGFMPKWLILQELMTHSLTTTTTVMALSTLLSLFFYLRLSYISTLTISPTTSKDPHKWRFQPKlSTSLMNMATAMS 320
Cdd:MTH00070 254 LPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK-TNNLLSLTIILS 332
|
....*...
gi 1036243727 321 VLLLPLTP 328
Cdd:MTH00070 333 LMLLPITP 340
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
3-331 |
6.50e-128 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 369.17 E-value: 6.50e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 3 GTVITMSSSHWLLAWVGLELNTLAIVPVISKHHHPRSTEATTKYFLTQAAASALVLFASTTNAWSTGTWDITQLTDQQAC 82
Cdd:MTH00105 16 GTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMYSGQWTITKLTNPTAS 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 83 ALLTTALAMKLGLAPLHFWLPEVLQGASLKTALIIATWQKLAPLSLLYMAHNSIIPALLLTMAVFSVITGGWGGLNQTQT 162
Cdd:MTH00105 96 TLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAILSILIGGWGGLNQTQL 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 163 RKIMAFSSIAHLGWMTSILAMNPNITLLNLALYIIMTTSMFLTLMFTSSKTIKDLTTSWTVSPSTTALMLLLLMSMGGLP 242
Cdd:MTH00105 176 RKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLMTSLILLTLLSLGGLP 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 243 PMTGFMPKWLILQELMTHSLTTTTTVMALSTLLSLFFYLRLSYISTLTISPTTSKDPHKWRFQPKLSTSLMNMATAMSVL 322
Cdd:MTH00105 256 PLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENTKPMTLLPTLIILSTM 335
|
....*....
gi 1036243727 323 LLPLTPYFS 331
Cdd:MTH00105 336 LLPLTPMLS 344
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
3-332 |
2.17e-99 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 296.88 E-value: 2.17e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 3 GTVITMSSSHWLLAWVGLELNTLAIVPVISKHHHPRSTEATTKYFLTQAAASALVLFASTTNAWSTGTWDITQLTDQQAC 82
Cdd:MTH00200 16 GTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWGISEMLGPLSE 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 83 ALLTTALAMKLGLAPLHFWLPEVLQGASLKTALIIATWQKLAPLSLLYMAHNSIIPALLLTMAVFSVITGGWGGLNQTQT 162
Cdd:MTH00200 96 TLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLLSVLVGGWGGLNQTQL 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 163 RKIMAFSSIAHLGWMTSILAMNPNITLLNLALYIIMTTSMFLTLMFTSSKTIKDLTTSWTVSPSTTALMLLLLMSMGGLP 242
Cdd:MTH00200 176 RKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLP 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 243 PMTGFMPKWLILQELMTHSLTTTTTVMALSTLLSLFFYLRLSYISTLTISPTTSKDPHKWRFQPkLSTSLMNMATAMSVL 322
Cdd:MTH00200 256 PLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKS-NSNLLVGLLLLLSIL 334
|
330
....*....|
gi 1036243727 323 LLPLTPYFSC 332
Cdd:MTH00200 335 GLPLTPQLLF 344
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
2-324 |
2.69e-92 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 278.74 E-value: 2.69e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 2 AGTVITMSSSHWLLAWVGLELNTLAIVPVISKHHHPRSTEATTKYFLTQAAASALVLFASTTNAWSTGTWDITQLTDQQA 81
Cdd:MTH00041 15 LGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPLNTLS 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 82 CALLTTALAMKLGLAPLHFWLPEVLQGASLKTALIIATWQKLAPLSLLYMAHNSIIPALLLTMAVFSVITGGWGGLNQTQ 161
Cdd:MTH00041 95 SIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGLNQTQ 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 162 TRKIMAFSSIAHLGWMTSILAMNPNITLLNLALYIIMTTSMFLTLMFTSSKTIKDLTTSWTVSPSTTALMLLLLMSMGGL 241
Cdd:MTH00041 175 TRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILSLGGL 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 242 PPMTGFMPKWLILQELMTHSLTTTTTVMALSTLLSLFFYLRLSYISTLTISPTTSKDPHKWRfQPKLSTSLMNMATAMSV 321
Cdd:MTH00041 255 PPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWR-NSGNITVYGVILSILSS 333
|
...
gi 1036243727 322 LLL 324
Cdd:MTH00041 334 ISI 336
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
3-330 |
4.94e-60 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 195.43 E-value: 4.94e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 3 GTVITMSSSHWLLAWVGLELNTLAIVPVISKHHHPRSTEATTKYFLTQAAASALVLFASTTNAWSTGTWDITQLTdqqac 82
Cdd:MTH00160 17 GTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLNLMLFNNISSM----- 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 83 aLLTTALAMKLGLAPLHFWLPEVLQGASLKTALIIATWQKLAPLSLLYMahnSIIPALLLTMAVFSVITGGWGGLNQTQT 162
Cdd:MTH00160 92 -LINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSY---LINNNFIIIIIILSAIIGAIGGLNQTSL 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 163 RKIMAFSSIAHLGWMTSILAMNPNITLLNLALYIIMTTSMFLTLMFTSSKTIKDLTTSWTVSPSTTALMLLLLMSMGGLP 242
Cdd:MTH00160 168 RKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLNLLSLGGLP 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 243 PMTGFMPKWLILQELMTHSLTTTTTVMALSTLLSLFFYLRLSYiSTLTISPTTSKdpHKWRFQPKLSTSLMNMATAMSVL 322
Cdd:MTH00160 248 PFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISY-SSLMLNYNKNK--WNLKKKKNKFSLILNFLSFISLF 324
|
....*...
