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Conserved domains on  [gi|1070715488|gb|AOS60306|]
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cytochrome b, partial (mitochondrion) [Desmodus rotundus]

Protein Classification

cytochrome b( domain architecture ID 11475898)

cytochrome b is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), a respiratory chain that generates an electrochemical potential coupled to ATP synthesis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CYTB MTH00100
cytochrome b; Provisional
 1-377 0e+00

cytochrome b; Provisional


:

Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 717.57  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488   1 HPRKTHPMLKIINNSLTDLPTPSSLSTWWNFGSLLGICLTTQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWALRYL 80
Cdd:MTH00100    3 NIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488  81 HANGASMFFICLYLHVGRGLYYGSYTYLETWNIGILLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQ 160
Cdd:MTH00100   83 HANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 161 WIWGGFSVDKATLSRFFTFHFLLPFIISALVAVHLLFLHETGSNNPTGIPSDPDTIPFHPYFTIKDILGFLMMLTLLLTL 240
Cdd:MTH00100  163 WIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLL 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 241 TLFSPDLLGDPDNYTQANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALTMSILILTILPLLHTSKQRSMTFRPLSQ 320
Cdd:MTH00100  243 VLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQ 322

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1070715488 321 CLFWLLAATLLTLTWIGGQPVEHPYIIIGQTASILYFLTLLALMPLTSTLENHLLKW 377
Cdd:MTH00100  323 CLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLKW 379
 
Name Accession Description Interval E-value
CYTB MTH00100
cytochrome b; Provisional
 1-377 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 717.57  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488   1 HPRKTHPMLKIINNSLTDLPTPSSLSTWWNFGSLLGICLTTQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWALRYL 80
Cdd:MTH00100    3 NIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488  81 HANGASMFFICLYLHVGRGLYYGSYTYLETWNIGILLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQ 160
Cdd:MTH00100   83 HANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 161 WIWGGFSVDKATLSRFFTFHFLLPFIISALVAVHLLFLHETGSNNPTGIPSDPDTIPFHPYFTIKDILGFLMMLTLLLTL 240
Cdd:MTH00100  163 WIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLL 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 241 TLFSPDLLGDPDNYTQANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALTMSILILTILPLLHTSKQRSMTFRPLSQ 320
Cdd:MTH00100  243 VLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQ 322

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1070715488 321 CLFWLLAATLLTLTWIGGQPVEHPYIIIGQTASILYFLTLLALMPLTSTLENHLLKW 377
Cdd:MTH00100  323 CLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLKW 379
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
9-371 1.11e-123

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 362.19  E-value: 1.11e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488   9 LKIINNSLTDLPTPSSLSTWWNFGSLLGICLTTQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWALRYLHANGASMF 88
Cdd:COG1290    20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488  89 FICLYLHVGRGLYYGSYTY---LeTWNIGILLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGG 165
Cdd:COG1290   100 FAAVYLHMFRGFFYGAYKKpreL-NWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGG 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 166 FSVDKATLSRFFTFH-FLLPFIISALVAVHLLFLHETGSNNPTGI----PSDPDTIPFHPYFTIKDILGFLMMLTLLLTL 240
Cdd:COG1290   179 EFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALL 258

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 241 TLFSPDllGDPDNYTQANPLNTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALTMSILILTILPLLHTSKQRSMTFRPL 318
Cdd:COG1290   259 AFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPV 336

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1070715488 319 SQCLFWLLAATLLTLTWIGGQPVehPYIIIGQTASILYFLTLLALMPLTSTLE 371
Cdd:COG1290   337 RTALGVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 7-204 3.01e-96

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 285.03  E-value: 3.01e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488   7 PMLKIINNSLTDLPTPSSLSTWWNFGSLLGICLTTQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWALRYLHANGAS 86
Cdd:cd00284     1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488  87 MFFICLYLHVGRGLYYGSY--TYLETWNIGILLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWG 164
Cdd:cd00284    81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1070715488 165 GFSVDKATLSRFFTFHFLLPFIISALVAVHLLFLHETGSN 204
Cdd:cd00284   161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
16-202 1.88e-87

