|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.10e-168 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 472.38 E-value: 2.10e-168
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 1 MNPQAKLIFSMSLLLGTTITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLVQATASTLLLFSSMTNAWF 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 81 TGQWDITQLTHPVSCMLLTTAISMKLGLVPFHFWFPEVLQGSPLMTSLLLATVMKFPPTILLLLTSPSLNPTMLFMMAIA 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 161 SAALGGWMGLNQTQIRKIMAFSSISHLGWMTVILVYNPKLTLVTFYLYSLTTAAIFFTLHSNNTLKLSTLMTAWSKIPTL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 241 NATLMITLLSLAGLPPLTGFLPKWLILQELTKQELTTTATIIALLSLLGLFFYLRLAYCATITLPPNSANHMKQWQTNKS 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 1477052442 321 VKTLTSIFSVLSIMLMPLS*TILTIP 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
5.77e-139 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 398.02 E-value: 5.77e-139
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 1 MNPQAKLIFSMSLLLGTTITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLVQATASTLLLFSSMTNAWF 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 81 TGQWDITQLTHPVSCMLLTTAISMKLGLVPFHFWFPEVLQGSPLMTSLLLATVMKFPPTILLLLTSPSlNPTMLFMMAIA 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 161 SAALGGWMGLNQTQIRKIMAFSSISHLGWMTVILVYNPKLTLVTFYLYSLTTAAIFFTLHSNNTLKLSTLMTAWSKIPTL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 241 NATLMITLLSLAGLPPLTGFLPKWLILQELTKQELTTTATIIALLSLLGLFFYLRLAYCATITLPPNSANHMKQWQTNKS 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*.
gi 1477052442 321 VKTLT-SIFSVLSIMLMPLS*TILTI 345
Cdd:MTH00135 320 QLTLPlAISTTATLMLLPLTPAILAL 345
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
2.33e-135 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 388.90 E-value: 2.33e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 1 MNPQAKLIFSMSLLLGTTITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLVQATASTLLLFSSMTNAWF 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 81 TGQWDITQLTHPVSCMLLTTAISMKLGLVPFHFWFPEVLQGSPLMTSLLLATVMKFPPTILLLLTSPSLNPTMLFMMAIA 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 161 SAALGGWMGLNQTQIRKIMAFSSISHLGWMTVILVYNPKLTLVTFYLYSLTTAAIFFTLHSNNTLKLSTLMTAWSKIPTL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 241 NATLMITLLSLAGLPPLTGFLPKWLILQELTKQELTTTATIIALLSLLGLFFYLRLAYCATITLPPNSANHMKQWQTNKS 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*
gi 1477052442 321 VKTLTSIFSVLSIMLMPLS*TILTI 345
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNL 345
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
1.80e-118 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 346.06 E-value: 1.80e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 1 MNPQAKLIFSMSLLLGTTITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLVQATASTLLLFSSMTNAWF 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 81 TGQWDITQLTHPVSCMLLTTAISMKLGLVPFHFWFPEVLQGSPLMTSLLLATVMKFPPTILLLLTSPSLNPTMLFMMAIA 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 161 SAALGGWMGLNQTQIRKIMAFSSISHLGWMTVILVYNPKLTLVTFYLYSLTTAAIFFTLHSNNTLKLSTLMTAWSKIPTL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 241 NATLMITLLSLAGLPPLTGFLPKWLILQELTKQELTTTATIIALLSLLGLFFYLRLAYCATITLPPNSANHMKQWQ-TNK 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQfENT 320
|
330 340
....*....|....*....|....*.
gi 1477052442 320 SVKTLTSIFSVLSIMLMPLS*TILTI 345
Cdd:MTH00105 321 KPMTLLPTLIILSTMLLPLTPMLSIL 346
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
6.81e-98 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 293.41 E-value: 6.81e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 1 MNPQAKLIFSMSLLLGTTITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLVQATASTLLLFSSMTNAWF 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 81 TGQWDITQLTHPVSCMLLTTAISMKLGLVPFHFWFPEVLQGSPLMTSLLLATVMKFPPTILLLLTSPSLNPTMLFMMAIA 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 161 SAALGGWMGLNQTQIRKIMAFSSISHLGWMTVILVYNPKLTLVTFYLYSLTTAAIFFTLHSNNTLKLSTLMTAWSKIPTL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 241 NATLMITLLSLAGLPPLTGFLPKWLILQELTKQELTTTATIIALLSLLGLFFYLRLAYCATITLPPNSANHMKQWQTNKS 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 1477052442 321 VKTLTSIFSVLSIMLMPLS*TILTIP 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-336 |
7.78e-90 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 272.96 E-value: 7.78e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 1 MNPQAKLIFSMSLLLGTTITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLVQATASTLLLFSSMTNAWF 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 81 TGQWDITQLTHPVSCMLLTTAISMKLGLVPFHFWFPEVLQGSPLMTSLLLATVMKFPPTILLLLTSPSLNPTMLFMMAIA 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 161 SAALGGWMGLNQTQIRKIMAFSSISHLGWMTVILVYNPKLTLVTFYLYSLTTAAIFFTLHSNNTLKLSTLMTAWSKIPTL 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 241 NATLMITLLSLAGLPPLTGFLPKWLILQELTKQELTTTATIIALLSLLGLFFYLRLAYCATITLPPNSANHMKQWQTNKS 320
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGN 320
|
330
....*....|....*.
gi 1477052442 321 VKTLTSIFSVLSIMLM 336
Cdd:MTH00041 321 ITVYGVILSILSSISI 336
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
7.50e-62 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 200.82 E-value: 7.50e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 1 MNPQAKLIFSMSLLLGTTITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLVQATASTLLLFSSMTNAWF 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 81 TGqwditqLTHPVSCMLLTTAISMKLGLVPFHFWFPEVLQGSPLMTSLLLATVMKFPPTILLLLTspsLNPTMLFMMAIA 160
Cdd:MTH00160 82 LM------LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 161 SAALGGWMGLNQTQIRKIMAFSSISHLGWMTVILVYNPKLTLVTFYLYSLTTAAIFFTLHSNNTLKLSTLMTAWSKIPTL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 241 NATLMITLLSLAGLPPLTGFLPKWLILQELTKQELTTTATIIALLSLLGLFFYLRLAYCAtITLPPNSANHMKQWQTNKS 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSS-LMLNYNKNKWNLKKKKNKF 311
|
330 340
....*....|....*....|....*
gi 1477052442 321 VKTLtSIFSVLSIMLMPLS*TILTI 345
Cdd:MTH00160 312 SLIL-NFLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
5-343 |
1.36e-53 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 178.93 E-value: 1.36e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 5 AKLIFSMSLLLGTTITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLVQATASTLLLFSSMTNAWFTGQW 84
Cdd:MTH00144 5 SNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 85 DITqlthpvscMLLTTAISMKLGLVPFHFWFPEVLQGSPLMTSLLLATVMKFPPTILLLLTSPSLNP-TMLFMMAIASAA 163
Cdd:MTH00144 85 FSM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVISVLSAL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 164 LGGWMGLNQTQIRKIMAFSSISHLGWMTVILVYNPKLTLVTFYLYSLTTAAIFFTLHSNNTLKLSTlMTAWSKIPTLNAT 243
Cdd:MTH00144 157 VGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKD-LGSLKPSYKTGLS 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 244 LMITLLSLAGLPPLTGFLPKWLILQELTKQELTTTATIIALLSLLGLFFYLRLAYCATITLppnsanhmkqwqtNKSVKT 323
Cdd:MTH00144 236 IISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSS-------------SKSKKS 302
|
330 340
....*....|....*....|
gi 1477052442 324 LTSIFSVLSIMLMPLS*TIL 343
Cdd:MTH00144 303 NSSKVLNSSIISLNLLGGLL 322
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
7-337 |
4.97e-47 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 162.26 E-value: 4.97e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 7 LIFSMSLLLGTTITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLVQATASTLLLFSSmtnawfTGQWDI 86
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 87 TQLTHPVSCMLLTTAISMKLGLVPFHFWFPEVLQGSPLMTSLLLATVMKFPPTILLLLTSPSLNPTMLFMMAIASAALGG 166
Cdd:MTH00011 83 PSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 167 WMGLNQTQIRKIMAFSSISHLGWMTVILVYNPKLTLVTFYLYSLTTAAIFFTLHSNNTLKLSTLMTAWSKIPTLNATLMI 246
Cdd:MTH00011 163 LGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFI 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 247 TLLSLAGLPPLTGFLPKWLILQELTKQELTTTATIIALLSLLGLFFYLRLAYcATITLPPNSANhMKQWQTNKSVKTLTS 326
Cdd:MTH00011 243 MLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSS-LKSAPYEPKTKILIS 320
|
330
....*....|.