gi 1036243727 323 LLPLTPYF 330
Cdd:MTH00160 325 GLILSSLL 332
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
3-326 |
1.40e-56 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 186.25 E-value: 1.40e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 3 GTVITMSSSHWLLAWVGLELNTLAIVPVISKHHHPRSTEATTKYFLTQAAASALVLFASTTNAWSTGTWDITqltdqqac 82
Cdd:MTH00144 16 GTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM-------- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 83 ALLTTALAMKLGLAPLHFWLPEVLQGASLKTALIIATWQKLAPLSLLYMAHNSIIPA-LLLTMAVFSVITGGWGGLNQTQ 161
Cdd:MTH00144 88 SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAyLLCVISVLSALVGSIGGLNQTQ 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 162 TRKIMAFSSIAHLGWMTSILAMNPNITLLNLALYIIMTTSMFLTLMFTSSKTIKDLTTSwTVSPSTTALMLLLLMSMGGL 241
Cdd:MTH00144 168 VRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSL-KPSYKTGLSIISLLLSLGGL 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 242 PPMTGFMPKWLILQELMTHSLTTTTTVMALSTLLSLFFYLRLSYISTLtisptTSKDPHKWRFQPKLSTSLMNMATAMSV 321
Cdd:MTH00144 247 PPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL-----SSSKSKKSNSSKVLNSSIISLNLLGGL 321
|
....*
gi 1036243727 322 LLLPL 326
Cdd:MTH00144 322 LFLLL 326
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
3-296 |
2.51e-49 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 167.65 E-value: 2.51e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 3 GTVITMSSSHWLLAWVGLELNTLAIVPVISKHHHPRSTEATTKYFLTQAAASALVLFASTTnawstgTWDITQLTDQQAC 82
Cdd:MTH00011 18 GTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM------MWSFPSLLKNITA 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 83 ALLTTALAMKLGLAPLHFWLPEVLQGASLKTALIIATWQKLAPLSLLYMAHNSIIPALLLTMAVFSVITGGWGGLNQTQT 162
Cdd:MTH00011 92 LMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGMNQTQL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 163 RKIMAFSSIAHLGWMTSILAMNPNITLLNLALYIIMTTSMFLTLMFTSSKTIKDLTTSWTVSPSTTALMLLLLMSMGGLP 242
Cdd:MTH00011 172 RPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSLGGLP 251
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1036243727 243 PMTGFMPKWLILQELMTHSLTTTTTVMALSTLLSLFFYLRLsYISTLTISPTTS 296
Cdd:MTH00011 252 PFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNL-IFNFMYLSPTFS 304
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
3-285 |
6.45e-42 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 147.90 E-value: 6.45e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 3 GTVITMSSSHWLLAWVGLELNTLAIVPVISKHHHPRSTEATTKYFLTQAAASALVLF---ASTTNAWstgtwditqlTDQ 79
Cdd:MTH00197 10 GVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMggsLSFSNLY----------LSL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 80 QACALLTTALAMKLGLAPLHFWLPEVLQGASLKTALIIATWQKLAPLSLLymAHNSIIPALLLTMAVFSVITGGWGGLNQ 159
Cdd:MTH00197 80 LSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLIL--AFNSSSFMGLLICSVLSSLIGGIGGMNQ 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 160 TQTRKIMAFSSIAHLGWMTSILAMNPNITLLNLALYIIMTTSMFLTLMFTSSKTIKDLTTSWTVSPSTTALMLLLLMSMG 239
Cdd:MTH00197 158 SNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSLG 237
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1036243727 240 GLPPMTGFMPKWLILQELMTHSLTTTTTVMALSTLLSLFFYLRLSY 285
Cdd:MTH00197 238 GLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAY 283
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
1-283 |
8.29e-28 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 112.52 E-value: 8.29e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 1 AAGTVITMSSSHWLLAWVGLELNTLAI-VPVISKHHHPRSTEATTKYFLTQAAASALVLFASTTNAWSTGTWDITQLTDQ 79
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLyVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIAAA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 80 Q------------ACALLTTALAMKLGLAPLHFWLPEVLQGASLKTALIIATWQKLAPLS----LLYMAHNSIIPALLLT 143
Cdd:COG1007 192 LaagganspllllGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAallrLLVEAFPGLAADWQLL 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 144 MAVFSVIT---GGWGGLNQTQTRKIMAFSSIAHLGWM-TSILAMNPNI---TLLNLALYIIMTTSMFLTLMFTSSK---- 212
Cdd:COG1007 272 LAVLAVLSmtvGNLAALAQTNVKRMLAYSSIAHAGYLlLGLAAGTPLGvsaALFYLLAYLFMNLGAFAVILLLSRKggea 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1036243727 213 -TIKDLTTSWTVSPSTTALMLLLLMSMGGLPPMTGFMPKWLILQELMTHSLTTTTTVMALSTLLSLFFYLRL 283
Cdd:COG1007 352 eEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRV 423
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
10-258 |
3.44e-26 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 105.47 E-value: 3.44e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 10 SSHWLLAWVGLELNTLAIVPVI-SKHHHPRSTEATTKYFLTQAAASALVLFASTTNAWSTGTWDITQLTDQQACA----- 83
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGlnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 84 ------LLTTALAMKLGLAPLHFWLPEVLQGASLK-TALIIATWQKLAPL-----SLLYMAHNSIIPALLLTMAVFSVIT 151
Cdd:pfam00361 81 llllflLILVGFLFKSAQVPFHTWLPDAYEGAPTPvSALLAATLVKAGGYglirrSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 152 GGWGGLNQTQTRKIMAFSSIAHLGWMTSILAMNPNIT----LLNLALYIIMTTSMFL-----TLMFTSSKTIKDLTTSWT 222
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGiqaaIFHLLTHGLFSAGLFLcagsvIYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|....*.
