|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.77e-164 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 461.98 E-value: 2.77e-164
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 1 MNPQAMLVSTLSLLLGTTIAISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLVQATASALLLFSSMINAQF 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 81 TGQWDITQLTHPVSCTLLTIAISMKLGLAPFHFWFPEVLQGSSLMTSLLLATLMKVPPTILLLLASPSLNQNLLCALAIT 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 161 SAALGGWMGLNQTQIRKILAFSSISHLGWMTIVIICNPKLALITFYLYALTTTAIFFTLNTINTSMLSTMMTAWTKIPPL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 241 SAILMMTLLSLAGLPPLTGFLPKWMILQELTKQELTVTATIIALLSLLGLFFYLRLAYCATITLPPNSANHMKHWQFNKP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 1462331758 321 VNTLTTIFTMLSIMLLPLSPMITTIL 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.59e-138 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 396.87 E-value: 1.59e-138
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 1 MNPQAMLVSTLSLLLGTTIAISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLVQATASALLLFSSMINAQF 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 81 TGQWDITQLTHPVSCTLLTIAISMKLGLAPFHFWFPEVLQGSSLMTSLLLATLMKVPPTILLLLASPSlNQNLLCALAIT 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 161 SAALGGWMGLNQTQIRKILAFSSISHLGWMTIVIICNPKLALITFYLYALTTTAIFFTLNTINTSMLSTMMTAWTKIPPL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 241 SAILMMTLLSLAGLPPLTGFLPKWMILQELTKQELTVTATIIALLSLLGLFFYLRLAYCATITLPPNSANHMKHWQFNKP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*..
gi 1462331758 321 VNTLT-TIFTMLSIMLLPLSPMITTIL 346
Cdd:MTH00135 320 QLTLPlAISTTATLMLLPLTPAILALL 346
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
3.74e-133 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 383.12 E-value: 3.74e-133
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 1 MNPQAMLVSTLSLLLGTTIAISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLVQATASALLLFSSMINAQF 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 81 TGQWDITQLTHPVSCTLLTIAISMKLGLAPFHFWFPEVLQGSSLMTSLLLATLMKVPPTILLLLASPSLNQNLLCALAIT 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 161 SAALGGWMGLNQTQIRKILAFSSISHLGWMTIVIICNPKLALITFYLYALTTTAIFFTLNTINTSMLSTMMTAWTKIPPL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 241 SAILMMTLLSLAGLPPLTGFLPKWMILQELTKQELTVTATIIALLSLLGLFFYLRLAYCATITLPPNSANHMKHWQFNKP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*.
gi 1462331758 321 VNTLTTIFTMLSIMLLPLSPMITTIL 346
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNLF 346
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
8.20e-118 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 344.14 E-value: 8.20e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 1 MNPQAMLVSTLSLLLGTTIAISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLVQATASALLLFSSMINAQF 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 81 TGQWDITQLTHPVSCTLLTIAISMKLGLAPFHFWFPEVLQGSSLMTSLLLATLMKVPPTILLLLASPSLNQNLLCALAIT 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 161 SAALGGWMGLNQTQIRKILAFSSISHLGWMTIVIICNPKLALITFYLYALTTTAIFFTLNTINTSMLSTMMTAWTKIPPL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 241 SAILMMTLLSLAGLPPLTGFLPKWMILQELTKQELTVTATIIALLSLLGLFFYLRLAYCATITLPPNSANHMKHWQFNKP 320
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320
|
330 340
....*....|....*....|....*.
gi 1462331758 321 -VNTLTTIFTMLSIMLLPLSPMITTI 345
Cdd:MTH00105 321 kPMTLLPTLIILSTMLLPLTPMLSIL 346
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
8.36e-94 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 283.01 E-value: 8.36e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 1 MNPQAMLVSTLSLLLGTTIAISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLVQATASALLLFSSMINAQF 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 81 TGQWDITQLTHPVSCTLLTIAISMKLGLAPFHFWFPEVLQGSSLMTSLLLATLMKVPPTILLLLASPSLNQNLLCALAIT 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 161 SAALGGWMGLNQTQIRKILAFSSISHLGWMTIVIICNPKLALITFYLYALTTTAIFFTLNTINTSMLSTMMTAWTKIPPL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 241 SAILMMTLLSLAGLPPLTGFLPKWMILQELTKQELTVTATIIALLSLLGLFFYLRLAYCATITLPPNSANHMKHWQFNKP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 1462331758 321 VNTLTTIFTMLSIMLLPLSPMITTIL 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-336 |
6.06e-90 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 273.34 E-value: 6.06e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 1 MNPQAMLVSTLSLLLGTTIAISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLVQATASALLLFSSMINAQF 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 81 TGQWDITQLTHPVSCTLLTIAISMKLGLAPFHFWFPEVLQGSSLMTSLLLATLMKVPPTILLLLASPSLNQNLLCALAIT 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 161 SAALGGWMGLNQTQIRKILAFSSISHLGWMTIVIICNPKLALITFYLYALTTTAIFFTLNTINTSMLSTMMTAWTKIPPL 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 241 SAILMMTLLSLAGLPPLTGFLPKWMILQELTKQELTVTATIIALLSLLGLFFYLRLAYCATITLPPNSANHMKHWQFNKP 320
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGN 320
|
330
....*....|....*.
gi 1462331758 321 VNTLTTIFTMLSIMLL 336
Cdd:MTH00041 321 ITVYGVILSILSSISI 336
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
4.01e-60 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 196.20 E-value: 4.01e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 1 MNPQAMLVSTLSLLLGTTIAISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLVQATASALLLFSSMINAQF 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 81 TGqwditqLTHPVSCTLLTIAISMKLGLAPFHFWFPEVLQGSSLMTSLLLATLMKVPPTILLLLaspSLNQNLLCALAIT 160
Cdd:MTH00160 82 LM------LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSY---LINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 161 SAALGGWMGLNQTQIRKILAFSSISHLGWMTIVIICNPKLALITFYLYALTTTAIFFTLNTINTSMLSTMMTAWTKIPPL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 241 SAILMMTLLSLAGLPPLTGFLPKWMILQELTKQELTVTATIIALLSLLGLFFYLRLAYCAtITLPPNSANHMKHWQFNKP 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSS-LMLNYNKNKWNLKKKKNKF 311
|
330 340
....*....|....*....|....*
gi 1462331758 321 vNTLTTIFTMLSIMLLPLSPMITTI 345
Cdd:MTH00160 312 -SLILNFLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
5-336 |
1.72e-55 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 183.93 E-value: 1.72e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 5 AMLVSTLSLLLGTTIAISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLVQATASALLLFSSMINAQFTGQW 84
Cdd:MTH00144 5 SNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 85 DITqlthpvscTLLTIAISMKLGLAPFHFWFPEVLQGSSLMTSLLLATLMKVPPTILLLLASPSLN-QNLLCALAITSAA 163
Cdd:MTH00144 85 FSM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWlAYLLCVISVLSAL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 164 LGGWMGLNQTQIRKILAFSSISHLGWMTIVIICNPKLALITFYLYALTTTAIFFTLNTINTSMLStMMTAWTKIPPLSAI 243
Cdd:MTH00144 157 VGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMK-DLGSLKPSYKTGLS 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 244 LMMTLLSLAGLPPLTGFLPKWMILQELTKQELTVTATIIALLSLLGLFFYLRLAYCATItlppnSANHMKHWQFNKPVNT 323
Cdd:MTH00144 236 IISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL-----SSSKSKKSNSSKVLNS 310
|
330
....*....|...