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 262.32  E-value: 1.88e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488  16 LTDLPTPSSLSTWWNFGSLLGICLTTQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWALRYLHANGASMFFICLYLH 95
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488  96 VGRGLYYGSYTYL--ETWNIGILLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATL 173
Cdd:pfam00033  81 IFRGLYYGGFSYPreLTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 1070715488 174 SRFFTFHFLLPFIISALVAVHLLFLHETG 202
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 245-294 2.19e-07

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 50.18  E-value: 2.19e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 1070715488 245 PDLLGDPdnytqANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALTM 294
Cdd:TIGR01156  59 PAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAA 103
 
Name Accession Description Interval E-value
CYTB MTH00100
cytochrome b; Provisional
 1-377 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 717.57  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488   1 HPRKTHPMLKIINNSLTDLPTPSSLSTWWNFGSLLGICLTTQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWALRYL 80
Cdd:MTH00100    3 NIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488  81 HANGASMFFICLYLHVGRGLYYGSYTYLETWNIGILLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQ 160
Cdd:MTH00100   83 HANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 161 WIWGGFSVDKATLSRFFTFHFLLPFIISALVAVHLLFLHETGSNNPTGIPSDPDTIPFHPYFTIKDILGFLMMLTLLLTL 240
Cdd:MTH00100  163 WIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLL 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 241 TLFSPDLLGDPDNYTQANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALTMSILILTILPLLHTSKQRSMTFRPLSQ 320
Cdd:MTH00100  243 VLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQ 322

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1070715488 321 CLFWLLAATLLTLTWIGGQPVEHPYIIIGQTASILYFLTLLALMPLTSTLENHLLKW 377
Cdd:MTH00100  323 CLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLKW 379
CYTB MTH00119
cytochrome b; Provisional
 2-377 0e+00

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 661.98  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488   2 PRKTHPMLKIINNSLTDLPTPSSLSTWWNFGSLLGICLTTQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWALRYLH 81
Cdd:MTH00119    5 LRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLH 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488  82 ANGASMFFICLYLHVGRGLYYGSYTYLETWNIGILLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQW 161
Cdd:MTH00119   85 ANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEW 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 162 IWGGFSVDKATLSRFFTFHFLLPFIISALVAVHLLFLHETGSNNPTGIPSDPDTIPFHPYFTIKDILGFLMMLTLLLTLT 241
Cdd:MTH00119  165 IWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLA 244

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 242 LFSPDLLGDPDNYTQANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALTMSILILTILPLLHTSKQRSMTFRPLSQC 321
Cdd:MTH00119  245 LFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQL 324

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1070715488 322 LFWLLAATLLTLTWIGGQPVEHPYIIIGQTASILYFLTLLALMPLTSTLENHLLKW 377
Cdd:MTH00119  325 LFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALENKMLNY 380
CYTB MTH00131
cytochrome b; Provisional
 3-377 0e+00

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 649.02  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488   3 RKTHPMLKIINNSLTDLPTPSSLSTWWNFGSLLGICLTTQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWALRYLHA 82
Cdd:MTH00131    5 RKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488  83 NGASMFFICLYLHVGRGLYYGSYTYLETWNIGILLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWI 162
Cdd:MTH00131   85 NGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWI 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 163 WGGFSVDKATLSRFFTFHFLLPFIISALVAVHLLFLHETGSNNPTGIPSDPDTIPFHPYFTIKDILGFLMMLTLLLTLTL 242
Cdd:MTH00131  165 WGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLAL 244

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 243 FSPDLLGDPDNYTQANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALTMSILILTILPLLHTSKQRSMTFRPLSQCL 322
Cdd:MTH00131  245 FSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFL 324