gi 1477052442 327 IFSvLSIMLMP 337
Cdd:MTH00011 321 MCT-LSLGLIP 330
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
8-298 |
1.10e-42 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 150.59 E-value: 1.10e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 8 IFSMSLLLGTTITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLVQATASTLLLFSSMtnAWFTGQWdit 87
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGS--LSFSNLY--- 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 88 qlTHPVSCMLLTTAISMKLGLVPFHFWFPEVLQGSPLMTSLLLATVMKFPPtiLLLLTSPSLNPTMLFMMAIASAALGGW 167
Cdd:MTH00197 77 --LSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGGI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 168 MGLNQTQIRKIMAFSSISHLGWMTVILVYNPKLTLVTFYLYSLTTAAIFFTLHSNNTLKLSTLMTAWSKIPTLNATLMIT 247
Cdd:MTH00197 153 GGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLS 232
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1477052442 248 LLSLAGLPPLTGFLPKWLILQELTKQELTTTATIIALLSLLGLFFYLRLAY 298
Cdd:MTH00197 233 FLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAY 283
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-298 |
8.61e-38 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 140.64 E-value: 8.61e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 14 LLGTTITISSNHWMMAWTGLEINTLAILPLIS-KSHHPRAIEASTKYFLVQATASTLLLF-SSMTNAwFTGQWDITQLTH 91
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYG-ATGSLNLAGIAA 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 92 PVS------------CMLLTTAISMKLGLVPFHFWFPEVLQGSPLMTSLLLATVMK---FPPTILLLLTS-PSLNP---T 152
Cdd:COG1007 191 ALAagganspllllgLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAALLRLLVEAfPGLAAdwqL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 153 MLFMMAIASAALGGWMGLNQTQIRKIMAFSSISHLGWMTVILVYNPKLTL--VTFYL--YSLTTAAIFFTL-----HSNN 223
Cdd:COG1007 271 LLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNLGAFAVIlllsrKGGE 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1477052442 224 TLKLSTLMTAWSKIPTLNATLMITLLSLAGLPPLTGFLPKWLILQELTKQELTTTATIIALLSLLGLFFYLRLAY 298
Cdd:COG1007 351 AEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVK 425
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
9.22e-34 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 129.56 E-value: 9.22e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 14 LLGTTITISSNHWMMAWTGLEINTLAILPLIS-KSHHPRAIEASTKYFLVQATASTLLLFSSMTNAWFTGQWDITQLTHP 92
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 93 VS------------CMLLTTAISMKLGLVPFHFWFPEVLQGSPLMTSLLLATVMK---FPPTI-LLLLTSPSLNPT---M 153
Cdd:PRK05777 193 LAdgsgnsllllfgLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAVLLrLLVVAFGGLSEDwqqV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 154 LFMMAIASAALGGWMGLNQTQIRKIMAFSSISHLGWMTVILVYNPKLTLVT--FYL--YSLTTAAIF-FTLHSNNTLKLS 228
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAvlFYLlaYLFMTLGAFgVISLLRRKGGEA 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1477052442 229 TLMTAWSKI----PTLNATLMITLLSLAGLPPLTGFLPKWLILQELTKQELTTTATIIALLSLLGLFFYLRL 296
Cdd:PRK05777 353 ESISDFAGLskrsPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
3.50e-32 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 123.60 E-value: 3.50e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 13 LLLGTTITISSNHWMMAWTGLEINTLAILPLI-SKSHHPRAIEASTKYFLVQATASTLLLFS-------------SMTNA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 79 WFTGQWDITQLTHPVSCMLLTTAISMKLGLVPFHFWFPEVLQGSPLMTSLLLATVMKFppTILLLLTSPSLNPTMLFMMA 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKL--GIFSILVSIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 159 IASAALGGWMGLNQTQIRKIMAFSSISHLGWMTVILVYNP----KLTLVTFYLYSLTTAAIFFTLHSNNTLK--LSTLMT 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFSIILALNVYKnlIIEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1477052442 233 AWSKIPTLNATLMITLLSLAGLPPLTGFLPKWLILQELTKQELTTTATIIALLSLLGLFFYLRL 296
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
1.73e-29 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 114.72 E-value: 1.73e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 23 SNHWMMAWTGLEINTLAILPLI-SKSHHPRAIEASTKYFLVQATASTLLLFSSMTNAWFTGQWDITQLTHPVSCM----- 96
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGlnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 97 ------LLTTAISMKLGLVPFHFWFPEVLQGSPLMTSLLLATVMKFPPTILLLLTSPSLNPT------MLFMMAIASAAL 164
Cdd:pfam00361 81 llllflLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSspfiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 165 GGWMGLNQTQIRKIMAFSSISHLGWMTVIL----VYNPKLTLVTFYLYSLTTAAIF-----FTLHSNNTLKLSTLMTAWS 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFlcagsVIYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 1477052442 236 KIPTLNATLMITLLSLAGLPPLTGFLPKWLILQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-297 |
9.96e-29 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 115.43 E-value: 9.96e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 14 LLGTTITISSNHWMMAWTGLEINTLAILPLIS-KSHHPRAIEASTKYFLVQATASTLLLFSSMTNAWFTGQWDITQLTHP 92
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 93 VSC------------MLLTTAISMKLGLVPFHFWFPEVLQGSPLMTSLLLATVMKFPPTILLLLTSPSL-------NPTM 153
Cdd:TIGR01770 192 LSNgmlnisllllgiVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIlfgfseaWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 154 LFMMAIASAALGGWMGLNQTQIRKIMAFSSISHLGWMTVILVYNPKLTL--VTFYL--YSLTTAAIFFTLHS------NN 223
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkaVLFYIfiYALMSLGAFGVLSLlrsykdEW 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1477052442 224 TLKLSTLMTAWSKIPTLNATLMITLLSLAGLPPLTGFLPKWLILQELTKQELTTTATIIALLSLLGLFFYLRLA 297
Cdd:TIGR01770 352 IEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
7.90e-27 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 110.11 E-value: 7.90e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 13 LLLGTTITISSNHWMMAWTGLEINTLAILPLIS-KSHHPRAIEASTKYFLVQATASTLLLFSSMTNAWFTGQWDI----T 87
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 88 QLTHPVSCMLLTTAISMKLGLVPFHFWFPEVLQGSPLMTSLLLATVMKFPPTILLLLTSPSLNptMLFMMAIASAALGGW 167
Cdd:MTH00199 186 ILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTN--VVLICAVLSIIYGAI 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 168 MGLNQTQIRKIMAFSSISHLGWMTVILVYNP----KLTLVTFYLYSLTTAAIFFTLHSNNTLK--LSTLMTAWSKIPTLN 241
Cdd:MTH00199 264 GALNQTKIKRLLAYSGIGHMGFILFGVAIGSfesiQASLIYMIIYVIMSICSFSIILSLKLTKglIVEVSGLSRKNPVIA 343
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1477052442 242 ATLMITLLSLAGLPPLTGFLPKWLILQELTKQELTTTATIIALLSLLGLFFYLRL 296
Cdd:MTH00199 344 LTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-296 |
1.83e-24 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 102.92 E-value: 1.83e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 13 LLLGTTITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLVQATASTLLLFSSMTNAWFTGQWDITQLTHP 92
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAR 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 93 VS----------CMLLTTAISMKLGLVPFHFWFPEVLQGSPLMTSLLLATVMKFPP------TILLLLTSPSLNPTMLFM 156
Cdd:COG0651 196 LAeldpglllaaFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGvyailrVLTLLFGADPALFLGTLL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 157 MAIA--SAALGGWMGLNQTQIRKIMAFSSISHLGWMTVILVYNPKLTLVTFYLY----SLTTAAIFFT----LHSNNTLK 226
Cdd:COG0651 276 LVLGllTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHllnhALAKALLFLAagaiERATGTRD 355
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 227 LSTLMTAWSKIPTLNATLMITLLSLAGLPPLTGFLPKWLILQELTKQELTTTATIIALLSLLGLFFYLRL 296
Cdd:COG0651 356 LDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-296 |
4.78e-23 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 99.93 E-value: 4.78e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 15 LGTTITISSNHWMMAWTGLEINTLAILPLISKSHHPRAI---------EASTKYFLVQATASTLLLFSSMTNAWFTGQ-- 83
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNeg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 84 ------------WDITQLTHPVSCMLLTTAISMKLGLVPFHFWFPEVLQGSPLMTSLLLATVMKFppTILLLLTSPSLNP 151
Cdd:MTH00198 279 mlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 152 TMLFMMAIASAALGGWMGLNQTQIRKIMAFSSISHLGWMTVIL---VYNPKLTLVTFYLYSLTTAAIFFTL--------- 219
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVsagTYESLQASWTYAVTYLVSALASFTVictleefgt 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 220 -------------HSNNTLKLSTLMTAWSKIPTLNATLMITLLSLAGLPPLTGFLPKWLILQELTKQELTTTATIIALLS 286
Cdd:MTH00198 437 rtptsrqrdgsfgNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIYYLVA 516
|
330
....*....|....*..
