|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.59e-164 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 461.98 E-value: 2.59e-164
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 1 MTPQAKLIFTTSLLLGTTITISSNHWIMAWAGLEINTLAILPMISKSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWH 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 81 TGQWDITQLTHPTASLILTSAIAMKLGLAPFHFWFPEVLQGSPLTTGLLLSTVMKLPPITLLFMTSPSLNPTLLTCMAVL 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 161 STALGGWMGLNQTQIRKILAFSSISHLGWMAIIIAYNPKLTLLNFYLYTLMTTAVFLTFNTIKTPNLSTLMTTWTKIPSL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 241 NAMLFLTLLSLAGLPPLTGFLPKWLIIQELTKQDMIPAATAISLLSLLGLFFYLRLAYCATITLPPHTTNHMKQWHINKP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 1356686918 321 TSTTIAILMVLSTMLLPISPMITTII 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
4.55e-137 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 393.02 E-value: 4.55e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 1 MTPQAKLIFTTSLLLGTTITISSNHWIMAWAGLEINTLAILPMISKSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWH 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 81 TGQWDITQLTHPTASLILTSAIAMKLGLAPFHFWFPEVLQGSPLTTGLLLSTVMKLPPITLLFMTSPSlNPTLLTCMAVL 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 161 STALGGWMGLNQTQIRKILAFSSISHLGWMAIIIAYNPKLTLLNFYLYTLMTTAVFLTFNTIKTPNLSTLMTTWTKIPSL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 241 NAMLFLTLLSLAGLPPLTGFLPKWLIIQELTKQDMIPAATAISLLSLLGLFFYLRLAYCATITLPPHTTNHMKQWHINKP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*..
gi 1356686918 321 TSTT-IAILMVLSTMLLPISPMITTII 346
Cdd:MTH00135 320 QLTLpLAISTTATLMLLPLTPAILALL 346
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
9.24e-135 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 387.35 E-value: 9.24e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 1 MTPQAKLIFTTSLLLGTTITISSNHWIMAWAGLEINTLAILPMISKSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWH 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 81 TGQWDITQLTHPTASLILTSAIAMKLGLAPFHFWFPEVLQGSPLTTGLLLSTVMKLPPITLLFMTSPSLNPTLLTCMAVL 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 161 STALGGWMGLNQTQIRKILAFSSISHLGWMAIIIAYNPKLTLLNFYLYTLMTTAVFLTFNTIKTPNLSTLMTTWTKIPSL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 241 NAMLFLTLLSLAGLPPLTGFLPKWLIIQELTKQDMIPAATAISLLSLLGLFFYLRLAYCATITLPPHTTNHMKQWHINKP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*.
gi 1356686918 321 TSTTIAILMVLSTMLLPISPMITTII 346
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNLF 346
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
4.95e-122 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 354.92 E-value: 4.95e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 1 MTPQAKLIFTTSLLLGTTITISSNHWIMAWAGLEINTLAILPMISKSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWH 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 81 TGQWDITQLTHPTASLILTSAIAMKLGLAPFHFWFPEVLQGSPLTTGLLLSTVMKLPPITLLFMTSPSLNPTLLTCMAVL 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 161 STALGGWMGLNQTQIRKILAFSSISHLGWMAIIIAYNPKLTLLNFYLYTLMTTAVFLTFNTIKTPNLSTLMTTWTKIPSL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 241 NAMLFLTLLSLAGLPPLTGFLPKWLIIQELTKQDMIPAATAISLLSLLGLFFYLRLAYCATITLPPhTTNHMK-QWHINK 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFP-STNNMKmKWQFEN 319
|
330 340
....*....|....*....|....*..
gi 1356686918 320 PTSTT-IAILMVLSTMLLPISPMITTI 345
Cdd:MTH00105 320 TKPMTlLPTLIILSTMLLPLTPMLSIL 346
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.66e-98 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 294.95 E-value: 1.66e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 1 MTPQAKLIFTTSLLLGTTITISSNHWIMAWAGLEINTLAILPMISKSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWH 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 81 TGQWDITQLTHPTASLILTSAIAMKLGLAPFHFWFPEVLQGSPLTTGLLLSTVMKLPPITLLFMTSPSLNPTLLTCMAVL 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 161 STALGGWMGLNQTQIRKILAFSSISHLGWMAIIIAYNPKLTLLNFYLYTLMTTAVFLTFNTIKTPNLSTLMTTWTKIPSL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 241 NAMLFLTLLSLAGLPPLTGFLPKWLIIQELTKQDMIPAATAISLLSLLGLFFYLRLAYCATITLPPHTTNHMKQWHINKP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 1356686918 321 TSTTIAILMVLSTMLLPISPMITTII 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
7-336 |
3.76e-84 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 258.32 E-value: 3.76e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 7 LIFTTSLLLGTTITISSNHWIMAWAGLEINTLAILPMISKSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWHTGQWDI 86
Cdd:MTH00041 7 IFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 87 TQLTHPTASLILTSAIAMKLGLAPFHFWFPEVLQGSPLTTGLLLSTVMKLPPITLLFMTSPSLNPTLLTCMAVLSTALGG 166
Cdd:MTH00041 87 NGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 167 WMGLNQTQIRKILAFSSISHLGWMAIIIAYNPKLTLLNFYLYTLMTTAVFLTFNTIKTPNLSTLMTTWTKIPSLNAMLFL 246
Cdd:MTH00041 167 WGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFIL 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 247 TLLSLAGLPPLTGFLPKWLIIQELTKQDMIPAATAISLLSLLGLFFYLRLAYCATITLPPHTTNHMKQWHINKPTSTTIA 326
Cdd:MTH00041 247 SILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNITVYGV 326
|
330
....*....|
gi 1356686918 327 ILMVLSTMLL 336
Cdd:MTH00041 327 ILSILSSISI 336
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
5.70e-61 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 198.51 E-value: 5.70e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 1 MTPQAKLIFTTSLLLGTTITISSNHWIMAWAGLEINTLAILPMISKSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWh 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 81 tgqwdITQLTHPTASLILTSAIAMKLGLAPFHFWFPEVLQGSPLTTGLLLSTVMKLPPITLLFMTspsLNPTLLTCMAVL 160
Cdd:MTH00160 81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 161 STALGGWMGLNQTQIRKILAFSSISHLGWMAIIIAYNPKLTLLNFYLYTLMTTAVFLTFNTIKTPNLSTLMTTWTKIPSL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 241 NAMLFLTLLSLAGLPPLTGFLPKWLIIQELTKQDMIPAATAISLLSLLGLFFYLRLAYCATITLPPHTTNHMKQwhINKP 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKK--KKNK 310
|
330 340
....*....|....*....|....*
gi 1356686918 321 TSTTIAILMVLSTMLLPISPMITTI 345
Cdd:MTH00160 311 FSLILNFLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
5-276 |
6.55e-51 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 171.99 E-value: 6.55e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 5 AKLIFTTSLLLGTTITISSNHWIMAWAGLEINTLAILPMISKSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWHTGQW 84
Cdd:MTH00144 5 SNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 85 DItqlthptaSLILTSAIAMKLGLAPFHFWFPEVLQGSPLTTGLLLSTVMKLPPITLLFMTSPSLNPTLLTC-MAVLSTA 163
Cdd:MTH00144 85 FS--------MSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLCvISVLSAL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 164 LGGWMGLNQTQIRKILAFSSISHLGWMAIIIAYNPKLTLLNFYLYTLMTTAVFLTFNTIKTPNLSTLmtTWTKIPSLNAM 243
Cdd:MTH00144 157 VGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDL--GSLKPSYKTGL 234
|
250 260 270
....*....|....*....|....*....|....
