|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10767 |
PRK10767 |
chaperone protein DnaJ; Provisional |
1-297 |
0e+00 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 236757 [Multi-domain] Cd Length: 371 Bit Score: 535.88 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSqggGGHGGFGGGADFADMFGDVFGDIFGG 80
Cdd:PRK10767 27 KLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQG---GGGGGFGGGGGFGDIFGDIFGDIFGG 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 81 GRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQGFFAVQQA 160
Cdd:PRK10767 104 GRGGGRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQQGFFTVQQT 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 161 CPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEHEIFVRDGNN 240
Cdd:PRK10767 184 CPTCHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRIRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGND 263
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 259479073 241 LYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:PRK10767 264 LYCEVPISFTTAALGGEIEVPTLDGRVKLKIPEGTQTGKLFRLRGKGVKSVRSGARG 320
|
|
| DnaJ_bact |
TIGR02349 |
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ... |
1-297 |
1.11e-139 |
|
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Pssm-ID: 274090 [Multi-domain] Cd Length: 354 Bit Score: 398.13 E-value: 1.11e-139
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 1 RLAMKYHPDRNQgDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSQGGGGHGGFGGGADFADMFGDVFGDIFGG 80
Cdd:TIGR02349 23 KLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGGFNGFDIGFFGDFGDIFGDFFGG 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 81 GRGGARRGPARG---SDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQ----G 153
Cdd:TIGR02349 102 GGGSGRRRRSGPrrgEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQgtpfG 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 154 FFAVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEHEI 233
Cdd:TIGR02349 182 FFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKI 261
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 259479073 234 FVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:TIGR02349 262 FERDGNDLYIEVPISFTQAILGGEIEVPTLDGDVKLKIPAGTQSGTVFRLKGKGVPRLRGNGRG 325
|
|
| PRK14277 |
PRK14277 |
chaperone protein DnaJ; Provisional |
1-293 |
1.03e-114 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 184599 [Multi-domain] Cd Length: 386 Bit Score: 336.00 E-value: 1.03e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSQGGGGHGGF----GGGADF-----ADMFG 71
Cdd:PRK14277 28 RLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQGGFGQggfgGGGFDFdfggfGDIFE 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 72 DVFGDIFGGGRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMR 151
Cdd:PRK14277 108 DIFGDFFGTGRRRAETGPQKGADIRYDLELTFEEAAFGTEKEIEVERFEKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTR 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 152 Q----GFFAVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVH 227
Cdd:PRK14277 188 QntpfGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRRKIKVNIPAGIDDGQMITLRGEGEPGIKGGPNGDLYIVIK 267
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 259479073 228 VKEHEIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRS 293
Cdd:PRK14277 268 VKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLDGKVKFTIPEGTQTGTKFRLRGKGIPHLRG 333
|
|
| PRK14294 |
PRK14294 |
chaperone protein DnaJ; Provisional |
1-297 |
4.02e-113 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237664 [Multi-domain] Cd Length: 366 Bit Score: 330.96 E-value: 4.02e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSqgggghgGFGGGADFADMF---GDVFGDI 77
Cdd:PRK14294 27 KLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGT-------GFSGFSGFDDIFssfGDIFEDF 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 78 F---GGGRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQGF 154
Cdd:PRK14294 100 FgfgGGRRGRSRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEPGTSPTTCPQCGGSGQVTQSQGF 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 155 FAVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEHEIF 234
Cdd:PRK14294 180 FSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFF 259
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 259479073 235 VRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:PRK14294 260 ERDGNDVHCKVPISFVQAALGAQIEVPTLEGERELKIPKGTQPGDIFRFKGKGIPSLRGGGRG 322
|
|
| PRK14280 |
PRK14280 |
molecular chaperone DnaJ; |
1-297 |
1.19e-111 |
|
molecular chaperone DnaJ;
Pssm-ID: 237656 [Multi-domain] Cd Length: 376 Bit Score: 327.83 E-value: 1.19e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 1 RLAMKYHPDRNQgDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAgvDPSQGGGGHGGFGGgaDFADMFGdvFGDIFGG 80
Cdd:PRK14280 27 KLSKKYHPDINK-EEGADEKFKEISEAYEVLSDDQKRAQYDQFGHA--GPNQGFGGGGFGGG--DFGGGFG--FEDIFSS 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 81 -----GRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQ--- 152
Cdd:PRK14280 100 ffgggGRRRDPNAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQntp 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 153 -GFFAVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEH 231
Cdd:PRK14280 180 fGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPH 259
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 259479073 232 EIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:PRK14280 260 EFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGKVKLKIPAGTQTGTQFRLKGKGVPNVRGYGQG 325
|
|
| PRK14298 |
PRK14298 |
chaperone protein DnaJ; Provisional |
1-288 |
3.77e-102 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 184612 [Multi-domain] Cd Length: 377 Bit Score: 303.69 E-value: 3.77e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 1 RLAMKYHPDRNQgDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDpsqGGGGHGGFGGGADFADmFGDVFGDIFGG 80
Cdd:PRK14298 28 KLAMKYHPDKNK-EPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGID---NQYSAEDIFRGADFGG-FGDIFEMFFGG 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 81 GRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQV-QMRQ---GFFA 156
Cdd:PRK14298 103 GGRRGRMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSPKRCPTCGGTGQVtTTRStplGQFV 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 157 VQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEHEIFVR 236
Cdd:PRK14298 183 TTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGADSGLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFER 262
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 259479073 237 DGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGV 288
Cdd:PRK14298 263 VGDDIISEIPISFTQAALGADIMVPTLYGKVKMNIPPGTQTHSVFRLKDKGM 314
|
|
| PRK14283 |
PRK14283 |
chaperone protein DnaJ; Provisional |
1-292 |
2.28e-101 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 184604 [Multi-domain] Cd Length: 378 Bit Score: 301.74 E-value: 2.28e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 1 RLAMKYHPDRNQGDAAsEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDP-SQGGGGHGgfgggADFADMF---GDVFGD 76
Cdd:PRK14283 28 KLARKYHPDVSEEEGA-EEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGfSQEDIFNN-----INFEDIFqgfGFGIGN 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 77 IFGGGR--GGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQV-QMRQ- 152
Cdd:PRK14283 102 IFDMFGfgGGSRHGPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPGSEVKTCPTCGGTGQVkQVRNt 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 153 --GFFAVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKE 230