gi 1477052442 287 LLGL-------FFYLRL 296
Cdd:MTH00198 517 LFAIictcisaFYYIRI 533
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-311 |
1.05e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 71.83 E-value: 1.05e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 33 LEINTLAILPLISKSHHPRAIEASTKYFLVQATASTLLLFS-SMTNAwFTGQWDITQLT------HPVSCM--LLTTAIS 103
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGvGLLYG-VTGTLNMADLAgalaenPTVVTAfgFVLLALA 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 104 MKLGLVPFHFWFPEVLQG-SPLMTSLLLATVMKFP-----------PTILLLLTSPSLNPTMLFmmAIASAALGGWMGLN 171
Cdd:PRK08375 214 LKAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAvyaliriyftvFGGDFRFALGLGWLLAVL--ALLSMLVGSLAALG 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 172 QTQIRKIMAFSSISHLGWMTVILVYNPKLTLV--TFYLYS---------LTTAAIFFTLHSNNTLKLSTLMtawSKIPTL 240
Cdd:PRK08375 292 QDDVKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLLHhalmkgalfLAAGAIEVTYGTRRLSELSGLG---RRMPLT 368
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1477052442 241 NATLMITLLSLAGLPPLTGFLPKWLILQELTKQELTTTATIIALLSLLGLFFYLRLAYCATITLPPNSANH 311
Cdd:PRK08375 369 AAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPPGSEA 439
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
4.02e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 70.13 E-value: 4.02e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 33 LEINTLAILPLIS-KSHHPRAIEASTKYFLVQATASTLLLFSSmtnAWFTGQWDI-------------TQLTHPVSCMLL 98
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGI---ALLYGQYGTlnmaylavkmsenPTVVAKIALALF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 99 TTAISMKLGLVPFHFWFPEVLQGSPLMTS--LLLATVMKFPPT--ILLLLTSPSLNPT----MLFMMAIASAALGGWMGL 170
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYPAAPSSISamLLVIKQAGLYALarVLFSIYGPAINLAtvgwVIIILGCLTMFVGVAMAV 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 171 NQTQIRKIMAFSSISHLGWMTV-----ILVY-NPKLTLVTFY-----------------LYSLTTAAIFFTLHSNNTLKL 227
Cdd:PRK08376 307 VQKDVKRLLAYHSVSQIGYMLLglgvgLAALgDPAMASYGEIalaggiyhivnhalykaLLFLTAGAVIYETGTRNLNEL 386
|
250 260 270
....*....|....*....|....*....|....*....
gi 1477052442 228 STLMtawSKIPTLNATLMITLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 387 GGLA---RTMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-345 |
5.75e-13 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 69.65 E-value: 5.75e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 51 RAIEASTKYFLVQATASTLLL--FSsmtnaWFTGQ-------WDI------TQLTHPVSC----MLLTTAISMKLGLVPF 111
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVygFS-----WLYGLsggeielQEIvnglinTQMYNSPGIsialIFITVGIGFKLSLAPF 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 112 HFWFPEVLQGSPLMTSLLLATVMKFPPTILL-----LLTSPSLNPTMLFM--MAIASAALGGWMGLNQTQIRKIMAFSSI 184
Cdd:CHL00049 234 HQWTPDVYEGSPTPVVAFLSVTSKVAASALAtrifdIPFYFSSNEWHLLLeiLAILSMILGNLIAITQTSMKRMLAYSSI 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 185 SHLGWMTV-ILVYNPK------LTLVTFYLY-SLTTAA--IFFTLH--SNNTLKLSTLMTawsKIPTLNATLMITLLSLA 252
Cdd:CHL00049 314 GQIGYVIIgIIVGDSNdgyasmITYMLFYIFmNLGTFAciVLFGLRtgTDNIRDYAGLYT---KDPFLALSLALCLLSLG 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 253 GLPPLTGFLPKWLILQELTKQELTTTATIIALLSLLGLFFYLRLAYCATITLPPNSANHMKqwqtNKSVKTLTSIFSV-L 331
Cdd:CHL00049 391 GIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKIIKLLMTGRNQEITPYVR----NYRRSPLRSNNSIeL 466
|
330
....*....|....
gi 1477052442 332 SIMLMPLS*TILTI 345
Cdd:CHL00049 467 SMIVCVIASTIPGI 480
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
8-298 |
7.33e-13 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 69.41 E-value: 7.33e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 8 IFSMSLLlgttitISSNHWMMAWTGLEINTLAILPLISKSHH-PRAIEASTKYFLVQATASTLLLFSSMTNAWFTGQWDI 86
Cdd:COG1009 121 MAAMLGL------VLSDNLLLLFVFWELVGLCSYLLIGFWYEkPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNF 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 87 TQL----THPVSCMLLTTAISM-------KLGLVPFHFWFPEVLQGsPLMTSLLL--ATVMK---FpptiLLLLTSP--S 148
Cdd:COG1009 195 SELlaaaPTILSSPLLTLILLLlllgafgKSAQFPLHFWLPDAMEG-PTPVSALLhaATMVKagvY----LLARLSPlfA 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 149 LNPTMLFMMAI---ASAALGGWMGLNQTQIRKIMAFSSISHLGWMTVILVYnpkltlvtfylySLTTAAIFFTL------ 219
Cdd:COG1009 270 LSPVWLTVVAIigaITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGV------------GAYVAALFHLLthaffk 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 220 --------------HSNNTLKLSTLmtaWSKIPTLNATLMITLLSLAGLPPLTGFLPKWLILQE-LTKQELTTTATIIAL 284
Cdd:COG1009 338 allflgagsvihatGTRDIRKMGGL---RKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAaLEAGGLGPLLLAVAL 414
|
330
....*....|....*
gi 1477052442 285 L-SLLGLFFYLRLAY 298
Cdd:COG1009 415 LgAFLTAFYSFRLFF 429
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
2.42e-12 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 67.77 E-value: 2.42e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 50 PRAIEASTKYFLVQATASTLLLF-SSMTNAWFTGQwdiTQLTH-------------PVSCMLLTTAISMKLGLVPFHFWF 115
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGS---TQLSAialalitspslglALALVFVIAGIAFKISAVPFHQWT 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 116 PEVLQGSPLMTSLLLATVMK---FPPTILLLLTS-PSLNP---TMLFMMAIASAALGGWMGLNQTQIRKIMAFSSISHLG 188
Cdd:PRK02504 234 PDVYEGSPTPVVAFLSVGSKaagFALAIRLLVTAfPSFDEqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAG 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 189 WMTVILVYNPKLTLVTFYLYSLT---------TAAIFFTLHSnNTLKLSTLMTAWSKIPTLNATLMITLLSLAGLPPLTG 259
Cdd:PRK02504 314 FVMIGLVAGTEAGYASMVFYLLAylfmnlgafACVILFSLRT-GTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAG 392
|
....