gi 1356686918 244 LFLT-LLSLAGLPPLTGFLPKWLIIQELTKQDMI 276
Cdd:MTH00144 235 SIISlLLSLGGLPPFLGFCSKLLVLISSMESSPL 268
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
7-276 |
7.38e-49 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 166.88 E-value: 7.38e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 7 LIFTTSLLLGTTITISSNHWIMAWAGLEINTLAILPMISKSHHPRSVEAATKYFLTQAAASALVLFSSmtnawhTGQWDI 86
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 87 TQLTHPTASLILTSAIAMKLGLAPFHFWFPEVLQGSPLTTGLLLSTVMKLPPITLLFMTSPSLNPTLLTCMAVLSTALGG 166
Cdd:MTH00011 83 PSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 167 WMGLNQTQIRKILAFSSISHLGWMAIIIAYNPKLTLLNFYLYTLMTTAVFLTFNTIKTPNLSTLMTTWTKIPSLNAMLFL 246
Cdd:MTH00011 163 LGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFI 242
|
250 260 270
....*....|....*....|....*....|
gi 1356686918 247 TLLSLAGLPPLTGFLPKWLIIQELTKQDMI 276
Cdd:MTH00011 243 MLLSLGGLPPFTGFMPKLMAIETLTSNSMI 272
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
8-270 |
9.57e-40 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 142.89 E-value: 9.57e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 8 IFTTSLLLGTTITISSNHWIMAWAGLEINTLAILPMISKSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWHTgqwdit 87
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL------ 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 88 qLTHPTASLILTSAIAMKLGLAPFHFWFPEVLQGSPLTTGLLLSTVMKLPPITLLfmTSPSLNPTLLTCMAVLSTALGGW 167
Cdd:MTH00197 76 -YLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLIL--AFNSSSFMGLLICSVLSSLIGGI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 168 MGLNQTQIRKILAFSSISHLGWMAIIIAYNPKLTLLNFYLYTLMTTAVFLTFNTIKTPNLSTlMTTWTKIPSLNAMLF-L 246
Cdd:MTH00197 153 GGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQ-QYSNPESMSSNLVFLgL 231
|
250 260
....*....|....*....|....
gi 1356686918 247 TLLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:MTH00197 232 SFLSLGGLPPLSGFFLKWLILTSL 255
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-276 |
6.20e-34 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 130.24 E-value: 6.20e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 14 LLGTTITISSNHWIMAWAGLEINTLAILPMIS-KSHHPRSVEAATKYFLTQAAASALVLF-SSMTNAWhTGQWDITQL-- 89
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYGA-TGSLNLAGIaa 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 90 ---THPTASLILTSAIAM-------KLGLAPFHFWFPEVLQGSPLTTGLLLSTVMKL----PPITLLFMTSPSLNP---T 152
Cdd:COG1007 191 alaAGGANSPLLLLGLVLvlaglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaALLRLLVEAFPGLAAdwqL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 153 LLTCMAVLSTALGGWMGLNQTQIRKILAFSSISHLGWMAI-IIAYNPK-LTLLNFYL--YTLMTTAVFLTFNTIKTP--- 225
Cdd:COG1007 271 LLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLgLAAGTPLgVSAALFYLlaYLFMNLGAFAVILLLSRKgge 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1356686918 226 --NLSTLMTTWTKIPSLNAMLFLTLLSLAGLPPLTGFLPKWLIIQELTKQDMI 276
Cdd:COG1007 351 aeEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLY 403
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-267 |
5.01e-32 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 123.22 E-value: 5.01e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 13 LLLGTTITISSNHWIMAWAGLEINTLAILPMI-SKSHHPRSVEAATKYFLTQAAASALVLFS-------------SMTNA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 79 WHTGQWDITQLTHPTASLILTSAIAMKLGLAPFHFWFPEVLQGSPLTTGLLLSTVMKLPPITLLFMTSPSLNptLLTCMA 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVN--ILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 159 VLSTALGGWMGLNQTQIRKILAFSSISHLGWMAIIIAYNP----KLTLLNFYLYTLMTTAVF---LTFNTIKTPnLSTLM 231
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFsiiLALNVYKNL-IIEFS 238
|
250 260 270
....*....|....*....|....*....|....*.
gi 1356686918 232 TTWTKIPSLNAMLFLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00196 239 GLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLIL 274
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-281 |
3.75e-29 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 113.56 E-value: 3.75e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 23 SNHWIMAWAGLEINTLAILPMI-SKSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWHTGQWDITQL-----------T 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 91 HPTASLILTSAIAMKLGLAPFHFWFPEVLQGSPLTTGLLLSTVMKLPPITLLFMTSPSLNPT------LLTCMAVLSTAL 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSspfiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 165 GGWMGLNQTQIRKILAFSSISHLGWMAIIIA----YNPKLTLLNFYLYTLMTTAVFLTFNTI-----KTPNLSTLMTTWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGagtiYGIQAAIFHLLTHGLFSAGLFLCAGSViyrrvHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1356686918 236 KIPSLNAMLFLTLLSLAGLPPLTGFLPKWLIIQELTKQDMIPAATA 281
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLA 286
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-267 |
3.86e-28 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 113.96 E-value: 3.86e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 13 LLLGTTITISSNHWIMAWAGLEINTLAILPMIS-KSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWHTGQWDI----T 87
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 88 QLTHPTASLILTSAIAMKLGLAPFHFWFPEVLQGSPLTTGLLLSTVMKLPPITLLFMTSPSLNpTLLTCmAVLSTALGGW 167
Cdd:MTH00199 186 ILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTN-VVLIC-AVLSIIYGAI 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 168 MGLNQTQIRKILAFSSISHLGWMAIIIAYNP----KLTLLNFYLYTLMTTAVFLTFNTIK--TPNLSTLMTTWTKIPSLN 241
Cdd:MTH00199 264 GALNQTKIKRLLAYSGIGHMGFILFGVAIGSfesiQASLIYMIIYVIMSICSFSIILSLKltKGLIVEVSGLSRKNPVIA 343
|
250 260
....*....|....*....|....*.