gi 1036243727 223 VSPSTTALMLLLLMSMGGLPPMTGFMPKWLILQELM 258
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAV 276
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
1-286 |
4.70e-26 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 106.27 E-value: 4.70e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 1 AAGTVITMSSSHWLLAWVGLELNTLAI-VPVISKHHHPRSTEATTKYFLTQAAASALVLFASTTNAWSTGTWDI--TQLT 77
Cdd:MTH00196 3 ALGILCLISSSNWLSVYLAIELQTLSLfILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLsyINLV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 78 DQQACA-----------LLTTALAMKLGLAPLHFWLPEVLQGASLKTALIIATWQKLAPLSLLYMAHNSIIpaLLLTMAV 146
Cdd:MTH00196 83 LNSGQSfssvsvpigylLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVN--ILLIGGL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 147 FSVITGGWGGLNQTQTRKIMAFSSIAHLGWMTSILAMNP----NITLLNLALYIIMTTSMFLTLMftSSKTIKDLTTSWT 222
Cdd:MTH00196 161 FSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFSIIL--ALNVYKNLIIEFS 238
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1036243727 223 ----VSPSTTALMLLLLMSMGGLPPMTGFMPKWLILQELMTHSLTTTTTVMALSTLLSLFFYLRLSYI 286
Cdd:MTH00196 239 glsrRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRIVKI 306
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
1-286 |
3.23e-25 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 105.10 E-value: 3.23e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 1 AAGTVITMSSSHWLLAWVGLELNTLAI-VPVISKHHHPRSTEATTKYFLTQAAASALVLFASTTNAWSTGTWDI----TQ 75
Cdd:MTH00199 107 ALGSLLLVSSINWLSIYLAIELQTLTLfILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginSI 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 76 LTDQQACALLTTALAMKLGLAPLHFWLPEVLQGASLKTALIIATWQKLAPLSLLYMAhnSIIPALLLTMAVFSVITGGWG 155
Cdd:MTH00199 187 LTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQI--GPVTNVVLICAVLSIIYGAIG 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 156 GLNQTQTRKIMAFSSIAHLGWMTSILAMNPN----ITLLNLALYIIMTTSMF---LTLMFTSSkTIKDLTTSWTVSPSTT 228
Cdd:MTH00199 265 ALNQTKIKRLLAYSGIGHMGFILFGVAIGSFesiqASLIYMIIYVIMSICSFsiiLSLKLTKG-LIVEVSGLSRKNPVIA 343
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1036243727 229 ALMLLLLMSMGGLPPMTGFMPKWLILQELMTHSLTTTTTVMALSTLLSLFFYLRLSYI 286
Cdd:MTH00199 344 LTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRVVQI 401
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
1-283 |
4.32e-25 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 104.90 E-value: 4.32e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 1 AAGTVITMSSSHWLLAWVGLELNTLAIVPVISKH-HHPRSTEATTKYFLTQAAASALVLFASTTNAWSTGTWDITQLTDQ 79
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAALRrDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 80 QA------------CALLTTALAMKLGLAPLHFWLPEVLQGASLKTALIIATWQKLAP----LSLLYMAHNSIIPA---L 140
Cdd:PRK05777 193 LAdgsgnsllllfgLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAfavlLRLLVVAFGGLSEDwqqV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 141 LLTMAVFSVITGGWGGLNQTQTRKIMAFSSIAHLGWM-TSILAMNPN---ITLLNLALYIIMTTSMFLTLMFTSSK---- 212
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLlVGLAAGTAEgysAVLFYLLAYLFMTLGAFGVISLLRRKggea 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1036243727 213 -TIKDLT-TSWTvSPSTTALMLLLLMSMGGLPPMTGFMPKWLILQELMTHSLTTTTTVMALSTLLSLFFYLRL 283
Cdd:PRK05777 353 eSISDFAgLSKR-SPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
17-286 |
3.56e-23 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 99.07 E-value: 3.56e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 17 WVGLELNTLAIVPVISKHHHPRSTEATTKYFLTQAAASALVLFASTTNAWSTGTWDITQLTDQQ----------ACALLT 86
Cdd:COG0651 133 FVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLaeldpglllaAFALLL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 87 TALAMKLGLAPLHFWLPE-----------VLQGASLKTAL--IIATWQKLAPLSLLYMAHNsiipaLLLTMAVFSVITGG 153
Cdd:COG0651 213 VGFGIKAALFPLHFWLPDaypaapspvsaLLSGLLTKVGVyaILRVLTLLFGADPALFLGT-----LLLVLGLLTMLVGA 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 154 WGGLNQTQTRKIMAFSSIAHLGWMTSILAMNpNITLLNLALYIIMTTSMFLTLMF---------TSSKTIKDLTTSWTVS 224
Cdd:COG0651 288 LGALAQRDLKRLLAYSSVSQIGYILLGLGLG-TPLGLAGALFHLLNHALAKALLFlaagaieraTGTRDLDKLGGLGKRM 366
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1036243727 225 PSTTALMLLLLMSMGGLPPMTGFMPKWLILQELMTHSLTTTTTVMALSTLLSLFFYLRLSYI 286
Cdd:COG0651 367 PLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRIFGR 428
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
9-330 |
3.30e-22 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 96.56 E-value: 3.30e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 9 SSSHWLLAWVGLELNTLAI-VPVISKHHHPRSTEATTKYFLTQAAASALVLFASTTNAWSTGTWDITQLTDQQ------- 80
Cdd:TIGR01770 120 SSNDLLSIYLGLELQSLCFyVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLsngmlni 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 81 -----ACALLTTALAMKLGLAPLHFWLPEVLQGASLKTALIIATWQKLAPLSLL-------YMAHNSIIPALLLTMAVFS 148
Cdd:TIGR01770 200 sllllGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFlrlflyiLFGFSEAWQIFLAIIAFLS 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 149 VITGGWGGLNQTQTRKIMAFSSIAHLGW-MTSILAMNPN---ITLLNLALYIIMTTSMFLTLMFTSS------KTIKDLT 218
Cdd:TIGR01770 280 MLIGNFGALAQKKVKRLLAYSSISHVGYiLIGLLAGTLEgikAVLFYIFIYALMSLGAFGVLSLLRSykdewiEYISDFA 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 219 TSWTVSPSTTALMLLLLMSMGGLPPMTGFMPKWLILQELMTHSLTTTTTVMALSTLLSLFFYLRLSYISTLTispttskD 298
Cdd:TIGR01770 360 GLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVVKVMYFD-------K 432
|
330 340 350
....*....|....*....|....*....|....