gi 1477052442 260 FLPK 263
Cdd:PRK02504 393 FFGK 396
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-292 |
1.22e-11 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 65.49 E-value: 1.22e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 49 HPRAIEASTKYFLVQATASTLLLFSSMTNAWFTGQW--DITQLT-HPVS---------CMLLTTAIsmKLGLVPFHFWFP 116
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAaAPLPltaqlllflAFFIAFAV--KVPMFPFHTWLP 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 117 EVLQGSPLMTSLLLATVMK-----------FPptiLLLLTSPSLNPTMLFMmAIASAALGGWMGLNQTQIRKIMAFSSIS 185
Cdd:COG1008 234 DAHVEAPTAGSVLLAGVLLkmggygllrfaLP---LFPEASAYFAPLLAAL-GVIGIIYGALVALAQTDLKRLIAYSSVS 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 186 HLGWMTV-ILVYNPK-LTLVTFYLYS--LTTAAIFFTL----HSNNTLKLSTLMTAWSKIPTLNATLMITLLSLAGLPPL 257
Cdd:COG1008 310 HMGFVLLgIFALNPLgLQGAVLQMVShgLITAALFLLVgvlyDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGT 389
|
250 260 270
....*....|....*....|....*....|....*
gi 1477052442 258 TGFLPKWLILQELTKqelttTATIIALLSLLGLFF 292
Cdd:COG1008 390 SGFVGEFLVLLGAFQ-----VNPWLAILAALGLIL 419
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-292 |
4.66e-11 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 63.81 E-value: 4.66e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 50 PRAIEASTKYFLVQATASTLLLFSSMTNAWFTGQ-WDITQL-THPVSCMLLT-------TAISMKLGLVPFHFWFPEVLQ 120
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGtFDLLELlNLPLPFGVQTwlflaffIAFAVKVPLFPLHTWLPDAHV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 121 GSPLMTSLLLATVMKFPPTILLLLTSPSLNP-------TMLFMMAIASAALGGWMGLNQTQIRKIMAFSSISHLGWMTV- 192
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdaslyfaPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLg 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 193 ILVYNPKLTL-VTFYLYS--LTTAAIFF---TLHSN-NTLKLSTLMTAWSKIPTLNATLMITLLSLAGLPPLTGFLPKWL 265
Cdd:TIGR01972 312 IFSFNELGISgAVFQMIShgLITAALFLlvgVLYERaHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFL 391
|
250 260
....*....|....*....|....*..
gi 1477052442 266 ILQELTKqelttTATIIALLSLLGLFF 292
Cdd:TIGR01972 392 ILLGSFK-----VNPVVAFLAALGIVL 413
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
2-298 |
8.38e-11 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 63.09 E-value: 8.38e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 2 NPQAKLIFSMSLLLGTTITISSNHWMMAWTGLEINTLAILPLISKSHHpRAIEASTKYFLVQATASTLLLFSSMTNAWFT 81
Cdd:PRK08668 96 NDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKT 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 82 GQWDIT-------QLTHPVSCMLLTTAIS----MKLGLVPFHFWFPEVLQGSPL------------MTSLLLATVMKFPP 138
Cdd:PRK08668 175 GTFDFAdisqgliNDTSTGFALIVFLFLLafgvAKAGIFPLHVWAPDAYSEAPQsfsavlsgqlskLGAYGFLLVLYVLP 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 139 TILLLLTSPSLNPTMLFMMAIA-----SAALGGWMGLNQTQIRKIMAFSSISHLGWMTVIL--------------VYNPK 199
Cdd:PRK08668 255 GTKLFSEFGTYRGVPLFNYILAwlgniSIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLglgtslgfagglfhVFNHA 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 200 LTLVTFYLyslTTAAIfftLHSNNTLKLSTLMTAWSKIPTLNATLMITLLSLAGLPPLTGFLPKWLILQELTKQELTTTA 279
Cdd:PRK08668 335 LFKGLFFL---IFAAV---IYRTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITA 408
|
330
....*....|....*....
gi 1477052442 280 TIIALLSLLGLFFYLRLAY 298
Cdd:PRK08668 409 FMAFFGSIGSFLYVFRPLA 427
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
29-304 |
3.47e-10 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 61.21 E-value: 3.47e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 29 AWtglEINTLAILPLISKSHhPRAIEASTKYFLVQATASTLLLFSSMTNAWFTGQWDITQLTHP-----------VSCML 97
Cdd:PRK12650 138 AW---ELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSdvwaekpglttVVAVL 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 98 LTTAISMKLGLVPFHFWFPEVLQGSPLMTSLLLATVMKFPPTILLLLTSPSLNPTM-----LFMMAIASAALGGWMGLNQ 172
Cdd:PRK12650 214 IAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAvwnwlLIIVGMITALMGAVFAVQK 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 173 TQIRKIMAFSSISHLGWM-TVILVYNP-KLT--LVTFYLYSLTTAAIFFTL----HSNNTLKLSTLMTAWSKIPTLNATL 244
Cdd:PRK12650 294 TDLKKLTAYSTVSQLGWIvATIGVGTPfALTaaVVHTLAHALFKSSLFMLIgvvdHQAGTRDIRRLGSLWRRMPFTFVSV 373
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 245 MITLLSLAGLPPLTGFLPKWLILQELTKQELtTTATIIALLSLLGLFFYLRLAYCATITL 304
Cdd:PRK12650 374 TIAALSMAAVPPLFGFVSKEGMLTAFLEAPG-GNAGVVLLLVGAALGAVFTFAYSARLVL 432
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
7-288 |
8.23e-10 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 59.94 E-value: 8.23e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 7 LIFSMSLllgttiTISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLV------QATASTLLLFSSMTnawf 80
Cdd:PRK06458 117 FLFTMLL------ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIIcsvgvaFALFGTILVYANAA---- 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 81 tgqwdiTQLTHPVSCMLLTTAISM----------------------KLGLVPFHFWFPEVLQGSPLMTSLLLA------- 131
Cdd:PRK06458 187 ------TVMGDGEMAILWTELLKHaslldptlmklafvflligfgtKVGLFPMHAWLPDAHSEAPSPVSALLSgvllnva 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 132 --TVMKFppTILLLLTSPSLNPTMLFM-MAIASAALGGWMGLNQTQIRKIMAFSSISHLGWMTVILVYNPKL----TLVT 204
Cdd:PRK06458 261 lyAVLRY--YILIDAAIGSDFPGRLLLiFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLgifaALLH 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 205 FYLYSLTTAAIFFT----LHSNNTLKLSTLMTAWSKIPTLNATLMITLLSLAGLPPLTGFLPKWLILQElTKQELTTTAT 280
Cdd:PRK06458 339 MLNHSLTKSAIFFAsgnvLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTA-GLARGPLLIA 417
|
....*...
