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Conserved domains on  [gi|1534886187|gb|AZL93369|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Parevania sp. ZJUH_2016024]

Protein Classification

NADH dehydrogenase subunit 4L( domain architecture ID 10009597)

NADH dehydrogenase subunit 4L is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (complex I) that is believed to belong to the minimal assembly required for catalysis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 1-86 7.31e-11

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177218  Cd Length: 89  Bit Score: 53.23  E-value: 7.31e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1534886187  1 MKFFFLFIMVYFMMSLIFLLTQSFLMMLVSLEFLTLSTLINLYWGMSLLNLSFYVIMYFLVFVVCEAVLGLSILVMIMRE 80
Cdd:MTH00162   2 MMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRS 81


                 ....*.
gi 1534886187 81 SGSDYF 86
Cdd:MTH00162  82 HGNDYF 87
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 1-86 7.31e-11

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 53.23  E-value: 7.31e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1534886187  1 MKFFFLFIMVYFMMSLIFLLTQSFLMMLVSLEFLTLSTLINLYWGMSLLNLSFYVIMYFLVFVVCEAVLGLSILVMIMRE 80
Cdd:MTH00162   2 MMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRS 81


                 ....*.
gi 1534886187 81 SGSDYF 86
Cdd:MTH00162  82 HGNDYF 87
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 1-86 7.31e-11

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 53.23  E-value: 7.31e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1534886187  1 MKFFFLFIMVYFMMSLIFLLTQSFLMMLVSLEFLTLSTLINLYWGMSLLNLSFYVIMYFLVFVVCEAVLGLSILVMIMRE 80
Cdd:MTH00162   2 MMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRS 81


                 ....*.
gi 1534886187 81 SGSDYF 86
Cdd:MTH00162  82 HGNDYF 87
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 1-86 3.58e-08

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 46.38  E-value: 3.58e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1534886187  1 MKFFFLFIMVYFMMSLIFLLTQ--SFLMMLVSLEFLTLSTLINLYWGMSLLNLSFYVIMYFLVFVVCEAVLGLSILVMIM 78
Cdd:MTH00149   2 MFMLLLLSLFGFLMGVFALLFQykHLLSILLSLEALMLSLLVMMFSSSGLISFSSYLFLIILTFGACEASLGLSLLVSLI 81


                 ....*...
gi 1534886187 79 RESGSDYF 86
Cdd:MTH00149  82 RLHGNDYV 89
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 4-86 7.81e-05

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 38.03  E-value: 7.81e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1534886187  4 FFLFIMVYFMMSLIFLLTQS--FLMMLVSLEFLTLSTLINLYWGMSLLNLSFYVIMYFLVFVVCEAVLGLSILVMIMRES 81
Cdd:MTH00188   5 MILVILLFVVLGLFTFLLNRkhLLMLLLSLEAIMLSLFWFLLVGLSYMEKELYLSLVLLTFAACEASVGLALLVSLIRSH 84


                 ....*
gi 1534886187 82 GSDYF 86
Cdd:MTH00188  85 GSDYV 89
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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