Cdd:PRK14283 182 ilGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRVSGEGEMGDRGGEPGDLYVVIKVKP 261
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 259479073 231 HEIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVR 292
Cdd:PRK14283 262 HKIFRREGANLYYEKPISFVQAALGDTVDVPTIDGPVELKIPAGTQSGTTFRLKGHGMPSLR 323
|
|
| PRK14297 |
PRK14297 |
molecular chaperone DnaJ; |
1-297 |
1.09e-99 |
|
molecular chaperone DnaJ;
Pssm-ID: 184611 [Multi-domain] Cd Length: 380 Bit Score: 297.46 E-value: 1.09e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAgvDPSQGGGGHGGFGGGADFADMFGdvFGDIFGG 80
Cdd:PRK14297 27 KLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTA--DFNGAGGFGSGGFGGFDFSDMGG--FGDIFDS 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 81 -------GRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQ- 152
Cdd:PRK14297 103 ffgggfgSSSRRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKPGTSPKTCDKCGGTGQIRVQRn 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 153 ---GFFAVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVK 229
Cdd:PRK14297 183 tplGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVIPLRGQGEHGKNGGPTGDLYINIRVA 262
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 259479073 230 EHEIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:PRK14297 263 PHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDGEVKYEVPAGTQPGTVFRLKGKGVPRVNSTGRG 330
|
|
| PRK14301 |
PRK14301 |
chaperone protein DnaJ; Provisional |
1-297 |
4.51e-98 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237668 [Multi-domain] Cd Length: 373 Bit Score: 293.19 E-value: 4.51e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSQGGGGHGGFGGG-ADFADMFGDVFGdiFG 79
Cdd:PRK14301 27 KLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGGFGGFSSAEDIfSHFSDIFGDLFG--FS 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 80 GGRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQGFFAVQQ 159
Cdd:PRK14301 105 GGGSRRGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQVRQSQGFFQIAV 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 160 ACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEHEIFVRDGN 239
Cdd:PRK14301 185 PCPVCRGEGRVITHPCPKCKGSGIVQQTRELKVRIPAGVDTGSRLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQ 264
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 259479073 240 NLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:PRK14301 265 DLVVTQEISFVQAALGDRIEVPTLDDPVTLDIPKGTQSGEVFRLRGKGLPYLGSSQKG 322
|
|
| PRK14286 |
PRK14286 |
chaperone protein DnaJ; Provisional |
1-288 |
1.53e-97 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 172774 [Multi-domain] Cd Length: 372 Bit Score: 291.51 E-value: 1.53e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSqggGGHGGFGGGADFADMFGDvFGDIFGG 80
Cdd:PRK14286 27 KLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAG---AGGFGQGAYTDFSDIFGD-FGDIFGD 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 81 ---------GRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMR 151
Cdd:PRK14286 103 ffgggrgggSGGGRRSGPQRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQIRRT 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 152 QGFFAVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEH 231
Cdd:PRK14286 183 QGFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIKIPPGVETGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKH 262
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 259479073 232 EIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGR-VKLKVTPETQTGKMFRMRGKGV 288
Cdd:PRK14286 263 ELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKkAKMKIPEGTESGQVFRLKGHGM 320
|
|
| PRK14276 |
PRK14276 |
chaperone protein DnaJ; Provisional |
1-297 |
8.35e-97 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237653 [Multi-domain] Cd Length: 380 Bit Score: 290.07 E-value: 8.35e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 1 RLAMKYHPDRNQgDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPS--QGGGGHGGFGGGADFADmFGDVFGDIF 78
Cdd:PRK14276 27 KLSKKYHPDINK-EPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGfgGGAGGFGGFDGSGGFGG-FEDIFSSFF 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 79 GGGRGGARRGP-ARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQ----G 153
Cdd:PRK14276 105 GGGGARRNPNApRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAKPGTSPVTCGKCHGSGVITVDTqtplG 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 154 FFAVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEHEI 233
Cdd:PRK14276 185 MMRRQVTCDVCHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVETGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKK 264
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 259479073 234 FVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:PRK14276 265 FERDGSTIYYTLPISFVQAALGDTVEVPTVHGDVELKIPAGTQTGKKFRLRGKGAPKLRGGGNG 328
|
|
| PRK14293 |
PRK14293 |
molecular chaperone DnaJ; |
1-288 |
6.94e-90 |
|
molecular chaperone DnaJ;
Pssm-ID: 237663 [Multi-domain] Cd Length: 374 Bit Score: 272.25 E-value: 6.94e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 1 RLAMKYHPDRNQgDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSQGGgghggfgggADFADM--FGDVFGDIF 78
Cdd:PRK14293 26 RLARKYHPDVNK-EPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAGF---------PDMGDMggFADIFETFF 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 79 -------GGGRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVqmR 151
Cdd:PRK14293 96 sgfggagGQGGRRRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGTGPTTCSTCGGAGQV--R 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 152 Q------GFFAVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQ 225
Cdd:PRK14293 174 RatrtpfGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVSGEGDAGLRGGPPGDLYVY 253
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 259479073 226 VHVKEHEIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGV 288
Cdd:PRK14293 254 LFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGPVELTIPAGTQPNTVLTLENKGV 316
|
|
| PRK14300 |
PRK14300 |
chaperone protein DnaJ; Provisional |
1-293 |
9.17e-88 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 172788 [Multi-domain] Cd Length: 372 Bit Score: 266.88 E-value: 9.17e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 1 RLAMKYHPDR-NQGDAasEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSQGGGGHGGFGG-GADFADMFGDVFGDIF 78
Cdd:PRK14300 26 KLAKQYHPDTtDAKDA--EKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRGGGGNHGGfHPDINDIFGDFFSDFM 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 79 GGGRGGARRGPARG-SDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQGFFAV 157
Cdd:PRK14300 104 GGSRRSRPTSSKVRgSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGETVTTCDACSGVGATRMQQGFFTI 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 158 QQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEHEIFVRD 237
Cdd:PRK14300 184 EQACHKCQGNGQIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRIRHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVD 263
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 259479073 238 GNNLYCEVPISFTAAALGGEIEVPTLD-GRVKLKVTPETQTGKMFRMRGKGVKSVRS 293
Cdd:PRK14300 264 GANLHCKLPISFVNAALGGEIEVPVIEgGKVNLTIPAGTQNGDQLRLRSKGMSKMRS 320
|
|
| DnaJ_C |
pfam01556 |
DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It ... |
95-297 |
2.07e-87 |
|
DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. The two C-terminal domains CTDI and CTDII, both incorporated in this family are necessary for maintaining the J-domains in their specific relative positions. Structural analysis of PDB:1nlt shows that PF00684 is nested within this DnaJ C-terminal region.