gi 1477052442 281 IIALLSLL 288
Cdd:PRK06458 418 ILLLLLLT 425
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
97-284 |
5.17e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 57.63 E-value: 5.17e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 97 LLTTAISmKLGLVPFHFWFPEVLQGSPLMTSLLLATVM---------KFPPTillLLTSPSLNPTMLFMmAIASAALGGW 167
Cdd:PRK12644 209 ILVGALS-KSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPG---FADVPVWRPTVLVL-GLATMLLGGW 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 168 MGLNQTQIRKIMAFSSISHLGWMTVILVYNPK------LTLVTfyLYSLTTAAIFFTL----HSNNTLKLSTLMTAWSKI 237
Cdd:PRK12644 284 RALRQHDLKLILAYGTVSQLGFLTVLVGIGTRdaalagLAMLL--AHALFKAALFLVVgiidHSTGTRDIRKLSGLGRRQ 361
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1477052442 238 PTLNATLMITLLSLAGLPPLTGFLPKWLILQELTKQELTTTATIIAL 284
Cdd:PRK12644 362 PVLAVVAALAAASMAGLPPLLGFVAKEAALEAVLHDGALGPAGPVVL 408
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
109-289 |
7.41e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 57.24 E-value: 7.41e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 109 VPFHFWFPEVLQG-SPLMTSLLLATVMKfPPTILLLLTSPSLNPTMLFMMAIASAA-----LGGWMGLNQTQIRKIMAFS 182
Cdd:PRK12647 212 FPFHFWLPNAMEApTPVSAYLHSATMVK-AGIYLLARLNPVLGGTPLWQTILPLFGgltmlTGALLAVRQTDLKLILAYS 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 183 SISHLGWMTVILVYNPKLTLVTFYLY----SLTTAAIFFTL----HSNNTLKLSTLMTAWSKIPTLNATLMITLLSLAGL 254
Cdd:PRK12647 291 TVSALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAgiidHETGTRDITKLGGLRRAMPITAAAALLAALSMAGL 370
|
170 180 190
....*....|....*....|....*....|....*
gi 1477052442 255 PPLTGFLPKWLILQELTkqELTTTATIIALLSLLG 289
Cdd:PRK12647 371 PPLFGFLAKELIYEALL--EAPLWSLILTVAAVLG 403
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-296 |
2.62e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 55.13 E-value: 2.62e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 33 LEINTLAILPLISKSHHPRAIEASTKYFLVQATASTLLLFS-----------SMTNAWFTGQWDITQLTHPVSCMLLTTA 101
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGigflyaitgtlNMGDMFLIIQDLPTNRAIQIGVLFIMVG 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 102 ISMKLGLVPFHFWFPEVLQGSPLMTSLLLA-TVMKFPPTIL-----------LLLTSPSLNpTMLFMMAIASAALGGWMG 169
Cdd:PRK12662 219 LFIKAALFPFHKWLIQAYSEAPSFISVFFSgTSTKVMIYLIirivydvfkanFVFTTLPFN-NVFMILAALAIVFGSVLA 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 170 LNQTQIRKIMAFSSISHLGWMTVILVYNPKLTLVTFYLY----SLTTAAIFFTL----HSNNTLKLSTLMTAWSKIPTLN 241
Cdd:PRK12662 298 ILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSgsisYHFGTTKLEDCLNLWKSMPKIT 377
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1477052442 242 ATLMITLLSLAGLPPLTGFLPKWLILQELTKQELTTTATIIALLSLLGLFFYLRL 296
Cdd:PRK12662 378 LAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKI 432
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
1.00e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 53.42 E-value: 1.00e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 33 LEINTLAILPLISKSHHPRAIEASTKYFLVQATASTLLLFSSMTNAWFTGQWDITQLTH--PVSCMLLTTAISMKLGLVP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 111 FHFWFPEVLQGSPLMTSLLLA-TVMK---FPPTILLLLTSPSLNPTMLFmmAIASAALGGWMGLNQTQIRKIMAFSSISH 186
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSgVVVKagvFPLVRCALDVPGLDLIVRIF--GVGTALLGVLFALLEKDLKRMLAFSTISQ 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 187 LGWMTVILVYNPKLTLVtfylYSLTTAAIFF---TLHSNNTLKLSTLMTA-WSKIPtlnatLMITLLSLAGLPPLTGFLP 262
Cdd:PRK07234 281 LGFILAAPLVGGLYALA----HGLVKSTLFLcagALPSRNFTELISQMLGiGKWIP-----LTMASFSIAGFPLLAGFVS 351
|
....*....
gi 1477052442 263 KWLILQELT 271
Cdd:PRK07234 352 KVLTLKNLL 360
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-298 |
1.27e-07 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 53.16 E-value: 1.27e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 95 CMLLTTAISMKLGLVPFHFWFPEVLQGSPLMTSLLLATVMKFPPTILLLLTSP--SLNPTMLFMMAIA---SAALGGWMG 169
Cdd:MTH00020 213 CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPlfEQAPLALIIVTIVgslTVFFAATVG 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 170 LNQTQIRKIMAFSSISHLGWMTVILvynpKLTLVTFYLYSLTTAAIFFTL---------HSNNTLKLSTLMTAWSK-IPT 239
Cdd:MTH00020 293 LVQNDLKKVIAYSTCSQLGYMVVAC----GLSHYSISLFHLMNHAFFKALlflsagsviHALSDEQDMRKMGGLISfLPL 368
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 240 LNATLMITLLSLAGLPPLTGFLPKWLILQELTKQELTTTATIIALLS-LLGLFFYLRLAY 298
Cdd:MTH00020 369 TYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSaLLTAFYSIRLIY 428
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-284 |
2.18e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 52.13 E-value: 2.18e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 2 NPQAKLIFSMSLLLGTTITISSNHWMMaWTGLEINTLAILPLISKSHHPRAIEASTKYFLVQATASTLL-------LFSS 74
Cdd:PRK06589 115 SSRFLFFFNLTILIGVLIALSSDLFTM-FVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLflpavilIYTK 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 75 MTNAWFTGQWDITQLTHPVSCMLLTTAISmKLGLVPFHFWFPEVLQGSPLMTSLLLATVM----KFPPTILLLLTSPSLN 150
Cdd:PRK06589 194 TGNLDFVSGGLFSKNQSIILLLMFIYGIA-KTAIFPVHSWLPAAMVAHYPVSALLHAVIVvktgLFCIYKILLYIFGLSY 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 151 PTMLFMM-------AIASAALGGWMGLNQTQIRKIMAFSSISHLGW--MTVILVYNPKLTLVTFYL--YSLTTAAIFFTL 219
Cdd:PRK06589 273 LQRIFAEfnwlifiPIVSIFYSSLKALKTDNIKKILAYSTISQLSLalLSAFILTPKALGAAILHLvsHSFAKICLFYSM 352
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1477052442 220 HSNNTLK----LSTLMTAWSKIPTLNATLMITLLSLAGLPPLTGFLPKWLILQELTKQELTTTATIIAL 284
Cdd:PRK06589 353 GSIYSLKkedqVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVML 421
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-295 |
3.51e-07 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 51.68 E-value: 3.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 13 LLLGTTITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLVQATA------STLLLFSSMTNAWFTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 87 TQLTHPV----------SCMLLTTAISMKLGLVPFHFWFPEVLQGSPLMTSLLLATVMKFPPTILLLLTSPSLNPT---- 152
Cdd:PRK08676 191 TELAAHAsllspsvlgaSFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSgaae 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 153 ----MLFMMAIASAALGGWMGLNQTQIRKIMAFSSISHLGWMTVILVYNPKLTL--VTFYL--YSLTTAAIFFT---LHS 221
Cdd:PRK08676 271 qfsnVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALfwMLFHMlaHSLVKSGLFFSagiLHR 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1477052442 222 NNTLKLSTLMTAWSKIPTLNA-TLMITLLSLAGLPPLTGFLPKWLILQELTKQELTTTATIIALLSLLG---LFFYLR 295
Cdd:PRK08676 351 QYRSDRFDRIFDVFRLQPVAAwGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAAssfAIFLLK 428
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
53-298 |
3.81e-07 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 51.49 E-value: 3.81e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 53 IEASTKYFLVQATASTLLL---------FSSMTNAWFTGQWDITQLTHPVS--CMLLTTAISMKLGLVPFhFWFPEVLQG 121
Cdd:PRK12663 157 LRGAIKYVVLNLIGSWLFLlgigllygtFGTLNMAHIAMRLNDMGDTATLTtiALLFLLAFGMKAALFPF-MWLPAAYHT 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 122 SPLMTSLLLATVMK-------FPPTILLLLTSPSLNPTMLFMMAIASAALGGWMGLNQTQIRKIMAFSSISHLGWMTVIL 194
Cdd:PRK12663 236 PNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGL 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 195 VYNPKLTLvtfylysltTAAIFFTLHS-----------------NNTLKLSTLMTAWSKIPTLNATLMITLLSLAGLPPL 257
Cdd:PRK12663 316 ALGTPAGI---------NGAIFYLVHDmvvktalfliagslvrlTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPF 386
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1477052442 258 TGFLPKWLILQ-ELTKQELTTTATIIA--LLSLLGLFFYLRLAY 298
Cdd:PRK12663 387 SGFWGKVLLVQgALDNGAYILLALMLItsLITMYSLFRIFFLAY 430
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
59-291 |
5.35e-07 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 51.27 E-value: 5.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 59 YFLVQATASTLLLFSSMTNAWF-TGQWDITQLTHP-----VSCMLLTTAISMKLGLVPFHFWFPEVLQGSP-----LMTS 127
Cdd:PRK08667 166 FYFVMTQLSTVFLMLGIIVLFIqTGSFELSPLGASagilsLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPsnvsaLMSG 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 128 LLLATVMKFPPTILLLLTSPSLNPTMLFMMA-IASAALGGWMGLNQTQIRKIMAFSSISHLG-WMTVILVYnpkltlVTF 205
Cdd:PRK08667 246 VMLKVAVYGLVRFLMDVLSPELWWGVLILLAgSISALLGVIYALKEHDLKGLLAYSSIENIGiILMGIGLY------VIF 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 206 YLYSLTT-------AAIFFTL-----------------HSNNTLKLSTLMTAWSKIPTLNATLMITLLSLAGLPPLTGFL 261
Cdd:PRK08667 320 GVYGLDTlallalgGALFHSLnhalfksllfltagsvvHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFA 399
|
250 260 270
....*....|....*....|....*....|.