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1070715488 323 FWLLAATLLTLTWIGGQPVEHPYIIIGQTASILYFLTLLALMPLTSTLENHLLKW 377
Cdd:MTH00131  325 FWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALEW 379
CYTB MTH00074
cytochrome b; Provisional
 3-377 0e+00

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 640.58  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488   3 RKTHPMLKIINNSLTDLPTPSSLSTWWNFGSLLGICLTTQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWALRYLHA 82
Cdd:MTH00074    6 RKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHA 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488  83 NGASMFFICLYLHVGRGLYYGSYTYLETWNIGILLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWI 162
Cdd:MTH00074   86 NGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWI 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 163 WGGFSVDKATLSRFFTFHFLLPFIISALVAVHLLFLHETGSNNPTGIPSDPDTIPFHPYFTIKDILGFLMMLTLLLTLTL 242
Cdd:MTH00074  166 WGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSL 245

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 243 FSPDLLGDPDNYTQANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALTMSILILTILPLLHTSKQRSMTFRPLSQCL 322
Cdd:MTH00074  246 FSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQIL 325

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1070715488 323 FWLLAATLLTLTWIGGQPVEHPYIIIGQTASILYFLTLLALMPLTSTLENHLLKW 377
Cdd:MTH00074  326 FWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKLLKW 380
CYTB MTH00191
cytochrome b; Provisional
 3-366 0e+00

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 609.61  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488   3 RKTHPMLKIINNSLTDLPTPSSLSTWWNFGSLLGICLTTQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWALRYLHA 82
Cdd:MTH00191    2 RKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488  83 NGASMFFICLYLHVGRGLYYGSYTYLETWNIGILLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWI 162
Cdd:MTH00191   82 NGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWL 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 163 WGGFSVDKATLSRFFTFHFLLPFIISALVAVHLLFLHETGSNNPTGIPSDPDTIPFHPYFTIKDILGFLMMLTLLLTLTL 242
Cdd:MTH00191  162 WGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVL 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 243 FSPDLLGDPDNYTQANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALTMSILILTILPLLHTSKQRSMTFRPLSQCL 322
Cdd:MTH00191  242 FSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVV 321

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 1070715488 323 FWLLAATLLTLTWIGGQPVEHPYIIIGQTASILYFLTLLALMPL 366
Cdd:MTH00191  322 FWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFPL 365
CYTB MTH00156
cytochrome b; Provisional
 9-358 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 602.54  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488   9 LKIINNSLTDLPTPSSLSTWWNFGSLLGICLTTQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWALRYLHANGASMF 88
Cdd:MTH00156    1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488  89 FICLYLHVGRGLYYGSYTYLETWNIGILLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSV 168
Cdd:MTH00156   81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 169 DKATLSRFFTFHFLLPFIISALVAVHLLFLHETGSNNPTGIPSDPDTIPFHPYFTIKDILGFLMMLTLLLTLTLFSPDLL 248
Cdd:MTH00156  161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 249 GDPDNYTQANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALTMSILILTILPLLHTSKQRSMTFRPLSQCLFWLLAA 328
Cdd:MTH00156  241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320

                         330       340       350
                  ....*....|....*....|....*....|
gi 1070715488 329 TLLTLTWIGGQPVEHPYIIIGQTASILYFL 358
Cdd:MTH00156  321 IVILLTWIGARPVEEPYILTGQILTILYFL 350
CYTB MTH00034
cytochrome b; Validated
 3-375 0e+00

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 582.05  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488   3 RKTHPMLKIINNSLTDLPTPSSLSTWWNFGSLLGICLTTQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWALRYLHA 82
Cdd:MTH00034    5 RKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488  83 NGASMFFICLYLHVGRGLYYGSYTYLETWNIGILLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWI 162
Cdd:MTH00034   85 NGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWI 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 163 WGGFSVDKATLSRFFTFHFLLPFIISALVAVHLLFLHETGSNNPTGIPSDPDTIPFHPYFTIKDILGFLMMLTLLLTLTL 242
Cdd:MTH00034  165 WGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLAL 244