Pssm-ID: 460251 [Multi-domain] Cd Length: 213 Bit Score: 259.88 E-value: 2.07e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 95 LRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQGFFAVQQACPHCHGRGKIIKDP 174
Cdd:pfam01556 1 LEYELELTLEEAYFGCTKKIKITRNVICDTCGGSGAKPGTSPKTCPCCGGGGQVRRQFGFFSTCTCCPCCGGGGKIIDKC 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 175 CRKCHGEGRyQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEHEIFVRDGNNLYCEVPISFTAAAL 254
Cdd:pfam01556 81 CKCCGGGGV-VEKKTLEVKIPAGVDDGQRIRLRGEGDAGENGGPPGDLYVVIRVKPHPVFRRDGDDLYCTVPISLTEALL 159
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 259479073 255 GGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:pfam01556 160 GGTIEVPTLDGKVKLKIPAGTQPGTVLRLKGKGMPRLKGGGRG 202
|
|
| PRK14289 |
PRK14289 |
molecular chaperone DnaJ; |
3-293 |
3.12e-86 |
|
molecular chaperone DnaJ;
Pssm-ID: 237660 [Multi-domain] Cd Length: 386 Bit Score: 263.23 E-value: 3.12e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 3 AMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGV-DPSQGGGGHGGFGGGADFADMFGDVF------- 74
Cdd:PRK14289 30 AIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVgGAAGGGGFSGEGMSMEDIFSMFGDIFgghgggf 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 75 GDIFGGGRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQ-- 152
Cdd:PRK14289 110 GGFGGFGGGGSQQRVFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQnt 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 153 --GFFAVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKE 230
Cdd:PRK14289 190 ilGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEP 269
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 259479073 231 HEIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRS 293
Cdd:PRK14289 270 HPELIRDENDLIYNLLLSVPTAALGGAVEVPTIDGKAKVKIEAGTQPGKVLRLRNKGLPSVNG 332
|
|
| PRK14281 |
PRK14281 |
chaperone protein DnaJ; Provisional |
1-297 |
2.91e-83 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237657 [Multi-domain] Cd Length: 397 Bit Score: 255.89 E-value: 2.91e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSQGGGGHGGFGGGAD--------FADMFG- 71
Cdd:PRK14281 26 KLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGGGPGYGGGGGdfndifsaFNDMFGg 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 72 ---------DVFGDIFGGGRGGARRGPA-RGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSaQTCPT 141
Cdd:PRK14281 106 garrgggspFGFEDVFGGGGRRRRASAGiPGTDLKIRLKLTLEEIAKGVEKTLKIKKQVPCKECNGTGSKTGAT-ETCPT 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 142 CHGSGQVqmRQ------GFFAVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEA 215
Cdd:PRK14281 185 CHGSGEV--RQasktmfGQFVNITACPTCGGEGRVVKDRCPACYGEGIKQGEVTVKVTVPAGVQDGNYLTLRGQGNAGPR 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 216 GAPAGDLYVQVHVKEHEIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRSGQ 295
Cdd:PRK14281 263 GGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDGAVKLTIPAGTQPETMLRIPGKGIGHLRGSG 342
|
..
