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Conserved domains on  [gi|259479073|dbj|BAI40084|]
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heat shock protein 40, partial [Aeromonas sp. GV20]

Protein Classification

molecular chaperone DnaJ( domain architecture ID 11484931)

molecular chaperone DnaJ, part of the DnaK-DnaJ-GrpE system, prevents the aggregation of unfolded substrate and acts primarily by stimulating the ATPase activity of Hsp70

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
1-297 0e+00

chaperone protein DnaJ; Provisional


:

Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 535.88  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSqggGGHGGFGGGADFADMFGDVFGDIFGG 80
Cdd:PRK10767  27 KLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQG---GGGGGFGGGGGFGDIFGDIFGDIFGG 103
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  81 GRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQGFFAVQQA 160
Cdd:PRK10767 104 GRGGGRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQQGFFTVQQT 183
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 161 CPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEHEIFVRDGNN 240
Cdd:PRK10767 184 CPTCHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRIRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGND 263
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 259479073 241 LYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:PRK10767 264 LYCEVPISFTTAALGGEIEVPTLDGRVKLKIPEGTQTGKLFRLRGKGVKSVRSGARG 320
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
1-297 0e+00

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 535.88  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSqggGGHGGFGGGADFADMFGDVFGDIFGG 80
Cdd:PRK10767  27 KLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQG---GGGGGFGGGGGFGDIFGDIFGDIFGG 103
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  81 GRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQGFFAVQQA 160
Cdd:PRK10767 104 GRGGGRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQQGFFTVQQT 183
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 161 CPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEHEIFVRDGNN 240
Cdd:PRK10767 184 CPTCHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRIRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGND 263
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 259479073 241 LYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:PRK10767 264 LYCEVPISFTTAALGGEIEVPTLDGRVKLKIPEGTQTGKLFRLRGKGVKSVRSGARG 320
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
1-297 1.11e-139

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 398.13  E-value: 1.11e-139
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073    1 RLAMKYHPDRNQgDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSQGGGGHGGFGGGADFADMFGDVFGDIFGG 80
Cdd:TIGR02349  23 KLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGGFNGFDIGFFGDFGDIFGDFFGG 101
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   81 GRGGARRGPARG---SDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQ----G 153
Cdd:TIGR02349 102 GGGSGRRRRSGPrrgEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQgtpfG 181
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  154 FFAVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEHEI 233
Cdd:TIGR02349 182 FFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKI 261
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 259479073  234 FVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:TIGR02349 262 FERDGNDLYIEVPISFTQAILGGEIEVPTLDGDVKLKIPAGTQSGTVFRLKGKGVPRLRGNGRG 325
DnaJ_C pfam01556
DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It ...
95-297 2.07e-87

DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. The two C-terminal domains CTDI and CTDII, both incorporated in this family are necessary for maintaining the J-domains in their specific relative positions. Structural analysis of PDB:1nlt shows that PF00684 is nested within this DnaJ C-terminal region.


Pssm-ID: 460251 [Multi-domain]  Cd Length: 213  Bit Score: 259.88  E-value: 2.07e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   95 LRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQGFFAVQQACPHCHGRGKIIKDP 174
Cdd:pfam01556   1 LEYELELTLEEAYFGCTKKIKITRNVICDTCGGSGAKPGTSPKTCPCCGGGGQVRRQFGFFSTCTCCPCCGGGGKIIDKC 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  175 CRKCHGEGRyQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEHEIFVRDGNNLYCEVPISFTAAAL 254
Cdd:pfam01556  81 CKCCGGGGV-VEKKTLEVKIPAGVDDGQRIRLRGEGDAGENGGPPGDLYVVIRVKPHPVFRRDGDDLYCTVPISLTEALL 159
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 259479073  255 GGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:pfam01556 160 GGTIEVPTLDGKVKLKIPAGTQPGTVLRLKGKGMPRLKGGGRG 202
DnaJ_C cd10747
C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 ...
93-297 4.36e-54

C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70.


Pssm-ID: 199909 [Multi-domain]  Cd Length: 158  Bit Score: 172.99  E-value: 4.36e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  93 SDLRYTMELTLEEAVRGVSKEIKVPTLVHcevcngsgahtgssaqtcptchgsgqvqmrqgffavqqacphchgrgkiik 172
Cdd:cd10747    1 ADLRYDLELTLEEAYFGKEKEIKIPRKVT--------------------------------------------------- 29
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 173 dpcrkchgegRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEHEIFVRDGNNLYCEVPISFTAA 252
Cdd:cd10747   30 ----------RVREKKTLTVKIPAGVDDGQRLRLRGEGDAGPNGGPPGDLYVVIRVKPHPVFRRDGNDLYCEVPISLTEA 99
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 259479073 253 ALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:cd10747  100 LLGGEIEVPTLGGKVKLKIPPGTQPGTVLRLKGKGMPRLRGGGRG 144
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
1-52 1.44e-23

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 93.61  E-value: 1.44e-23
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 259479073   1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSQ 52
Cdd:COG0484   23 KLAKKYHPDRNPGDPEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLA 74
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
1-290 3.29e-20