gi 1477052442 262 PKWLILQELTKQELTTTATI-IALLSLLGLF 291
Cdd:PRK08667 400 SELLLYESFFQSFSVADPLIkILLFSVLAIF 430
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
92-268 |
5.39e-07 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 51.11 E-value: 5.39e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 92 PVSCMLLTTAI--SMKLGLvpfHFWFPEVLQGSPLMTSLLLATVMKFPPTILLLLTSPSLNPTMLFMMAIA-----SAAL 164
Cdd:MTH00032 226 IIGILLLIGCIgkSAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITifgalTAFF 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 165 GGWMGLNQTQIRKIMAFSSISHLGWMTVILVYNPKLTLVTFYL--YSLTTAAIFFT----LHSNNT--LKLSTLMTAWSK 236
Cdd:MTH00032 303 AATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSHNVGLFHLvnHAFFKALLFLSagsvIHSTTVdeQDMRKMGGLIHS 382
|
170 180 190
....*....|....*....|....*....|..
gi 1477052442 237 IPTLNATLMITLLSLAGLPPLTGFLPKWLILQ 268
Cdd:MTH00032 383 IPFTYTMMLIGSFSIMGLPYLTGFYSKDLILE 414
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-267 |
1.41e-06 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 49.82 E-value: 1.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 50 PRAIEASTKYFLVQATASTLLLFSSMTNAWF----TGQWDITQL-THPVS---------CMLLTTAIsmKLGLVPFHFWF 115
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLlNLPLPpgvqywlflAFFIAFAV--KMPMFPLHTWL 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 116 PEVLQGSPLMTSLLLATVMKFPPTILLLLTSPSLNP-------TMLFMMAIASAALGGWMGLNQTQIRKIMAFSSISHLG 188
Cdd:PRK05846 235 PDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPdashefaPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMG 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 189 WMTV-ILVYNPK-LTLVTFYLYS--LTTAAIFFT-------LHsnnTLKLSTLMTAWSKIPTLNATLMITLLSLAGLPPL 257
Cdd:PRK05846 315 FVTLgIFAGNQLgIQGAIFQMIShgLSSAALFLLvgvlydrLH---TRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGT 391
|
250
....*....|
gi 1477052442 258 TGFLPKWLIL 267
Cdd:PRK05846 392 SGFVGEFLIL 401
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
110-286 |
2.28e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 49.42 E-value: 2.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 110 PFHFWFPEVLQG-SPLMTSLLLATVMK---FpptiLLLLTSPSLNPTMLFMMAIASAAL-----GGWMGLNQTQIRKIMA 180
Cdd:PRK12648 225 PFHFWLPHAMAApTPVSAYLHSATMVKagvF----LLARLWPVLAGTEEWFWIVGGAGLitlllGAYFALFQHDLKGLLA 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 181 FSSISHLGWMTVILVYNPKLTLVtfylyslttAAIFFTL-HSnnTLKLSTLMTA------------------WSKIPtLN 241
Cdd:PRK12648 301 YSTISHLGLITLLLGLGSPLAAV---------AAIFHIInHA--TFKASLFMAAgiidhetgtrdmrrlsglRRLMP-IT 368
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1477052442 242 ATL-MITLLSLAGLPPLTGFLPKWLILQELTKQELTTT--------ATIIALLS 286
Cdd:PRK12648 369 ATLaMVAAAAMAGVPLLNGFLSKEMFFAETLDTHLLGSldwllpvaATLAGAFS 422
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-298 |
2.64e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 48.87 E-value: 2.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 34 EINTLAILPLISKSHHPRAIEASTKYFLVQATASTLLLFSSMTNAWFTGQWDITQ-----LTHPVSCMLLTTAISMKLGL 108
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSPVIYGGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 109 V------PFHFWFPEVLQGSPLMTSLLLATVMKFPPTILLLLT---------SPSLNPTMLFMmAIASAALGGWMGLNQT 173
Cdd:PRK06277 210 LygsglpPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIfklfgglsyFPSAQGVLIAL-SVLAMVFGVVMALLQT 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 174 QIRKIMAFSSISHLGWMTVILVYNPKLTLVTFYLYS----LTTAAIFFTLH-------SNNTLKLSTLMTAwskIPTLNA 242
Cdd:PRK06277 289 DYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAinhvIYKSALFLGAGivsyrtkTSNLRKLGGLLPV---MPVVAF 365
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1477052442 243 TLMITLLSLAGLPPLTGFLPKWLILQELTKQELTTTATIIALLSLLGLFFYLRLAY 298
Cdd:PRK06277 366 MVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY 421
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
9-270 |
4.39e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 48.25 E-value: 4.39e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 9 FSMSLLLGTTITISSNHWMM--AWTGLEINTLAILPLISKSHHPRAIeastkyFLVQATASTLLLFSSMTNAWF-TGQWD 85
Cdd:PRK06459 78 YILTILGMAIVLTSDNYLLFlaGWEIMTIPSYVAIALTKKNKRPAFV------FMAFGELSTVLILAGFAWAFIiSGTTN 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 86 ITQLTHPVSCMLLTTAISMKLGLVPFHF--WFPEVLQGSPLMTSLLLATVMK----FPPTILLLLTSPS-LNPTMLFMMA 158
Cdd:PRK06459 152 FSYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTlmgvYGILKMTILTQTIpIGYFGLTILA 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 159 IA--SAALGGWMGLNQTQIRKIMAFSSISHLGWMTV-----ILVYNPKLTLVTFYLYSLTTAAIFFTLhSNNTLKLSTLM 231
Cdd:PRK06459 232 IGafSILFGALYAYVSENVKGLLAFSTIENNGAILValglyMVTKQLITSIEHFSLITVILYSFAHSV-AKTGLFLSSGL 310
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 1477052442 232 TAWSKIPTLNAT--------LMITLLSLAGLPPLTGFLPKWLILQEL 270
Cdd:PRK06459 311 QEKQSITYSKKIrnrwielgLTLLASSLSGLLPNIGGVASWLLLESL 357
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
4.67e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 48.29 E-value: 4.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 48 HHPRAIEASTKYFLVQATASTLLLFSSMTNAWFTGQWDITQLTHP--------------VSCMLLTTAISMKLGLVPFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDselienikghplflITLILIFIGAAAKSAQGPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 114 WFPEVLQGSPLMTSLLLATVMKFPPTILLLLTSPSLNPTMLFMM-----AIASAALGGWMGLNQTQIRKIMAFSSISHLG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFIlvsgtGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 189 WMTVILVYNPK------LTLVTFYLYSLTT--AAIFFTL----HSNNTLKLSTLMTAWSKIPTLNATLMITLLSLAGLPP 256
Cdd:PRK12649 316 YLMTMYGYTTYhepglgVAAATFHLLNHATfkACLFLVAgivaHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
....*..