gi 1462331758 324 LTTIFTMLSIMLL 336
Cdd:MTH00144 311 SIISLNLLGGLLF 323
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-310 |
3.50e-47 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 162.64 E-value: 3.50e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 1 MNPQAMLVSTlSLLLGTTIAISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLVQATASALLLFSSminaqf 80
Cdd:MTH00011 4 TFPTMFLFSS-TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------ 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 81 TGQWDITQLTHPVSCTLLTIAISMKLGLAPFHFWFPEVLQGSSLMTSLLLATLMKVPPTILLLLASPSLNQNLLCALAIT 160
Cdd:MTH00011 77 TMMWSFPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAM 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 161 SAALGGWMGLNQTQIRKILAFSSISHLGWMTIVIICNPKLALITFYLYALTTTAIFFTLNTINTSMLSTMMTAWTKIPPL 240
Cdd:MTH00011 157 SALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTT 236
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 241 SAILMMTLLSLAGLPPLTGFLPKWMILQELTKQELTVTATIIALLSLLGLFFYLRLAYcATITLPPNSAN 310
Cdd:MTH00011 237 SMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSS 305
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
11-298 |
1.59e-42 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 150.21 E-value: 1.59e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 11 LSLLLGTTIAISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLVQATASALLLFSSMinAQFTGQWditqlT 90
Cdd:MTH00197 5 FIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGS--LSFSNLY-----L 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 91 HPVSCTLLTIAISMKLGLAPFHFWFPEVLQGSSLMTSLLLATLMKVPPTILLLLASPSLNQNLLCALaiTSAALGGWMGL 170
Cdd:MTH00197 78 SLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFMGLLICSV--LSSLIGGIGGM 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 171 NQTQIRKILAFSSISHLGWMTIVIICNPKLALITFYLYALTTTAIFFTLNTINTSMLSTMMTAWTKIPPLSAILMMTLLS 250
Cdd:MTH00197 156 NQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLS 235
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 1462331758 251 LAGLPPLTGFLPKWMILQELTKQELTVTATIIALLSLLGLFFYLRLAY 298
Cdd:MTH00197 236 LGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAY 283
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-298 |
2.39e-39 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 144.87 E-value: 2.39e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 14 LLGTTIAISSNHWMMAWTGLEINTLAILPLIS-KSHHPRAIEASTKYFLVQATASALLLF-SSMINAqFTGQWDITQLTH 91
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYG-ATGSLNLAGIAA 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 92 PVS------------CTLLTIAISMKLGLAPFHFWFPEVLQGSSLMTSLLLATLMKV----PPTILLLLASPSLN---QN 152
Cdd:COG1007 191 ALAagganspllllgLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaALLRLLVEAFPGLAadwQL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 153 LLCALAITSAALGGWMGLNQTQIRKILAFSSISHLGWMTIVIICNPKLAL--ITFYL--YALTTTAIFFTLntintSMLS 228
Cdd:COG1007 271 LLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNLGAFAVI-----LLLS 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 229 TMMTAWTKI----------PPLSAILMMTLLSLAGLPPLTGFLPKWMILQELTKQELTVTATIIALLSLLGLFFYLRLAY 298
Cdd:COG1007 346 RKGGEAEEIedlaglarrsPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVK 425
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
4.55e-33 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 127.63 E-value: 4.55e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 14 LLGTTIAISSNHWMMAWTGLEINTLAILPLIS-KSHHPRAIEASTKYFLVQATASALLLFSSMINAQFTGQWDITQLTHP 92
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 93 VSCT------------LLTIAISMKLGLAPFHFWFPEVLQGSSLMTSLLLATLMKVPPTILLL----LASPSL---NQNL 153
Cdd:PRK05777 193 LADGsgnsllllfglvFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLrllvVAFGGLsedWQQV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 154 LCALAITSAALGGWMGLNQTQIRKILAFSSISHLGWMTIVIICNPKLAL--ITFYL--YALTTTAIF-FTLNTINTSMLS 228
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYLlaYLFMTLGAFgVISLLRRKGGEA 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1462331758 229 TMMTAWTKI----PPLSAILMMTLLSLAGLPPLTGFLPKWMILQELTKQELTVTATIIALLSLLGLFFYLRL 296
Cdd:PRK05777 353 ESISDFAGLskrsPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
6.01e-33 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 125.53 E-value: 6.01e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 13 LLLGTTIAISSNHWMMAWTGLEINTLAILPLI-SKSHHPRAIEASTKYFLVQATASALLLFS-------------SMINA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 79 QFTGQWDITQLTHPVSCTLLTIAISMKLGLAPFHFWFPEVLQGSSLMTSLLLATLMKVppTILLLLASPSLNQNLLCALA 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKL--GIFSILVSIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 159 ITSAALGGWMGLNQTQIRKILAFSSISHLGWMTIVIICNP----KLALITFYLYALTTTAIFFTLNTINT--SMLSTMMT 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFSIILALNVykNLIIEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1462331758 233 AWTKIPPLSAILMMTLLSLAGLPPLTGFLPKWMILQELTKQELTVTATIIALLSLLGLFFYLRL 296
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-297 |
3.57e-29 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 116.97 E-value: 3.57e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 14 LLGTTIAISSNHWMMAWTGLEINTLAILPLIS-KSHHPRAIEASTKYFLVQATASALLLFSSMINAQFTGQWDITQLTHP 92
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 93 VSCT------------LLTIAISMKLGLAPFHFWFPEVLQGSSLMTSLLLATLMKVPPTILLLLASPSL-------NQNL 153
Cdd:TIGR01770 192 LSNGmlnisllllgivLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIlfgfseaWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 154 LCALAITSAALGGWMGLNQTQIRKILAFSSISHLGWMTIVIICNPK--LALITFYL--YALTTTAIFFTLntintSMLST 229
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLegIKAVLFYIfiYALMSLGAFGVL-----SLLRS 346
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1462331758 230 MMTAWT----------KIPPLSAILM-MTLLSLAGLPPLTGFLPKWMILQELTKQELTVTATIIALLSLLGLFFYLRLA 297
Cdd:TIGR01770 347 YKDEWIeyisdfaglfKTNPILAILIlIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
5.10e-29 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 113.18 E-value: 5.10e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 23 SNHWMMAWTGLEINTLAILPLI-SKSHHPRAIEASTKYFLVQATASALLLFSSMINAQFTGQWDITQLTHPVSCT----- 96
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGlnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 97 ------LLTIAISMKLGLAPFHFWFPEVLQGSSLMTSLLLA-TLMKVPPTIL---LLLASPSLN--QNLLCALAITSAAL 164
Cdd:pfam00361 81 llllflLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAaTLVKAGGYGLirrSLLYLPSSPfiQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 165 GGWMGLNQTQIRKILAFSSISHLGWMTIVIICNP----KLALITFYLYALTTTAIFFTLNTINTSMLST-----MMTAWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTiygiQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTrnirdYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 1462331758 236 KIPPLSAILMMTLLSLAGLPPLTGFLPKWMILQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
11-296 |