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 89.88  E-value: 3.29e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDRNqGDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSqgggghggfgGGADFA--DMFGDVFGDI- 77
Cdd:NF037946  28 KLAKKYHPDRN-KAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGVDGE----------GGFGFDafDVFSSFFETIn 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  78 ---------------------FGGGRGGARRGPARGSDL-----------RY-------------TMELTLEEAVRGVSK 112
Cdd:NF037946  97 ksgaflddsvdesvsadddldRLFDDSKEPSFTSGLDEIvqfweafignpDYgyydennewnlilDKNLFTPESVIPTKN 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 113 ---EIKVPTLVH----------------CEVCNGSG--AHTGSSAQTCPTCHGSGqVQMRQGFFAVQQACPHC------- 164
Cdd:NF037946 177 tdlVTKKDDIVVenfdnlnettyksivdLLNNETSGtlALKDGNKETINISNPTV-LSKNLEFDEQTEKLDFSklflrkq 255
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 165 ------------------------------------HGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPagvdTGDRIRLSG 208
Cdd:NF037946 256 lprisetevveqpitnlqepnlniiyevkipqillfNNATKRIKYTRNDCKGKSYTKEQITLDIQLP----ITDKLKLSV 331
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 209 EGE---AGEAGAPAGDLYVQVHVKEHEIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRG 285
Cdd:NF037946 332 NYPgfgHIVGSKTKGDLTIVFKVIKSKFFKLKKNDIHTAALVDPLVAYNGGEILVPTPNQLIKVKIDPGTKNNDQIIIKG 411

                 ....*
gi 259479073 286 KGVKS 290
Cdd:NF037946 412 LGLPA 416
DnaJ smart00271
DnaJ molecular chaperone homology domain;
1-33 6.33e-12

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 59.56  E-value: 6.33e-12
                           10        20        30
                   ....*....|....*....|....*....|....
gi 259479073     1 RLAMKYHPDRNQGD-AASEEKFKEVKEAYEVLTD 33
Cdd:smart00271  24 KLALKYHPDKNPGDkEEAEEKFKEINEAYEVLSD 57
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
1-297 0e+00

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 535.88  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSqggGGHGGFGGGADFADMFGDVFGDIFGG 80
Cdd:PRK10767  27 KLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQG---GGGGGFGGGGGFGDIFGDIFGDIFGG 103
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  81 GRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQGFFAVQQA 160
Cdd:PRK10767 104 GRGGGRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQQGFFTVQQT 183
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 161 CPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEHEIFVRDGNN 240
Cdd:PRK10767 184 CPTCHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRIRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGND 263
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 259479073 241 LYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:PRK10767 264 LYCEVPISFTTAALGGEIEVPTLDGRVKLKIPEGTQTGKLFRLRGKGVKSVRSGARG 320
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
1-297 1.11e-139

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 398.13  E-value: 1.11e-139
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073    1 RLAMKYHPDRNQgDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSQGGGGHGGFGGGADFADMFGDVFGDIFGG 80
Cdd:TIGR02349  23 KLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGGFNGFDIGFFGDFGDIFGDFFGG 101
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   81 GRGGARRGPARG---SDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQ----G 153
Cdd:TIGR02349 102 GGGSGRRRRSGPrrgEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQgtpfG 181
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  154 FFAVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEHEI 233
Cdd:TIGR02349 182 FFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKI 261
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 259479073  234 FVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:TIGR02349 262 FERDGNDLYIEVPISFTQAILGGEIEVPTLDGDVKLKIPAGTQSGTVFRLKGKGVPRLRGNGRG 325
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
1-293 1.03e-114

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 336.00  E-value: 1.03e-114
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSQGGGGHGGF----GGGADF-----ADMFG 71
Cdd:PRK14277  28 RLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQGGFGQggfgGGGFDFdfggfGDIFE 107
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  72 DVFGDIFGGGRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMR 151
Cdd:PRK14277 108 DIFGDFFGTGRRRAETGPQKGADIRYDLELTFEEAAFGTEKEIEVERFEKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTR 187
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 152 Q----GFFAVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVH 227
Cdd:PRK14277 188 QntpfGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRRKIKVNIPAGIDDGQMITLRGEGEPGIKGGPNGDLYIVIK 267
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 259479073 228 VKEHEIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRS 293
Cdd:PRK14277 268 VKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLDGKVKFTIPEGTQTGTKFRLRGKGIPHLRG 333
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
1-297 4.02e-113

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 330.96  E-value: 4.02e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSqgggghgGFGGGADFADMF---GDVFGDI 77
Cdd:PRK14294  27 KLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGT-------GFSGFSGFDDIFssfGDIFEDF 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  78 F---GGGRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQGF 154
Cdd:PRK14294 100 FgfgGGRRGRSRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEPGTSPTTCPQCGGSGQVTQSQGF 179
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 155 FAVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEHEIF 234
Cdd:PRK14294 180 FSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFF 259
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 259479073 235 VRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:PRK14294 260 ERDGNDVHCKVPISFVQAALGAQIEVPTLEGERELKIPKGTQPGDIFRFKGKGIPSLRGGGRG 322
PRK14280 PRK14280
molecular chaperone DnaJ;
1-297 1.19e-111

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 327.83  E-value: 1.19e-111
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDRNQgDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAgvDPSQGGGGHGGFGGgaDFADMFGdvFGDIFGG 80
Cdd:PRK14280  27 KLSKKYHPDINK-EEGADEKFKEISEAYEVLSDDQKRAQYDQFGHA--GPNQGFGGGGFGGG--DFGGGFG--FEDIFSS 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  81 -----GRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQ--- 152
Cdd:PRK14280 100 ffgggGRRRDPNAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQntp 179
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 153 -GFFAVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEH 231
Cdd:PRK14280 180 fGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPH 259
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 259479073 232 EIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:PRK14280 260 EFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGKVKLKIPAGTQTGTQFRLKGKGVPNVRGYGQG 325
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
1-288 3.77e-102

