polyprotein, partial [Hepacivirus hominis]
List of domain hits
Name | Accession | Description | Interval | E-value | ||
HCV_env super family | cl03255 | Hepatitis C virus envelope glycoprotein E1; |
1-55 | 3.65e-28 | ||
Hepatitis C virus envelope glycoprotein E1; The actual alignment was detected with superfamily member pfam01539: Pssm-ID: 110536 Cd Length: 190 Bit Score: 99.95 E-value: 3.65e-28
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HCV_NS1 super family | cl03263 | Hepatitis C virus non-structural protein E2/NS1; The hypervariable region of the E2/NS1 region ... |
59-88 | 4.13e-09 | ||
Hepatitis C virus non-structural protein E2/NS1; The hypervariable region of the E2/NS1 region of hepatitis C virus varies greatly between viral isolates. E2 is thought to encode a structurally unconstrained envelope protein. The actual alignment was detected with superfamily member pfam01560: Pssm-ID: 110557 Cd Length: 344 Bit Score: 51.39 E-value: 4.13e-09
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Name | Accession | Description | Interval | E-value | ||
HCV_env | pfam01539 | Hepatitis C virus envelope glycoprotein E1; |
1-55 | 3.65e-28 | ||
Hepatitis C virus envelope glycoprotein E1; Pssm-ID: 110536 Cd Length: 190 Bit Score: 99.95 E-value: 3.65e-28
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HCV_NS1 | pfam01560 | Hepatitis C virus non-structural protein E2/NS1; The hypervariable region of the E2/NS1 region ... |
59-88 | 4.13e-09 | ||
Hepatitis C virus non-structural protein E2/NS1; The hypervariable region of the E2/NS1 region of hepatitis C virus varies greatly between viral isolates. E2 is thought to encode a structurally unconstrained envelope protein. Pssm-ID: 110557 Cd Length: 344 Bit Score: 51.39 E-value: 4.13e-09
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Name | Accession | Description | Interval | E-value | ||
HCV_env | pfam01539 | Hepatitis C virus envelope glycoprotein E1; |
1-55 | 3.65e-28 | ||
Hepatitis C virus envelope glycoprotein E1; Pssm-ID: 110536 Cd Length: 190 Bit Score: 99.95 E-value: 3.65e-28
|
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HCV_NS1 | pfam01560 | Hepatitis C virus non-structural protein E2/NS1; The hypervariable region of the E2/NS1 region ... |
59-88 | 4.13e-09 | ||
Hepatitis C virus non-structural protein E2/NS1; The hypervariable region of the E2/NS1 region of hepatitis C virus varies greatly between viral isolates. E2 is thought to encode a structurally unconstrained envelope protein. Pssm-ID: 110557 Cd Length: 344 Bit Score: 51.39 E-value: 4.13e-09
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Blast search parameters | ||||
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