1.94e-28 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 114.73 E-value: 1.94e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 11 LSLLLGTTIAISSNHWMMAWTGLEINTLAILPLIS-KSHHPRAIEASTKYFLVQATASALLLFSSMINAQFTGQWDI--- 86
Cdd:MTH00199 104 LIVALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqgi 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 87 -TQLTHPVSCTLLTIAISMKLGLAPFHFWFPEVLQGSSLMTSLLLATLMKVPPTILLLLASPSLNQNLLCalAITSAALG 165
Cdd:MTH00199 184 nSILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSIIYG 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 166 GWMGLNQTQIRKILAFSSISHLGWMTIVIICNP----KLALITFYLYALTTTAIFFTLNTIN--TSMLSTMMTAWTKIPP 239
Cdd:MTH00199 262 AIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSfesiQASLIYMIIYVIMSICSFSIILSLKltKGLIVEVSGLSRKNPV 341
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1462331758 240 LSAILMMTLLSLAGLPPLTGFLPKWMILQELTKQELTVTATIIALLSLLGLFFYLRL 296
Cdd:MTH00199 342 IALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-296 |
2.07e-25 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 105.61 E-value: 2.07e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 13 LLLGTTIAISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLVQATASALLLFSSMINAQFTGQWDITQLTHP 92
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAR 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 93 VS----------CTLLTIAISMKLGLAPFHFWFPEVLQGSSLMTSLLLATLM-KVPP-----TILLLLASPSLN--QNLL 154
Cdd:COG0651 196 LAeldpglllaaFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLtKVGVyailrVLTLLFGADPALflGTLL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 155 CALAITSAALGGWMGLNQTQIRKILAFSSISHLGWMTIVIICNPKLALITFYLY----ALTTTAIFFT----LNTINTSM 226
Cdd:COG0651 276 LVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHllnhALAKALLFLAagaiERATGTRD 355
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 227 LSTMMTAWTKIPPLSAILMMTLLSLAGLPPLTGFLPKWMILQELTKQELTVTATIIALLSLLGLFFYLRL 296
Cdd:COG0651 356 LDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
3-296 |
5.27e-22 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 96.85 E-value: 5.27e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 3 PQAMLVSTLSLLLGTTIAISSNHWMMAWTGLEINTLAILPLISKSHHPRAI---------EASTKYFLVQATASALLLFS 73
Cdd:MTH00198 187 PRSGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFG 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 74 SMINAQFTGQWDI--TQLTHPVSCT------------LLTIAISMKLGLAPFHFWFPEVLQGSSLMTSLLLATLMKVppT 139
Cdd:MTH00198 267 CALYFGFTGNEGMlgTILSATLETTnielrqgslgylFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--T 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 140 ILLLLASPSLNQNLLCALAITSAALGGWMGLNQTQIRKILAFSSISHLGWMTIVIICNPKLALITFYLYA---LTTTAIF 216
Cdd:MTH00198 345 VYILLTSLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAvtyLVSALAS 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 217 FTLNTI-------------------NTSMLSTM--MTAWTKIPPLSAI-LMMTLLSLAGLPPLTGFLPKWMILQELTKQE 274
Cdd:MTH00198 425 FTVICTleefgtrtptsrqrdgsfgNYNLVRRLvdLTILSRGQPYIAFsLAIVFLSLAGIPPLLGFLGKWFILVGSIKIA 504
|
330 340
....*....|....*....|....*....
gi 1462331758 275 LTVTATIIALLSLLGL-------FFYLRL 296
Cdd:MTH00198 505 FSSSLSIYYLVALFAIictcisaFYYIRI 533
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-311 |
3.35e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 76.46 E-value: 3.35e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 33 LEINTLAILPLISKSHHPRAIEASTKYFLVQATASALLLFSSMINAQFTGQWDITQLTH--PVSCTLLT------IAISM 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGalAENPTVVTafgfvlLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 105 KLGLAPFHFWFPEVLQG-SSLMTSLLLATLMKVPPTILLLL---------ASPSLNQNLLCALAITSAALGGWMGLNQTQ 174
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAVYALIRIyftvfggdfRFALGLGWLLAVLALLSMLVGSLAALGQDD 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 175 IRKILAFSSISHLGWMTIVIICNPKLALI--TFYL--YALTTTAIFFTLNTI----NTSMLSTMMTAWTKIPPLSAILMM 246
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLAAGAIevtyGTRRLSELSGLGRRMPLTAAAFAV 374
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1462331758 247 TLLSLAGLPPLTGFLPKWMILQELTKQELTVTATIIALLSLLGLFFYLRLAYCATITLPPNSANH 311
Cdd:PRK08375 375 ASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPPGSEA 439
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-296 |
1.30e-14 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 74.66 E-value: 1.30e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 51 RAIEASTKYFLVQATASALLL--FSSM--INAQFTGQWDI------TQLTHPVSC----TLLTIAISMKLGLAPFHFWFP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVygFSWLygLSGGEIELQEIvnglinTQMYNSPGIsialIFITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 117 EVLQGS-----------SLMTSLLLATlmkvppTILLLLASPSLNQ--NLLCALAITSAALGGWMGLNQTQIRKILAFSS 183
Cdd:CHL00049 239 DVYEGSptpvvaflsvtSKVAASALAT------RIFDIPFYFSSNEwhLLLEILAILSMILGNLIAITQTSMKRMLAYSS 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 184 ISHLGWMTIVIIC----NPKLALIT---FYLYA-LTTTA--IFFTLNTiNTSMLSTMMTAWTKIPPLSAILMMTLLSLAG 253
Cdd:CHL00049 313 IGQIGYVIIGIIVgdsnDGYASMITymlFYIFMnLGTFAciVLFGLRT-GTDNIRDYAGLYTKDPFLALSLALCLLSLGG 391
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 1462331758 254 LPPLTGFLPKWMILQELTKQELTVTATIIALLSLLGLFFYLRL 296
Cdd:CHL00049 392 IPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKI 434
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
1.61e-13 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 71.24 E-value: 1.61e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 50 PRAIEASTKYFLVQATASALLLF-SSMINAQFTGQWDITQLTHPVSCT---LLTIA-------ISMKLGLAPFHFWFPEV 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGSTQLSAIALALITSpslGLALAlvfviagIAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 119 LQGSSLMTSLLLATLMKVP----PTILLLLASPSLN---QNLLCALAITSAALGGWMGLNQTQIRKILAFSSISHLGWMT 191
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAgfalAIRLLVTAFPSFDeqwKLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 192 IVIICNPKLALITFYLYALT---------TTAIFFTLNTiNTSMLSTMMTAWTKIPPLSAILMMTLLSLAGLPPLTGFLP 262
Cdd:PRK02504 317 IGLVAGTEAGYASMVFYLLAylfmnlgafACVILFSLRT-GTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFG 395
|
.
gi 1462331758 263 K 263
Cdd:PRK02504 396 K 396
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-292 |
2.03e-13 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 70.74 E-value: 2.03e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 50 PRAIEASTKYFLVQATASALLLfSSMINAQFTGQW--DITQL-THPVSCTLLT-------IAISMKLGLAPFHFWFPEVL 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLML-LAILGLYFLGGGtfDLLELlNLPLPFGVQTwlflaffIAFAVKVPLFPLHTWLPDAH 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 120 QGSSLMTSLLLA-TLMKVPPTILLLLASPSLNQN------LLCALAITSAALGGWMGLNQTQIRKILAFSSISHLGWMTI 192
Cdd:TIGR01972 231 VEAPTAGSVILAgVLLKMGTYGFLRFNLPLFPDAslyfapVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 193 VIICNPKLALI--TFYLYA--LTTTAIFFTLNTI----NTSMLSTMMTAWTKIPPLSAILMMTLLSLAGLPPLTGFLPKW 264
Cdd:TIGR01972 311 GIFSFNELGISgaVFQMIShgLITAALFLLVGVLyeraHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEF 390
|
250 260
....*....|....*....|....*...