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 303.69  E-value: 3.77e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDRNQgDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDpsqGGGGHGGFGGGADFADmFGDVFGDIFGG 80
Cdd:PRK14298  28 KLAMKYHPDKNK-EPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGID---NQYSAEDIFRGADFGG-FGDIFEMFFGG 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  81 GRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQV-QMRQ---GFFA 156
Cdd:PRK14298 103 GGRRGRMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSPKRCPTCGGTGQVtTTRStplGQFV 182
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 157 VQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEHEIFVR 236
Cdd:PRK14298 183 TTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGADSGLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFER 262
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 259479073 237 DGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGV 288
Cdd:PRK14298 263 VGDDIISEIPISFTQAALGADIMVPTLYGKVKMNIPPGTQTHSVFRLKDKGM 314
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
1-292 2.28e-101

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 301.74  E-value: 2.28e-101
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDRNQGDAAsEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDP-SQGGGGHGgfgggADFADMF---GDVFGD 76
Cdd:PRK14283  28 KLARKYHPDVSEEEGA-EEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGfSQEDIFNN-----INFEDIFqgfGFGIGN 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  77 IFGGGR--GGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQV-QMRQ- 152
Cdd:PRK14283 102 IFDMFGfgGGSRHGPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPGSEVKTCPTCGGTGQVkQVRNt 181
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 153 --GFFAVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKE 230
Cdd:PRK14283 182 ilGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRVSGEGEMGDRGGEPGDLYVVIKVKP 261
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 259479073 231 HEIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVR 292
Cdd:PRK14283 262 HKIFRREGANLYYEKPISFVQAALGDTVDVPTIDGPVELKIPAGTQSGTTFRLKGHGMPSLR 323
PRK14297 PRK14297
molecular chaperone DnaJ;
1-297 1.09e-99

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 297.46  E-value: 1.09e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAgvDPSQGGGGHGGFGGGADFADMFGdvFGDIFGG 80
Cdd:PRK14297  27 KLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTA--DFNGAGGFGSGGFGGFDFSDMGG--FGDIFDS 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  81 -------GRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQ- 152
Cdd:PRK14297 103 ffgggfgSSSRRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKPGTSPKTCDKCGGTGQIRVQRn 182
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 153 ---GFFAVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVK 229
Cdd:PRK14297 183 tplGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVIPLRGQGEHGKNGGPTGDLYINIRVA 262
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 259479073 230 EHEIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:PRK14297 263 PHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDGEVKYEVPAGTQPGTVFRLKGKGVPRVNSTGRG 330
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
1-297 4.51e-98

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 293.19  E-value: 4.51e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSQGGGGHGGFGGG-ADFADMFGDVFGdiFG 79
Cdd:PRK14301  27 KLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGGFGGFSSAEDIfSHFSDIFGDLFG--FS 104
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  80 GGRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQGFFAVQQ 159
Cdd:PRK14301 105 GGGSRRGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQVRQSQGFFQIAV 184
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 160 ACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEHEIFVRDGN 239
Cdd:PRK14301 185 PCPVCRGEGRVITHPCPKCKGSGIVQQTRELKVRIPAGVDTGSRLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQ 264
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 259479073 240 NLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:PRK14301 265 DLVVTQEISFVQAALGDRIEVPTLDDPVTLDIPKGTQSGEVFRLRGKGLPYLGSSQKG 322
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
1-288 1.53e-97

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 291.51  E-value: 1.53e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSqggGGHGGFGGGADFADMFGDvFGDIFGG 80
Cdd:PRK14286  27 KLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAG---AGGFGQGAYTDFSDIFGD-FGDIFGD 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  81 ---------GRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMR 151
Cdd:PRK14286 103 ffgggrgggSGGGRRSGPQRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQIRRT 182
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 152 QGFFAVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEH 231
Cdd:PRK14286 183 QGFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIKIPPGVETGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKH 262
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 259479073 232 EIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGR-VKLKVTPETQTGKMFRMRGKGV 288
Cdd:PRK14286 263 ELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKkAKMKIPEGTESGQVFRLKGHGM 320
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
1-297 8.35e-97

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 290.07  E-value: 8.35e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDRNQgDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPS--QGGGGHGGFGGGADFADmFGDVFGDIF 78
Cdd:PRK14276  27 KLSKKYHPDINK-EPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGfgGGAGGFGGFDGSGGFGG-FEDIFSSFF 104
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  79 GGGRGGARRGP-ARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQ----G 153
Cdd:PRK14276 105 GGGGARRNPNApRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAKPGTSPVTCGKCHGSGVITVDTqtplG 184
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 154 FFAVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEHEI 233
Cdd:PRK14276 185 MMRRQVTCDVCHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVETGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKK 264
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 259479073 234 FVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:PRK14276 265 FERDGSTIYYTLPISFVQAALGDTVEVPTVHGDVELKIPAGTQTGKKFRLRGKGAPKLRGGGNG 328
PRK14293 PRK14293
molecular chaperone DnaJ;
1-288 6.94e-90

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 272.25  E-value: 6.94e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDRNQgDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSQGGgghggfgggADFADM--FGDVFGDIF 78
Cdd:PRK14293  26 RLARKYHPDVNK-EPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAGF---------PDMGDMggFADIFETFF 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  79 -------GGGRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVqmR 151
Cdd:PRK14293  96 sgfggagGQGGRRRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGTGPTTCSTCGGAGQV--R 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 152 Q------GFFAVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQ 225
Cdd:PRK14293 174 RatrtpfGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVSGEGDAGLRGGPPGDLYVY 253
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 259479073 226 VHVKEHEIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGV 288
Cdd:PRK14293 254 LFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGPVELTIPAGTQPNTVLTLENKGV 316
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
1-293 9.17e-88