gi 259479073 296 VG 297
Cdd:PRK14281 343 RG 344
|
|
| PRK14291 |
PRK14291 |
chaperone protein DnaJ; Provisional |
1-297 |
1.17e-82 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237661 [Multi-domain] Cd Length: 382 Bit Score: 253.92 E-value: 1.17e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 1 RLAMKYHPDRNQgDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSQGGGGHGGFGGGADFADM----------- 69
Cdd:PRK14291 26 RLARKYHPDFNK-NPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQGQEGFSDFGGGNIediledvfdif 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 70 -FGDVFG-DIFGGGRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQ 147
Cdd:PRK14291 105 gFGDIFGrRRATRERRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCEACGGTGYDPGSGEKVCPTCGGSGE 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 148 VQMRQGFFAVQQACPHCHGRGkIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVH 227
Cdd:PRK14291 185 IYQRGGFFRISQTCPTCGGEG-VLREPCSKCNGRGLVIKKETIKVRIPPGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVK 263
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 259479073 228 VKEHEIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDG-RVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:PRK14291 264 VKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGkKEKVKIPPGTKEGDKIRVPGKGMPRLKGSGYG 334
|
|
| PRK14287 |
PRK14287 |
chaperone protein DnaJ; Provisional |
1-291 |
1.18e-82 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237659 [Multi-domain] Cd Length: 371 Bit Score: 253.78 E-value: 1.18e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 1 RLAMKYHPDRNQGDAAsEEKFKEVKEAYEVLTDANLRARYDQYGHAgvDPSQGGGGHGGfgggADFaDMFGDVFGDIFGG 80
Cdd:PRK14287 27 KLARKYHPDVNKAPDA-EDKFKEVKEAYDTLSDPQKKAHYDQFGHT--DPNQGFGGGGA----GDF-GGFSDIFDMFFGG 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 81 GRGGARRGP-ARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQ----GFF 155
Cdd:PRK14287 99 GGGRRNPNApRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETCSHCGGSGQLNVEQntpfGRV 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 156 AVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEHEIFV 235
Cdd:PRK14287 179 VNRRVCHHCEGTGKIIKQKCATCGGKGKVRKRKKINVKVPAGIDHGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFE 258
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 259479073 236 RDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSV 291
Cdd:PRK14287 259 RDGDDIYCEMPLTFPQVALGDEIEVPTLNGKVKLKIPAGTQTGTSFRLRGKGVPNV 314
|
|
| PRK14295 |
PRK14295 |
molecular chaperone DnaJ; |
1-288 |
3.61e-82 |
|
molecular chaperone DnaJ;
Pssm-ID: 237665 [Multi-domain] Cd Length: 389 Bit Score: 252.85 E-value: 3.61e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQ----YGHAGVDPSQGGGGHGGFGGgaDFADMFG----- 71
Cdd:PRK14295 32 KLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEarslFGNGGFRPGPGGGGGGGFNF--DLGDLFGggaqg 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 72 -----------DVFGDIFGGGRGGARRGPArgSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCP 140
Cdd:PRK14295 110 gggaggggglgDVFGGLFNRGGRRTQPRRG--ADVESEVTLSFTEAIDGATVPLRLTSQAPCPACSGTGAKNGTTPRVCP 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 141 TCHGSGQVQMRQGFFAVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAG 220
Cdd:PRK14295 188 TCSGTGQVSRNSGGFSLSEPCPDCKGRGLIADDPCLVCKGSGRAKSSRTMQVRIPAGVSDGQRIRLRGKGAPGERGGPAG 267
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 259479073 221 DLYVQVHVKEHEIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGR-VKLKVTPETQTGKMFRMRGKGV 288
Cdd:PRK14295 268 DLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPpVTVKLPPGTPNGRVLRVRGKGA 336
|
|
| PRK14279 |
PRK14279 |
molecular chaperone DnaJ; |
1-297 |
2.21e-79 |
|
molecular chaperone DnaJ;
Pssm-ID: 237655 [Multi-domain] Cd Length: 392 Bit Score: 245.80 E-value: 2.21e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQ---------YGHAGVDPSQGGGGHGGFGGGADF--ADM 69
Cdd:PRK14279 32 KLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDEtrrlfagggFGGRRFDGGGGFGGFGTGGDGAEFnlNDL 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 70 F-----------GDVFGDIFGGGRGGARRGP-ARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQ 137
Cdd:PRK14279 112 FdaagrgggggiGDLFGGLFNRGGGSARPSRpRRGNDLETETTLDFVEAAKGVTMPLRLTSPAPCTTCHGSGARPGTSPK 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 138 TCPTCHGSGQVQMRQGFFAVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGA 217
Cdd:PRK14279 192 VCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSIIEDPCEECKGTGVTTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGA 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 218 PAGDLYVQVHVKEHEIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSvRSGQVG 297
Cdd:PRK14279 272 PSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGPVGVKVPAGTADGRILRVRGRGVPK-RSGGAG 350
|
|
| PRK14284 |
PRK14284 |
chaperone protein DnaJ; Provisional |
1-291 |
5.44e-75 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237658 [Multi-domain] Cd Length: 391 Bit Score: 234.74 E-value: 5.44e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSQGGGGHGGFGGGAD----FADMFGDVFG- 75
Cdd:PRK14284 24 KLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFGGAGMGNMEDalrtFMGAFGGEFGg 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 76 --DIFGGGRGGARRGPARGSD---------LRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHG 144
Cdd:PRK14284 104 ggSFFEGLFGGLGEAFGMRGGpagarqgasKKVHITLSFEEAAKGVEKELLVSGYKSCDACSGSGANSSQGIKVCDRCKG 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 145 SGQVQMRQGFFAVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYV 224
Cdd:PRK14284 184 SGQVVQSRGFFSMASTCPECGGEGRVITDPCSVCRGQGRIKDKRSVHVHIPAGVDSGMRLKMEGYGDAGQNGAPAGDLYV 263
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 259479073 225 QVHVKEHEIFVRDGNNLYCEVPISFTAAALGGEIEVPTL--DGRVKLKVTPETQTGKMFRMRGKGVKSV 291