gi 1462331758 265 MILQELTKqeltvTATIIALLSLLGLFF 292
Cdd:TIGR01972 391 LILLGSFK-----VNPVVAFLAALGIVL 413
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-292 |
1.93e-12 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 67.80 E-value: 1.93e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 49 HPRAIEASTKYFLVQATASALLLFSSMINAQFTGQW--DITQLT-HPVSCT-------LLTIAISMKLGLAPFHFWFPEV 118
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAaAPLPLTaqlllflAFFIAFAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 119 LQGSSLMTSLLLA-TLMKVPPTILLLLASP------SLNQNLLCALAITSAALGGWMGLNQTQIRKILAFSSISHLGWMT 191
Cdd:COG1008 236 HVEAPTAGSVLLAgVLLKMGGYGLLRFALPlfpeasAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVL 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 192 IVIICNPKLALI--TFYLYA--LTTTAIFFTLNTINTSMLSTMMTA----WTKIPPLSAILMMTLLSLAGLPPLTGFLPK 263
Cdd:COG1008 316 LGIFALNPLGLQgaVLQMVShgLITAALFLLVGVLYDRTHTRDIADlgglAKRMPVLAALFLLAALASLGLPGTSGFVGE 395
|
250 260
....*....|....*....|....*....
gi 1462331758 264 WMILQELTKqeltvTATIIALLSLLGLFF 292
Cdd:COG1008 396 FLVLLGAFQ-----VNPWLAILAALGLIL 419
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
34-298 |
1.13e-11 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 65.79 E-value: 1.13e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 34 EINTLAILPLISKSHHpRAIEASTKYFLVQATASALLLFSSMINAQFTGQWDIT-------QLTHPVSCTLLTIAIS--- 103
Cdd:PRK08668 128 EIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFAdisqgliNDTSTGFALIVFLFLLafg 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 104 -MKLGLAPFHFWFPE-----------VLQGS-SLMTSLLLATLMKVPPTILLLLASP-----SLNQNLLCALAITSAALG 165
Cdd:PRK08668 207 vAKAGIFPLHVWAPDayseapqsfsaVLSGQlSKLGAYGFLLVLYVLPGTKLFSEFGtyrgvPLFNYILAWLGNISIIVG 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 166 GWMGLNQTQIRKILAFSSISHLGWMTIVIICNPKL----ALITFYLYALTTTAIFFTLNTI----NTSMLSTMMTAWTKI 237
Cdd:PRK08668 287 TLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLgfagGLFHVFNHALFKGLFFLIFAAViyrtGTTKISEMGGLIEKM 366
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1462331758 238 PPLSAILMMTLLSLAGLPPLTGFLPKWMILQELTKQELTVTATIIALLSLLGLFFYLRLAY 298
Cdd:PRK08668 367 PFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPLA 427
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
20-288 |
5.59e-11 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 63.41 E-value: 5.59e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 20 AISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLVQATASALLLFSS----------MINAQFTGQW-DITQ 88
Cdd:PRK06458 124 ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTilvyanaatvMGDGEMAILWtELLK 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 89 LTHPVSCTLLTIAISM-------KLGLAPFHFWFPEV-LQGSSLMTSLLLATLMKVPPTILL---LLASPSLN----QNL 153
Cdd:PRK06458 204 HASLLDPTLMKLAFVFlligfgtKVGLFPMHAWLPDAhSEAPSPVSALLSGVLLNVALYAVLryyILIDAAIGsdfpGRL 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 154 LCALAITSAALGGWMGLNQTQIRKILAFSSISHLGWMTIVIICNPKLA----LITFYLYALTTTAIFFT----LNTINTS 225
Cdd:PRK06458 284 LLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGifaaLLHMLNHSLTKSAIFFAsgnvLQKYGTR 363
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1462331758 226 MLSTMMTAWTKIPPLSAILMMTLLSLAGLPPLTGFLPKWMILQElTKQELTVTATIIALLSLL 288
Cdd:PRK06458 364 DINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTA-GLARGPLLIAILLLLLLT 425
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-292 |
7.53e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 62.85 E-value: 7.53e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 13 LLLGTTIAISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLVQATA------SALLLFSSMINAQFTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 87 TQLTHPV----------SCTLLTIAISMKLGLAPFHFWFPEV-LQGSSLMTSLLLATLMKVPPT-ILLLLASPSLNQ--- 151
Cdd:PRK08676 191 TELAAHAsllspsvlgaSFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYgILRLSALLRQSGaae 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 152 ---NLLCALAITSAALGGWMGLNQTQIRKILAFSSISHLGWMTIVIICNPKLAL--ITFYL--YALTTTAIFFTLNTINT 224
Cdd:PRK08676 271 qfsNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALfwMLFHMlaHSLVKSGLFFSAGILHR 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1462331758 225 SMLSTM---MTAWTKIPPLSAI-LMMTLLSLAGLPPLTGFLPKWMILQELTKQELTVTATIIALLSLLGLFF 292
Cdd:PRK08676 351 QYRSDRfdrIFDVFRLQPVAAWgVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSF 422
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-287 |
2.31e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 61.65 E-value: 2.31e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 33 LEINTLAILPLIS-KSHHPRAIEASTKYFLVQATASALLLFS-SMINAQFtGQWDITQLTHPVSCT----------LLTI 100
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGiALLYGQY-GTLNMAYLAVKMSENptvvakialaLFIA 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 101 AISMKLGLAPFHFWFPEVLQG--SSLMTSLLLAT------LMKVPPTILLLLASPSLNQNLLCALAITSAALGGWMGLNQ 172
Cdd:PRK08376 229 GLAMKSGAVPVHMWLPDAYPAapSSISAMLLVIKqaglyaLARVLFSIYGPAINLATVGWVIIILGCLTMFVGVAMAVVQ 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 173 TQIRKILAFSSISHLGWM------TIVIICNPKLALITFY-----------------LYALTTTAIFFTLNTINTSMLST 229
Cdd:PRK08376 309 KDVKRLLAYHSVSQIGYMllglgvGLAALGDPAMASYGEIalaggiyhivnhalykaLLFLTAGAVIYETGTRNLNELGG 388
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 230 MMtawTKIPPLSAILMMTLLSLAGLPPLTGFLPKWMILQE--LTKQELTVTATIIALLSL 287
Cdd:PRK08376 389 LA---RTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESsaLFNPILGVIAMIGSVLTL 445
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
29-304 |
2.75e-10 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 61.60 E-value: 2.75e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 29 AWtglEINTLAILPLISKSHhPRAIEASTKYFLVQATASALLLFSSMINAQFTGQWDITQLTHPVS---CTLLTIAISMK 105
Cdd:PRK12650 138 AW---ELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVwaeKPGLTTVVAVL 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 106 LGLA--------PFHFWFPEVLQGSSLMTSLLLATLMKVPPTILLLLASPSLNQN-----LLCALAITSAALGGWMGLNQ 172
Cdd:PRK12650 214 IAVAaftksaqfPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVavwnwLLIIVGMITALMGAVFAVQK 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 173 TQIRKILAFSSISHLGWMTIVIICNPKLAL----ITFYLYALTTTAIFFTLNTIN----TSMLSTMMTAWTKIPPLSAIL 244
Cdd:PRK12650 294 TDLKKLTAYSTVSQLGWIVATIGVGTPFALtaavVHTLAHALFKSSLFMLIGVVDhqagTRDIRRLGSLWRRMPFTFVSV 373