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 266.88  E-value: 9.17e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDR-NQGDAasEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSQGGGGHGGFGG-GADFADMFGDVFGDIF 78
Cdd:PRK14300  26 KLAKQYHPDTtDAKDA--EKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRGGGGNHGGfHPDINDIFGDFFSDFM 103
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  79 GGGRGGARRGPARG-SDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQGFFAV 157
Cdd:PRK14300 104 GGSRRSRPTSSKVRgSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGETVTTCDACSGVGATRMQQGFFTI 183
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 158 QQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEHEIFVRD 237
Cdd:PRK14300 184 EQACHKCQGNGQIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRIRHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVD 263
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 259479073 238 GNNLYCEVPISFTAAALGGEIEVPTLD-GRVKLKVTPETQTGKMFRMRGKGVKSVRS 293
Cdd:PRK14300 264 GANLHCKLPISFVNAALGGEIEVPVIEgGKVNLTIPAGTQNGDQLRLRSKGMSKMRS 320
DnaJ_C pfam01556
DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It ...
95-297 2.07e-87

DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. The two C-terminal domains CTDI and CTDII, both incorporated in this family are necessary for maintaining the J-domains in their specific relative positions. Structural analysis of PDB:1nlt shows that PF00684 is nested within this DnaJ C-terminal region.


Pssm-ID: 460251 [Multi-domain]  Cd Length: 213  Bit Score: 259.88  E-value: 2.07e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   95 LRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQGFFAVQQACPHCHGRGKIIKDP 174
Cdd:pfam01556   1 LEYELELTLEEAYFGCTKKIKITRNVICDTCGGSGAKPGTSPKTCPCCGGGGQVRRQFGFFSTCTCCPCCGGGGKIIDKC 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  175 CRKCHGEGRyQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEHEIFVRDGNNLYCEVPISFTAAAL 254
Cdd:pfam01556  81 CKCCGGGGV-VEKKTLEVKIPAGVDDGQRIRLRGEGDAGENGGPPGDLYVVIRVKPHPVFRRDGDDLYCTVPISLTEALL 159
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 259479073  255 GGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:pfam01556 160 GGTIEVPTLDGKVKLKIPAGTQPGTVLRLKGKGMPRLKGGGRG 202
PRK14289 PRK14289
molecular chaperone DnaJ;
3-293 3.12e-86

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 263.23  E-value: 3.12e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   3 AMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGV-DPSQGGGGHGGFGGGADFADMFGDVF------- 74
Cdd:PRK14289  30 AIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVgGAAGGGGFSGEGMSMEDIFSMFGDIFgghgggf 109
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  75 GDIFGGGRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQ-- 152
Cdd:PRK14289 110 GGFGGFGGGGSQQRVFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQnt 189
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 153 --GFFAVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKE 230
Cdd:PRK14289 190 ilGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEP 269
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 259479073 231 HEIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRS 293
Cdd:PRK14289 270 HPELIRDENDLIYNLLLSVPTAALGGAVEVPTIDGKAKVKIEAGTQPGKVLRLRNKGLPSVNG 332
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
1-297 2.91e-83

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 255.89  E-value: 2.91e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSQGGGGHGGFGGGAD--------FADMFG- 71
Cdd:PRK14281  26 KLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGGGPGYGGGGGdfndifsaFNDMFGg 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  72 ---------DVFGDIFGGGRGGARRGPA-RGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSaQTCPT 141
Cdd:PRK14281 106 garrgggspFGFEDVFGGGGRRRRASAGiPGTDLKIRLKLTLEEIAKGVEKTLKIKKQVPCKECNGTGSKTGAT-ETCPT 184
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 142 CHGSGQVqmRQ------GFFAVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEA 215
Cdd:PRK14281 185 CHGSGEV--RQasktmfGQFVNITACPTCGGEGRVVKDRCPACYGEGIKQGEVTVKVTVPAGVQDGNYLTLRGQGNAGPR 262
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 216 GAPAGDLYVQVHVKEHEIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRSGQ 295
Cdd:PRK14281 263 GGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDGAVKLTIPAGTQPETMLRIPGKGIGHLRGSG 342

                 ..
gi 259479073 296 VG 297
Cdd:PRK14281 343 RG 344
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
1-297 1.17e-82

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 253.92  E-value: 1.17e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDRNQgDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSQGGGGHGGFGGGADFADM----------- 69
Cdd:PRK14291  26 RLARKYHPDFNK-NPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQGQEGFSDFGGGNIediledvfdif 104
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  70 -FGDVFG-DIFGGGRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQ 147
Cdd:PRK14291 105 gFGDIFGrRRATRERRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCEACGGTGYDPGSGEKVCPTCGGSGE 184
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 148 VQMRQGFFAVQQACPHCHGRGkIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVH 227
Cdd:PRK14291 185 IYQRGGFFRISQTCPTCGGEG-VLREPCSKCNGRGLVIKKETIKVRIPPGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVK 263
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 259479073 228 VKEHEIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDG-RVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:PRK14291 264 VKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGkKEKVKIPPGTKEGDKIRVPGKGMPRLKGSGYG 334
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
1-291 1.18e-82

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 253.78  E-value: 1.18e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDRNQGDAAsEEKFKEVKEAYEVLTDANLRARYDQYGHAgvDPSQGGGGHGGfgggADFaDMFGDVFGDIFGG 80
Cdd:PRK14287  27 KLARKYHPDVNKAPDA-EDKFKEVKEAYDTLSDPQKKAHYDQFGHT--DPNQGFGGGGA----GDF-GGFSDIFDMFFGG 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  81 GRGGARRGP-ARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQ----GFF 155
Cdd:PRK14287  99 GGGRRNPNApRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETCSHCGGSGQLNVEQntpfGRV 178
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 156 AVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEHEIFV 235
Cdd:PRK14287 179 VNRRVCHHCEGTGKIIKQKCATCGGKGKVRKRKKINVKVPAGIDHGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFE 258
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 259479073 236 RDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSV 291
Cdd:PRK14287 259 RDGDDIYCEMPLTFPQVALGDEIEVPTLNGKVKLKIPAGTQTGTSFRLRGKGVPNV 314
PRK14295 PRK14295
molecular chaperone DnaJ;
1-288 3.61e-82