gi 1036243727 299 PHKWRFQPK--LSTSLMNMATAMSVLLLPLTPYF 330
Cdd:TIGR01770 433 PERRIPSNPqsKAQSLLLSISALFILFLGLFPSL 466
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
3-177 |
1.69e-14 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 74.12 E-value: 1.69e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 3 GTVITMSSSHWLLAWVGLELNTLAIVPVISKHHHPRST---------EATTKYFLTQAAASALVLFAS------TTNAWS 67
Cdd:MTH00198 200 GGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCalyfgfTGNEGM 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 68 TGT-----WDITQLTDQQACA---LLTTALAMKLGLAPLHFWLPEVLQGASLKTALIIATWQKLAPLSLLymAHNSIIPA 139
Cdd:MTH00198 280 LGTilsatLETTNIELRQGSLgylFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILL--TSLVITSK 357
|
170 180 190
....*....|....*....|....*....|....*...
gi 1036243727 140 LLLTMAVFSVITGGWGGLNQTQTRKIMAFSSIAHLGWM 177
Cdd:MTH00198 358 LLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFI 395
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
18-285 |
4.80e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 63.36 E-value: 4.80e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 18 VGLELNTLAIVPVISKHHHPRSTEATTKYFLTQAAASALVLFASTTNAWSTGTWDITQLTD--------QQACALLTTAL 89
Cdd:PRK08375 133 VFLEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGalaenptvVTAFGFVLLAL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 90 AMKLGLAPLHFWLPEVLQGAS-LKTALIIATWQKLAPLSLL----------YMAHNSIIPaLLLTMAVFSVITGGWGGLN 158
Cdd:PRK08375 213 ALKAAVFPLHTWLPRAYPAAPpVVTALLSGLVTKVAVYALIriyftvfggdFRFALGLGW-LLAVLALLSMLVGSLAALG 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 159 QTQTRKIMAFSSIAHLGWMTSILAMNPNITLLNLALYI----IMTTSMFLTL----MFTSSKTIKDLTTSWTVSPSTTAL 230
Cdd:PRK08375 292 QDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLlhhaLMKGALFLAAgaieVTYGTRRLSELSGLGRRMPLTAAA 371
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1036243727 231 MLLLLMSMGGLPPMTGFMPKWLILQELMTHSLTTTTTVMALSTLLSLFFYLRLSY 285
Cdd:PRK08375 372 FAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
38-299 |
1.18e-09 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 59.25 E-value: 1.18e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 38 RSTEATTKYFLTQAAASALVLFA----------------------STTNAWSTGTWditqltdqQACALLTTALAMKLGL 95
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYGfswlyglsggeielqeivngliNTQMYNSPGIS--------IALIFITVGIGFKLSL 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 96 APLHFWLPEVLQGASLKTALIIATWQKLAPLSLLYMAHNSIIPA-------LLLTMAVFSVITGGWGGLNQTQTRKIMAF 168
Cdd:CHL00049 231 APFHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRIFDIPFYFssnewhlLLEILAILSMILGNLIAITQTSMKRMLAY 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 169 SSIAHLGW-MTSILAMNPNI----TLLNLALYIIMTTSMFLTLMFTSSKT----IKDLTTSWTVSPSTTALMLLLLMSMG 239
Cdd:CHL00049 311 SSIGQIGYvIIGIIVGDSNDgyasMITYMLFYIFMNLGTFACIVLFGLRTgtdnIRDYAGLYTKDPFLALSLALCLLSLG 390
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1036243727 240 GLPPMTGFMPKWLILQELMTHSLTTTTTVMALSTLLSLFFYLRL-------------SYISTLTISPTTSKDP 299
Cdd:CHL00049 391 GIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKIikllmtgrnqeitPYVRNYRRSPLRSNNS 463
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
17-253 |
2.20e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 58.57 E-value: 2.20e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 17 WVGLELNTLAIVPVISKHHH-PRSTEATTKYFLTQAAASALVLFASTTNAWSTGTWDI----------TQLTDQQACALL 85
Cdd:PRK08376 147 FVFLEIMSIASYALVAFRNDtWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMaylavkmsenPTVVAKIALALF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 86 TTALAMKLGLAPLHFWLPEVLQGA--SLKTALIIATWQKLAPL-----SLLYMAHNSI-IPALLLTMAVFSVITGGWGGL 157
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYPAApsSISAMLLVIKQAGLYALarvlfSIYGPAINLAtVGWVIIILGCLTMFVGVAMAV 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 158 NQTQTRKIMAFSSIAHLGWM-----TSILAMNPNI------TLLNLALYIIMTTSMFLTLMFTSSKTIKDLTTSWTVS-- 224
Cdd:PRK08376 307 VQKDVKRLLAYHSVSQIGYMllglgVGLAALGDPAmasygeIALAGGIYHIVNHALYKALLFLTAGAVIYETGTRNLNel 386
|
250 260 270
....*....|....*....|....*....|....*.
gi 1036243727 225 -------PSTTALMLLLLMSMGGLPPMTGFMPKWLI 253
Cdd:PRK08376 387 gglartmPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
36-185 |
5.83e-09 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 57.01 E-value: 5.83e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 36 HPRSTEATTKYFLTQAAASALVLFASTTNAWSTG--TWDITQLTDQQ--------ACALLTTALAMKLGLAPLHFWLPEV 105
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGalTFDIAELAAAPlpltaqllLFLAFFIAFAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 106 LQGASLKTALIIA---------------------TWQKLAPLsllymahnsiipalLLTMAVFSVITGGWGGLNQTQTRK 164
Cdd:COG1008 236 HVEAPTAGSVLLAgvllkmggygllrfalplfpeASAYFAPL--------------LAALGVIGIIYGALVALAQTDLKR 301
|
170 180
....*....|....*....|..