gi 1477052442 257 LTGFLPK 263
Cdd:PRK12649 396 LNGFLSK 402
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-339 |
2.27e-05 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 41.47 E-value: 2.27e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 1477052442 291 FFYLRLAYCATITLPPNSANHMKQWQTNKSVKT-LTSIFSVLSIMLMPLS 339
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTlLLPTLTTLSILLLPLT 50
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-265 |
5.65e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 44.91 E-value: 5.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 101 AISMKLGLVPFHFWFPEVLQGSPLMTSLLLATV-MKFPPTILLLLTSP-------SLNPTMLfMMAIASAALGGWMGLNQ 172
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGIlLKLGGYGLVRLSWPilplgaqNLAPAVI-AMGIVGIVYGSFATCRQ 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 173 TQIRKIMAFSSISHLGWMTVILVYNPKLTL------------VTFYLYSLTTaaIFFTLHSNNTLK----LSTLMTAWSK 236
Cdd:MTH00226 318 IDVKRLVAYSSVAHMGLVSITLVTHDIIGLtgsifimlahgiVSSLLFILVT--ILYDRHHTRLIKyyrgLSITMPIWGT 395
|
170 180
....*....|....*....|....*....
gi 1477052442 237 IptlnatLMITLLSLAGLPPLTGFLPKWL 265
Cdd:MTH00226 396 I------MIVTSLANVAVPPSGNFIGEYL 418
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-266 |
1.15e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 43.92 E-value: 1.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 55 ASTKYFLVQATASTLLLFSSMTNAWFTG--QWDITQL---THPVSCMLLTTA-----ISMKLGLVPFHFWFPEVLQGSPL 124
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLrshTLPLSTQLLLLApilvgFGIKIPLVPFHTWLPDAHVEAST 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 125 MTSLLLATVMKFPPTILLLLTSPSLNPTM-------LFMMAIASAALGGWMGLNQTQIRKIMAFSSISHLGWMTVILVYN 197
Cdd:PRK06473 238 PVSVLLAGVLLKLGTYGLLRFGVGLFPEAwvylapwLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAA 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 198 PKLTLV--TFYLYS--LTTAAIFFTL-------HSNNTLKLSTLMTAWSKIPTLNATLMITLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK06473 318 TPLSILaaVFQMIShgLISALLFLLVgvvykktGSRDVDVLRGLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEFLV 397
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-296 |
1.42e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 43.40 E-value: 1.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 103 SMKLGLVPFHFWFPEVLQGSP---------LMTSLLLATVMKfppTILLLLT-SPSLNPTMLFMMAIASAALGGWMGLNQ 172
Cdd:PRK07691 220 ATKAGLFPLYFWLPGSYYAPPiaiaalfgaLLTKVGVYAIAR---TFTLFFShDTSFTHYLILILALLTIIFGVIGAVAY 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 173 TQIRKIMAFSSISHLGWMTVILVYNPKLTLV--TFYLYS--LTTAAIFF----TLHSNNTLKLSTLMTAWSKIPTLNATL 244
Cdd:PRK07691 297 FDIKKIIIYNIMIAVGVILVGVAMMTESGMIgaIYYLIHdmIVKAALFLligiMIKITGTTDLKKMGGLIKRYPVLGWMF 376
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1477052442 245 MITLLSLAGLPPLTGFLPKWLILQELTKQELTTTATIIALLSLLGLFFYLRL 296
Cdd:PRK07691 377 FIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-272 |
1.44e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 43.66 E-value: 1.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 107 GLVPFHFWFPEVLQGSPLMTSLLLATV-MKFPPTILLLLTSPSLNP-----TMLFMMAIASAALGGWMGLNQTQIRKIMA 180
Cdd:PRK08042 195 GIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAplwwgVALLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 181 FSSISHLG--------WMTVILVYNPKLTLVTFY--LYSLTTAAIFFTL---------HSNNTLKLSTLMTAWSKIPTLN 241
Cdd:PRK08042 275 YHTLENIGiillglgaGVTGIALEQPALIALGLVggLYHLLNHSLFKSVlflgagsvwFRTGHRDIEKLGGIGKKMPVIS 354
|
170 180 190
....*....|....*....|....*....|.
gi 1477052442 242 ATLMITLLSLAGLPPLTGFLPKWLILQELTK 272
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
92-293 |
2.08e-04 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 43.21 E-value: 2.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 92 PVSCMLLTTAISmKLGLVPFHFWFPEVLQGSPLMTSLLLATVMKFPPTILLLLTSPSLNPTMLFM-----MAIASAALGG 166
Cdd:PRK12646 211 PMIFMFLLGAFT-KSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIyivtfVGLITMLFGS 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 167 WMGLNQTQIRKIMAFSSISHLGWMTVI------LVYNPKLTLVTFY-------LYSLTTAAIFFTL---------HSNNT 224
Cdd:PRK12646 290 ITALKQWDLKGILAYSTISQLGMIMAMvgigggYAQHQQDAIASIYvfvlfaaLFHLMNHAIFKCAlfmgvgiidHEAGT 369
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1477052442 225 LKLSTLMTAWSKIPTLNATLMITLLSLAGLPPLTGFLPKWLILQELTK--------QELTTTATIIALLSLLGLFFY 293
Cdd:PRK12646 370 RDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQtgqlsqfsLISMIIIVFIGVIASIFTFTY 446
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-268 |
3.32e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 42.39 E-value: 3.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 55 ASTKYFLVQATASTLLLFSSMTNAWFTGQ----------WDITQLTHPVSCMLLTTAISMKLGLVPFHFWFPEVLQGSPL 124
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGStsfdydaistQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 125 MTSLLLATVMKFPPTILLLLTSPSLNPTM-------LFMMAIASAALGGWMGLNQTQIRKIMAFSSISHLGWMTVILVYN 197
Cdd:PRK07363 238 AVAILLGGVLAKLGTYGLLRFGLQLFPQTwslvapgLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAG 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 198 PKLTLV----TFYLYSLTTAAIFF-------TLHSNNTLKLSTLMTAWSKIPTLNATLMITLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK07363 318 TQLSLLgavaQMISHGLILALLFHlvgiverKVGTRDLDVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIV 397
|
..