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 252.85  E-value: 3.61e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQ----YGHAGVDPSQGGGGHGGFGGgaDFADMFG----- 71
Cdd:PRK14295  32 KLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEarslFGNGGFRPGPGGGGGGGFNF--DLGDLFGggaqg 109
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  72 -----------DVFGDIFGGGRGGARRGPArgSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCP 140
Cdd:PRK14295 110 gggaggggglgDVFGGLFNRGGRRTQPRRG--ADVESEVTLSFTEAIDGATVPLRLTSQAPCPACSGTGAKNGTTPRVCP 187
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 141 TCHGSGQVQMRQGFFAVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAG 220
Cdd:PRK14295 188 TCSGTGQVSRNSGGFSLSEPCPDCKGRGLIADDPCLVCKGSGRAKSSRTMQVRIPAGVSDGQRIRLRGKGAPGERGGPAG 267
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 259479073 221 DLYVQVHVKEHEIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGR-VKLKVTPETQTGKMFRMRGKGV 288
Cdd:PRK14295 268 DLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPpVTVKLPPGTPNGRVLRVRGKGA 336
PRK14279 PRK14279
molecular chaperone DnaJ;
1-297 2.21e-79

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 245.80  E-value: 2.21e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQ---------YGHAGVDPSQGGGGHGGFGGGADF--ADM 69
Cdd:PRK14279  32 KLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDEtrrlfagggFGGRRFDGGGGFGGFGTGGDGAEFnlNDL 111
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  70 F-----------GDVFGDIFGGGRGGARRGP-ARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQ 137
Cdd:PRK14279 112 FdaagrgggggiGDLFGGLFNRGGGSARPSRpRRGNDLETETTLDFVEAAKGVTMPLRLTSPAPCTTCHGSGARPGTSPK 191
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 138 TCPTCHGSGQVQMRQGFFAVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGA 217
Cdd:PRK14279 192 VCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSIIEDPCEECKGTGVTTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGA 271
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 218 PAGDLYVQVHVKEHEIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSvRSGQVG 297
Cdd:PRK14279 272 PSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGPVGVKVPAGTADGRILRVRGRGVPK-RSGGAG 350
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
1-291 5.44e-75

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 234.74  E-value: 5.44e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSQGGGGHGGFGGGAD----FADMFGDVFG- 75
Cdd:PRK14284  24 KLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFGGAGMGNMEDalrtFMGAFGGEFGg 103
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  76 --DIFGGGRGGARRGPARGSD---------LRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHG 144
Cdd:PRK14284 104 ggSFFEGLFGGLGEAFGMRGGpagarqgasKKVHITLSFEEAAKGVEKELLVSGYKSCDACSGSGANSSQGIKVCDRCKG 183
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 145 SGQVQMRQGFFAVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYV 224
Cdd:PRK14284 184 SGQVVQSRGFFSMASTCPECGGEGRVITDPCSVCRGQGRIKDKRSVHVHIPAGVDSGMRLKMEGYGDAGQNGAPAGDLYV 263
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 259479073 225 QVHVKEHEIFVRDGNNLYCEVPISFTAAALGGEIEVPTL--DGRVKLKVTPETQTGKMFRMRGKGVKSV 291
Cdd:PRK14284 264 FIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLlkEGTCRLTIPEGIQSGTILKVRGQGFPNV 332
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
1-297 9.86e-74

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 230.71  E-value: 9.86e-74
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDRNQGDAAsEEKFKEVKEAYEVLTDANLRARYDQYGhagvDPSQGGGGHGgfgggADFADMFGDvFGDIF-- 78
Cdd:PRK14278  26 KLARELHPDVNPDEEA-QEKFKEISVAYEVLSDPEKRRIVDLGG----DPLESAGGGG-----GGFGGGFGG-LGDVFea 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  79 ----GGGRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQGF 154
Cdd:PRK14278  95 ffggGAASRGPRGRVRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKGTAGDSKPVTCDTCGGRGEVQTVQRS 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 155 FAVQ----QACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKE 230
Cdd:PRK14278 175 FLGQvmtsRPCPTCRGVGEVIPDPCHECAGDGRVRARREITVKIPAGVGDGMRIRLAAQGEVGPGGGPAGDLYVEVHEQP 254
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 259479073 231 HEIFVRDGNNLYCEVPISFTAAALGGEIEVPTL-DGRVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:PRK14278 255 HDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAIlDGPSEITIPPGTQPGSVITLRGRGMPHLRSGGRG 322
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
1-297 2.55e-70

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 221.79  E-value: 2.55e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSqgGGGHGGFGGGADFADMFGDvFGDIFGG 80
Cdd:PRK14285  26 KIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGG--GGFEGFSGGFSGFSDIFED-FGDIFDS 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  81 -----GRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQGFF 155
Cdd:PRK14285 103 fftgnRGQDKNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKSEKGTSPSICNMCNGSGRVMQGGGFF 182
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 156 AVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEHEIFV 235
Cdd:PRK14285 183 RVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKETIELKIPAGIDDNQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFK 262
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 259479073 236 RDGNNLYCEVPISFTAAALGGEIEVPTLDGR-VKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:PRK14285 263 RNGKDLYATLPISFTQAALGKEIKIQTIASKkIKIKIPKGTENDEQIIIKNEGMPILHTEKFG 325
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
1-297 3.41e-67