gi 1356686918 242 AMLFLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00199 344 LTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-279 |
6.42e-28 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 113.38 E-value: 6.42e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 14 LLGTTITISSNHWIMAWAGLEINTLA--ILPMISKsHHPRSVEAATKYFLTQAAASALVLFSSMTNAWHTGQWDITQLTH 91
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPlyALAALRR-DRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAK 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 92 PTAS------------LILTSAIAMKLGLAPFHFWFPEVLQGSPLTTGLLLSTVMKL----PPITLLFMTSPSLNPT--- 152
Cdd:PRK05777 192 ALADgsgnsllllfglVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaVLLRLLVVAFGGLSEDwqq 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 153 LLTCMAVLSTALGGWMGLNQTQIRKILAFSSISHLGWMAIIIAYNPKLTL--LNFYL--YTLMTTAVFLTFNTIKTPNL- 227
Cdd:PRK05777 272 VLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYLlaYLFMTLGAFGVISLLRRKGGe 351
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1356686918 228 STLMTTWTKI----PSLNAMLFLTLLSLAGLPPLTGFLPKWLIIQELTKQDMIPAA 279
Cdd:PRK05777 352 AESISDFAGLskrsPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLA 407
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-276 |
4.19e-26 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 108.11 E-value: 4.19e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 14 LLGTTITISSNHWIMAWAGLEINTLAILPMIS-KSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWHTGQWDITQLTH- 91
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLf 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 92 -----PTASLILT------SAIAMKLGLAPFHFWFPEVLQGSPLTTGLLLSTVMKLP---PITLLFMT-----SPSLNPT 152
Cdd:TIGR01770 192 lsngmLNISLLLLgivlilVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAifaVFLRLFLYilfgfSEAWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 153 LLTCmAVLSTALGGWMGLNQTQIRKILAFSSISHLGWMAIIIAYNPKLTLLN--FYL--YTLMTTAVF----LTFNTIKT 224
Cdd:TIGR01770 272 LAII-AFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAvlFYIfiYALMSLGAFgvlsLLRSYKDE 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1356686918 225 PN--LSTLMTTWTKIPSLNAMLFLTLLSLAGLPPLTGFLPKWLIIQELTKQDMI 276
Cdd:TIGR01770 351 WIeyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLY 404
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-282 |
3.10e-22 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 96.75 E-value: 3.10e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 13 LLLGTTITISSNHWIMAWAGLEINTLAILPMISKSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWHTGQWDITQLTH- 91
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAr 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 92 ---------PTASLILTSAIAMKLGLAPFHFWFPEVLQGSPLTTGLLLSTVM-KLPP------ITLLFMTSPSLNP-TLL 154
Cdd:COG0651 196 laeldpgllLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLtKVGVyailrvLTLLFGADPALFLgTLL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 155 TCMAVLSTALGGWMGLNQTQIRKILAFSSISHLGWMAIIIAYNPKLTLLNFYLY----TLMTTAVFLTFNTI----KTPN 226
Cdd:COG0651 276 LVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHllnhALAKALLFLAAGAIeratGTRD 355
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1356686918 227 LSTLMTTWTKIPSLNAMLFLTLLSLAGLPPLTGFLPKWLIIQELTKQDMIPAATAI 282
Cdd:COG0651 356 LDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVL 411
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-267 |
8.50e-19 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 87.22 E-value: 8.50e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 15 LGTTITISSNHWIMAWAGLEINTLAILPMISKSHHPRSV---------EAATKYFLTQAAASALVLFSSMTNAWHTGQ-- 83
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNeg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 84 --WDITQLTHPTAS----------LILTSAIAMKLGLAPFHFWFPEVLQGSPLTTGLLLSTVMKLPPITLLfmTSPSLNP 151
Cdd:MTH00198 279 mlGTILSATLETTNielrqgslgyLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILL--TSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 152 TLLTCMAVLSTALGGWMGLNQTQIRKILAFSSISHLGWMAIIIAYNPKLTLLNFYLYTLM-TTAVFLTFNTIKT------ 224
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTyLVSALASFTVICTleefgt 436
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1356686918 225 ------------------PNLSTLMTTWTKIPSLNAMLFLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00198 437 rtptsrqrdgsfgnynlvRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFIL 497
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-263 |
3.68e-18 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 85.06 E-value: 3.68e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 51 RSVEAATKYFLTQAAASALVL--FSSM--TNAWHTGQWDI------TQLTHPTASLI----LTSAIAMKLGLAPFHFWFP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVygFSWLygLSGGEIELQEIvnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 117 EVLQGSPL-----------TTGLLLSTVMklppITLLFMTSPSLNPTLLTCMAVLSTALGGWMGLNQTQIRKILAFSSIS 185
Cdd:CHL00049 239 DVYEGSPTpvvaflsvtskVAASALATRI----FDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIG 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 186 HLGWMAI-IIAYNPK------LTLLNFYLY-TLMTTAVFLTFNT-IKTPNLSTLMTTWTKIPSLNAMLFLTLLSLAGLPP 256
Cdd:CHL00049 315 QIGYVIIgIIVGDSNdgyasmITYMLFYIFmNLGTFACIVLFGLrTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPP 394
|
....*..
gi 1356686918 257 LTGFLPK 263
Cdd:CHL00049 395 LAGFFGK 401
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
1.35e-16 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 80.48 E-value: 1.35e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 50 PRSVEAATKYFLTQAAASALVLF-SSMTNAWHTGQwdiTQLTHPTASLI-------------LTSAIAMKLGLAPFHFWF 115
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGS---TQLSAIALALItspslglalalvfVIAGIAFKISAVPFHQWT 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 116 PEVLQGSPLTTGLLLSTVMKLP----PITLLFMTSPSLNP---TLLTCMAVLSTALGGWMGLNQTQIRKILAFSSISHLG 188
Cdd:PRK02504 234 PDVYEGSPTPVVAFLSVGSKAAgfalAIRLLVTAFPSFDEqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAG 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 189 WMAI--IIAYNPKLTLLNFYL--YTLMTTAVF--LTFNTIKT--PNLSTLMTTWTKIPSLNAMLFLTLLSLAGLPPLTGF 260
Cdd:PRK02504 314 FVMIglVAGTEAGYASMVFYLlaYLFMNLGAFacVILFSLRTgtDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGF 393
|
...
gi 1356686918 261 LPK 263
Cdd:PRK02504 394 FGK 396
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-282 |
1.65e-12 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 68.18 E-value: 1.65e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 38 LAILPM---ISKSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWHTGQW--DITQLTHPTASLILTSAI--------AM 104
Cdd:COG1008 142 LMLIPMyflIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAAPLPLTAQLLLflaffiafAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 105 KLGLAPFHFWFPEVLQGSPLTTGLLLSTVM-KLP-------PITLLFMTSPSLNPTLLTcMAVLSTALGGWMGLNQTQIR 176
Cdd:COG1008 222 KVPMFPFHTWLPDAHVEAPTAGSVLLAGVLlKMGgygllrfALPLFPEASAYFAPLLAA-LGVIGIIYGALVALAQTDLK 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 177 KILAFSSISHLGWMAI-IIAYNPK------LTLLNFylyTLMTTAVFL----TFNTIKTPNLSTLMTTWTKIPSLNAMLF 245
Cdd:COG1008 301 RLIAYSSVSHMGFVLLgIFALNPLglqgavLQMVSH---GLITAALFLlvgvLYDRTHTRDIADLGGLAKRMPVLAALFL 377
|
250 260 270
....*....|....*....|....*....|....*..