gi 1036243727 165 IMAFSSIAHLGWMT-SILAMNP 185
Cdd:COG1008 302 LIAYSSVSHMGFVLlGIFALNP 323
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
42-185 |
2.39e-08 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 54.95 E-value: 2.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 42 ATTKYFLTQAAASALVLFASTTNAWSTG-TWDITQLTDQQACALLTT--------ALAMKLGLAPLHFWLPEVLQGASLK 112
Cdd:TIGR01972 157 AAMKFFLYTLAGSLLMLLAILGLYFLGGgTFDLLELLNLPLPFGVQTwlflaffiAFAVKVPLFPLHTWLPDAHVEAPTA 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 113 TALIIA-TWQKLAP-------LSLLYMAHNSIIPaLLLTMAVFSVITGGWGGLNQTQTRKIMAFSSIAHLGWMT-SILAM 183
Cdd:TIGR01972 237 GSVILAgVLLKMGTygflrfnLPLFPDASLYFAP-VLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLlGIFSF 315
|
..
gi 1036243727 184 NP 185
Cdd:TIGR01972 316 NE 317
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
81-330 |
1.38e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 52.67 E-value: 1.38e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 81 ACALLTTALAMKLGLAPLHFWLPEV-----------LQGASLKT---ALIIATWQKLAPLSLLYMAHNSIIPALLLTMAV 146
Cdd:PRK12667 225 ALALALWAFTIKAAIFPNHFWLPDAhpaapspvsamLSGLVVNVgayAIIRFLYTIFGISPSLIDFRAALSPILIILGAV 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 147 fSVITGGWGGLNQTQTRKIMAFSSIAHLGWMTSILAMNPNITLLNLALYII----------MTTSMFLTlmFTSSKTIKD 216
Cdd:PRK12667 305 -SAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIInhaiaksllfLASGVFIH--AAGTRDIDE 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 217 LTTSWTVSPSTTALMLLLLMSMGGLPPMTGFMPKWLILQELMTHSLTTTTTVMALSTLLSLFFYLRLSYIstLTISPTTS 296
Cdd:PRK12667 382 LAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYS--LFFGKPKS 459
|
250 260 270
....*....|....*....|....*....|....*.
gi 1036243727 297 KDPHKWRFQPKLSTSLMNMATAMSV--LLLPLTPYF 330
Cdd:PRK12667 460 GEEVEHKESPSMSVVILVLALAVLIlgILALFLPEI 495
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
25-175 |
7.96e-07 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 50.42 E-value: 7.96e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 25 LAIVPV---ISKHHHPRSTEATTKYFLTQAAASALVLFASTTNAWSTG--TWDITQLTDQQ--------ACALLTTALAM 91
Cdd:PRK12561 118 LELVPVyllISIWGGQKRLYAATKFILYTALASIFILVAGLALALSGDtfTFDLAELGAKSyplalellLYAGFLIAFGV 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 92 KLGLAPLHFWLPEVLQGASLKTALIIA-TWQKLAPLSLLYM-------AHNSIIPALLlTMAVFSVITGGWGGLNQTQTR 163
Cdd:PRK12561 198 KLPIFPLHTWLPDAHGEASAPVSMILAgVLLKMGGYALIRFnvqmlpdAHVYFAPALA-ILGVVNIIYGALNAFAQDNVK 276
|
170
....*....|..
gi 1036243727 164 KIMAFSSIAHLG 175
Cdd:PRK12561 277 RRLAYSSVSHMG 288
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
15-277 |
1.34e-06 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 49.54 E-value: 1.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 15 LAWVGLELNTLAIVPVISKHHHPRSTEATTKYF---------------LTQAAASALVLFASTTNAWsTGTWDITQLTDQ 79
Cdd:PRK06458 132 LMWVAIEATTLSSALLVGIYRTRASLEAAWKYIiicsvgvafalfgtiLVYANAATVMGDGEMAILW-TELLKHASLLDP 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 80 Q----ACALLTTALAMKLGLAPLHFWLPE-----------VLQGASLKTAL-IIATWQKLAPLSLlymaHNSIIPALLLT 143
Cdd:PRK06458 211 TlmklAFVFLLIGFGTKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALyAVLRYYILIDAAI----GSDFPGRLLLI 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 144 MAVFSVITGGWGGLNQTQTRKIMAFSSIAHLGWMTSILAMNPniTLLNLALYIIMT------TSMFLT----LMFTSSKT 213
Cdd:PRK06458 287 FGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGG--PLGIFAALLHMLnhsltkSAIFFAsgnvLQKYGTRD 364
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1036243727 214 IKDLTTSWTVSPSTTALMLLLLMSMGGLPPMTGFMPKWLILQELMTHSLTTTTTVMALSTLLSL 277
Cdd:PRK06458 365 INVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAF 428
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
278-328 |
1.92e-06 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 44.17 E-value: 1.92e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 1036243727 278 FFYLRLSYISTLTISPTTSKDPHKWRFQPKLSTSLMNMATAMSVLLLPLTP 328
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLLLPTLTTLSILLLPLTP 51
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
5-177 |
2.58e-06 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 48.98 E-value: 2.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 5 VITMS--SSHWLLAWVGLELNTLAIVPVISKHHHPRSTEATTKYFLTQAAA------SALVLFASTTNAWSTGTWDITQL 76
Cdd:PRK08676 114 VITFAffSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNWTEL 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 77 TDQQ----------ACALLTTALAMKLGLAPLHFWLPEVLQGA-SLKTALIIATWQKLAPLSLLYM-------AHNSIIP 138
Cdd:PRK08676 194 AAHAsllspsvlgaSFLFIFIGFLAKSGLVPFHTWLPAAYAKApSVVSALLSGTVLNIGIYGILRLsallrqsGAAEQFS 273
|
170 180 190
....*....|....*....|....*....|....*....