Cdd:PRK14284 264 FIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLlkEGTCRLTIPEGIQSGTILKVRGQGFPNV 332
|
|
| PRK14278 |
PRK14278 |
chaperone protein DnaJ; Provisional |
1-297 |
9.86e-74 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237654 [Multi-domain] Cd Length: 378 Bit Score: 230.71 E-value: 9.86e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 1 RLAMKYHPDRNQGDAAsEEKFKEVKEAYEVLTDANLRARYDQYGhagvDPSQGGGGHGgfgggADFADMFGDvFGDIF-- 78
Cdd:PRK14278 26 KLARELHPDVNPDEEA-QEKFKEISVAYEVLSDPEKRRIVDLGG----DPLESAGGGG-----GGFGGGFGG-LGDVFea 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 79 ----GGGRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQGF 154
Cdd:PRK14278 95 ffggGAASRGPRGRVRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKGTAGDSKPVTCDTCGGRGEVQTVQRS 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 155 FAVQ----QACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKE 230
Cdd:PRK14278 175 FLGQvmtsRPCPTCRGVGEVIPDPCHECAGDGRVRARREITVKIPAGVGDGMRIRLAAQGEVGPGGGPAGDLYVEVHEQP 254
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 259479073 231 HEIFVRDGNNLYCEVPISFTAAALGGEIEVPTL-DGRVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:PRK14278 255 HDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAIlDGPSEITIPPGTQPGSVITLRGRGMPHLRSGGRG 322
|
|
| PRK14285 |
PRK14285 |
chaperone protein DnaJ; Provisional |
1-297 |
2.55e-70 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 172773 [Multi-domain] Cd Length: 365 Bit Score: 221.79 E-value: 2.55e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSqgGGGHGGFGGGADFADMFGDvFGDIFGG 80
Cdd:PRK14285 26 KIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGG--GGFEGFSGGFSGFSDIFED-FGDIFDS 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 81 -----GRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQGFF 155
Cdd:PRK14285 103 fftgnRGQDKNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKSEKGTSPSICNMCNGSGRVMQGGGFF 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 156 AVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEHEIFV 235
Cdd:PRK14285 183 RVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKETIELKIPAGIDDNQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFK 262
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 259479073 236 RDGNNLYCEVPISFTAAALGGEIEVPTLDGR-VKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:PRK14285 263 RNGKDLYATLPISFTQAALGKEIKIQTIASKkIKIKIPKGTENDEQIIIKNEGMPILHTEKFG 325
|
|
| PRK14282 |
PRK14282 |
chaperone protein DnaJ; Provisional |
1-297 |
3.41e-67 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 184603 [Multi-domain] Cd Length: 369 Bit Score: 213.89 E-value: 3.41e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 1 RLAMKYHPDRNQGD-AASEEKFKEVKEAYEVLTDANLRARYDQYGHAG-VDPSQGGGGHGGFGGG--ADFADMFGDVFGD 76
Cdd:PRK14282 27 RLVKEWHPDRHPENrKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGeQPPYQETESGGGFFEDifKDFENIFNRDIFD 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 77 IF---GGGRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQV-QMRQ 152
Cdd:PRK14282 107 IFfgeRRTQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGGTGVEPGSGYVTCPKCHGTGRIrEERR 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 153 GFFAV---QQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVK 229
Cdd:PRK14282 187 SFFGVfvsERTCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVKIPAGVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVR 266
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 259479073 230 EHEIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVK-LKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:PRK14282 267 PDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEGGTTmLKIPPGTQPETVFRLKGKGLPNMRYGRRG 335
|
|
| PRK14292 |
PRK14292 |
chaperone protein DnaJ; Provisional |
1-297 |
3.88e-66 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237662 [Multi-domain] Cd Length: 371 Bit Score: 211.29 E-value: 3.88e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 1 RLAMKYHPDRNQgDAASEEKFKEVKEAYEVLTDANLRARYDQYGHA------GVDPsqgggghgGFGGGADFADMFGDVF 74
Cdd:PRK14292 25 KLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTApgagmpGGDP--------FGGMGFDPMDIFEQLF 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 75 GDIfGGGRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSA-QTCPTCHGSGQVQMR-Q 152
Cdd:PRK14292 96 GGA-GFGGGRGRRGPARGDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPpKTCPTCRGAGAVRAQaR 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 153 GFFAV---QQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSgeGEAGEAGAPAGDLYVQVHVK 229
Cdd:PRK14292 175 TIFGVvetQQPCPTCRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRVA--GMGNEGPGGNGDLYVHIEME 252
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 259479073 230 EHEIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:PRK14292 253 PHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGPQVIEVKPGTQHGDLHRLRGQGMPRLQGAGTG 320
|
|
| PRK14296 |
PRK14296 |
chaperone protein DnaJ; Provisional |
1-297 |
1.52e-60 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237666 [Multi-domain] Cd Length: 372 Bit Score: 196.71 E-value: 1.52e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 1 RLAMKYHPDRNQGDAAsEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSQGGGGHGgfgggADFADMF---------- 70
Cdd:PRK14296 27 KLAKQYHPDLNKSPDA-HDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSGFSSNF-----GDFEDLFsnmgssgfss 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 71 -GDVFGDIFGGGRGGARRGPARgSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAQTCPTCHGSGQV- 148
Cdd:PRK14296 101 fTNIFSDFFGSNKSDYQRSTKG-QSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSGAESNSDIHICNNCHGTGEVl 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 149 -QMRQGFFAVQQA--CPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQ 225
Cdd:PRK14296 180 vQKNMGFFQFQQSakCNVCNGAGKIIKNKCKNCKGKGKYLERKKIEVNIPKGIRPNQQIKLSQKGHASLNNGVNGDLIID 259