gi 1356686918 246 LTLLSLAGLPPLTGFLPKWLIIQELTKQDMIPAATAI 282
Cdd:COG1008 378 LAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAA 414
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
34-282 |
7.72e-12 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 66.17 E-value: 7.72e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 34 EINTLAILPMISKSHHpRSVEAATKYFLTQAAASALVLFSSMTNAWHTGQWDIT-------QLTHPTASLI----LTSAI 102
Cdd:PRK08668 128 EIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFAdisqgliNDTSTGFALIvflfLLAFG 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 103 AMKLGLAPFHFWFPEVLQGSPLTTGLLLS------------TVMKLPPITLLF------MTSPSLNpTLLTCMAVLSTAL 164
Cdd:PRK08668 207 VAKAGIFPLHVWAPDAYSEAPQSFSAVLSgqlsklgaygflLVLYVLPGTKLFsefgtyRGVPLFN-YILAWLGNISIIV 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 165 GGWMGLNQTQIRKILAFSSISHLGWMAIIIAYNPKLT----LLNFYLYTLMTTAVFLTFNTI----KTPNLSTLMTTWTK 236
Cdd:PRK08668 286 GTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGfaggLFHVFNHALFKGLFFLIFAAViyrtGTTKISEMGGLIEK 365
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1356686918 237 IPSLNAMLFLTLLSLAGLPPLTGFLPKWLIIQELTKQDMIPAATAI 282
Cdd:PRK08668 366 MPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMA 411
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
1.72e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 65.12 E-value: 1.72e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 33 LEINTLAILPMIS-KSHHPRSVEAATKYFLTQAAASALVLFSSmtnAWHTGQWDI-------------TQLTHPTASLIL 98
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGI---ALLYGQYGTlnmaylavkmsenPTVVAKIALALF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 99 TSAIAMKLGLAPFHFWFPEVLQGSP--LTTGLLLSTVMKLPPITLLFMT--SPSLNPT----LLTCMAVLSTALGGWMGL 170
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYPAAPssISAMLLVIKQAGLYALARVLFSiyGPAINLAtvgwVIIILGCLTMFVGVAMAV 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 171 NQTQIRKILAFSSISHLGWMAI-----IIAYNPklTLLNFYLYTLMTTAVFLTFN-----------------TIKTPNLS 228
Cdd:PRK08376 307 VQKDVKRLLAYHSVSQIGYMLLglgvgLAALGD--PAMASYGEIALAGGIYHIVNhalykallfltagaviyETGTRNLN 384
|
250 260 270
....*....|....*....|....*....|....*...
gi 1356686918 229 TLMTTWTKIPSLNAMLFLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 385 ELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-282 |
2.39e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 61.43 E-value: 2.39e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 33 LEINTLAILPMISKSHHPRSVEAATKYFLTQAAASALVLFS-SMTNAwHTGQWDITQL--------THPTASLILTSAIA 103
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGvGLLYG-VTGTLNMADLagalaenpTVVTAFGFVLLALA 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 104 MKLGLAPFHFWFPEVLQG-SPLTTGLLLSTVMKLPP----------ITLLFMTSPSLNpTLLTCMAVLSTALGGWMGLNQ 172
Cdd:PRK08375 214 LKAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAVyaliriyftvFGGDFRFALGLG-WLLAVLALLSMLVGSLAALGQ 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 173 TQIRKILAFSSISHLGWMAIIIAYNPKLTLLN--FYL--YTLMTTAVFLT----FNTIKTPNLSTLMTTWTKIPSLNAML 244
Cdd:PRK08375 293 DDVKRVLAYSTVSQMGYILLGLALLTPLALAAglLHLlhHALMKGALFLAagaiEVTYGTRRLSELSGLGRRMPLTAAAF 372
|
250 260 270
....*....|....*....|....*....|....*...
gi 1356686918 245 FLTLLSLAGLPPLTGFLPKWLIIQELTKQDMIPAATAI 282
Cdd:PRK08375 373 AVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVL 410
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-268 |
3.07e-09 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 58.03 E-value: 3.07e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 50 PRSVEAATKYFLTQAAASALVLFSSMTNAW-HTGQWDITQLT----HPTASLILTSAI----AMKLGLAPFHFWFPEVLQ 120
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFlGGGTFDLLELLnlplPFGVQTWLFLAFfiafAVKVPLFPLHTWLPDAHV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 121 GSPLTTGLLLS-TVMKLPPITLLFMTSPsLNP-------TLLTCMAVLSTALGGWMGLNQTQIRKILAFSSISHLGWMAI 192
Cdd:TIGR01972 232 EAPTAGSVILAgVLLKMGTYGFLRFNLP-LFPdaslyfaPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 193 IIAYNPKLTLLNFYLYT----LMTTAVFL----TFNTIKTPNLSTLMTTWTKIPSLNAMLFLTLLSLAGLPPLTGFLPKW 264
Cdd:TIGR01972 311 GIFSFNELGISGAVFQMishgLITAALFLlvgvLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEF 390
|
....
gi 1356686918 265 LIIQ 268
Cdd:TIGR01972 391 LILL 394
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
92-268 |
5.01e-09 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 57.27 E-value: 5.01e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 92 PTASLILTSAIAMKLGLAPFhFWFPEVLQGSPLTTGLLLSTVMKLPPI-------TLLFMTSPSLNPTLLTCMAVLSTAL 164
Cdd:PRK12663 207 TTIALLFLLAFGMKAALFPF-MWLPAAYHTPNTEVAALFAALLTKVGIyalirvfTLLFPQERELLHPLLATMAAITMVI 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 165 GGWMGLNQTQIRKILAFSSISHLGWMAIIIAYNPKLTLLN--FYLYTLMT--TAVFLTFNTIK----TPNLSTLMTTWTK 236
Cdd:PRK12663 286 GALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGaiFYLVHDMVvkTALFLIAGSLVrltgYRSLQYLGGLYRK 365
|
170 180 190
....*....|....*....|....*....|..