gi 1036243727 139 ALLLTMAVFSVITGGWGGLNQTQTRKIMAFSSIAHLGWM 177
Cdd:PRK08676 274 NVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLM 312
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
2-285 |
8.35e-06 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 47.30 E-value: 8.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 2 AGTVITMSSSHWLLAWVGLELNTLA---IVPVISKhhhpRSTEATTKYFLTQAAASALVLFASTTNAWSTGTWDI----- 73
Cdd:PRK08668 109 AGVLGVFLANDLLTLYIFWEIMTFSsfmMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFadisq 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 74 -----TQLTDQQACALLTTALAM-KLGLAPLHFWLPE-----------VLQGASLKT-ALIIATWQKLAPLSLLYMAHNS 135
Cdd:PRK08668 185 glindTSTGFALIVFLFLLAFGVaKAGIFPLHVWAPDayseapqsfsaVLSGQLSKLgAYGFLLVLYVLPGTKLFSEFGT 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 136 IIPALLLT-----MAVFSVITGGWGGLNQTQTRKIMAFSSIAHLGWMTSILAMNPNITLLNlALYIIMTTSMFLTLMFTS 210
Cdd:PRK08668 265 YRGVPLFNyilawLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAG-GLFHVFNHALFKGLFFLI 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 211 SKTIKDLTTSWTVS---------PSTTALMLLLLMSMGGLPPMTGFMPKWLILQELMTHSLTTTTTVMALSTLLSLFFYL 281
Cdd:PRK08668 344 FAAVIYRTGTTKISemggliekmPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVF 423
|
....
gi 1036243727 282 RLSY 285
Cdd:PRK08668 424 RPLA 427
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
141-283 |
1.14e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 46.65 E-value: 1.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 141 LLTMAVFSVITGGWGGLNQTQTRKIMAFSSIAHLGWMTSILAMNPNITLLNLALYII----MTTSMFLTLMFTSSK---- 212
Cdd:PRK12662 282 FMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVnhsiVKSALFMVSGSISYHfgtt 361
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1036243727 213 TIKDLTTSWTVSPSTTALMLLLLMSMGGLPPMTGFMPKWLILQELMTHSLTTTTTVMALSTLLSLFFYLRL 283
Cdd:PRK12662 362 KLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKI 432
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
83-283 |
1.38e-05 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 46.48 E-value: 1.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 83 ALLTTALAMKLGLAPLhFWLPEVLQGASLK-TALIIATWQK------LAPLSLLYMAHNSIIPALLLTMAVFSVITGGWG 155
Cdd:PRK12663 211 LLFLLAFGMKAALFPF-MWLPAAYHTPNTEvAALFAALLTKvgiyalIRVFTLLFPQERELLHPLLATMAAITMVIGALG 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 156 GLNQTQTRKIMAFSSIAHLGWMTSILAMNpNITLLNLALY-----IIMTTSMFLTL----MFTSSKTIKDLTTSWTVSPS 226
Cdd:PRK12663 290 ALAYKDIRRIAGYQVISSIGFILLGLALG-TPAGINGAIFylvhdMVVKTALFLIAgslvRLTGYRSLQYLGGLYRKEPL 368
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1036243727 227 TTALMLLLLMSMGGLPPMTGFMPKWLILQELMTHSLTTTTTVMALSTLLSLFFYLRL 283
Cdd:PRK12663 369 FGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLFRI 425
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
17-176 |
1.80e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 46.10 E-value: 1.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 17 WVGLELNTLAIVPVISkhhHPRSTEATT---KYFLTQAAASALVLFASTTNAWSTGTWDITQLT--DQQACALLTTALAM 91
Cdd:PRK07234 120 YVALEVLSIATFLLVA---YPRTDRAIWvglRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLAtaDPEAFALIALGLLV 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 92 KLGLAPLHFWLPE-----------VLQGASLKTALiiatwqklapLSLLYMAHNSIIPALLLTM-AVFSVITGGWGGLNQ 159
Cdd:PRK07234 197 KGGIFVSGLWLPLthseaeppvsaLLSGVVVKAGV----------FPLVRCALDVPGLDLIVRIfGVGTALLGVLFALLE 266
|
170
....*....|....*..
gi 1036243727 160 TQTRKIMAFSSIAHLGW 176
Cdd:PRK07234 267 KDLKRMLAFSTISQLGF 283
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
37-250 |
2.88e-05 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 45.43 E-value: 2.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 37 PRSTEATTKYFLTQAAASALVLFAST---------TNAWSTGTWDITQLTDQQACALL--TTALAMKLGLAPLHFWLPEV 105
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYGSSllyglsggsTQLSAIALALITSPSLGLALALVfvIAGIAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 106 LQGASLKTALIIATWQKLA----PLSLLYMAHNSIIP---ALLLTMAVFSVITGGWGGLNQTQTRKIMAFSSIAHLGWMT 178
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAgfalAIRLLVTAFPSFDEqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 179 SILAMNPN----ITLLNLALYIIMTTSMFLTLMFTSSKT----IKDLTTSWTVSPSTTALMLLLLMSMGGLPPMTGFMPK 250
Cdd:PRK02504 317 IGLVAGTEagyaSMVFYLLAYLFMNLGAFACVILFSLRTgtdqISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
42-184 |
3.37e-05 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 45.19 E-value: 3.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 42 ATTKYFLTQAAASALVLFA----STTNAWSTGTWDITQLTDQQACALLTTAL--------AMKLGLAPLHFWLPE----- 104
Cdd:PRK05846 162 AATKFFLYTLLGSLLMLVAiiylVVVYYNATGTFDIADLLNLPLPPGVQYWLflaffiafAVKMPMFPLHTWLPDahvqa 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 105 ------VLQGASLKTA----------LIIATWQKLAPlsllymahnsiipaLLLTMAVFSVITGGWGGLNQTQTRKIMAF 168
Cdd:PRK05846 242 ptagsvLLAGILLKMGaygllrfslpLFPDASHEFAP--------------IIITLGVIAIIYGALVALAQTDIKKLIAY 307
|
170
....*....|....*..