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 245 MMTLLSLAGLPPLTGFLPKWMILQELTKQELTvTATIIALLSLLGLFFYLRLAYCATITL 304
Cdd:PRK12650 374 TIAALSMAAVPPLFGFVSKEGMLTAFLEAPGG-NAGVVLLLVGAALGAVFTFAYSARLVL 432
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-298 |
3.89e-09 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 57.85 E-value: 3.89e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 48 HHPRAIEASTKYFLVQATASALLLFSSMINAQFTGQWDITQL----THPVSCTLLTIAISM-------KLGLAPFHFWFP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELlaaaPTILSSPLLTLILLLlllgafgKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 117 EVLQG----SSLMTSlllAT--------LMKVPPtilLLLASPSLnQNLLCALAITSAALGGWMGLNQTQIRKILAFSSI 184
Cdd:COG1009 236 DAMEGptpvSALLHA---ATmvkagvylLARLSP---LFALSPVW-LTVVAIIGAITALFAALIALAQTDIKRVLAYSTV 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 185 SHLGWMTIVI-ICNPKLALitFYL--YALTTTAIFFTLNTINTSMLSTMMTA----WTKIPPLSAILMMTLLSLAGLPPL 257
Cdd:COG1009 309 SQLGYMFLALgVGAYVAAL--FHLltHAFFKALLFLGAGSVIHATGTRDIRKmgglRKKMPITAITFLIGALSLAGIPPF 386
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 1462331758 258 TGFLPKWMILQE-LTKQELTVTATIIALL-SLLGLFFYLRLAY 298
Cdd:COG1009 387 AGFFSKEAILEAaLEAGGLGPLLLAVALLgAFLTAFYSFRLFF 429
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-298 |
7.07e-09 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 57.01 E-value: 7.07e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 95 CTLLTIAISMKLGLAPFHFWFPEVLQGSSLMTSLLLATLMKVPPTILLLLASPSLNQNLLCALAIT-----SAALGGWMG 169
Cdd:MTH00020 213 CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTivgslTVFFAATVG 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 170 LNQTQIRKILAFSSISHLGWMtiVIICNpklalITFY---LYALTTTAIFFTL---------NTINTSMLSTMMTAWTKI 237
Cdd:MTH00020 293 LVQNDLKKVIAYSTCSQLGYM--VVACG-----LSHYsisLFHLMNHAFFKALlflsagsviHALSDEQDMRKMGGLISF 365
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1462331758 238 PPLSAILMMT-LLSLAGLPPLTGFLPKWMILQELTKQELTVTATIIALLS-LLGLFFYLRLAY 298
Cdd:MTH00020 366 LPLTYIFFLIgSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSaLLTAFYSIRLIY 428
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-267 |
8.58e-09 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 56.75 E-value: 8.58e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 50 PRAIEASTKYFLVQATASALLLFSSM----INAQFTGQWDITQL-THPVSCTLLT-------IAISMKLGLAPFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIylvvVYYNATGTFDIADLlNLPLPPGVQYwlflaffIAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 118 V-LQGSSLMTSLLLATLMKVPPTILL---LLASPSLNQN---LLCALAITSAALGGWMGLNQTQIRKILAFSSISHLGWM 190
Cdd:PRK05846 237 AhVQAPTAGSVLLAGILLKMGAYGLLrfsLPLFPDASHEfapIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFV 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 191 TIVIICNPKLAL--ITFYLYA--LTTTAIFFTLNTINTSMLSTMMTA----WTKIPPLSAILMMTLLSLAGLPPLTGFLP 262
Cdd:PRK05846 317 TLGIFAGNQLGIqgAIFQMIShgLSSAALFLLVGVLYDRLHTRDIADygglAKVMPVLAAFFLFFAMASLGLPGTSGFVG 396
|
....*
gi 1462331758 263 KWMIL 267
Cdd:PRK05846 397 EFLIL 401
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
8.85e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 56.50 E-value: 8.85e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 33 LEINTLAILPLISKSHHPRAIEASTKYFLVQATASALLLFSSMINAQFTGQWDITQLTH--PVSCTLLTIAISMKLGLAP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 111 FHFWFPEVLQGSSLMTSLLLATLM---KVPPTILLLLASPSLNQnLLCALAITSAALGGWMGLNQTQIRKILAFSSISHL 187
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVvkaGVFPLVRCALDVPGLDL-IVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQL 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 188 GWmtivIICNPKLALITFYLYALTTTAIFFTLNTIN----TSMLSTMMTAWTKIPplsaiLMMTLLSLAGLPPLTGFLPK 263
Cdd:PRK07234 282 GF----ILAAPLVGGLYALAHGLVKSTLFLCAGALPsrnfTELISQMLGIGKWIP-----LTMASFSIAGFPLLAGFVSK 352
|
....*...
gi 1462331758 264 WMILQELT 271
Cdd:PRK07234 353 VLTLKNLL 360
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
79-263 |
1.94e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 56.09 E-value: 1.94e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 79 QFTGQWDITQL-THPVSCTLLTIAISM-------KLGLAPFHFWFPEVLQGSSLMTSLLLATLMKVPPTILLLLASPSLN 150
Cdd:PRK12644 182 QAAGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFA 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 151 -----QNLLCALAITSAALGGWMGLNQTQIRKILAFSSISHLGWMTIVI-ICNPKLALITFYL---YALTTTAIFFTLNT 221
Cdd:PRK12644 262 dvpvwRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVgIGTRDAALAGLAMllaHALFKAALFLVVGI 341
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1462331758 222 IN----TSMLSTMMTAWTKIPPLSAILMMTLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 342 IDhstgTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
53-298 |
8.18e-08 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 53.80 E-value: 8.18e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 53 IEASTKYFLVQATASALLLFSSMINAQFTGQWDITQL-----------THPVSCTLLTIAISMKLGLAPFhFWFPEVLQG 121
Cdd:PRK12663 157 LRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIamrlndmgdtaTLTTIALLFLLAFGMKAALFPF-MWLPAAYHT 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 122 SSLMTSLLLATLM-KVPP------TILLLLASPSLNQNLLCALAITSAALGGWMGLNQTQIRKILAFSSISHLGWMTIVI 194
Cdd:PRK12663 236 PNTEVAALFAALLtKVGIyalirvFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGL 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 195 ICNPKLALITFYLYALTT----TAIFFTLNTIN----TSMLSTMMTAWTKIPPLSAILMMTLLSLAGLPPLTGFLPKWMI 266
Cdd:PRK12663 316 ALGTPAGINGAIFYLVHDmvvkTALFLIAGSLVrltgYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLL 395
|
250 260 270
....*....|....*....|....*....|....*
gi 1462331758 267 LQ-ELTKQELTVTATIIA--LLSLLGLFFYLRLAY 298
Cdd:PRK12663 396 VQgALDNGAYILLALMLItsLITMYSLFRIFFLAY 430
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
100-268 |
1.16e-07 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 53.42 E-value: 1.16e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 100 IAISMKLGLapfHFWFPEVLQGSSLMTSLLLATLMKVPPTILLLLASPSLNQNLLCALAIT-----SAALGGWMGLNQTQ 174
Cdd:MTH00032 236 IGKSAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITifgalTAFFAATVGLVQND 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 175 IRKILAFSSISHLGWMTIVIICNPKLALITFYL--YALTTTAIFFTLNTINTSM------LSTMMTAWTKIPPLSAILMM 246
Cdd:MTH00032 313 LKKVIAYSTCSQLGYMVLIIGIEGSHNVGLFHLvnHAFFKALLFLSAGSVIHSTtvdeqdMRKMGGLIHSIPFTYTMMLI 392
|
170 180
....*....|....*....|..