gi 1356686918 237 IPSLNAMLFLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK12663 366 EPLFGALFLILIFAIGGLPPFSGFWGKVLLVQ 397
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
96-263 |
5.35e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 57.63 E-value: 5.35e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 96 LILTSAIAmKLGLAPFHFWFPEVLQGSPLTTGLLLSTVMKLPPITLL------FMTSPSLNPTLLTcMAVLSTALGGWMG 169
Cdd:PRK12644 208 LILVGALS-KSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVarlapgFADVPVWRPTVLV-LGLATMLLGGWRA 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 170 LNQTQIRKILAFSSISHLGWMAIIIAYNPK------LTLLnfYLYTLMTTAVFLTFNTIK----TPNLSTLMTTWTKIPS 239
Cdd:PRK12644 286 LRQHDLKLILAYGTVSQLGFLTVLVGIGTRdaalagLAML--LAHALFKAALFLVVGIIDhstgTRDIRKLSGLGRRQPV 363
|
170 180
....*....|....*....|....
gi 1356686918 240 LNAMLFLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 364 LAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-267 |
6.11e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 57.05 E-value: 6.11e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 96 LILTSAIAMKLGLAPFHFWFPEVLQGSPLTTGLLLSTVMKLPPITL------------LFMTSPSLNpTLLTCMAVLSTA 163
Cdd:PRK12662 213 LFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLiirivydvfkanFVFTTLPFN-NVFMILAALAIV 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 164 LGGWMGLNQTQIRKILAFSSISHLGWMAIIIAYNPKLTLLNFYLY----TLMTTAVFLT-------FNTIKTPNLSTLmt 232
Cdd:PRK12662 292 FGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVsgsisyhFGTTKLEDCLNL-- 369
|
170 180 190
....*....|....*....|....*....|....*
gi 1356686918 233 tWTKIPSLNAMLFLTLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK12662 370 -WKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-270 |
3.83e-08 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 54.77 E-value: 3.83e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 48 HHPRSVEAATKYFLTQAAASALVLFSSMTNAWHTGQWDITQL-----THPTASLILTSAIAM------KLGLAPFHFWFP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELlaaapTILSSPLLTLILLLLllgafgKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 117 EVLQG-SPLTTgLLLSTVMKLPPITLLFMTSP--SLNPTLLTCMAV--LSTAL-GGWMGLNQTQIRKILAFSSISHLGWM 190
Cdd:COG1009 236 DAMEGpTPVSA-LLHAATMVKAGVYLLARLSPlfALSPVWLTVVAIigAITALfAALIALAQTDIKRVLAYSTVSQLGYM 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 191 AIIIAynpkLTLLNFYLYTLMTTAVF------------LTFNTIKTPNLSTLmttWTKIPSLNAMLFLTLLSLAGLPPLT 258
Cdd:COG1009 315 FLALG----VGAYVAALFHLLTHAFFkallflgagsviHATGTRDIRKMGGL---RKKMPITAITFLIGALSLAGIPPFA 387
|
250
....*....|..
gi 1356686918 259 GFLPKWLIIQEL 270
Cdd:COG1009 388 GFFSKEAILEAA 399
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-268 |
4.34e-08 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 54.27 E-value: 4.34e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 34 EINTLAILPMISKSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWHTGQWDITQ-----LTHPTASLILTSAIAMKLGL 108
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSPVIYGGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 109 A------PFHFWFPEVLQGSPLTTGLLLSTVMKLPPITL------LFMTSPSLNP--TLLTCMAVLSTALGGWMGLNQTQ 174
Cdd:PRK06277 210 LygsglpPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALmlvifkLFGGLSYFPSaqGVLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 175 IRKILAFSSISHLGWMAIIIAYNPKLTL-------LNFYLYTlmtTAVFLTFNTI----KTPNLSTLMTTWTKIPSLNAM 243
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGIvagifhaINHVIYK---SALFLGAGIVsyrtKTSNLRKLGGLLPVMPVVAFM 366
|
250 260
....*....|....*....|....*
gi 1356686918 244 LFLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK06277 367 VLCAKLAISGVPPFNGFQSKLMLAQ 391
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
110-266 |
5.41e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 54.54 E-value: 5.41e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 110 PFHFWFPEVLQGSPLTTGLLLSTVMKLPPITLLFMTSPSLNPT-----LLTCMAVLSTALGGWMGLNQTQIRKILAFSSI 184
Cdd:PRK12647 213 PFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTplwqtILPLFGGLTMLTGALLAVRQTDLKLILAYSTV 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 185 SHLGWMAIIIAYNPKLTLLNFYLY----TLMTTAVFLTFNTIK----TPNLSTLMTTWTKIPSLNAMLFLTLLSLAGLPP 256
Cdd:PRK12647 293 SALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAGIIDhetgTRDITKLGGLRRAMPITAAAALLAALSMAGLPP 372
|
170
....*....|
gi 1356686918 257 LTGFLPKWLI 266
Cdd:PRK12647 373 LFGFLAKELI 382
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
98-263 |
5.64e-08 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 54.66 E-value: 5.64e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 98 LTSAIAMKLGLA--------PFHFWFPEVLQG-SPLTTGLLLSTVMKlPPITLLFMTSPSL--NPT---LLTCMAVLSTA 163
Cdd:PRK12650 206 LTTVVAVLIAVAaftksaqfPFHFWLPEAMAAiTPVSAFLHAAAVVK-AGIYLLLRFSPVFhdVAVwnwLLIIVGMITAL 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 164 LGGWMGLNQTQIRKILAFSSISHLGWMAIIIAYNPKLTLLNFYLYT----LMTTAVFLTFNTIK----TPNLSTLMTTWT 235
Cdd:PRK12650 285 MGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTlahaLFKSSLFMLIGVVDhqagTRDIRRLGSLWR 364
|
170 180
....*....|....*....|....*...
gi 1356686918 236 KIPSLNAMLFLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12650 365 RMPFTFVSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
8-279 |
8.08e-08 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 53.78 E-value: 8.08e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 8 IFTTSLLLgttiTISSNHWIMAWAGLEINTLAILPMISKSHHPRSVEAATKYFLTQAAASALVLFSS----------MTN 77
Cdd:PRK06458 116 LFLFTMLL----ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTilvyanaatvMGD 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 78 AWHTGQW-DITQLTHPTASLILTSAIAM-------KLGLAPFHFWFPEVLQGSPLTTGLLLSTVMkLPPITLLFMTS--- 146
Cdd:PRK06458 192 GEMAILWtELLKHASLLDPTLMKLAFVFlligfgtKVGLFPMHAWLPDAHSEAPSPVSALLSGVL-LNVALYAVLRYyil 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 147 ------PSLNPTLLTCMAVLSTALGGWMGLNQTQIRKILAFSSISHLGWMAIIIAYNPKLTLLNFYLYTLM----TTAVF 216
Cdd:PRK06458 271 idaaigSDFPGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNhsltKSAIF 350
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1356686918 217 LTFNTI----KTPNLSTLMTTWTKIPSLNAMLFLTLLSLAGLPPLTGFLPKWLIIQELTKQDMIPAA 279
Cdd:PRK06458 351 FASGNVlqkyGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIA 417
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-268 |
8.86e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 53.41 E-value: 8.86e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 103 AMKLGLAPFHFWFPEVLQGSP---------LTTGLLLSTVMKLppITLLFMTSPSLNPTLLTCMAVLSTALGGWMGLNQT 173
Cdd:PRK07691 220 ATKAGLFPLYFWLPGSYYAPPiaiaalfgaLLTKVGVYAIART--FTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYF 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 174 QIRKILAFSSISHLGWMAIIIAYNPKLTLLNFYLYT----LMTTAVFL----TFNTIKTPNL---STLMTTWtkiPSLNA 242
Cdd:PRK07691 298 DIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLihdmIVKAALFLligiMIKITGTTDLkkmGGLIKRY---PVLGW 374
|
170 180
....*....|....*....|....*.