gi 1036243727 169 SSIAHLGWMT-SILAMN 184
Cdd:PRK05846 308 SSISHMGFVTlGIFAGN 324
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
85-250 |
9.97e-05 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 44.26 E-value: 9.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 85 LTTALAMKLGLA--------PLHFWLPEVLQGASLKTALIIATWQKLAPLSLLY-----MAHNSIIPALLLTMAVFSVIT 151
Cdd:PRK12650 206 LTTVVAVLIAVAaftksaqfPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLrfspvFHDVAVWNWLLIIVGMITALM 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 152 GGWGGLNQTQTRKIMAFSSIAHLGWmtsILAMNPNITLLNLALYIIMTTS--MFLTLMF---------TSSKTIKDLTTS 220
Cdd:PRK12650 286 GAVFAVQKTDLKKLTAYSTVSQLGW---IVATIGVGTPFALTAAVVHTLAhaLFKSSLFmligvvdhqAGTRDIRRLGSL 362
|
170 180 190
....*....|....*....|....*....|
gi 1036243727 221 WTVSPSTTALMLLLLMSMGGLPPMTGFMPK 250
Cdd:PRK12650 363 WRRMPFTFVSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
66-211 |
1.11e-04 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 43.86 E-value: 1.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 66 WSTGTWDITQLTDQQACALLTTALAMKLGLA----------------PLHFWLPEVLQGASLKTALIIATWQKLAPLSLL 129
Cdd:PRK07376 198 WATGSFDFDGIADRLSELVSSGAVSGWLALLlcilvflgpmaksaqfPLHVWLPDAMEGPTPISALIHAATMVAAGVFLV 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 130 YMAHN--SIIPALLLTMAVFSVITGGWG---GLNQTQTRKIMAFSSIAHLGWMtsILAMnpNITLLNLALYIIMTTSMFL 204
Cdd:PRK07376 278 ARMYPvfEQFPAVMTVIAWTGAITAFLGasiALTQNDIKKGLAYSTISQLGYM--VMAM--GCGAYSAGLFHLMTHAYFK 353
|
....*..
gi 1036243727 205 TLMFTSS 211
Cdd:PRK07376 354 AMLFLGS 360
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
65-283 |
1.52e-04 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 43.22 E-value: 1.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 65 AWSTGTWDITQLTDQ----QACALLTTALAM-------KLGLAPLHFWLPEVLQGASLKTALI-IATWQK-----LAPLS 127
Cdd:COG1009 186 GAIAGTLNFSELLAAaptiLSSPLLTLILLLlllgafgKSAQFPLHFWLPDAMEGPTPVSALLhAATMVKagvylLARLS 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 128 LLYmahnSIIPALLLTMAVFSVIT---GGWGGLNQTQTRKIMAFSSIAHLGWMTSILAMNpnitLLNLALYIIMTTSMFL 204
Cdd:COG1009 266 PLF----ALSPVWLTVVAIIGAITalfAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG----AYVAALFHLLTHAFFK 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 205 TLMF---------TSSKTIKDLTTSWTVSPSTTALMLLLLMSMGGLPPMTGFMPKWLILQELM-THSLTTTTTVMALST- 273
Cdd:COG1009 338 ALLFlgagsvihaTGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALeAGGLGPLLLAVALLGa 417
|
250
....*....|
gi 1036243727 274 LLSLFFYLRL 283
Cdd:COG1009 418 FLTAFYSFRL 427
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
88-208 |
1.69e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 42.99 E-value: 1.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 88 ALAMKLGLAPLHFWLPEVLQGASLKTALIIA-TWQKLAPLSL-------LYMAHNSIIPAlLLTMAVFSVITGGWGGLNQ 159
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAgILLKLGGYGLvrlswpiLPLGAQNLAPA-VIAMGIVGIVYGSFATCRQ 317
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1036243727 160 TQTRKIMAFSSIAHLGwMTSILAMNPNITLLNLALYIIMTTSMFLTLMF 208
Cdd:MTH00226 318 IDVKRLVAYSSVAHMG-LVSITLVTHDIIGLTGSIFIMLAHGIVSSLLF 365
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
98-255 |
1.97e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 43.02 E-value: 1.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 98 LHFWLPEVLQGASLKTALIIATWQKLAPLSLLYMAHNSI--IPALLLTMAVFSVITGGWG---GLNQTQTRKIMAFSSIA 172
Cdd:MTH00032 244 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFekAPLTLLIITIFGALTAFFAatvGLVQNDLKKVIAYSTCS 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 173 HLGWMTSILAMNPNitlLNLALYIIMTTSMFLTLMFTSSKTIKDLTTS-----------WTVSPSTTALMLLLLMSMGGL 241
Cdd:MTH00032 324 QLGYMVLIIGIEGS---HNVGLFHLVNHAFFKALLFLSAGSVIHSTTVdeqdmrkmgglIHSIPFTYTMMLIGSFSIMGL 400
|
170
....*....|....
gi 1036243727 242 PPMTGFMPKWLILQ 255
Cdd:MTH00032 401 PYLTGFYSKDLILE 414
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
83-204 |
5.26e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 41.49 E-value: 5.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 83 ALLTTALAMKLGLAPLHFWLPEVLQGA-SLKTALIIATWQKLAPLSLLyMAHNSIIPA-----LLLTMAVFSVITGGWGG 156
Cdd:PRK12665 213 AVLLVAFGIKAAVFPLSFWLPDSYPTApAPVTAVFAGLLTKVGVYAII-RTHTLLFPGggldtLLMVVALLTMVVGILGA 291
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1036243727 157 LNQTQTRKIMAFSSIAHLGWMTSILAMNPNITLLNLALY----IIMTTSMFL 204
Cdd:PRK12665 292 IAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYvahhITVQTTLFL 343
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
42-208 |
1.02e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 40.85 E-value: 1.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 42 ATTKYFLTQAAASALVLFASTTNAWSTG----------TWDITQLTDQQACALLTTALAMKLGLAPLHFWLPEVLQGASL 111
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGstsfdydaisTQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 112 KTALIIA-TWQKLAPLSLLYMAHN------SIIPALLLTMAVFSVITGGWGGLNQTQTRKIMAFSSIAHLGWMTSILAMN 184
Cdd:PRK07363 238 AVAILLGgVLAKLGTYGLLRFGLQlfpqtwSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAG 317
|
170 180
....*....|....*....|....