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 259479073 226 VHVKEHEIF-VRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGV-KSVRSGQVG 297
Cdd:PRK14296 260 IYLKESKVFeIINNNDILMTYNISYLDAILGNEIIIKTLDGDIKYKLPKSINSNELIIINNKGLyKSINKDKRG 333
|
|
| PRK14288 |
PRK14288 |
molecular chaperone DnaJ; |
1-297 |
2.81e-59 |
|
molecular chaperone DnaJ;
Pssm-ID: 172776 [Multi-domain] Cd Length: 369 Bit Score: 193.37 E-value: 2.81e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSqgggghggFGGGADFADMFGDV---FGDI 77
Cdd:PRK14288 26 KLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQA--------GASQSDFSDFFEDLgsfFEDA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 78 FGGGRGGARRGPARGS-DLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTgSSAQTCPTCHGSGQVQMRQGFFA 156
Cdd:PRK14288 98 FGFGARGSKRQKSSIApDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKD-KALETCKQCNGQGQVFMRQGFMS 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 157 VQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSgEGEAGEAGAPAGDLYVQVHVKEHEIFVR 236
Cdd:PRK14288 177 FAQTCGACQGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLK-NKGNEYEKGKRGDLYLEARVKEDEHFKR 255
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 259479073 237 DGNNLYCEVPISFTAAALGGEIEVPTLDG-RVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:PRK14288 256 EGCDLFIEAPVFFTTIALGHTIKVPSLKGdELELKIPRNARDRQTFAFRNEGVKHPESSYRG 317
|
|
| PRK14290 |
PRK14290 |
chaperone protein DnaJ; Provisional |
2-288 |
5.16e-58 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 172778 [Multi-domain] Cd Length: 365 Bit Score: 190.14 E-value: 5.16e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 2 LAMKYHPDRNQGDAA-SEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSQGGGGHGGFGGGADFADMFGDVFG----D 76
Cdd:PRK14290 27 LAKKWHPDLHPGNKAeAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSNFNWDNFTHFSDINDIFNQIFGgnfgS 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 77 IFGGGRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAHTGSSAqTCPTCHGSGQ--VQMRQGF 154
Cdd:PRK14290 107 DFFSGFGNQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGTGAKNGKLI-TCPTCHGTGQqrIVRGQGF 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 155 F--AVQQACPHCHGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSgeGEAGEAGAPAGDLYVQVHVKEHE 232
Cdd:PRK14290 186 FrmVTVTTCRTCGGRGRIPEEKCPRCNGTGTVVVNEDISVKIPKGATDNLRLRVK--GKGQSYGGRTGDLYVVLRVNNDP 263
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 259479073 233 IFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGV 288
Cdd:PRK14290 264 NIQRINDDLYVDQKINFPQAALGGEIEIKLFREKYNLKIPEGTQPGEVLKIKGAGM 319
|
|
| DnaJ_C |
cd10747 |
C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 ... |
93-297 |
4.36e-54 |
|
C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70.
Pssm-ID: 199909 [Multi-domain] Cd Length: 158 Bit Score: 172.99 E-value: 4.36e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 93 SDLRYTMELTLEEAVRGVSKEIKVPTLVHcevcngsgahtgssaqtcptchgsgqvqmrqgffavqqacphchgrgkiik 172
Cdd:cd10747 1 ADLRYDLELTLEEAYFGKEKEIKIPRKVT--------------------------------------------------- 29
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 173 dpcrkchgegRYQRTKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEHEIFVRDGNNLYCEVPISFTAA 252
Cdd:cd10747 30 ----------RVREKKTLTVKIPAGVDDGQRLRLRGEGDAGPNGGPPGDLYVVIRVKPHPVFRRDGNDLYCEVPISLTEA 99
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 259479073 253 ALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKSVRSGQVG 297
Cdd:cd10747 100 LLGGEIEVPTLGGKVKLKIPPGTQPGTVLRLKGKGMPRLRGGGRG 144
|
|
| PRK10266 |
PRK10266 |
curved DNA-binding protein; |
1-290 |
9.96e-38 |
|
curved DNA-binding protein;
Pssm-ID: 182347 [Multi-domain] Cd Length: 306 Bit Score: 135.72 E-value: 9.96e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 1 RLAMKYHPDRNQgDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPS---QGGGGHGGFGGGADFADMFGDVFGdi 77
Cdd:PRK10266 27 RLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQfnrQFQHGDGQSFNAEDFDDIFSSIFG-- 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 78 fgggrggarrgpargsdlRYTMELTLEEAVRGVSKEIKVPTLVHcEVCNGsgaHTGSSAQTCPTCHGSGQVQmrqgffav 157
Cdd:PRK10266 104 ------------------QHARQSRQRPAARGHDIEIEVAVFLE-ETLTE---HKRTISYNLPVYNAFGMIE-------- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 158 qQACPhchgrgkiikdpcrkchgegryqrtKTLSVKIPAGVDTGDRIRLSGEGEAGEAGAPAGDLYVQVHVKEHEIFVRD 237
Cdd:PRK10266 154 -QEIP-------------------------KTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIV 207
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 259479073 238 GNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKGVKS 290
Cdd:PRK10266 208 GQDLEIVVPLAPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVS 260
|
|
| PTZ00037 |
PTZ00037 |
DnaJ_C chaperone protein; Provisional |
1-273 |
5.00e-33 |
|
DnaJ_C chaperone protein; Provisional
Pssm-ID: 240236 [Multi-domain] Cd Length: 421 Bit Score: 125.32 E-value: 5.00e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 1 RLAMKYHPDRNqGDaasEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSQgggghggfgGGADFADMFGDVFGdifgg 80
Cdd:PTZ00037 51 KLAIKHHPDKG-GD---PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGE---------QPADASDLFDLIFG----- 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 81 gRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVPTLVHCEVCNGSGAhTGSSAQTCPTCHGSG-QVQMRQGFFAVQQ 159
Cdd:PTZ00037 113 -GGRKPGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGG-PKDAFVDCKLCNGQGiRVQIRQMGSMIHQ 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 160 A---CPHCHGRGKII--KDPCRKCHGEGRYQRTKTLSVKIPAGVDTGDRIRLSgEGEAGEAGAPAGDLYVQVHVKEHEIF 234
Cdd:PTZ00037 191 TqstCNSCNGQGKIIpeSKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFH-GEADEKPNEIPGNVVFILNEKPHDTF 269
|
250 260 270
....*....|....*....|....*....|....*....