gi 1356686918 243 MLFLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK07691 375 MFFIAALSLAGIPPLSGFYGKFFIVE 400
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
105-268 |
1.25e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 49.96 E-value: 1.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 105 KLGLapfHFWFPEVLQGSPLTTGLLLSTVMKLPPITLLFMTSP-----SLNPTLLTCMAVLSTALGGWMGLNQTQIRKIL 179
Cdd:MTH00032 241 QLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPlfekaPLTLLIITIFGALTAFFAATVGLVQNDLKKVI 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 180 AFSSISHLGWMAIIIAY--NPKLTLLNFYLYTLMTTAVFLTFN------TIKTPNLSTLMTTWTKIPSLNAMLFLTLLSL 251
Cdd:MTH00032 318 AYSTCSQLGYMVLIIGIegSHNVGLFHLVNHAFFKALLFLSAGsvihstTVDEQDMRKMGGLIHSIPFTYTMMLIGSFSI 397
|
170
....*....|....*..
gi 1356686918 252 AGLPPLTGFLPKWLIIQ 268
Cdd:MTH00032 398 MGLPYLTGFYSKDLILE 414
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
110-277 |
1.67e-06 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 49.75 E-value: 1.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 110 PFHFWFPEVLQGSPLTTGLLLSTVMKLPPITLLFMTSPSLNPT-----LLTCMAVLSTALGGWMGLNQTQIRKILAFSSI 184
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSnmyiyIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 185 SHLGW-MAII-----IAYNPKLTLLNFY-------LYTLMTTAVF---------LTFNTIKTPNLSTLMTTWTKIPSLNA 242
Cdd:PRK12646 308 SQLGMiMAMVgigggYAQHQQDAIASIYvfvlfaaLFHLMNHAIFkcalfmgvgIIDHEAGTRDIRILSGMRQLFPKMNL 387
|
170 180 190
....*....|....*....|....*....|....*
gi 1356686918 243 MLFLTLLSLAGLPPLTGFLPKWLIIQELTKQDMIP 277
Cdd:PRK12646 388 VMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQLS 422
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
1.80e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 49.83 E-value: 1.80e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 48 HHPRSVEAATKYFLTQAAASALVLFSSMTNAWHTGQWDITQLTHP---------------TASLILTSAiAMKLGLAPFH 112
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDselienikghplfliTLILIFIGA-AAKSAQGPFY 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 113 FWFPEVLQGSPLTTGLLLSTVMKLPPITLLFMTSPSLNPT-----LLTCMAVLSTALGGWMGLNQTQIRKILAFSSISHL 187
Cdd:PRK12649 235 IWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQL 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 188 GWMAIIIAYNPK------LTLLNFYL--YTLMTTAVFLTFNTI----KTPNLSTLMTTWTKIPSLNAMLFLTLLSLAGLP 255
Cdd:PRK12649 315 AYLMTMYGYTTYhepglgVAAATFHLlnHATFKACLFLVAGIVaheaATRDIRKLGGLRKEMPITFIVASIAALAMAGIP 394
|
....*...
gi 1356686918 256 PLTGFLPK 263
Cdd:PRK12649 395 PLNGFLSK 402
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
85-268 |
4.11e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 48.43 E-value: 4.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 85 DITQLTHPTASLILTSAIAMKLGLAPFHFWFPEVLQGSP-LTTGL---LLSTVMKLPPI---TLLFmTSPSLNpTLLTCM 157
Cdd:PRK12665 202 ELPSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPaPVTAVfagLLTKVGVYAIIrthTLLF-PGGGLD-TLLMVV 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 158 AVLSTALGGWMGLNQTQIRKILAFSSISHLGWMAIIIAYNPKLTLLNFYLYT----LMTTAVFLTFNTIK----TPNLST 229
Cdd:PRK12665 280 ALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVahhiTVQTTLFLVVGLIErqagSSSLRR 359
|
170 180 190
....*....|....*....|....*....|....*....
gi 1356686918 230 LMTTWTKIPSLNAMLFLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK12665 360 LGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-268 |
4.32e-06 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 48.17 E-value: 4.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 55 AATKYFLTQAAASALVLFSSMTNAWHTGQWD------ITQLTHPTASLILTSAI----AMKLGLAPFHFWFPEV-LQGSP 123
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSfdydaiSTQNLSLNTQLILLTGLllgfGIKIPLVPLHTWLPDAyTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 124 LTTGLLLSTVMKLPPITL------LFMTSPSLNPTLLTCMAVLSTALGGWMGLNQTQIRKILAFSSISHLGWMAIIIAYN 197
Cdd:PRK07363 238 AVAILLGGVLAKLGTYGLlrfglqLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAG 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 198 PKLTLLN---------------FYLYTLMTTAVfltfNTIKTPNLSTLMTTWTKIPSLNAMLFLTLLSLAGLPPLTGFLP 262
Cdd:PRK07363 318 TQLSLLGavaqmishglilallFHLVGIVERKV----GTRDLDVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVA 393
|
....*.
gi 1356686918 263 KWLIIQ 268
Cdd:PRK07363 394 EFIVFQ 399
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
4.92e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 48.02 E-value: 4.92e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 33 LEINTLAILPMISKSHHPRSVEAATKYFLTQAAASALVLFSSMTNAWHTGQWDITQLTH--PTASLILTSAIAMKLGLAP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 111 FHFWFPEVLQGSPLTTGLLLSTVM---KLPPITLLFMTSPSLNPtLLTCMAVLSTALGGWMGLNQTQIRKILAFSSISHL 187
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVvkaGVFPLVRCALDVPGLDL-IVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQL 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 188 GWmaIIIAynPKLTLLNFYLYTLMTTAVFLTFNTIKTPNL----STLMTTWTKIPslnamLFLTLLSLAGLPPLTGFLPK 263
Cdd:PRK07234 282 GF--ILAA--PLVGGLYALAHGLVKSTLFLCAGALPSRNFteliSQMLGIGKWIP-----LTMASFSIAGFPLLAGFVSK 352
|
....*...
