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Conserved domains on  [gi|14042620|dbj|BAB55325|]
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unnamed protein product [Homo sapiens]

Protein Classification

nucleotide-sugar transporter family protein( domain architecture ID 706892)

nucleotide-sugar transporter family protein may mediate the transport of nucleotides or sugars or their derivatives; belongs to the drug/metabolite transporter (DMT) superfamily

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
UAA super family cl26745
UAA transporter family; This family includes transporters with a specificity for ...
 1-183 3.39e-60

UAA transporter family; This family includes transporters with a specificity for UDP-N-acetylglucosamine.


The actual alignment was detected with superfamily member pfam08449:

Pssm-ID: 462479 [Multi-domain]  Cd Length: 307  Bit Score: 189.43  E-value: 3.39e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14042620     1 MVTMFFTVSVVNNYALNLNIAMPLHMIFRSGSLIANMILGIIILKKRYSIFKYTSIALVSVGIFICTFMSAKQVTSqssl 80
Cdd:pfam08449  73 LVALFFITSVLNNEALKYDISYPTHIIFRSSKLIPVMIMGILILGKRYSKLQYLSAFLVTLGIIIFTLFSAKDKVA---- 148

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14042620    81 senDGFQAFVWWLLGIGALTFALLMSARMGIFQETLYKRFGKHSKEALFYNHALPLPGFVFLASDIYDHAVLFNKSELYE 160
Cdd:pfam08449 149 ---DSVVSPNFFLIGIAMLSGALLLDAFLGNYQEKTYKKYGKHSKEMLFYSHLLSLPFFLLLQGDLFSAVQFCSQSPDKA 225

                         170       180
                  ....*....|....*....|...
gi 14042620   161 IpvigVTLPIMWFYLLMNIITQT 183
Cdd:pfam08449 226 V----LSLPSMLFYLLLNVLTQY 244
 
Name Accession Description Interval E-value
UAA pfam08449
UAA transporter family; This family includes transporters with a specificity for ...
 1-183 3.39e-60

UAA transporter family; This family includes transporters with a specificity for UDP-N-acetylglucosamine.


Pssm-ID: 462479 [Multi-domain]  Cd Length: 307  Bit Score: 189.43  E-value: 3.39e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14042620     1 MVTMFFTVSVVNNYALNLNIAMPLHMIFRSGSLIANMILGIIILKKRYSIFKYTSIALVSVGIFICTFMSAKQVTSqssl 80
Cdd:pfam08449  73 LVALFFITSVLNNEALKYDISYPTHIIFRSSKLIPVMIMGILILGKRYSKLQYLSAFLVTLGIIIFTLFSAKDKVA---- 148

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14042620    81 senDGFQAFVWWLLGIGALTFALLMSARMGIFQETLYKRFGKHSKEALFYNHALPLPGFVFLASDIYDHAVLFNKSELYE 160
Cdd:pfam08449 149 ---DSVVSPNFFLIGIAMLSGALLLDAFLGNYQEKTYKKYGKHSKEMLFYSHLLSLPFFLLLQGDLFSAVQFCSQSPDKA 225

                         170       180
                  ....*....|....*....|...
gi 14042620   161 IpvigVTLPIMWFYLLMNIITQT 183
Cdd:pfam08449 226 V----LSLPSMLFYLLLNVLTQY 244
 
Name Accession Description Interval E-value
UAA pfam08449
UAA transporter family; This family includes transporters with a specificity for ...
 1-183 3.39e-60

UAA transporter family; This family includes transporters with a specificity for UDP-N-acetylglucosamine.


Pssm-ID: 462479 [Multi-domain]  Cd Length: 307  Bit Score: 189.43  E-value: 3.39e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14042620     1 MVTMFFTVSVVNNYALNLNIAMPLHMIFRSGSLIANMILGIIILKKRYSIFKYTSIALVSVGIFICTFMSAKQVTSqssl 80
Cdd:pfam08449  73 LVALFFITSVLNNEALKYDISYPTHIIFRSSKLIPVMIMGILILGKRYSKLQYLSAFLVTLGIIIFTLFSAKDKVA---- 148

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14042620    81 senDGFQAFVWWLLGIGALTFALLMSARMGIFQETLYKRFGKHSKEALFYNHALPLPGFVFLASDIYDHAVLFNKSELYE 160
Cdd:pfam08449 149 ---DSVVSPNFFLIGIAMLSGALLLDAFLGNYQEKTYKKYGKHSKEMLFYSHLLSLPFFLLLQGDLFSAVQFCSQSPDKA 225

                         170       180
                  ....*....|....*....|...
gi 14042620   161 IpvigVTLPIMWFYLLMNIITQT 183
Cdd:pfam08449 226 V----LSLPSMLFYLLLNVLTQY 244
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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