gi 1462331758 247 TLLSLAGLPPLTGFLPKWMILQ 268
Cdd:MTH00032 393 GSFSIMGLPYLTGFYSKDLILE 414
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-340 |
1.20e-07 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 47.64 E-value: 1.20e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 1462331758 291 FFYLRLAYCATITLPPNSANHMKHWQFNKPVNT-LTTIFTMLSIMLLPLSP 340
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTlLLPTLTTLSILLLPLTP 51
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
110-283 |
2.17e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 52.61 E-value: 2.17e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 110 PFHFWFPEVLQGSSLMTSLLLATLMKVPPTILLLLASPSLN-----QNLLCALAITSAALGGWMGLNQTQIRKILAFSSI 184
Cdd:PRK12647 213 PFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGgtplwQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTV 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 185 SHLGWMTIVIICNPKLALITFYLY----ALTTTAIFFTLNTIN----TSMLSTMMTAWTKIPPLSAILMMTLLSLAGLPP 256
Cdd:PRK12647 293 SALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAGIIDhetgTRDITKLGGLRRAMPITAAAALLAALSMAGLPP 372
|
170 180
....*....|....*....|....*..
gi 1462331758 257 LTGFLPKWMILQELTKQELTVTATIIA 283
Cdd:PRK12647 373 LFGFLAKELIYEALLEAPLWSLILTVA 399
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-298 |
3.03e-07 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 51.96 E-value: 3.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 34 EINTLAILPLISKSHHPRAIEASTKYFLVQATASALLLFSSMINAQFTGQWDITQ-----LTHPVSCT------LLTIAI 102
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSPViyggllLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 103 SMKLGLAPFHFWFPEVLQGSSLMTSLLLATLMKVPPTILLL--------LASPSLNQNLLCALAITSAALGGWMGLNQTQ 174
Cdd:PRK06277 210 LYGSGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLvifklfggLSYFPSAQGVLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 175 IRKILAFSSISHLGWMTIVIICNPKLALITFYLYA----LTTTAIFFTLNTI----NTSMLSTMMTAWTKIPPLSAILMM 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAinhvIYKSALFLGAGIVsyrtKTSNLRKLGGLLPVMPVVAFMVLC 369
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1462331758 247 TLLSLAGLPPLTGFLPKWMILQELTKQELTVTATIIALLSLLGLFFYLRLAY 298
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY 421
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
59-291 |
2.14e-06 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 49.34 E-value: 2.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 59 YFLVQATASALLLFSSMINAQF-TGQWDITQLTHP-----VSCTLLTIAISMKLGLAPFHFWFPEVLQG-----SSLMTS 127
Cdd:PRK08667 166 FYFVMTQLSTVFLMLGIIVLFIqTGSFELSPLGASagilsLVFLLLFLGFGIKAGIIPFHKWLPYAHPAspsnvSALMSG 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 128 LLLATLMKVPPTILLLLASPSLNQN-LLCALAITSAALGGWMGLNQTQIRKILAFSSISHLG--------WMTIVIICNP 198
Cdd:PRK08667 246 VMLKVAVYGLVRFLMDVLSPELWWGvLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVYGLD 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 199 KLALITF-------YLYALTTTAIFFTLNTI----NTSMLSTMMTAWTKIPPLSAILMMTLLSLAGLPPLTGFLPKWMIL 267
Cdd:PRK08667 326 TLALLALggalfhsLNHALFKSLLFLTAGSVvhatGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLY 405
|
250 260
....*....|....*....|....*.
gi 1462331758 268 QELTkQELTVTATI--IALLSLLGLF 291
Cdd:PRK08667 406 ESFF-QSFSVADPLikILLFSVLAIF 430
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
98-267 |
2.64e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 48.96 E-value: 2.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 98 LTIAISMKLGLAPFHFWFPEVLQGS-SLMTSLLLATLMKVPPTILLLLASPSLNQNL----------LCALAITSAALGG 166
Cdd:PRK12662 215 IMVGLFIKAALFPFHKWLIQAYSEApSFISVFFSGTSTKVMIYLIIRIVYDVFKANFvfttlpfnnvFMILAALAIVFGS 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 167 WMGLNQTQIRKILAFSSISHLGWMTIVIICNPKLALITFYLY----ALTTTAIFFTLNTI----NTSMLSTMMTAWTKIP 238
Cdd:PRK12662 295 VLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSGSIsyhfGTTKLEDCLNLWKSMP 374
|
170 180
....*....|....*....|....*....
gi 1462331758 239 PLSAILMMTLLSLAGLPPLTGFLPKWMIL 267
Cdd:PRK12662 375 KITLAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-284 |
3.10e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 48.66 E-value: 3.10e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 2 NPQAMLVSTLSLLLGTTIAISSNHWMMaWTGLEINTLAILPLISKSHHPRAIEASTKYF-LVQATASALLLFSSMINAQF 80
Cdd:PRK06589 115 SSRFLFFFNLTILIGVLIALSSDLFTM-FVCYELLTISTAFLIGHTRNNISLSGGYKYLkILMISALLLFLPAVILIYTK 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 81 TGQWDITQLTHPVSCTLLTIAISMKLGLA-----PFHFWFPEVLQGSSLMTSLLLATLM---KVPPTILLLLASPSLNQ- 151
Cdd:PRK06589 194 TGNLDFVSGGLFSKNQSIILLLMFIYGIAktaifPVHSWLPAAMVAHYPVSALLHAVIVvktGLFCIYKILLYIFGLSYl 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 152 -------NLLCALAITSAALGGWMGLNQTQIRKILAFSSISHLGWMTIV--IICNPKLALITFYL--YALTTTAIFFTLN 220
Cdd:PRK06589 274 qrifaefNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSafILTPKALGAAILHLvsHSFAKICLFYSMG 353
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1462331758 221 TINTSM----LSTMMTAWTKIPPLSAILMMTLLSLAGLPPLTGFLPKWMILQELTKQELTVTATIIAL 284
Cdd:PRK06589 354 SIYSLKkedqVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVML 421
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
100-265 |
5.49e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 47.99 E-value: 5.49e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 100 IAISMKLGLAPFHFWFPEVLQGSSLMTSLLLA-TLMKVPPTILLLLASPSL---NQNL---LCALAITSAALGGWMGLNQ 172
Cdd:MTH00226 238 LAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAgILLKLGGYGLVRLSWPILplgAQNLapaVIAMGIVGIVYGSFATCRQ 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 173 TQIRKILAFSSISHLGWMTIVIICNPKLAL---ITFYLYALTTTAIFFTLNTI-----NTSMLSTMMTAWTKIPPLSAIL 244
Cdd:MTH00226 318 IDVKRLVAYSSVAHMGLVSITLVTHDIIGLtgsIFIMLAHGIVSSLLFILVTIlydrhHTRLIKYYRGLSITMPIWGTIM 397
|
170 180
....*....|....*....|.