gi 1356686918 264 WLIIQELT 271
Cdd:PRK07234 353 VLTLKNLL 360
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-210 |
6.04e-06 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 47.83 E-value: 6.04e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 13 LLLGTTITISSNHWIMAWAGLEINTLAILPMISKSHHPRSVEAATKYFLTQAAA------SALVLFSSMTNAWHTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 87 TQLTHP----TASLILTSAIAM------KLGLAPFHFWFPEVLQGSPLTTGLLLSTVMKLPPITLLFMTSPSLNPT---- 152
Cdd:PRK08676 191 TELAAHasllSPSVLGASFLFIfigflaKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSgaae 270
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1356686918 153 ----LLTCMAVLSTALGGWMGLNQTQIRKILAFSSISHLGWMAIIIAYNPKLTLLNFYLYTL 210
Cdd:PRK08676 271 qfsnVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHML 332
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
55-270 |
1.68e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 46.65 E-value: 1.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 55 AATKYFLTQAAASALVLFSSMTNAWHTGQWDITQLTHPTASLILT-----SAIAMKLGLAPFHFWFPEVLQGSPLTTGLL 129
Cdd:PRK08667 163 AGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVflllfLGFGIKAGIIPFHKWLPYAHPASPSNVSAL 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 130 LSTVM-KLPPITLLFMTSPSLNPTLLTCMAVL-----STALGGWMGLNQTQIRKILAFSSISHLGWMAIIIAYNPKLTLL 203
Cdd:PRK08667 243 MSGVMlKVAVYGLVRFLMDVLSPELWWGVLILlagsiSALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVY 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 204 NFYLYTLMT--TAVFLTFN-----------------TIKTPNLSTLMTTWTKIPSLNAMLFLTLLSLAGLPPLTGFLPKW 264
Cdd:PRK08667 323 GLDTLALLAlgGALFHSLNhalfksllfltagsvvhATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASEL 402
|
....*.
gi 1356686918 265 LIIQEL 270
Cdd:PRK08667 403 LLYESF 408
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
15-270 |
2.99e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 45.55 E-value: 2.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 15 LGTTITISSNHWIMAWAGLEINTLA---ILPMISKSHHPRSVEAATKYFLTqaaasALVLFSSMTNAWHTGQWDITQLTH 91
Cdd:PRK06459 83 LGMAIVLTSDNYLLFLAGWEIMTIPsyvAIALTKKNKRPAFVFMAFGELST-----VLILAGFAWAFIISGTTNFSYLPS 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 92 PTASLILTSAIAMKLGLAPFHF--WFPEVLQGSPLTTGLLLSTVMKLPPI----TLLFMTSPSLNPTL---LTCMAVLST 162
Cdd:PRK06459 158 PVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVygilKMTILTQTIPIGYFgltILAIGAFSI 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 163 ALGGWMGLNQTQIRKILAFSSISHLGWM-----AIIIAYNPKLTLLNFYLYTLMT---------TAVFLTFNTIKTPNLS 228
Cdd:PRK06459 238 LFGALYAYVSENVKGLLAFSTIENNGAIlvalgLYMVTKQLITSIEHFSLITVILysfahsvakTGLFLSSGLQEKQSIT 317
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1356686918 229 TLMTTWTKIPSLNAmlFLTLLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK06459 318 YSKKIRNRWIELGL--TLLASSLSGLLPNIGGVASWLLLESL 357
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
82-268 |
4.15e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 45.14 E-value: 4.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 82 GQWDITQLTHPTASLILTSAI---AM-KLGLAPFHFWFPEVLQGSPLTTGLLLSTVMKLPPITLL-----FMTSPSLNPT 152
Cdd:MTH00207 165 GHWSITNMWQTDMNNYIALSImiaAMtKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLirfypFLSSTYWFNP 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 153 LLTCMAVLSTALGGWMGLNQTQIRKILAFSSISHLGWMAIIIAYN-PKLTLLNFYLYTLMTTAVFLTFNTI-----KTPN 226
Cdd:MTH00207 245 ALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGmPKLALFHLITHALFKALLFVCAGSLihshhHSQD 324
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1356686918 227 LSTLMTTWTKIPSLNAMLFLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00207 325 LRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILE 366
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
295-340 |
4.27e-05 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 40.70 E-value: 4.27e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 1356686918 295 RLAYCATITLPPHTTNHMKQWHINKPTSTT-IAILMVLSTMLLPISP 340
Cdd:pfam06444 5 RLSYSTTLTLFPNTNNSKMKWRFNSTKNTLlLPTLTTLSILLLPLTP 51
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
111-268 |
4.63e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 45.07 E-value: 4.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 111 FHFWFPEVLQGSPLTTGLLLSTVMKLPPITLLFMTSP--SLNPTLL---TCMAVLSTALGGWMGLNQTQIRKILAFSSIS 185
Cdd:MTH00020 229 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPlfEQAPLALiivTIVGSLTVFFAATVGLVQNDLKKVIAYSTCS 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 186 HLGWMAIIIAynpkltlLNFY---LYTLMTTAVF--LTF--------------NTIKTPNLSTLmttwtkIPSLNAMLFL 246
Cdd:MTH00020 309 QLGYMVVACG-------LSHYsisLFHLMNHAFFkaLLFlsagsvihalsdeqDMRKMGGLISF------LPLTYIFFLI 375
|
170 180
....*....|....*....|..
gi 1356686918 247 TLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00020 376 GSLSLMGFPYLTGFYSKDLILE 397
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-266 |
5.03e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 45.08 E-value: 5.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 55 AATKYFLTQAAASALVLFSSMTNAWHTG--QWDITQL---THPTASLILTSA-----IAMKLGLAPFHFWFPEV-LQGSP 123
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLrshTLPLSTQLLLLApilvgFGIKIPLVPFHTWLPDAhVEAST 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 124 LTTGLLLSTVMKLPPITLL------FMTSPSLNPTLLTCMAVLSTALGGWMGLNQTQIRKILAFSSISHLGWMAIIIAYN 197
Cdd:PRK06473 238 PVSVLLAGVLLKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAA 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 198 PKLTLLNFYL----YTLMTTAVFLTFNTI--KTPN-----LSTLMTTWTKIPSLNAMLFLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK06473 318 TPLSILAAVFqmisHGLISALLFLLVGVVykKTGSrdvdvLRGLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEFLV 397
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-195 |
5.10e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 45.02 E-value: 5.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 55 AATKYFLTQAAASALVLFSSMTNAWHTGQ--WDITQLTHPTASLILT--------SAIAMKLGLAPFHFWFPE------- 117
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAKSYPLALElllyagflIAFGVKLPIFPLHTWLPDahgeasa 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 118 ----VLQGSPLTTG---LLLSTVMKLPPITLLFmtSPslnptLLTCMAVLSTALGGWMGLNQTQIRKILAFSSISHLGWM 190
Cdd:PRK12561 218 pvsmILAGVLLKMGgyaLIRFNVQMLPDAHVYF--AP-----ALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFV 290
|
....*
gi 1356686918 191 AIIIA 195
Cdd:PRK12561 291 LLGIA 295
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-195 |
2.65e-04 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 42.50 E-value: 2.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 50 PRSVEAATKYFLTQAAASALVLFSSMTNAWH----TGQWDITQLTHPTAS--------LILTSAIAMKLGLAPFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLLNLPLPpgvqywlfLAFFIAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 118 VLQGSPLTTGLLLSTVM-----------KLPpitlLFMTSPSLNPTLLTCMAVLSTALGGWMGLNQTQIRKILAFSSISH 186
Cdd:PRK05846 237 AHVQAPTAGSVLLAGILlkmgaygllrfSLP----LFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISH 312
|
....*....