gi 259479073 235 VRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTP 273
Cdd:PTZ00037 270 KREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTP 308
|
|
| PRK14299 |
PRK14299 |
chaperone protein DnaJ; Provisional |
1-287 |
1.03e-31 |
|
chaperone protein DnaJ; Provisional
Pssm-ID: 237667 [Multi-domain] Cd Length: 291 Bit Score: 119.27 E-value: 1.03e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 1 RLAMKYHPDRNQgDAASEEKFKEVKEAYEVLTDANLRARYDQYGHA-------GVDPSQGGGGHGGFGGGADFADMFGDV 73
Cdd:PRK14299 27 KLARKYHPDVNK-SPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTaasagwqGPPPGPPGGGDFSGFNVGDFSDFFQQL 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 74 FGDI-----FGGGRGGARRGPARGSDLRYTMELTLEEAVRGVSKEIKVptlvhcevcngsgahtgssaqtcptchgsgqv 148
Cdd:PRK14299 106 FGGRggfggFGDLFGSVGRRARKGRDLEAELPLTLEEAYRGGEKVVEV-------------------------------- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 149 qmrqgffavqqacphchgrgkiikdpcrkchgEGRyqrtkTLSVKIPAGVDTGDRIRLSgegeagEAGAPAGDLYVQVHV 228
Cdd:PRK14299 154 --------------------------------AGE-----RLSVRIPPGVREGQVIRLA------GKGRQGGDLYLVVRL 190
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 259479073 229 KEHEIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRGKG 287
Cdd:PRK14299 191 LPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLDGPVEVTIPPRTQAGRKLRLKGKG 249
|
|
| DnaJ_CXXCXGXG |
pfam00684 |
DnaJ central domain; The central cysteine-rich (CR) domain of DnaJ proteins contains four ... |
122-182 |
1.96e-29 |
|
DnaJ central domain; The central cysteine-rich (CR) domain of DnaJ proteins contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DNAJ cysteine rich domain and various hydrophobic peptides has been found.
Pssm-ID: 459904 [Multi-domain] Cd Length: 65 Bit Score: 106.49 E-value: 1.96e-29
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 259479073 122 CEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQ----GFFAVQQACPHCHGRGKIIKDPCRKCHGEG 182
Cdd:pfam00684 1 CPTCNGSGAKPGTKPTTCPTCGGTGQVRRVQqtgpGFFQMQSTCPTCGGTGKIIKDPCKKCKGKG 65
|
|
| DnaJ_zf |
cd10719 |
Zinc finger domain of DnaJ and HSP40; Central/middle or CxxCxGxG-motif containing domain of ... |
122-182 |
1.06e-27 |
|
Zinc finger domain of DnaJ and HSP40; Central/middle or CxxCxGxG-motif containing domain of DnaJ/Hsp40 (heat shock protein 40). DnaJ proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonin family. Hsp40 proteins are characterized by the presence of an N-terminal J domain, which mediates the interaction with Hsp70. This central domain contains four repeats of a CxxCxGxG motif and binds to two Zinc ions. It has been implicated in substrate binding.
Pssm-ID: 199908 [Multi-domain] Cd Length: 65 Bit Score: 101.95 E-value: 1.06e-27
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 259479073 122 CEVCNGSGAHTGSSAQTCPTCHGSGQVQMRQ----GFFAVQQACPHCHGRGKIIKDPCRKCHGEG 182
Cdd:cd10719 1 CPTCNGSGAKPGTKPKTCPTCGGSGQVRQVQgtgfGFFQTQTTCPTCGGTGKIIKDPCPKCKGKG 65
|
|
| DnaJ |
COG0484 |
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ... |
1-52 |
1.44e-23 |
|
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440252 [Multi-domain] Cd Length: 139 Bit Score: 93.61 E-value: 1.44e-23
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 259479073 1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSQ 52
Cdd:COG0484 23 KLAKKYHPDRNPGDPEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLA 74
|
|
| terminal_TopJ |
NF037946 |
terminal organelle assembly protein TopJ; |
1-290 |
3.29e-20 |
|
terminal organelle assembly protein TopJ;
Pssm-ID: 468284 [Multi-domain] Cd Length: 440 Bit Score: 89.88 E-value: 3.29e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 1 RLAMKYHPDRNqGDAASEEKFKEVKEAYEVLTDANLRARYDQYGHAGVDPSqgggghggfgGGADFA--DMFGDVFGDI- 77
Cdd:NF037946 28 KLAKKYHPDRN-KAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGVDGE----------GGFGFDafDVFSSFFETIn 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 78 ---------------------FGGGRGGARRGPARGSDL-----------RY-------------TMELTLEEAVRGVSK 112
Cdd:NF037946 97 ksgaflddsvdesvsadddldRLFDDSKEPSFTSGLDEIvqfweafignpDYgyydennewnlilDKNLFTPESVIPTKN 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 113 ---EIKVPTLVH----------------CEVCNGSG--AHTGSSAQTCPTCHGSGqVQMRQGFFAVQQACPHC------- 164
Cdd:NF037946 177 tdlVTKKDDIVVenfdnlnettyksivdLLNNETSGtlALKDGNKETINISNPTV-LSKNLEFDEQTEKLDFSklflrkq 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 165 ------------------------------------HGRGKIIKDPCRKCHGEGRYQRTKTLSVKIPagvdTGDRIRLSG 208
Cdd:NF037946 256 lprisetevveqpitnlqepnlniiyevkipqillfNNATKRIKYTRNDCKGKSYTKEQITLDIQLP----ITDKLKLSV 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259479073 209 EGE---AGEAGAPAGDLYVQVHVKEHEIFVRDGNNLYCEVPISFTAAALGGEIEVPTLDGRVKLKVTPETQTGKMFRMRG 285
Cdd:NF037946 332 NYPgfgHIVGSKTKGDLTIVFKVIKSKFFKLKKNDIHTAALVDPLVAYNGGEILVPTPNQLIKVKIDPGTKNNDQIIIKG 411
|
....*
gi 259479073 286 KGVKS 290
Cdd:NF037946 412 LGLPA 416
|
|
| DnaJ |
pfam00226 |
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ... |
1-41 |
2.79e-19 |
|
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.