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 243 FSPDLLGDPDNYTQANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALTMSILILTILPLLHTSKQRSMTFRPLSQCL 322
Cdd:MTH00034  245 LFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIA 324

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1070715488 323 FWLLAATLLTLTWIGGQPVEHPYIIIGQTASILYFLTLLALMPLTSTLENHLL 375
Cdd:MTH00034  325 FWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLENKLI 377
CYTB MTH00145
cytochrome b; Provisional
 3-375 0e+00

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 578.01  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488   3 RKTHPMLKIINNSLTDLPTPSSLSTWWNFGSLLGICLTTQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWALRYLHA 82
Cdd:MTH00145    6 RKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHA 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488  83 NGASMFFICLYLHVGRGLYYGSYTYLETWNIGILLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWI 162
Cdd:MTH00145   86 NGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWV 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 163 WGGFSVDKATLSRFFTFHFLLPFIISALVAVHLLFLHETGSNNPTGIPSDPDTIPFHPYFTIKDILGFLMMLTLLLTLTL 242
Cdd:MTH00145  166 WGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVL 245

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 243 FSPDLLGDPDNYTQANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALTMSILILTILPLLHTSKQRSMTFRPLSQCL 322
Cdd:MTH00145  246 FFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVL 325

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1070715488 323 FWLLAATLLTLTWIGGQPVEHPYIIIGQTASILYFLTLLaLMPLTSTLENHLL 375
Cdd:MTH00145  326 FWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFL-ILPLVQKLWDNIL 377
CYTB MTH00016
cytochrome b; Validated
 3-376 0e+00

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 548.12  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488   3 RKTHPMLKIINNSLTDLPTPSSLSTWWNFGSLLGICLTTQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWALRYLHA 82
Cdd:MTH00016    6 RKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHA 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488  83 NGASMFFICLYLHVGRGLYYGSYTYLETWNIGILLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWI 162
Cdd:MTH00016   86 NGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWL 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 163 WGGFSVDKATLSRFFTFHFLLPFIISALVAVHLLFLHETGSNNPTGIPSDPDTIPFHPYFTIKDILGFLMMLTLLLTLTL 242
Cdd:MTH00016  166 WGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVL 245

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 243 FSPDLLGDPDNYTQANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALTMSILILTILPLLHTSKQRSMTFRPLSQCL 322
Cdd:MTH00016  246 LWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQIL 325

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1070715488 323 FWLLAATLLTLTWIGGQPVEHPYIIIGQTASILYFlTLLALMPLTSTLENHLLK 376
Cdd:MTH00016  326 FWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYF-FYFMINPLLMKLWDKLLK 378
CYTB MTH00022
cytochrome b; Validated
 3-376 0e+00

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 506.55  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488   3 RKTHPMLKIINNSLTDLPTPSSLSTWWNFGSLLGICLTTQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWALRYLHA 82
Cdd:MTH00022    4 RKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488  83 NGASMFFICLYLHVGRGLYYGSYTYLETWNIGILLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWI 162
Cdd:MTH00022   84 NGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWV 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 163 WGGFSVDKATLSRFFTFHFLLPFIISALVAVHLLFLHETGSNNPTGIPSDPDTIPFHPYFTIKDILGFLMMLTLLLTLTL 242
Cdd:MTH00022  164 WGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVY 243

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 243 FSPDLLGDPDNYTQANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALTMSILILTILPLLHTSKQRSMTFRPLSQCL 322
Cdd:MTH00022  244 FAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMA 323

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1070715488 323 FWLLAATLLTLTWIGGQPVEHPYIIIGQTASILYFLTLLALMPLTSTLENHLLK 376
Cdd:MTH00022  324 FWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELENQLLF 377
CYTB MTH00053
cytochrome b; Provisional
 3-376 1.52e-178

