core protein, partial [Hepacivirus hominis]
List of domain hits
Name | Accession | Description | Interval | E-value | |||
HCV_core super family | cl46603 | Hepatitis C virus core protein; The viral core protein forms the internal viral coat that ... |
1-98 | 2.09e-39 | |||
Hepatitis C virus core protein; The viral core protein forms the internal viral coat that encapsidates the genomic RNA and is enveloped in a host cell-derived lipid membrane. The core protein has been shown, by yeast two-hybrid assay to interact with cellular DEAD box helicases. The N terminus of the core protein is involved in transcriptional repression. The actual alignment was detected with superfamily member pfam01543: Pssm-ID: 480943 Cd Length: 121 Bit Score: 127.50 E-value: 2.09e-39
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Name | Accession | Description | Interval | E-value | |||
HCV_capsid | pfam01543 | Hepatitis C virus capsid protein; |
1-98 | 2.09e-39 | |||
Hepatitis C virus capsid protein; Pssm-ID: 144947 Cd Length: 121 Bit Score: 127.50 E-value: 2.09e-39
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Name | Accession | Description | Interval | E-value | |||
HCV_capsid | pfam01543 | Hepatitis C virus capsid protein; |
1-98 | 2.09e-39 | |||
Hepatitis C virus capsid protein; Pssm-ID: 144947 Cd Length: 121 Bit Score: 127.50 E-value: 2.09e-39
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HCV_core | pfam01542 | Hepatitis C virus core protein; The viral core protein forms the internal viral coat that ... |
1-58 | 1.51e-17 | |||
Hepatitis C virus core protein; The viral core protein forms the internal viral coat that encapsidates the genomic RNA and is enveloped in a host cell-derived lipid membrane. The core protein has been shown, by yeast two-hybrid assay to interact with cellular DEAD box helicases. The N terminus of the core protein is involved in transcriptional repression. Pssm-ID: 460245 Cd Length: 75 Bit Score: 70.48 E-value: 1.51e-17
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Blast search parameters | ||||
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