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Conserved domains on  [gi|1104679576|gb|APD33330|]
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dentin matrix acidic phosphoprotein 1, partial [Scapanulus oweni]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DMP1 super family cl25845
Dentin matrix protein 1 (DMP1); This family consists of several mammalian dentin matrix ...
1-301 3.92e-55

Dentin matrix protein 1 (DMP1); This family consists of several mammalian dentin matrix protein 1 (DMP1) sequences. The dentin matrix acidic phosphoprotein 1 (DMP1) gene has been mapped to human chromosome 4q21. DMP1 is a bone and teeth specific protein initially identified from mineralized dentin. DMP1 is primarily localized in the nuclear compartment of undifferentiated osteoblasts. In the nucleus, DMP1 acts as a transcriptional component for activation of osteoblast-specific genes like osteocalcin. During the early phase of osteoblast maturation, Ca(2+) surges into the nucleus from the cytoplasm, triggering the phosphorylation of DMP1 by a nuclear isoform of casein kinase II. This phosphorylated DMP1 is then exported out into the extracellular matrix, where it regulates nucleation of hydroxyapatite. DMP1 is a unique molecule that initiates osteoblast differentiation by transcription in the nucleus and orchestrates mineralized matrix formation extracellularly, at later stages of osteoblast maturation. The DMP1 gene has been found to be ectopically expressed in lung cancer although the reason for this is unknown.


The actual alignment was detected with superfamily member pfam07263:

Pssm-ID: 462128 [Multi-domain]  Cd Length: 519  Bit Score: 188.21  E-value: 3.92e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104679576   1 NSNFGSDEDSADTTQSREDSTP-------DSTSESRDHDSEDEMNIRPQRDDFTQErSESEENWVGGSSEGDSSHGDGSE 73
Cdd:pfam07263 130 NSRLGSDEDSADTTQSREDSASqgedsaqDTTSESRDLDNEDEVSSRPESGDSTQD-SESEEHWVGGGSEGDSSHGDGSE 208
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104679576  74 FDDEGMQSDDPEGSRSEKSNSRMKSASVKSKESKGNSaEKANTPDSGDSQTAQHPSRKFFRMSRISEEDIRGELDENNTM 153
Cdd:pfam07263 209 FDDEGMQSDDPDSIRSERGNSRMSSASVKSKESKGDS-EQASTQDSGDSQSVEYPSRKFFRKSRISEEDDRGELDDSNTM 287
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104679576 154 EDDKSDSTESTNTEESGLSRSSERSESESQESEENQ-SQEDSNNVQNSSSESSEEVDLPSQEHSSESQEDV-NESRGDNP 231
Cdd:pfam07263 288 EEVKSDSTESTSSKEAGLSQSREDSKSESQEDSEESqSQEDSQNSQDPSSESSQEADLPSQESSSESQEEVvSESRGDNP 367
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1104679576 232 DNTTTQSDQ-EDSDSSEEDSLNKPS*SESESREEQADSESDESLRDSEQSSESTGE-NSSSQEGLQSRSTSA 301
Cdd:pfam07263 368 DNTSSSEEDqEDSDSSEEDSLSTFSSSESESREEQADSESNESLRSSEESPESSEDeNSSSQEGLQSHSAST 439
 
Name Accession Description Interval E-value
DMP1 pfam07263
Dentin matrix protein 1 (DMP1); This family consists of several mammalian dentin matrix ...
1-301 3.92e-55

Dentin matrix protein 1 (DMP1); This family consists of several mammalian dentin matrix protein 1 (DMP1) sequences. The dentin matrix acidic phosphoprotein 1 (DMP1) gene has been mapped to human chromosome 4q21. DMP1 is a bone and teeth specific protein initially identified from mineralized dentin. DMP1 is primarily localized in the nuclear compartment of undifferentiated osteoblasts. In the nucleus, DMP1 acts as a transcriptional component for activation of osteoblast-specific genes like osteocalcin. During the early phase of osteoblast maturation, Ca(2+) surges into the nucleus from the cytoplasm, triggering the phosphorylation of DMP1 by a nuclear isoform of casein kinase II. This phosphorylated DMP1 is then exported out into the extracellular matrix, where it regulates nucleation of hydroxyapatite. DMP1 is a unique molecule that initiates osteoblast differentiation by transcription in the nucleus and orchestrates mineralized matrix formation extracellularly, at later stages of osteoblast maturation. The DMP1 gene has been found to be ectopically expressed in lung cancer although the reason for this is unknown.