gi 1477052442 267 LQ 268
Cdd:PRK07363 398 FQ 399
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-296 |
3.99e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 42.08 E-value: 3.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 1 MNPQAKLIFSMSLLL---GTTITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEASTKYFLVQATASTLLLFSSMTN 77
Cdd:PRK06591 109 INNNRKSLFYGILLFahtGYLGMIATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLILIAIGFL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 78 AWFTGQWDIT-------QLTHP----VSCMLLTTAISMKLGLVPFHFWFPEVLQGS---------PLMTSLLLATVMKFP 137
Cdd:PRK06591 189 LSITGSLNMTdiaaylqEHTNSriitIAIGFFLIGAILKTAFFPMHFWMMRAYNNTasvilvylaGISTIIGIYIIYKFT 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 138 PTILLLLTSPSLNPTMLFMMAIASAALGGWMGLNQTQIRKIMAFSSISHLGWMTVILVYNPKLTLVTFYLYSLTTAAIFF 217
Cdd:PRK06591 269 YIIIGYETIKTAITNFIRPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYVFLLYVTENGIIILPSLLLADSINKIAL 348
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1477052442 218 TLhsnntlkLSTLMTAWSKIPtLNATLMITLLSLAGLPPLTGFLPKWLILQELTKQELTTTATIIALLSLLGLFFYLRL 296
Cdd:PRK06591 349 FL-------IDAYNESYKREP-NKVLIIIAIICSCGLPISPLFFIKVNILELLLTQNLLLDFIIILLSSVGSLFYHYKM 419
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
52-190 |
1.49e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 40.39 E-value: 1.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 52 AIEASTKYFLVQATASTLLLFSSMTNAWFTGQWDITQLTHPVSCMLLTTAISMKLGLV----------------PFHFWF 115
Cdd:PRK07376 171 AADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLlcilvflgpmaksaqfPLHVWL 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 116 PEVLQGSPLMTSLLLATVMKFPPTILLLLTSPSLNPTMLFMMAIA-----SAALGGWMGLNQTQIRKIMAFSSISHLGWM 190
Cdd:PRK07376 251 PDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAwtgaiTAFLGASIALTQNDIKKGLAYSTISQLGYM 330
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
11-190 |
1.52e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 40.45 E-value: 1.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 11 MSLLLGTTITISSNHW---MMAW--TGLEINTLailpLISKSHHPRAIEASTKYFLVQATASTLLLFSSMTNAWFTGQWD 85
Cdd:PRK08168 107 AGVLAAVHLLVLSDHLlvlIAAWaaISLALHRL----LCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLS 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 86 ITQL--------THP---VSCMLLTTAISMKLGLVPFHFWFPEVLQGSPLMTSLLLATV--------MKFPPtilLLLTS 146
Cdd:PRK08168 183 LSALwahlaaqgASPslqAAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVvnlggfvlIRFAP---LLEQA 259
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1477052442 147 PSLNpTMLFMMAIASAALGGWMGLNQTQIRKIMAFSSISHLGWM 190
Cdd:PRK08168 260 PPAR-WLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFM 302
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
103-303 |
1.64e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 40.38 E-value: 1.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 103 SMKLGLvpfHFWFPEVLQGSPLMTSLLLATVMKFPPTILLLLTSP-----SLNPTMLFMMAIASAALGGWMGLNQTQIRK 177
Cdd:MTH00210 225 SAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPlfegsPLALTIVTILGALTAFFAATVGVVQNDLKK 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 178 IMAFSSISHLGWMTVILvynpKLTLVTFYLYSLTTAAIFFTL---------HSNNTLKLSTLMTAWSK-IPTLNATLMIT 247
Cdd:MTH00210 302 VIAYSTCSQLGYMVMVC----GISNYSTSLFHLMNHAFFKALlflsagsviHAVSDEQDMRKMGGLIKsIPFTYVMILIG 377
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1477052442 248 LLSLAGLPPLTGFLPKWLILqeltkqELTTTATIIALLSLLGLF------FY-LRLAYCATIT 303
Cdd:MTH00210 378 SLSLMGFPYLTGFYSKDLIL------ELTYDKYYIAFAYWLGSFsalltaFYsIRLIYLTFIT 434
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
82-268 |
1.91e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 40.13 E-value: 1.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 82 GQWDITQLTHPVSCMLLTTAISM----KLGLVPFHFWFPEVLQGSPLMTSLLLATVMKFPPTILLLLTSPSLNPTMLF-- 155
Cdd:MTH00207 165 GHWSITNMWQTDMNNYIALSIMIaamtKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYWFnp 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 156 ---MMAIASAALGGWMGLNQTQIRKIMAFSSISHLGWMTVILVYN-PKLTLVTFYLYSLTTAAIF--------FTLHSNN 223
Cdd:MTH00207 245 allLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGmPKLALFHLITHALFKALLFvcagslihSHHHSQD 324
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 1477052442 224 tlkLSTLMTAWSKIPTLNATLMITLLSLAGLPPLTGFLPKWLILQ 268
Cdd:MTH00207 325 ---LRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILE 366
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
97-268 |
2.37e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 39.57 E-value: 2.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 97 LLTTAISMKLGLVPFHFWFPEVLQGSPLMTSLLLAT------VMKFPPTILLLLTSPSLNpTMLFMMAIASAALGGWMGL 170
Cdd:PRK12665 214 VLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGlltkvgVYAIIRTHTLLFPGGGLD-TLLMVVALLTMVVGILGAI 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 171 NQTQIRKIMAFSSISHLGWMTVILVYNPKLTLvtfylysltTAAIFFTLH--------------------SNNTLKLSTL 230
Cdd:PRK12665 293 AQSDIKRLLSFTLVSHIGYMVFGIALSTVAGL---------SGAIYYVAHhitvqttlflvvglierqagSSSLRRLGGL 363
|
170 180 190
....*....|....*....|....*....|....*...
gi 1477052442 231 MTAwskIPTLNATLMITLLSLAGLPPLTGFLPKWLILQ 268
Cdd:PRK12665 364 AKA---SPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-290 |
3.90e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 38.86 E-value: 3.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 55 ASTKYFLVQATASTLLLFSSMTNAWFTGQ--WDITQLTH---PVSCMLLT-----TAISMKLGLVPFHFWFPEVLQGSPL 124
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAksyPLALELLLyagflIAFGVKLPIFPLHTWLPDAHGEASA 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 125 MTSLLLATVM-KFPPTILLLLTSPSLNPT------MLFMMAIASAALGGWMGLNQTQIRKIMAFSSISHLGWM------- 190
Cdd:PRK12561 218 PVSMILAGVLlKMGGYALIRFNVQMLPDAhvyfapALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVllgiaaf 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 191 TVILVYNPKLTLVTfylYSLTTAAIFF----TLHSNNTLKLSTLMTAWSKIPTLNATLMITLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK12561 298 TDLGISGAMLQMIS---HGLIAAALFFltgvTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTV 374
|
250 260
....*....|....*....|....*.
gi 1477052442 267 LQELTKQELTTTA--TIIALLSLLGL 290
Cdd:PRK12561 375 FLGITSSDVYSSTfrTITILLAAVGL 400
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
33-288 |
3.98e-03 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 38.80 E-value: 3.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 33 LEINTLAILPLISKSHHPRAIEASTKYFLVQATAS------TLLLFSSMTNAWFTGQWDITQLTHPVSCMLLTTAISMKL 106
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSlglylaAATLFLQTGTFALSALSGLHGSLKYLVFLGILFAAWGKS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 107 GLVPFHFWFPEVLQGSPLMTSLLLATVMKFPPTILLLLTSPSLNP------TMLFMMAIASAALGGWMGLNQTQIRKIMA 180
Cdd:PRK06525 222 AQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPiphvigYVGAVMAIVTLLYGFLMYLPQQDMKRLLA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 181 FSSISHLGWMTVIL---VYNPKLTLV--TFYLYS---------LTTAAIFFTLHSNNTLKLSTLMtawSKIPTLNATLMI 246
Cdd:PRK06525 302 YSTITQLGYMFFGLslaILGSRLALEgsIAYIFNhafakslffLVAGALSYSCGTRLLPRLRGVL---KKLPLVGVGFCV 378
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1477052442 247 TLLSLAGLPPLTGFLPKWLILQELTKQELTTTATIIALLSLL 288
Cdd:PRK06525 379 AALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLLL 420
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
104-270 |
4.10e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 39.10 E-value: 4.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 104 MKLGLVPFHFWFPEVLQGSPLMTSLLLATVM------KFPPTILLLLTSPSLNpTMLFMMAI--ASAALGGWMGLNQTQI 175
Cdd:PRK06521 222 AKAGLVPLHVWLPRAHPAAPSHVSALMSGVMlkvaiyGILRVVFDLLGAPGWW-WGVLVLALgaISAVLGVLYALAEHDL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 176 RKIMAFSSISHLGWMTVIL-------VYNPK------LTLVTFYLYS---------LTTAAIFFTLHSNNTLKLSTLMta 233
Cdd:PRK06521 301 KRLLAYSTIENIGIIFVGLglamvfiAYGMPllaalaLTAALYHLLNhalfksllfLGAGAVLHATGTRDMEKLGGLI-- 378
|
170 180 190
....*....|....*....|....*....|....*..
gi 1477052442 234 wSKIPTLNATLMITLLSLAGLPPLTGFLPKWLILQEL 270
Cdd:PRK06521 379 -RRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSL 414
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
93-298 |
4.12e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 38.86 E-value: 4.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 93 VSCMLLTTAISMKLGLVPFHFWFPEVLQG----SPLMTSLLLATVMKFpptiLLLLTSPSLNPTMLFMMAI-----ASAA 163
Cdd:MTH00209 176 VISVLIVLAAMTKSAQIPFSAWLPAAMAAptpvSALVHSSTLVTAGVY----LLIRFFPSLFSSPFFSMSLlllgsLTTL 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1477052442 164 LGGWMGLNQTQIRKIMAFSSISHLGWMTVILVYN-PKLTLVTFYLYSLTTAAIFFT----LHSN-NTLKLSTLMTAWSKI 237
Cdd:MTH00209 252 MASMSANVESDLKKIIALSTLSQLGLMMCSLGLNqPELAFFHLITHALFKALLFICagniIHSHgHSQDIRMVGNLWYQM 331
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1477052442 238 PTLNATLMITLLSLAGLPPLTGFLPKWLILQELTKQELTTTATIIALLSL-LGLFFYLRLAY 298
Cdd:MTH00209 332 PITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTsLTAAYSMRLSY 393
|
|
| |