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 501.16  E-value: 1.52e-178
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488   3 RKTHPMLKIINNSLTDLPTPSSLSTWWNFGSLLGICLTTQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWALRYLHA 82
Cdd:MTH00053    6 RKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHA 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488  83 NGASMFFICLYLHVGRGLYYGSYTYLETWNIGILLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWI 162
Cdd:MTH00053   86 NGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWV 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 163 WGGFSVDKATLSRFFTFHFLLPFIISALVAVHLLFLHETGSNNPTGIPSDPDTIPFHPYFTIKDILGFLMMLTLLLTLTL 242
Cdd:MTH00053  166 WGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVF 245

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 243 FSPDLLGDPDNYTQANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALTMSILILTILPLLHTSKQRSMTFRPLSQCL 322
Cdd:MTH00053  246 LFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKIL 325

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1070715488 323 FWLLAATLLTLTWIGGQPVEHPYIIIGQTASILYFLTLLALMPLTSTLENHLLK 376
Cdd:MTH00053  326 FWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLENKLLK 379
CYTB MTH00224
cytochrome b; Provisional
 3-376 9.90e-173

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 486.35  E-value: 9.90e-173
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488   3 RKTHPMLKIINNSLTDLPTPSSLSTWWNFGSLLGICLTTQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWALRYLHA 82
Cdd:MTH00224    6 RTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHA 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488  83 NGASMFFICLYLHVGRGLYYGSYTYLETWNIGILLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWI 162
Cdd:MTH00224   86 NGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWI 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 163 WGGFSVDKATLSRFFTFHFLLPFIISALVAVHLLFLHETGSNNPTGIPSDPDTIPFHPYFTIKDILGFLMMLTLLLTLTL 242
Cdd:MTH00224  166 WGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVL 245

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 243 FSPDLLGDPDNYTQANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALTMSILILTILPLLHTSKQRSMTFRPLSQCL 322
Cdd:MTH00224  246 FEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLL 325

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1070715488 323 FWLLAATLLTLTWIGGQPVEHPYIIIGQTASILYFlTLLALMPLTSTLENHLLK 376
Cdd:MTH00224  326 FWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYF-SYFIISPAISKLWDDLLN 378
CYTB MTH00033
cytochrome b; Provisional
 14-372 6.09e-135

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 390.45  E-value: 6.09e-135
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488  14 NSLTDLPTPSSLSTWWNFGSLLGICLTTQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWALRYLHANGASMFFICLY 93
Cdd:MTH00033   13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488  94 LHVGRGLYYGSYTYLETWNIGILLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATL 173
Cdd:MTH00033   93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 174 SRFFTFHFLLPFIISALVAVHLLFLHETGSNNPTGIPSDPDTIPFHPYFTIKDILGFLMMLTLLLTLTLFS--PDLLGDP 251
Cdd:MTH00033  173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEPriETLLQDP 252

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 252 DNYTQANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALTMSILILTILPLLHTSKQRSMTFRPLSQCLFWLLAATLL 331
Cdd:MTH00033  253 ENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFI 332

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 1070715488 332 TLTWIGGQPV-EHPYIIIGQTASILYFLTLLALMPLTSTLEN 372
Cdd:MTH00033  333 ILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYLSN 374
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
9-371 1.11e-123

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 362.19  E-value: 1.11e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488   9 LKIINNSLTDLPTPSSLSTWWNFGSLLGICLTTQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWALRYLHANGASMF 88
Cdd:COG1290    20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488  89 FICLYLHVGRGLYYGSYTY---LeTWNIGILLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGG 165
Cdd:COG1290   100 FAAVYLHMFRGFFYGAYKKpreL-NWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGG 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 166 FSVDKATLSRFFTFH-FLLPFIISALVAVHLLFLHETGSNNPTGI----PSDPDTIPFHPYFTIKDILGFLMMLTLLLTL 240
Cdd:COG1290   179 EFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALL 258