gi 1462331758 245 MMTLLSLAGLPPLTGFLPKWM 265
Cdd:MTH00226 398 IVTSLANVAVPPSGNFIGEYL 418
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-290 |
5.86e-06 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 47.72 E-value: 5.86e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 55 ASTKYFLVQATASALLLFSSMINAQFTGQ--WDITQLTH---PVSCTLLT-----IAISMKLGLAPFHFWFPEVLQGSSL 124
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAksyPLALELLLyagflIAFGVKLPIFPLHTWLPDAHGEASA 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 125 MTSLLLA-TLMKVPPTILLLLASPSLNQN------LLCALAITSAALGGWMGLNQTQIRKILAFSSISHLGWMTIVIICN 197
Cdd:PRK12561 218 PVSMILAgVLLKMGGYALIRFNVQMLPDAhvyfapALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAF 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 198 PKL----ALITFYLYALTTTAIFF----TLNTINTSMLSTMMTAWTKIPPLSAILMMTLLSLAGLPPLTGFLPKWMILQE 269
Cdd:PRK12561 298 TDLgisgAMLQMISHGLIAAALFFltgvTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVFLG 377
|
250 260
....*....|....*....|...
gi 1462331758 270 LTKQEL--TVTATIIALLSLLGL 290
Cdd:PRK12561 378 ITSSDVysSTFRTITILLAAVGL 400
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
97-268 |
6.80e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 47.66 E-value: 6.80e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 97 LLTIAISMKLGLAPFHFWFPEVL-QGSSLMTSLLLATLMKVP-----PTILLLLASPSLNqNLLCALAITSAALGGWMGL 170
Cdd:PRK12665 214 VLLVAFGIKAAVFPLSFWLPDSYpTAPAPVTAVFAGLLTKVGvyaiiRTHTLLFPGGGLD-TLLMVVALLTMVVGILGAI 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 171 NQTQIRKILAFSSISHLGWMTIVIICNPKLALITFYLYA----LTTTAIFFTLNTINTSMLSTMMT---AWTKIPPLSAI 243
Cdd:PRK12665 293 AQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVahhiTVQTTLFLVVGLIERQAGSSSLRrlgGLAKASPLLAV 372
|
170 180
....*....|....*....|....*.
gi 1462331758 244 L-MMTLLSLAGLPPLTGFLPKWMILQ 268
Cdd:PRK12665 373 LfFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-265 |
1.07e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 47.13 E-value: 1.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 48 HHPRAIEASTKYFLVQATASALLLFSSMINAQFTGQWDITQLTHP--------------VSCTLLTIAISMKLGLAPFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDselienikghplflITLILIFIGAAAKSAQGPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 114 WFPEVLQGSSLMTSLLLATLMKVPPTILLLLASPSLNQN-----LLCALAITSAALGGWMGLNQTQIRKILAFSSISHLG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 189 WMTIV----IICNPKL--ALITFYLYALTT-TAIFFTLNTI-----NTSMLSTMMTAWTKIPPLSAILMMTLLSLAGLPP 256
Cdd:PRK12649 316 YLMTMygytTYHEPGLgvAAATFHLLNHATfKACLFLVAGIvaheaATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
....*....
gi 1462331758 257 LTGFLPKWM 265
Cdd:PRK12649 396 LNGFLSKEM 404
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
97-296 |
8.41e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 44.17 E-value: 8.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 97 LLTIAISMKLGLAPFHFWFPEVLQG---------SSLMTSLLLATLMKVppTILLLLASPSLNQNLLCALAITSAALGGW 167
Cdd:PRK07691 214 LFLFVFATKAGLFPLYFWLPGSYYAppiaiaalfGALLTKVGVYAIART--FTLFFSHDTSFTHYLILILALLTIIFGVI 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 168 MGLNQTQIRKILAFSSISHLGWMTIVIICNPKLALI--TFYL--YALTTTAIFFTLNTI----NTSMLSTMMTAWTKIPP 239
Cdd:PRK07691 292 GAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIgaIYYLihDMIVKAALFLLIGIMikitGTTDLKKMGGLIKRYPV 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1462331758 240 LSAILMMTLLSLAGLPPLTGFLPKWMILQELTKQELTVTATIIALLSLLGLFFYLRL 296
Cdd:PRK07691 372 LGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
96-268 |
1.44e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 43.55 E-value: 1.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 96 TLLTIAISMKLGLAPFHFWFPEVLQGSSLMTSLLLATLMKVPPTILLL------------LASPSLnqnllCALAITSAA 163
Cdd:PRK07363 209 TGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLrfglqlfpqtwsLVAPGL-----AIIGTISVI 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 164 LGGWMGLNQTQIRKILAFSSISHLGWMTIVIICNPKLALITFYLYALT---TTAIFFTL--------NTINTSMLSTMMT 232
Cdd:PRK07363 284 YGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMIShglILALLFHLvgiverkvGTRDLDVLNGLMN 363
|
170 180 190
....*....|....*....|....*....|....*.
gi 1462331758 233 AWTKIPPLSAILMMTLLSLAGLPPLTGFLPKWMILQ 268
Cdd:PRK07363 364 PIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
95-303 |
3.33e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 42.30 E-value: 3.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 95 CTLL---TIAISMKLGLapfHFWFPEVLQGSSLMTSLLLATLMkVPPTILLLLASPSLNQNLLCALAITS------AALG 165
Cdd:MTH00210 214 CLLLfigAVGKSAQLGL---HTWLPDAMEGPTPVSALIHAATM-VTAGVFLIIRSGPLFEGSPLALTIVTilgaltAFFA 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 166 GWMGLNQTQIRKILAFSSISHLGWMtiVIICNpkLALITFYLYALTTTAIFFTL---------NTINTSMLSTMMTAWTK 236
Cdd:MTH00210 290 ATVGVVQNDLKKVIAYSTCSQLGYM--VMVCG--ISNYSTSLFHLMNHAFFKALlflsagsviHAVSDEQDMRKMGGLIK 365
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1462331758 237 IPPLSAILMMT-LLSLAGLPPLTGFLPKWMILqeltkqELTVTATIIALLSLLGLF------FY-LRLAYCATIT 303
Cdd:MTH00210 366 SIPFTYVMILIgSLSLMGFPYLTGFYSKDLIL------ELTYDKYYIAFAYWLGSFsalltaFYsIRLIYLTFIT 434
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
164-286 |
3.35e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 42.48 E-value: 3.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 164 LGGWMGLNQTQIRKILAFSSISHLGWMTIVIICNPKLALItfylyalttTAIFFTLN--TINTSMLstmMTA-------- 233
Cdd:PRK12648 284 LGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSPLAAV---------AAIFHIINhaTFKASLF---MAAgiidhetg 351
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1462331758 234 ----------WTKIPPLSAILMMTLLSLAGLPPLTGFLPKWMILQELTKQE--------LTVTATIIALLS 286
Cdd:PRK12648 352 trdmrrlsglRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMFFAETLDTHllgsldwlLPVAATLAGAFS 422
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
33-291 |
5.27e-04 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 41.50 E-value: 5.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 33 LEINTLAILPLISKSHHPRAIEASTKYFLVQATAS------ALLLFSSMINAQFTGQWDITQLTHPVSCTLLTIAISMKL 106