Pssm-ID: 462128 [Multi-domain]  Cd Length: 519  Bit Score: 188.21  E-value: 3.92e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104679576   1 NSNFGSDEDSADTTQSREDSTP-------DSTSESRDHDSEDEMNIRPQRDDFTQErSESEENWVGGSSEGDSSHGDGSE 73
Cdd:pfam07263 130 NSRLGSDEDSADTTQSREDSASqgedsaqDTTSESRDLDNEDEVSSRPESGDSTQD-SESEEHWVGGGSEGDSSHGDGSE 208
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104679576  74 FDDEGMQSDDPEGSRSEKSNSRMKSASVKSKESKGNSaEKANTPDSGDSQTAQHPSRKFFRMSRISEEDIRGELDENNTM 153
Cdd:pfam07263 209 FDDEGMQSDDPDSIRSERGNSRMSSASVKSKESKGDS-EQASTQDSGDSQSVEYPSRKFFRKSRISEEDDRGELDDSNTM 287
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104679576 154 EDDKSDSTESTNTEESGLSRSSERSESESQESEENQ-SQEDSNNVQNSSSESSEEVDLPSQEHSSESQEDV-NESRGDNP 231
Cdd:pfam07263 288 EEVKSDSTESTSSKEAGLSQSREDSKSESQEDSEESqSQEDSQNSQDPSSESSQEADLPSQESSSESQEEVvSESRGDNP 367
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1104679576 232 DNTTTQSDQ-EDSDSSEEDSLNKPS*SESESREEQADSESDESLRDSEQSSESTGE-NSSSQEGLQSRSTSA 301
Cdd:pfam07263 368 DNTSSSEEDqEDSDSSEEDSLSTFSSSESESREEQADSESNESLRSSEESPESSEDeNSSSQEGLQSHSAST 439
 
Name Accession Description Interval E-value
DMP1 pfam07263
Dentin matrix protein 1 (DMP1); This family consists of several mammalian dentin matrix ...
1-301 3.92e-55

Dentin matrix protein 1 (DMP1); This family consists of several mammalian dentin matrix protein 1 (DMP1) sequences. The dentin matrix acidic phosphoprotein 1 (DMP1) gene has been mapped to human chromosome 4q21. DMP1 is a bone and teeth specific protein initially identified from mineralized dentin. DMP1 is primarily localized in the nuclear compartment of undifferentiated osteoblasts. In the nucleus, DMP1 acts as a transcriptional component for activation of osteoblast-specific genes like osteocalcin. During the early phase of osteoblast maturation, Ca(2+) surges into the nucleus from the cytoplasm, triggering the phosphorylation of DMP1 by a nuclear isoform of casein kinase II. This phosphorylated DMP1 is then exported out into the extracellular matrix, where it regulates nucleation of hydroxyapatite. DMP1 is a unique molecule that initiates osteoblast differentiation by transcription in the nucleus and orchestrates mineralized matrix formation extracellularly, at later stages of osteoblast maturation. The DMP1 gene has been found to be ectopically expressed in lung cancer although the reason for this is unknown.


Pssm-ID: 462128 [Multi-domain]  Cd Length: 519  Bit Score: 188.21  E-value: 3.92e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104679576   1 NSNFGSDEDSADTTQSREDSTP-------DSTSESRDHDSEDEMNIRPQRDDFTQErSESEENWVGGSSEGDSSHGDGSE 73
Cdd:pfam07263 130 NSRLGSDEDSADTTQSREDSASqgedsaqDTTSESRDLDNEDEVSSRPESGDSTQD-SESEEHWVGGGSEGDSSHGDGSE 208
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104679576  74 FDDEGMQSDDPEGSRSEKSNSRMKSASVKSKESKGNSaEKANTPDSGDSQTAQHPSRKFFRMSRISEEDIRGELDENNTM 153
Cdd:pfam07263 209 FDDEGMQSDDPDSIRSERGNSRMSSASVKSKESKGDS-EQASTQDSGDSQSVEYPSRKFFRKSRISEEDDRGELDDSNTM 287
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104679576 154 EDDKSDSTESTNTEESGLSRSSERSESESQESEENQ-SQEDSNNVQNSSSESSEEVDLPSQEHSSESQEDV-NESRGDNP 231
Cdd:pfam07263 288 EEVKSDSTESTSSKEAGLSQSREDSKSESQEDSEESqSQEDSQNSQDPSSESSQEADLPSQESSSESQEEVvSESRGDNP 367
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1104679576 232 DNTTTQSDQ-EDSDSSEEDSLNKPS*SESESREEQADSESDESLRDSEQSSESTGE-NSSSQEGLQSRSTSA 301
Cdd:pfam07263 368 DNTSSSEEDqEDSDSSEEDSLSTFSSSESESREEQADSESNESLRSSEESPESSEDeNSSSQEGLQSHSAST 439
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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