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 213.89  E-value: 3.41e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDRNQGD-AASEEKFKEVKEAYEVLTDANLRARYDQYGHAG-VDPSQGGGGHGGFGGG--ADFADMFGDVFGD 76
Cdd:PRK14282  27 RLVKEWHPDRHPENrKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGeQPPYQETESGGGFFEDifKDFENIFNRDIFD 106
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  77 IF---GGGRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQV-QMRQ 152
Cdd:PRK14282 107 IFfgeRRTQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGGTGVEPGSGYVTCPKCHGTGRIrEERR 186
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 153 GFFAV---QQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVK 229
Cdd:PRK14282 187 SFFGVfvsERTCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVKIPAGVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVR 266
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 259479073 230 EHEIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVK-LKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:PRK14282 267 PDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEGGTTmLKIPPGTQPETVFRLKGKGLPNMRYGRRG 335
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
1-297 3.88e-66

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 211.29  E-value: 3.88e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDRNQgDAASEEKFKEVKEAYEVLTDANLRARYDQYGHA------GVDPsqgggghgGFGGGADFADMFGDVF 74
Cdd:PRK14292  25 KLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTApgagmpGGDP--------FGGMGFDPMDIFEQLF 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  75 GDIfGGGRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSA-QTCPTCHGSGQVQMR-Q 152
Cdd:PRK14292  96 GGA-GFGGGRGRRGPARGDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPpKTCPTCRGAGAVRAQaR 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 153 GFFAV---QQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSgeGEAGEAGAPAGDLYVQVHVK 229
Cdd:PRK14292 175 TIFGVvetQQPCPTCRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRVA--GMGNEGPGGNGDLYVHIEME 252
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 259479073 230 EHEIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:PRK14292 253 PHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGPQVIEVKPGTQHGDLHRLRGQGMPRLQGAGTG 320
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
1-297 1.52e-60

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 196.71  E-value: 1.52e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDRNQGDAAsEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSQGGGGHGgfgggADFADMF---------- 70
Cdd:PRK14296  27 KLAKQYHPDLNKSPDA-HDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSGFSSNF-----GDFEDLFsnmgssgfss 100
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  71 -GDVFGDIFGGGRGGARRGPARgSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQV- 148
Cdd:PRK14296 101 fTNIFSDFFGSNKSDYQRSTKG-QSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSGAESNSDIHICNNCHGTGEVl 179
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 149 -QMRQGFFAVQQA--CPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQ 225
Cdd:PRK14296 180 vQKNMGFFQFQQSakCNVCNGAGKIIKNKCKNCKGKGKYLERKKIEVNIPKGIRPNQQIKLSQKGHASLNNGVNGDLIID 259
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 259479073 226 VHVKEHEIF-VRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGV-KSVRSGQVG 297
Cdd:PRK14296 260 IYLKESKVFeIINNNDILMTYNISYLDAILGNEIIIKTLDGDIKYKLPKSINSNELIIINNKGLyKSINKDKRG 333
PRK14288 PRK14288
molecular chaperone DnaJ;
1-297 2.81e-59

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 193.37  E-value: 2.81e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSqgggghggFGGGADFADMFGDV---FGDI 77
Cdd:PRK14288  26 KLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQA--------GASQSDFSDFFEDLgsfFEDA 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  78 FGGGRGGARRGPARGS-DLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTgSSAQTCPTCHGSGQVQMRQGFFA 156
Cdd:PRK14288  98 FGFGARGSKRQKSSIApDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKD-KALETCKQCNGQGQVFMRQGFMS 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 157 VQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSgEGEAGEAGAPAGDLYVQVHVKEHEIFVR 236
Cdd:PRK14288 177 FAQTCGACQGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLK-NKGNEYEKGKRGDLYLEARVKEDEHFKR 255
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 259479073 237 DGNNLYCEVPISFTAAALGGEIEVPTLDG-RVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:PRK14288 256 EGCDLFIEAPVFFTTIALGHTIKVPSLKGdELELKIPRNARDRQTFAFRNEGVKHPESSYRG 317
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
2-288 5.16e-58

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 190.14  E-value: 5.16e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   2 LAMKYHPDRNQGDAA-SEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSQGGGGHGGFGGGADFADMFGDVFG----D 76
Cdd:PRK14290  27 LAKKWHPDLHPGNKAeAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSNFNWDNFTHFSDINDIFNQIFGgnfgS 106
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  77 IFGGGRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAqTCPTCHGSGQ--VQMRQGF 154
Cdd:PRK14290 107 DFFSGFGNQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGTGAKNGKLI-TCPTCHGTGQqrIVRGQGF 185
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 155 F--AVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSgeGEAGEAGAPAGDLYVQVHVKEHE 232
Cdd:PRK14290 186 FrmVTVTTCRTCGGRGRIPEEKCPRCNGTGTVVVNEDISVKIPKGATDNLRLRVK--GKGQSYGGRTGDLYVVLRVNNDP 263
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 259479073 233 IFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGV 288
Cdd:PRK14290 264 NIQRINDDLYVDQKINFPQAALGGEIEIKLFREKYNLKIPEGTQPGEVLKIKGAGM 319
DnaJ_C cd10747
C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 ...
93-297 4.36e-54

C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70.