Pssm-ID: 395170 [Multi-domain] Cd Length: 63 Bit Score: 79.82 E-value: 2.79e-19
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 259479073 1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRARYD 41
Cdd:pfam00226 23 KLALKYHPDKNPGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
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| SEC63 |
COG5407 |
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ... |
1-39 |
7.99e-15 |
|
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 444165 [Multi-domain] Cd Length: 61 Bit Score: 67.72 E-value: 7.99e-15
10 20 30
....*....|....*....|....*....|....*....
gi 259479073 1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTDANLRAR 39
Cdd:COG5407 23 KLAKKYHPDRNKGDPKAEERFKEINEAYELLSDAEKRAR 61
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| DnaJ |
cd06257 |
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ... |
1-33 |
2.59e-13 |
|
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Pssm-ID: 99751 [Multi-domain] Cd Length: 55 Bit Score: 63.33 E-value: 2.59e-13
10 20 30
....*....|....*....|....*....|...
gi 259479073 1 RLAMKYHPDRNQGDAASEEKFKEVKEAYEVLTD 33
Cdd:cd06257 23 KLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55
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| DnaJ |
smart00271 |
DnaJ molecular chaperone homology domain; |
1-33 |
6.33e-12 |
|
DnaJ molecular chaperone homology domain;
Pssm-ID: 197617 [Multi-domain] Cd Length: 60 Bit Score: 59.56 E-value: 6.33e-12
10 20 30
....*....|....*....|....*....|....
gi 259479073 1 RLAMKYHPDRNQGD-AASEEKFKEVKEAYEVLTD 33
Cdd:smart00271 24 KLALKYHPDKNPGDkEEAEEKFKEINEAYEVLSD 57
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| CbpA |
COG2214 |
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription]; |
1-52 |
5.36e-11 |
|
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
Pssm-ID: 441816 [Multi-domain] Cd Length: 91 Bit Score: 58.19 E-value: 5.36e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 259479073 1 RLAMKYHPDRNQGD-AASEEKFKEVKEAYEVLTDANLRARYDQ-YGHAGVDPSQ 52
Cdd:COG2214 28 RLAKLLHPDRGGELkALAEELFQRLNEAYEVLSDPERRAEYDReLGQSGKGSAS 81
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|
| ZUO1 |
COG5269 |
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ... |
4-74 |
3.88e-06 |
|
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 227594 [Multi-domain] Cd Length: 379 Bit Score: 47.72 E-value: 3.88e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 259479073 4 MKYHPDRNQ--GDAASEEKFKEVKEAYEVLTDANLRARYDQ-YGHAGVDPSQGGGGHggfgggaDFADMFGDVF 74
Cdd:COG5269 72 YKYHPDKTAagGNKGCDEFFKLIQKAREVLGDRKLRLQYDSnDFDADVPPPRIYTPD-------EFFEVWEPVF 138
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| PTZ00341 |
PTZ00341 |
Ring-infected erythrocyte surface antigen; Provisional |
1-48 |
1.16e-04 |
|
Ring-infected erythrocyte surface antigen; Provisional
Pssm-ID: 173534 [Multi-domain] Cd Length: 1136 Bit Score: 43.62 E-value: 1.16e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 259479073 1 RLAMKYHPDRNQGDAASEeKFKEVKEAYEVLTDANLRARYDQYGHAGV 48
Cdd:PTZ00341 596 KLAENYYPPKRSGNEGFH-KFKKINEAYQILGDIDKKKMYNKFGYDGI 642
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|
| phage_xxxx |
TIGR02642 |
uncharacterized phage protein; This uncharacterized protein is found in prophage regions of ... |
137-172 |
3.35e-04 |
|
uncharacterized phage protein; This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q. [Mobile and extrachromosomal element functions, Prophage functions]
Pssm-ID: 274243 [Multi-domain] Cd Length: 186 Bit Score: 40.63 E-value: 3.35e-04
10 20 30
....*....|....*....|....*....|....*.
gi 259479073 137 QTCPTCHGSGQVQMRQGffavqqACPHCHGRGKIIK 172
Cdd:TIGR02642 100 CKCPRCRGTGLIQRRQR------ECDTCAGTGRFRP 129
|
|
| anti-TRAP |
cd10748 |
anti-TRAP (AT) protein specific to Bacilli; In Bacillus subtilis and related bacteria, AT ... |
157-182 |
3.30e-03 |
|
anti-TRAP (AT) protein specific to Bacilli; In Bacillus subtilis and related bacteria, AT binds to the TRAP protein, (tryptophan-activated trp RNA-binding attenuation protein), effectively disrupting interaction of TRAP with mRNAs. Upon binding of tryptophan, TRAP (which forms a complex of 11 identical subunits) interacts with a specific location in the leader RNA and blocks translation of the tryptophan biosynthetic operon. AT, in turn, recognizes the tryptophan-activated TRAP complex and prevents RNA binding. AT is expressed in response to high levels of uncharged tryptophan tRNA. AT contains a zinc-binding motif that closely resembles the zinc-binding motifs in the zinc-finger region of DnaJ/Hsp40. AT has been shown to form homo-dodecameric assemblies, and can actually do that in two different relative orientations, resulting in two different dodecamers. Recent data suggest that the trimeric form of AT may be the biologically relevant active complex.
Pssm-ID: 199910 [Multi-domain] Cd Length: 52 Bit Score: 34.90 E-value: 3.30e-03
10 20
....*....|....*....|....*.
gi 259479073 157 VQQACPHCHGRGKIIKDPCRKCHGEG 182
Cdd:cd10748 7 LEVTCPKCERAGEEEGTPCPKCSGKG 32
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