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSlglylaAATLFLQTGTFALSALSGLHGSLKYLVFLGILFAAWGKS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 107 GLAPFHFWFPEVLQGSSLMTSLLLATLM----------------KVPPTILLLLAspslnqnllcALAITSAALGGWMGL 170
Cdd:PRK06525 222 AQLPFYSWLPDAMEAPTPASAYLHAASMvkvgvyifaraiqsmgPIPHVIGYVGA----------VMAIVTLLYGFLMYL 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 171 NQTQIRKILAFSSISHLGWMTIVI---ICNPKLALI--TFY---------LYALTTTAIFFTLNTINTSMLSTMMtawTK 236
Cdd:PRK06525 292 PQQDMKRLLAYSTITQLGYMFFGLslaILGSRLALEgsIAYifnhafaksLFFLVAGALSYSCGTRLLPRLRGVL---KK 368
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1462331758 237 IPPLSAILMMTLLSLAGLPPLTGFLPKWMILqeLTKQELTVTATIIALLSLLGLF 291
Cdd:PRK06525 369 LPLVGVGFCVAALAITGVPPFNGFFSKFPIF--AAGFELSVEYWILLPAMVLLLI 421
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
21-296 |
7.81e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 40.92 E-value: 7.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 21 ISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLVQATASALLLFSSMINAQFTGQWDITQ----LTHPVSCT 96
Cdd:PRK06591 132 IATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDiaayLQEHTNSR 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 97 LLTIAIS-------MKLGLAPFHFWFPEVLQGSSLMTSLLLA---------TLMKVPPTILLLLASPSLNQNLLCALAIT 160
Cdd:PRK06591 212 IITIAIGffligaiLKTAFFPMHFWMMRAYNNTASVILVYLAgistiigiyIIYKFTYIIIGYETIKTAITNFIRPIALA 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 161 SAALGGWMGLNQTQIRKILAFSSISHLGWMTIVIICNPKLALITFYLYALTttaifftLNTINTSMLSTMMTAWTKiPPL 240
Cdd:PRK06591 292 TLIIAPYFAYQAKNFKNIIIYSCFTQIGYVFLLYVTENGIIILPSLLLADS-------INKIALFLIDAYNESYKR-EPN 363
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1462331758 241 SAILMMTLLSLAGLPPLTGFLPKWMILQELTKQELTVTATIIALLSLLGLFFYLRL 296
Cdd:PRK06591 364 KVLIIIAIICSCGLPISPLFFIKVNILELLLTQNLLLDFIIILLSSVGSLFYHYKM 419
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
7-190 |
9.81e-04 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 40.84 E-value: 9.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 7 LVSTLSLLLGTTIAISSNHW---MMAW--TGLEINTLailpLISKSHHPRAIEASTKYFLVQATASALLLFSSMINAQFT 81
Cdd:PRK08168 103 VRALAGVLAAVHLLVLSDHLlvlIAAWaaISLALHRL----LCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEV 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 82 GQWDITQL--------THP---VSCTLLTIAISMKLGLAPFHFWFPEVLQGSSLMTSLLLATLMKVPPTILL----LLAS 146
Cdd:PRK08168 179 GSLSLSALwahlaaqgASPslqAAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVVNLGGFVLIrfapLLEQ 258
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1462331758 147 PSLNQNLLCALAITSAALGGWMGLNQTQIRKILAFSSISHLGWM 190
Cdd:PRK08168 259 APPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFM 302
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
110-293 |
1.49e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 40.51 E-value: 1.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 110 PFHFWFPEVLQGSSLMTSLLLATLMKVPPTILLLLASPSLNQN-----LLCALAITSAALGGWMGLNQTQIRKILAFSSI 184
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSnmyiyIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 185 SHLGW-MTIV-----IICNPKLALITFY-------LYALTTTAIF------------FTLNTINTSMLSTMmtawTKIPP 239
Cdd:PRK12646 308 SQLGMiMAMVgigggYAQHQQDAIASIYvfvlfaaLFHLMNHAIFkcalfmgvgiidHEAGTRDIRILSGM----RQLFP 383
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1462331758 240 LSAILM-MTLLSLAGLPPLTGFLPKWMILQELTK--------QELTVTATIIALLSLLGLFFY 293
Cdd:PRK12646 384 KMNLVMtIAALSMAGVPFLNGFLSKEMFLDALTQtgqlsqfsLISMIIIVFIGVIASIFTFTY 446
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
82-268 |
1.63e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 40.13 E-value: 1.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 82 GQWDITQLTH----PVSCTLLTIAISMKLGLAPFHFWFPEVLQGSSLMTSLLLATLMKVPPTILLL-----LASPSLNQN 152
Cdd:MTH00207 165 GHWSITNMWQtdmnNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIrfypfLSSTYWFNP 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 153 LLCALAITSAALGGWMGLNQTQIRKILAFSSISHLG-WMTIVIICNPKLALITFYLYALTTTAIFFTLNTI-----NTSM 226
Cdd:MTH00207 245 ALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGvMMASLGLGMPKLALFHLITHALFKALLFVCAGSLihshhHSQD 324
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1462331758 227 LSTMMTAWTKIPPLSAILMMTLLSLAGLPPLTGFLPKWMILQ 268
Cdd:MTH00207 325 LRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILE 366
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
110-267 |
3.09e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 39.24 E-value: 3.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 110 PFHFWFPEVLQGSSLMTSLLLATLMKVPPTILLLLASPSLNQ--NLLCALAIT---SAALGGWMGLNQTQIRKILAFSSI 184
Cdd:PRK07376 245 PLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQfpAVMTVIAWTgaiTAFLGASIALTQNDIKKGLAYSTI 324
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 185 SHLGWMTIVIICNPKLAlitfYLYALTTTAIFFTLNTINT-SMLSTM----------------MTAWTKIPPLSAI-LMM 246
Cdd:PRK07376 325 SQLGYMVMAMGCGAYSA----GLFHLMTHAYFKAMLFLGSgSVIHGMeevvghdpvlaqdmrlMGGLRKYMPITAItFLI 400
|
170 180
....*....|....*....|.
gi 1462331758 247 TLLSLAGLPPLTGFLPKWMIL 267
Cdd:PRK07376 401 GCLAISGIPPFAGFWSKDEIL 421
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
5-296 |
4.97e-03 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 38.59 E-value: 4.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 5 AMLVstLSLLLGTTIAISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLVQATASALLLFSSMINAQFTGQW 84
Cdd:PRK08377 111 AMLF--LLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 85 DITQLTH----------PVSCTLLTIAISMKLGLAPFHFWFPEVLQGS----SLMTSLLL--ATLMKVPPTILLLLASPS 148
Cdd:PRK08377 189 NMAHIAQlagtidptvaQVGLALLIFGLAVEAELFPLNAWAPDAYQAAphpiTVMFSAFVvkAGLYAMARILYLMQNANG 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331758 149 LNQ--NLLCALAITSAALGGWMGLNQTQIRKILAFSSISHLGWMTIVIICNPKL----ALITFYLYALTTTAIFFTLNTI 222
Cdd:PRK08377 269 WSSvlKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAgvdaGVFHMINHAIVKALLFLAVGYV 348
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1462331758 223 NTSMLSTMMTAWT---KIPPLSAI-LMMTLLSLAGLPPLTGFLPKWMILQELTKQELTVTATIIALLSLLGLFFYLRL 296
Cdd:PRK08377 349 GITLGGTEIEKFEglgKRMPLTALaLTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| |
