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Conserved domains on  [gi|1111813255|gb|API68439|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Pteronotus sp. PV-RO-BRA]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009567)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 3.61e-71

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 207.87  E-value: 3.61e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1111813255   1 MNMALTLLINTLLASLLVAIAFWLPQTNVYTEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00106    1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1111813255  81 TGNLKTMLPVALLLISILAISLAYEWFQEGLEWSE 115
Cdd:MTH00106   81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 3.61e-71

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 207.87  E-value: 3.61e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1111813255   1 MNMALTLLINTLLASLLVAIAFWLPQTNVYTEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00106    1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1111813255  81 TGNLKTMLPVALLLISILAISLAYEWFQEGLEWSE 115
Cdd:MTH00106   81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-112 7.86e-30

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 102.50  E-value: 7.86e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1111813255  18 VAIAFWLPQTNVYTEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQTGNLKTM-LPVALLLIS 96
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1111813255  97 ILAISLAYEWFQEGLE 112
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 4-113 5.30e-24

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 88.25  E-value: 5.30e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1111813255   4 ALTLLINTLLASLLVAIAFWLPQTNVYTEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQTGN 83
Cdd:COG0838     9 LIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRE 86

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1111813255  84 LKTM-LPVALLLISILAISLAYEWFQEGLEW 113
Cdd:COG0838    87 LGWFgLIEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 3.61e-71

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 207.87  E-value: 3.61e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1111813255   1 MNMALTLLINTLLASLLVAIAFWLPQTNVYTEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00106    1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1111813255  81 TGNLKTMLPVALLLISILAISLAYEWFQEGLEWSE 115
Cdd:MTH00106   81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-115 9.51e-46

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 143.52  E-value: 9.51e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1111813255   1 MNMALT-LLINTLLASLLVAIAFWLPQTNVYTEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79
Cdd:MTH00136    1 MNLITTiLTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1111813255  80 QTGNLKTMLPVALLLISILAISLAYEWFQEGLEWSE 115
Cdd:MTH00136   81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 3-115 1.05e-44

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 140.90  E-value: 1.05e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1111813255   3 MALTLLINTLLASLLVAIAFWLPQTNVYTEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTG 82
Cdd:MTH00069    2 IMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLN 81

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1111813255  83 NLKTMLPVALLLISILAISLAYEWFQEGLEWSE 115
Cdd:MTH00069   82 TPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-113 5.37e-42

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 133.85  E-value: 5.37e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1111813255   1 MNMALTLLINTLLASLLVAIAFWLPQTNVYTEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00113    1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1111813255  81 TGNLKTMLPVALLLISILAISLAYEWFQEGLEW 113
Cdd:MTH00113   81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEW 113
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-115 3.47e-39

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 127.02  E-value: 3.47e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1111813255   1 MNMALTLLINTLLASLLVAIAFWLPQTNVYTEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00042    2 TNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATL 81

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1111813255  81 TGNLKTMLPVALLLISILAISLAYEWFQEGLEWSE 115
Cdd:MTH00042   82 ITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 3-113 1.60e-34

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 114.99  E-value: 1.60e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1111813255   3 MALTLLINTLLASLLVAIAFWLPQTNVYTEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTG 82
Cdd:MTH00203    4 IMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLS 83

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1111813255  83 NLKTMLpvALLLISILAISLAYEWFQEGLEW 113
Cdd:MTH00203   84 SLSLLL--AFLFLILLTLGLIYEWLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-112 7.86e-30

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 102.50  E-value: 7.86e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1111813255  18 VAIAFWLPQTNVYTEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQTGNLKTM-LPVALLLIS 96
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1111813255  97 ILAISLAYEWFQEGLE 112
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-113 4.86e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 96.00  E-value: 4.86e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1111813255   3 MALTLLINTLLASLLVAIAFWL--PQTNVYTEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00161    1 MILIILLIILLISIILMILASLlsKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1111813255  81 TGNLKTMLPVALLLISILAISLAYEWFQEGLEW 113
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-115 8.58e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 95.31  E-value: 8.58e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1111813255   1 MNMALTLLINTLLASLLVAIAFWLPQTNVY-TEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79
Cdd:MTH00148    2 LSILLSLLFALILSPVLLLLGLVLSKRSYSdREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSL 81

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1111813255  80 QTGNLKTMLPVALLLISILAISLAYEWFQEGLEWSE 115
Cdd:MTH00148   82 GSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-113 4.27e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 91.21  E-value: 4.27e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1111813255   1 MNMALTLLINTLLASLLVAIAFWL--PQTNVYTEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWA 78
Cdd:MTH00202    1 MLLILFMSILSILISSLLFLVSWMlsFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1111813255  79 SQTGNLKTMLPVALLLISILAISLAYEWFQEGLEW 113
Cdd:MTH00202   81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDW 115
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 4-113 5.30e-24

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 88.25  E-value: 5.30e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1111813255   4 ALTLLINTLLASLLVAIAFWLPQTNVYTEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQTGN 83
Cdd:COG0838     9 LIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRE 86