Pssm-ID: 199909 [Multi-domain]  Cd Length: 158  Bit Score: 172.99  E-value: 4.36e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  93 SDLRYTMELTLEEAVRGVSKEIKVPTLVHcevcngsgahtgssaqtcptchgsgqvqmrqgffavqqacphchgrgkiik 172
Cdd:cd10747    1 ADLRYDLELTLEEAYFGKEKEIKIPRKVT--------------------------------------------------- 29
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 173 dpcrkchgegRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEHEIFVRDGNNLYCEVPISFTAA 252
Cdd:cd10747   30 ----------RVREKKTLTVKIPAGVDDGQRLRLRGEGDAGPNGGPPGDLYVVIRVKPHPVFRRDGNDLYCEVPISLTEA 99
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 259479073 253 ALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:cd10747  100 LLGGEIEVPTLGGKVKLKIPPGTQPGTVLRLKGKGMPRLRGGGRG 144
PRK10266 PRK10266
curved DNA-binding protein;
1-290 9.96e-38

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 135.72  E-value: 9.96e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDRNQgDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPS---QGGGGHGGFGGGADFADMFGDVFGdi 77
Cdd:PRK10266  27 RLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQfnrQFQHGDGQSFNAEDFDDIFSSIFG-- 103
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  78 fgggrggarrgpargsdlRYTMELTLEEAVRGVSKEIKVPTLVHcEVCNGsgaHTGSSAQTCPTCHGSGQVQmrqgffav 157
Cdd:PRK10266 104 ------------------QHARQSRQRPAARGHDIEIEVAVFLE-ETLTE---HKRTISYNLPVYNAFGMIE-------- 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 158 qQACPhchgrgkiikdpcrkchgegryqrtKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEHEIFVRD 237
Cdd:PRK10266 154 -QEIP-------------------------KTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIV 207
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 259479073 238 GNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKS 290
Cdd:PRK10266 208 GQDLEIVVPLAPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVS 260
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
1-273 5.00e-33

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 125.32  E-value: 5.00e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDRNqGDaasEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSQgggghggfgGGADFADMFGDVFGdifgg 80
Cdd:PTZ00037  51 KLAIKHHPDKG-GD---PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGE---------QPADASDLFDLIFG----- 112
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  81 gRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAhTGSSAQTCPTCHGSG-QVQMRQGFFAVQQ 159
Cdd:PTZ00037 113 -GGRKPGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGG-PKDAFVDCKLCNGQGiRVQIRQMGSMIHQ 190
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 160 A---CPHCHGRGKII--KDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSgEGEAGEAGAPAGDLYVQVHVKEHEIF 234
Cdd:PTZ00037 191 TqstCNSCNGQGKIIpeSKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFH-GEADEKPNEIPGNVVFILNEKPHDTF 269
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 259479073 235 VRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTP 273
Cdd:PTZ00037 270 KREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTP 308
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
1-287 1.03e-31

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 119.27  E-value: 1.03e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDRNQgDAASEEKFKEVKEAYEVLTDANLRARYDQYGHA-------GVDPSQGGGGHGGFGGGADFADMFGDV 73
Cdd:PRK14299  27 KLARKYHPDVNK-SPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTaasagwqGPPPGPPGGGDFSGFNVGDFSDFFQQL 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  74 FGDI-----FGGGRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVptlvhcevcngsgahtgssaqtcptchgsgqv 148
Cdd:PRK14299 106 FGGRggfggFGDLFGSVGRRARKGRDLEAELPLTLEEAYRGGEKVVEV-------------------------------- 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 149 qmrqgffavqqacphchgrgkiikdpcrkchgEGRyqrtkTLSVKIPAGVDTGDRIRLSgegeagEAGAPAGDLYVQVHV 228
Cdd:PRK14299 154 --------------------------------AGE-----RLSVRIPPGVREGQVIRLA------GKGRQGGDLYLVVRL 190
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 259479073 229 KEHEIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKG 287
Cdd:PRK14299 191 LPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLDGPVEVTIPPRTQAGRKLRLKGKG 249
DnaJ_CXXCXGXG pfam00684
DnaJ central domain; The central cysteine-rich (CR) domain of DnaJ proteins contains four ...
122-182 1.96e-29

DnaJ central domain; The central cysteine-rich (CR) domain of DnaJ proteins contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DNAJ cysteine rich domain and various hydrophobic peptides has been found.


Pssm-ID: 459904 [Multi-domain]  Cd Length: 65  Bit Score: 106.49  E-value: 1.96e-29
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 259479073  122 CEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQ----GFFAVQQACPHCHGRGKIIKDPCRKCHGEG 182
Cdd:pfam00684   1 CPTCNGSGAKPGTKPTTCPTCGGTGQVRRVQqtgpGFFQMQSTCPTCGGTGKIIKDPCKKCKGKG 65
DnaJ_zf cd10719
Zinc finger domain of DnaJ and HSP40; Central/middle or CxxCxGxG-motif containing domain of ...
122-182 1.06e-27

Zinc finger domain of DnaJ and HSP40; Central/middle or CxxCxGxG-motif containing domain of DnaJ/Hsp40 (heat shock protein 40). DnaJ proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonin family. Hsp40 proteins are characterized by the presence of an N-terminal J domain, which mediates the interaction with Hsp70. This central domain contains four repeats of a CxxCxGxG motif and binds to two Zinc ions. It has been implicated in substrate binding.


Pssm-ID: 199908 [Multi-domain]  Cd Length: 65  Bit Score: 101.95  E-value: 1.06e-27
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 259479073 122 CEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQ----GFFAVQQACPHCHGRGKIIKDPCRKCHGEG 182
Cdd:cd10719    1 CPTCNGSGAKPGTKPKTCPTCGGSGQVRQVQgtgfGFFQTQTTCPTCGGTGKIIKDPCPKCKGKG 65
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
1-52 1.44e-23

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 93.61  E-value: 1.44e-23
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 259479073   1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSQ 52
Cdd:COG0484   23 KLAKKYHPDRNPGDPEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLA 74
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
1-290 3.29e-20