gi 1036243727 185 PNITLLNlALYIIMTTSMFLTLMF 208
Cdd:PRK07363 318 TQLSLLG-AVAQMISHGLILALLF 340
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
67-271 |
1.35e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 40.68 E-value: 1.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 67 STGTWDITQL-TDQQACALLTTALAM-------KLGLAPLHFWLPEV----------LQGASLKTALI--IAtwqKLAPL 126
Cdd:PRK12644 183 AAGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAmaaptpvsayLHAAAMVKAGIylVA---RLAPG 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 127 sllyMAHNSIIPALLLTMAVFSVITGGWGGLNQTQTRKIMAFSSIAHLGWMTSILAM-NPNITLLNLALyiIMTTSMFLT 205
Cdd:PRK12644 260 ----FADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIgTRDAALAGLAM--LLAHALFKA 333
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1036243727 206 LMF---------TSSKTIKDLTTSWTVSPSTTALMLLLLMSMGGLPPMTGFMPKWLILQELMTHSLTTTTTVMAL 271
Cdd:PRK12644 334 ALFlvvgiidhsTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVLHDGALGPAGPVVL 408
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
39-183 |
1.87e-03 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 39.75 E-value: 1.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 39 STEATTKYFLTQAAASALVLFASTTNAWSTGTWDITQLTD----------QQACALLTTALAMKLGLAPLHFWLPEVLQG 108
Cdd:PRK08377 156 AAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQlagtidptvaQVGLALLIFGLAVEAELFPLNAWAPDAYQA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 109 ASLKTALIIATWQKLAPL----SLLYMAHN----SIIPALLLTMAVFSVITGGWGGLNQTQTRKIMAFSSIAHLGWMTSI 180
Cdd:PRK08377 236 APHPITVMFSAFVVKAGLyamaRILYLMQNangwSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALA 315
|
...
gi 1036243727 181 LAM 183
Cdd:PRK08377 316 LAL 318
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
43-283 |
2.30e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 39.55 E-value: 2.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 43 TTKYFLTQAAASALVLFASTTNAWSTGTWD-------ITQLTDQQACALLTTAL------AMKLGLAPLHFWLPEVLQG- 108
Cdd:PRK07691 160 SIKYVLINVVSSAFFVVAVAILYSVVGTLNmadisvkIAELSAGQTGLITVVAIlflfvfATKAGLFPLYFWLPGSYYAp 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 109 ----ASLKTALI--IATWQKLAPLSLLYMAHNSIIPALLLTMAVFSVITGGWGGLNQTQTRKIMAFSSIAHLGWMTSILA 182
Cdd:PRK07691 240 piaiAALFGALLtkVGVYAIARTFTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVA 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 183 MNPNITLLNLALY----IIMTTSMFL----TLMFTSSKTIKDLTTSWTVSPSTTALMLLLLMSMGGLPPMTGFMPKWLIL 254
Cdd:PRK07691 320 MMTESGMIGAIYYlihdMIVKAALFLligiMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIV 399
|
250 260
....*....|....*....|....*....
gi 1036243727 255 QELMTHSLTTTTTVMALSTLLSLFFYLRL 283
Cdd:PRK07691 400 EGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
98-290 |
2.35e-03 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 39.68 E-value: 2.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 98 LHFWLPEVLQGASLKTALIIATWQKLAPLSLLYMAHNSIIPALLLTMAV-----FSVITGGWGGLNQTQTRKIMAFSSIA 172
Cdd:MTH00020 229 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVtivgsLTVFFAATVGLVQNDLKKVIAYSTCS 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 173 HLGWMTsilaMNPNITLLNLALYIIMTTSMFLTLMFTSSKTI-------KDLTTSWTVS---PSTTALMLLLLMSMGGLP 242
Cdd:MTH00020 309 QLGYMV----VACGLSHYSISLFHLMNHAFFKALLFLSAGSVihalsdeQDMRKMGGLIsflPLTYIFFLIGSLSLMGFP 384
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1036243727 243 PMTGFMPKWLILQ-ELMTHSLTTTTTVMALSTLLSLFFYLRLSYISTLT 290
Cdd:MTH00020 385 YLTGFYSKDLILElAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLS 433
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
88-178 |
3.72e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 38.88 E-value: 3.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 88 ALAMKLGLAPLHFWLPE-----------VLQGASLKT---ALIIATWqKLAPLSLLYMAhnsiipALLLTMAVFSVITGG 153
Cdd:MTH00217 215 SLAIKIPKIPFHIWLPQahveapvagsvILAGVLLKLggyGFIRFSW-PLLPEASEYFS------PLIQTLSLLAIIYGS 287
|
90 100
....*....|....*....|....*
gi 1036243727 154 WGGLNQTQTRKIMAFSSIAHLGWMT 178
Cdd:MTH00217 288 LTTCRQVDLKRIIAYSSVAHMGLVT 312
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
42-176 |
3.82e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 38.92 E-value: 3.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1036243727 42 ATTKYFLTQAAASALVLFASTTNAWSTGT--WDITQL-------TDQQAC-ALLTTALAMKLGLAPLHFWLPEVLQGASL 111
Cdd:PRK02546 166 AATKFILYTAGSSLFILLAALAMAFYGDTptFDMTALaakdfglGFQLLCyAGLLIAYGVKLPIVPLHTWLPDAHGEATA 245
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1036243727 112 KTALIIA-TWQKLAPLSLLYM-------AHNSIIPaLLLTMAVFSVITGGWGGLNQTQTRKIMAFSSIAHLGW 176
Cdd:PRK02546 246 PVHMLLAgILLKMGGYALLRMnagmlpdAHAQFAP-LLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGF 317
|
|
| |