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 241 TLFSPDllGDPDNYTQANPLNTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALTMSILILTILPLLHTSKQRSMTFRPL 318
Cdd:COG1290   259 AFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPV 336

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1070715488 319 SQCLFWLLAATLLTLTWIGGQPVehPYIIIGQTASILYFLTLLALMPLTSTLE 371
Cdd:COG1290   337 RTALGVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
CYTB MTH00086
cytochrome b; Provisional
 10-364 1.20e-117

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 345.39  E-value: 1.20e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488  10 KIINNSLTDLPTPSSLSTWWNFGSLLGICLTTQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWALRYLHANGASMFF 89
Cdd:MTH00086    1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488  90 ICLYLHVGRGLYYGSYTYLETWNIGILLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVD 169
Cdd:MTH00086   81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 170 KATLSRFFTFHFLLPFIISALVAVHLLFLHETGSNNPTGIPSDPDTIPFHPYFTIKDILGFlMMLTLLLTLTLFSPDLLG 249
Cdd:MTH00086  161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNI-IFWLVFIIFSLFYPFNLG 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 250 DPDNYTQANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALTMSILILTILPLLHTSkqrSMTFRPLSQCLFWLLAAT 329
Cdd:MTH00086  240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNY---TSCLNKLNKFLVFSFIVV 316

                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1070715488 330 LLTLTWIGGQPVEHPYIIIGQTASILYFLTLLALM 364
Cdd:MTH00086  317 NVILSWLGQCLVEYPFLFLSQIFSFIYFFLILLML 351
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 7-204 3.01e-96

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 285.03  E-value: 3.01e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488   7 PMLKIINNSLTDLPTPSSLSTWWNFGSLLGICLTTQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWALRYLHANGAS 86
Cdd:cd00284     1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488  87 MFFICLYLHVGRGLYYGSY--TYLETWNIGILLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWG 164
Cdd:cd00284    81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1070715488 165 GFSVDKATLSRFFTFHFLLPFIISALVAVHLLFLHETGSN 204
Cdd:cd00284   161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
CYTB MTH00046
cytochrome b; Validated
 8-361 1.58e-91

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 278.79  E-value: 1.58e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488   8 MLKIINNSLTDLPTPSSLSTWWNFGSLLGICLTTQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWALRYLHANGASM 87
Cdd:MTH00046    1 MISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488  88 FFICLYLHVGRGLYYGSYTYLETWNIGILLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFS 167
Cdd:MTH00046   81 LFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 168 VDKATLSRFFTFHFLLPFIISALVAVHLLFLHETGSNNPTGIPSD-PDTIPFHPYFTIKDILGFLMMLTLLLTLTLFSPD 246
Cdd:MTH00046  161 VTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGySDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPD 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 247 LLGDPDNYTQANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGvLALTMSILILTILpllhTSKQRSMTFRPLSQCLFWLL 326
Cdd:MTH00046  241 LVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGG-LVLVLSFLFFLWV----PTFNGSSVYSVWRQVNFWLI 315

                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1070715488 327 AATLLTLTWIGGQPVEHPYIIIGQTASILYFLTLL 361
Cdd:MTH00046  316 VSLFFSLSYLGGCHPEYPYLLISQLFSVLMVLLLF 350
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
16-202 1.88e-87

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 262.32  E-value: 1.88e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488  16 LTDLPTPSSLSTWWNFGSLLGICLTTQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWALRYLHANGASMFFICLYLH 95
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488  96 VGRGLYYGSYTYL--ETWNIGILLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATL 173
Cdd:pfam00033  81 IFRGLYYGGFSYPreLTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 1070715488 174 SRFFTFHFLLPFIISALVAVHLLFLHETG 202
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
86-251 2.97e-46