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1111813255  84 LKTM-LPVALLLISILAISLAYEWFQEGLEW 113
Cdd:COG0838    87 LGWFgLIEMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-114 7.93e-23

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 85.68  E-value: 7.93e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1111813255   1 MNMALTLLINTLLASLLVAIAFWL--PQTNVYTEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWA 78
Cdd:MTH00012    1 MSLMMIPMMISLILPPLVLGAAWVlaARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1111813255  79 SQTGNLKTMLPVALLLISILAISLAYEWFQEGLEWS 114
Cdd:MTH00012   81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 1-113 3.68e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 81.29  E-value: 3.68e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1111813255   1 MNMALTLLINTLLASLLVAIAFWLPQTNVYTEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00055    6 LGIFILLLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYN 85

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1111813255  81 TGNLKTMLPVALLLIsILAISLAYEWFQEGLEW 113
Cdd:MTH00055   86 QIGLFGFWVMYLFLI-ILTIGLIYEWVKGGLEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 4-114 1.74e-20

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 79.52  E-value: 1.74e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1111813255   4 ALTLLINTLLASLLVAIAFWLPQTNVYTEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQTGN 83
Cdd:PRK06602   12 LIFLIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFRE 89

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1111813255  84 L-KTMLPVALLLISILAISLAYEWFQEGLEWS 114
Cdd:PRK06602   90 IgWLGFVEAMIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 6-113 8.68e-19

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 75.35  E-value: 8.68e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1111813255   6 TLLINTLLAS----LLVAIAFWLPQTNVY-----TEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLP 76
Cdd:MTH00030    7 TIFFSTLLGVgiilLLVSISFTLGNSRIGltkpdSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWS 86

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1111813255  77 WASQTGNLKTMLPVALLLIsILAISLAYEWFQEGLEW 113
Cdd:MTH00030   87 IVFNQLNLFSFWIVYTFLI-VLAIGLAYEWIKGGLEW 122
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 1-113 1.62e-17

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 71.63  E-value: 1.62e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1111813255   1 MNMALTLLINTLLASLLVAIAFWLPQTNVYTEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQ 80
Cdd:MTH00018    1 YGLFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFL--FPWCVL 78

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1111813255  81 TGNLKTM-LPVALLLISILAISLAYEWFQEGLEW 113
Cdd:MTH00018   79 YNQIAPFgFWTMVGFLFILTLGLIYEWIKGGLEW 112
ndhC CHL00022
NADH dehydrogenase subunit 3
 7-114 1.02e-11

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 56.92  E-value: 1.02e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1111813255   7 LLINTLLASLLVAIAFWLPQTNVYTEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQTGNLKT 86
Cdd:CHL00022   14 LIISSLIPILAFLISGLLAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGV 91

                          90       100
                  ....*....|....*....|....*....
gi 1111813255  87 MLPV-ALLLISILAISLAYEWFQEGLEWS 114
Cdd:CHL00022   92 SAFIeALIFVLILIVGLVYAWRKGALEWS 120
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 33-113 1.38e-10

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 54.29  E-value: 1.38e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1111813255  33 KSSPYECGFDPMGSARLP--FSMKFFLVAITFLLFDLEIALLLPlpWASQTGNLKTMLPVALLL-ISILAISLAYEWFQE 109
Cdd:PRK07928   37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDALGVFGLVEMALfMLTVFVAYAYVWRRG 114


                  ....
gi 1111813255 110 GLEW 113
Cdd:PRK07928  115 GLEW 118
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
1-113 3.06e-09

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 50.51  E-value: 3.06e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1111813255   1 MNMALTLLINTLLASLLVAIAFWLPQTNVYTEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPlpWASQ 80
Cdd:PRK07756   10 MIVLIFLLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVA 87

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1111813255  81 TGNLKTMLPVALLL-ISILAISLAYEWFQEGLEW 113
Cdd:PRK07756   88 YDKLGLFALIEMLIfVVMLLVGLAYAWKKKVLQW 121
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-113 1.14e-06

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 43.73  E-value: 1.14e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1111813255   1 MNMALTLLINTLLASLLVAIAFWLPQTNVYTEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLpwasQ 80
Cdd:MTH00092    2 LVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGL----L 77

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1111813255  81 TGNLKTMLPVALLLISILAiSLAYEWFQEGLEW 113
Cdd:MTH00092   78 VSDFSSLISFFMLMIFIFF-GFYMEWWYGKLIW 109
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
33-113 1.73e-06

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 43.50  E-value: 1.73e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1111813255  33 KSSPYECGFDPMGSARlPFSMKFFLVAITFLLFDLEIALLlpLPWASQTGNLKTMLPVALLL-ISILAISLAYEWFQEGL 111
Cdd:PRK08489   47 KLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWAVDFKLLGLFGLIEMLLfIVLLTIGFIYAWKKGAL 123


                  ..
gi 1111813255 112 EW 113
Cdd:PRK08489  124 EW 125
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 35-76 1.38e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 38.34  E-value: 1.38e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1111813255  35 SPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLP 76
Cdd:MTH00060   39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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