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 89.88  E-value: 3.29e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073   1 RLAMKYHPDRNqGDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSqgggghggfgGGADFA--DMFGDVFGDI- 77
Cdd:NF037946  28 KLAKKYHPDRN-KAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGVDGE----------GGFGFDafDVFSSFFETIn 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073  78 ---------------------FGGGRGGARRGPARGSDL-----------RY-------------TMELTLEEAVRGVSK 112
Cdd:NF037946  97 ksgaflddsvdesvsadddldRLFDDSKEPSFTSGLDEIvqfweafignpDYgyydennewnlilDKNLFTPESVIPTKN 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 113 ---EIKVPTLVH----------------CEVCNGSG--AHTGSSAQTCPTCHGSGqVQMRQGFFAVQQACPHC------- 164
Cdd:NF037946 177 tdlVTKKDDIVVenfdnlnettyksivdLLNNETSGtlALKDGNKETINISNPTV-LSKNLEFDEQTEKLDFSklflrkq 255
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 165 ------------------------------------HGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPagvdTGDRIRLSG 208
Cdd:NF037946 256 lprisetevveqpitnlqepnlniiyevkipqillfNNATKRIKYTRNDCKGKSYTKEQITLDIQLP----ITDKLKLSV 331
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 209 EGE---AGEAGAPAGDLYVQVHVKEHEIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRG 285
Cdd:NF037946 332 NYPgfgHIVGSKTKGDLTIVFKVIKSKFFKLKKNDIHTAALVDPLVAYNGGEILVPTPNQLIKVKIDPGTKNNDQIIIKG 411

                 ....*
gi 259479073 286 KGVKS 290
Cdd:NF037946 412 LGLPA 416
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
1-41 2.79e-19

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 79.82  E-value: 2.79e-19
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 259479073    1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYD 41
Cdd:pfam00226  23 KLALKYHPDKNPGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
1-39 7.99e-15

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 67.72  E-value: 7.99e-15
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 259479073   1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRAR 39
Cdd:COG5407   23 KLAKKYHPDRNKGDPKAEERFKEINEAYELLSDAEKRAR 61
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
1-33 2.59e-13

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 63.33  E-value: 2.59e-13
                         10        20        30
                 ....*....|....*....|....*....|...
gi 259479073   1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTD 33
Cdd:cd06257   23 KLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55
DnaJ smart00271
DnaJ molecular chaperone homology domain;
1-33 6.33e-12

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 59.56  E-value: 6.33e-12
                           10        20        30
                   ....*....|....*....|....*....|....
gi 259479073     1 RLAMKYHPDRNQGD-AASEEKFKEVKEAYEVLTD 33
Cdd:smart00271  24 KLALKYHPDKNPGDkEEAEEKFKEINEAYEVLSD 57
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
1-52 5.36e-11

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 58.19  E-value: 5.36e-11
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 259479073   1 RLAMKYHPDRNQGD-AASEEKFKEVKEAYEVLTDANLRARYDQ-YGHAGVDPSQ 52
Cdd:COG2214   28 RLAKLLHPDRGGELkALAEELFQRLNEAYEVLSDPERRAEYDReLGQSGKGSAS 81
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
4-74 3.88e-06

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 47.72  E-value: 3.88e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 259479073   4 MKYHPDRNQ--GDAASEEKFKEVKEAYEVLTDANLRARYDQ-YGHAGVDPSQGGGGHggfgggaDFADMFGDVF 74
Cdd:COG5269   72 YKYHPDKTAagGNKGCDEFFKLIQKAREVLGDRKLRLQYDSnDFDADVPPPRIYTPD-------EFFEVWEPVF 138
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
1-48 1.16e-04

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 43.62  E-value: 1.16e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 259479073    1 RLAMKYHPDRNQGDAASEeKFKEVKEAYEVLTDANLRARYDQYGHAGV 48
Cdd:PTZ00341  596 KLAENYYPPKRSGNEGFH-KFKKINEAYQILGDIDKKKMYNKFGYDGI 642
phage_xxxx TIGR02642
uncharacterized phage protein; This uncharacterized protein is found in prophage regions of ...
137-172 3.35e-04

uncharacterized phage protein; This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q. [Mobile and extrachromosomal element functions, Prophage functions]


Pssm-ID: 274243 [Multi-domain]  Cd Length: 186  Bit Score: 40.63  E-value: 3.35e-04
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 259479073  137 QTCPTCHGSGQVQMRQGffavqqACPHCHGRGKIIK 172
Cdd:TIGR02642 100 CKCPRCRGTGLIQRRQR------ECDTCAGTGRFRP 129
anti-TRAP cd10748
anti-TRAP (AT) protein specific to Bacilli; In Bacillus subtilis and related bacteria, AT ...
157-182 3.30e-03

anti-TRAP (AT) protein specific to Bacilli; In Bacillus subtilis and related bacteria, AT binds to the TRAP protein, (tryptophan-activated trp RNA-binding attenuation protein), effectively disrupting interaction of TRAP with mRNAs. Upon binding of tryptophan, TRAP (which forms a complex of 11 identical subunits) interacts with a specific location in the leader RNA and blocks translation of the tryptophan biosynthetic operon. AT, in turn, recognizes the tryptophan-activated TRAP complex and prevents RNA binding. AT is expressed in response to high levels of uncharged tryptophan tRNA. AT contains a zinc-binding motif that closely resembles the zinc-binding motifs in the zinc-finger region of DnaJ/Hsp40. AT has been shown to form homo-dodecameric assemblies, and can actually do that in two different relative orientations, resulting in two different dodecamers. Recent data suggest that the trimeric form of AT may be the biologically relevant active complex.


Pssm-ID: 199910 [Multi-domain]  Cd Length: 52  Bit Score: 34.90  E-value: 3.30e-03
                         10        20
                 ....*....|....*....|....*.
gi 259479073 157 VQQACPHCHGRGKIIKDPCRKCHGEG 182
Cdd:cd10748    7 LEVTCPKCERAGEEEGTPCPKCSGKG 32
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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