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 155.86  E-value: 2.97e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488  86 SMFFICLYLHVGRGLYYGSYTYLE--TWNIGILLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIW 163
Cdd:pfam13631   1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 164 GGFSVDKATLSRFFTFHF-LLPFIISALVAVHLLFLHETGSNNPTGIPSDPDTIPFHPYFTIKDILGFLMMLTLLLTLTL 242
Cdd:pfam13631  81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160


                  ....*....
gi 1070715488 243 FSPDLLGDP 251
Cdd:pfam13631 161 INPIWLGGP 169
cytochrome_b_C cd00290
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 205-352 6.18e-44

Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.


Pssm-ID: 238179 [Multi-domain]  Cd Length: 147  Bit Score: 148.95  E-value: 6.18e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 205 NPTGIPSDPDTIPFHPYFTIKDILGFLMMLTLLLTLTLFSPDLLGDPDNYTQANPLNTPPHIKPEWYFLFAYAILRSIPN 284
Cdd:cd00290     1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1070715488 285 KLGGVLALTMSILILTILPLLHTSKQRSmTFRPLSQCLFWLLAATLLTLTWIGGQPVEHPYIIIGQTA 352
Cdd:cd00290    81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
PRK03735 PRK03735
cytochrome b6; Provisional
 31-206 1.85e-38

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 137.15  E-value: 1.85e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488  31 FGSLLGICLTTQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWALRYLHANGASMFFICLYLHVGRGLYYGSYTYLE- 109
Cdd:PRK03735   44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 110 -TWNIGILLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLSRFFTFH-FLLPFII 187
Cdd:PRK03735  124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203

                         170
                  ....*....|....*....
gi 1070715488 188 SALVAVHLLFLHETGSNNP 206
Cdd:PRK03735  204 AVLMLAHFLMIRKQGISGP 222
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
256-356 1.86e-34

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 122.59  E-value: 1.86e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 256 QANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALTMSILILTILPLLHTSKQRSMTFRPLSQCLFWLLAATLLTLTW 335
Cdd:pfam00032   1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80

                          90       100
                  ....*....|....*....|.
gi 1070715488 336 IGGQPVEHPYIIIGQTASILY 356
Cdd:pfam00032  81 LGKQPPTGPYTLLGQIATVYY 101
petB CHL00070
cytochrome b6
 22-206 8.31e-31

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 116.74  E-value: 8.31e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488  22 PSSLSTWWNFGSLLGICLTTQILTGLFLAMHYTSDTTTAFNSVAHICRDVNYGWALRYLHANGASMFFICLYLHVGRGLY 101
Cdd:CHL00070   27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070715488 102 YGSYTYLE--TWNIGILLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLSRFFTF 179
Cdd:CHL00070  107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186

                         170       180
                  ....*....|....*....|....*...
gi 1070715488 180 H-FLLPFIISALVAVHLLFLHETGSNNP 206
Cdd:CHL00070  187 HtFVLPLLTAVFMLMHFLMIRKQGISGP 214
petD CHL00058
cytochrome b6/f complex subunit IV
 245-293 1.87e-08

cytochrome b6/f complex subunit IV


Pssm-ID: 176998  Cd Length: 160  Bit Score: 53.08  E-value: 1.87e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 1070715488 245 PDLLGDPdnytqANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALT 293
Cdd:CHL00058   59 PSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMA 102
PetD COG5679
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ...
 245-293 2.20e-08

Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];


Pssm-ID: 444393 [Multi-domain]  Cd Length: 161  Bit Score: 52.87  E-value: 2.20e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 1070715488 245 PDLLGDPdnytqANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALT 293
Cdd:COG5679    60 PAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMA 103
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 245-294 2.19e-07

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 50.18  E-value: 2.19e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 1070715488 245 PDLLGDPdnytqANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALTM 294
Cdd:TIGR01156  59 PAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAA 103
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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