gi 1356686918 187 LGWMAIIIA 195
Cdd:PRK05846 313 MGFVTLGIF 321
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
75-197 |
5.02e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 41.82 E-value: 5.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 75 MTNAW---HTGQWDITQL-------THPTASLILtsAIAMKLGLAPFHFWFPEVLQGSPLTTGLLLSTVMKLPPITLLFM 144
Cdd:MTH00066 182 LSMAWlamNTNSWELQQIfllndnsTLPLLGLIL--AAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIR 259
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1356686918 145 TSPSL--NPTLLT---CMAVLSTALGGWMGLNQTQIRKILAFSSISHLGWMAIIIAYN 197
Cdd:MTH00066 260 FHPLLenNQTALTiclCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLN 317
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-272 |
6.80e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 41.35 E-value: 6.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 107 GLAPFHFWFPEVLQGSPLTTGLLLSTV-MKLPPITLLFMTSPSLNPTL-----LTCMAVLSTALGGWMGLNQTQIRKILA 180
Cdd:PRK08042 195 GIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 181 FSSISHLGWMAI--------IIAYNPKLTLLNFY--LYTLMTTAVFLT---------FNTIKTPNLSTLMTTWTKIPSLN 241
Cdd:PRK08042 275 YHTLENIGIILLglgagvtgIALEQPALIALGLVggLYHLLNHSLFKSvlflgagsvWFRTGHRDIEKLGGIGKKMPVIS 354
|
170 180 190
....*....|....*....|....*....|.
gi 1356686918 242 AMLFLTLLSLAGLPPLTGFLPKWLIIQELTK 272
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-267 |
7.50e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 41.06 E-value: 7.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 101 AIAMKLGLAPFHFWFPEVLQGSPLTTGLLLSTV-MKLPPITLLFMTSP-------SLNPTLLTcMAVLSTALGGWMGLNQ 172
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGIlLKLGGYGLVRLSWPilplgaqNLAPAVIA-MGIVGIVYGSFATCRQ 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 173 TQIRKILAFSSISHLGWMAIIIAYNPKLTLLNFYLYTL---MTTAVFLTFNTIKTPNLSTLMTTWTK-----IPSLNAML 244
Cdd:MTH00226 318 IDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLahgIVSSLLFILVTILYDRHHTRLIKYYRglsitMPIWGTIM 397
|
170 180
....*....|....*....|...
gi 1356686918 245 FLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00226 398 IVTSLANVAVPPSGNFIGEYLSI 420
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
105-271 |
3.86e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 39.22 E-value: 3.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 105 KLGLapfHFWFPEVLQGSPLTTGLLLSTVMKLPPITLLFMTSP-----SLNPTLLTCMAVLSTALGGWMGLNQTQIRKIL 179
Cdd:MTH00210 227 QLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPlfegsPLALTIVTILGALTAFFAATVGVVQNDLKKVI 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 180 AFSSISHLGWMAIIIAynpkltLLNFY--LYTLMTTAVF--LTF----NTIKTPNLSTLMTTW----TKIPSLNAMLFLT 247
Cdd:MTH00210 304 AYSTCSQLGYMVMVCG------ISNYStsLFHLMNHAFFkaLLFlsagSVIHAVSDEQDMRKMggliKSIPFTYVMILIG 377
|
170 180
....*....|....*....|....
gi 1356686918 248 LLSLAGLPPLTGFLPKWLIIqELT 271
Cdd:MTH00210 378 SLSLMGFPYLTGFYSKDLIL-ELT 400
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
54-216 |
4.15e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 38.85 E-value: 4.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 54 EAATKYFLTQAAASALVLFSSMTNAWHTGQWDITQLTHPTASLILTSAIAMKLGLA----------------PFHFWFPE 117
Cdd:PRK07376 173 DAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLlcilvflgpmaksaqfPLHVWLPD 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 118 VLQGSPLTTGLLLSTVMKLPPITLLFMTSP--SLNPTLLTCMAVLSTA---LGGWMGLNQTQIRKILAFSSISHLGWMAI 192
Cdd:PRK07376 253 AMEGPTPISALIHAATMVAAGVFLVARMYPvfEQFPAVMTVIAWTGAItafLGASIALTQNDIKKGLAYSTISQLGYMVM 332
|
170 180
....*....|....*....|....*..
gi 1356686918 193 ---IIAYNPKltllnfyLYTLMTTAVF 216
Cdd:PRK07376 333 amgCGAYSAG-------LFHLMTHAYF 352
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
111-266 |
6.33e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 38.41 E-value: 6.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 111 FHFWFPEVLQGSPLTTGLLLSTVMKLPPITLLFMTSPSLNPTLLTCMAVL----STAL-GGWMGLNQTQIRKILAFSSIS 185
Cdd:MTH00208 255 LHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCLilgsLTALfAASTAISQHDIKKIIAYSTTS 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 186 HLGWMAIIIAYN-PKLTLLNFYLYTLMTTAVFLTFNTI-----------KTPNLSTLMttwtkiPSLNAMLFLTLLSLAG 253
Cdd:MTH00208 335 QLGLMVVAIGLNqPNLALFHICTHAFFKAMLFLCSGSIihslnneqdlrKMGGLSFLL------PVTSSCIILGSLALMG 408
|
170
....*....|...
gi 1356686918 254 LPPLTGFLPKWLI 266
Cdd:MTH00208 409 TPFLAGFYSKDLI 421
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
68-267 |
7.87e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 38.01 E-value: 7.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 68 ALVLFSSMTNAWHTGQWDITQLTHPTASLILTSAIAMKLGLAPFHFWFPEVLQGSPLTTGLLLSTVMKLPPITLLFMTSP 147
Cdd:MTH00211 180 SMVWLLLNLNSWEISQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSP 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1356686918 148 SLNP-----TLLTCMAVLSTALGGWMGLNQTQIRKILAFSSISHLGWMAIIIAYN-PKLTLlnFYLYT--------LMTT 213
Cdd:MTH00211 260 LFQNnqlilGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNqPQLAF--LHICThaffkamlFMCS 337
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1356686918 214 AVFL--TFNT--IKTPNLSTLMTTWTKIpslnaMLFLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00211 338 GSIIhgLNNEqdIRKMGGLSKNLPFTSS-----CLFLGSLALMGFPFLSGFFSKDLIL 390
|
|
| |
