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Conserved domains on  [gi|47220248|emb|CAG03282|]
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unnamed protein product, partial [Tetraodon nigroviridis]

Protein Classification

G protein-coupled receptor family protein; olfactory receptor( domain architecture ID 11606998)

G protein-coupled receptor family protein is a seven-transmembrane G protein-coupled receptor (7TM-GPCR) family protein which typically transmits an extracellular signal into the cell by the conformational rearrangement of the 7TM helices and by the subsequent binding and activation of an intracellular heterotrimeric G protein; GPCR ligands include light-sensitive compounds, odors, pheromones, hormones, and neurotransmitters; olfactory receptor plays a central role in olfaction or the sense of smell, similar to human family 6 olfactory receptors; belongs to the class A rhodopsin-like family of G protein-coupled receptors; binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf)

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tmA_GPR26_GPR78-like cd15219
G protein-coupled receptors 26 and 78, member of the class A family of seven-transmembrane G ...
8-307 9.31e-135

G protein-coupled receptors 26 and 78, member of the class A family of seven-transmembrane G protein-coupled receptors; Orphan G-protein coupled receptor 26 (GPR26) and GPR78 are constitutively active and coupled to increased cAMP formation. They are closely related based on sequence homology and comprise a conserved subgroup within the class A G-protein coupled receptor (GPCR) superfamily. Both receptors are widely expressed in selected tissues of the brain but their endogenous ligands are unknown. GPR26 knockout mice showed increased levels of anxiety- and depression-like behaviors, whereas GPR78 has been implicated in susceptibility to bipolar affective disorder and schizophrenia. Members of this subgroup contain the highly conserved Asp-Arg-Tyr/Phe (DRY/F) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors which is important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


:

Pssm-ID: 320347 [Multi-domain]  Cd Length: 264  Bit Score: 382.96  E-value: 9.31e-135
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRSHVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAE 87
Cdd:cd15219   1 LLAVLLVVVLVVSLLSNLLVLLCFLYSAELRKQVPGIFLLNLSFCNLLLTVLNMPFTLLGVVRNRQPFGDGFCQAVGFLE 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGYSHTYASCTVHLEDGSRL 167
Cdd:cd15219  81 TFLTSNAMLSMAALSIDRWIAVVFPLSYTSKMRYRDAALMVGYSWLHSLTFSLVALFLSWLGYSSLYASCTLHLPREEER 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 168 APYAAFTALFHSSSFLLCLLVLCFAYLKVLRVarshckridvitvqtllllvdihpsvkerclaqqkKRRQRATKKICIF 247
Cdd:cd15219 161 RRFAVFTAFFHAFTFLLSLLVLCVTYLKVLKV-----------------------------------RRRQRATKKISIF 205
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 248 IGSFVLCFSPYVVTRqLVELIPSVHIPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRKVL 307
Cdd:cd15219 206 IGTFVLCFAPYVITR-LVELLPFVTINRYWGIVSKCLTYSKAASDPFVYSLLRQQYRKVL 264
 
Name Accession Description Interval E-value
7tmA_GPR26_GPR78-like cd15219
G protein-coupled receptors 26 and 78, member of the class A family of seven-transmembrane G ...
8-307 9.31e-135

G protein-coupled receptors 26 and 78, member of the class A family of seven-transmembrane G protein-coupled receptors; Orphan G-protein coupled receptor 26 (GPR26) and GPR78 are constitutively active and coupled to increased cAMP formation. They are closely related based on sequence homology and comprise a conserved subgroup within the class A G-protein coupled receptor (GPCR) superfamily. Both receptors are widely expressed in selected tissues of the brain but their endogenous ligands are unknown. GPR26 knockout mice showed increased levels of anxiety- and depression-like behaviors, whereas GPR78 has been implicated in susceptibility to bipolar affective disorder and schizophrenia. Members of this subgroup contain the highly conserved Asp-Arg-Tyr/Phe (DRY/F) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors which is important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320347 [Multi-domain]  Cd Length: 264  Bit Score: 382.96  E-value: 9.31e-135
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRSHVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAE 87
Cdd:cd15219   1 LLAVLLVVVLVVSLLSNLLVLLCFLYSAELRKQVPGIFLLNLSFCNLLLTVLNMPFTLLGVVRNRQPFGDGFCQAVGFLE 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGYSHTYASCTVHLEDGSRL 167
Cdd:cd15219  81 TFLTSNAMLSMAALSIDRWIAVVFPLSYTSKMRYRDAALMVGYSWLHSLTFSLVALFLSWLGYSSLYASCTLHLPREEER 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 168 APYAAFTALFHSSSFLLCLLVLCFAYLKVLRVarshckridvitvqtllllvdihpsvkerclaqqkKRRQRATKKICIF 247
Cdd:cd15219 161 RRFAVFTAFFHAFTFLLSLLVLCVTYLKVLKV-----------------------------------RRRQRATKKISIF 205
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 248 IGSFVLCFSPYVVTRqLVELIPSVHIPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRKVL 307
Cdd:cd15219 206 IGTFVLCFAPYVITR-LVELLPFVTINRYWGIVSKCLTYSKAASDPFVYSLLRQQYRKVL 264
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
24-261 1.04e-21

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 91.98  E-value: 1.04e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248    24 NLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFL-GVAENGKPFGDPFCQAASFAETFLTTNAMLSMAALS 102
Cdd:pfam00001   2 NLLVILVILRNKKLRT-PTNIFLLNLAVADLLFSLLTLPFWLVyYLNHGDWPFGSALCKIVGALFVVNGYASILLLTAIS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   103 VDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGYSHTYASCTVHLEDGSRLAPYAAFTALFHSSSF 182
Cdd:pfam00001  81 IDRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSLPPLLFGWTLTVPEGNVTVCFIDFPEDLSKPVSYTLLISVLGF 160
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 47220248   183 LLCLLVLCFAYLKVLRVARSHCKRIDVitvqtllllvdihpsvkerclAQQKKRRQRATKKICIFIGSFVLCFSPYVVT 261
Cdd:pfam00001 161 LLPLLVILVCYTLIIRTLRKSASKQKS---------------------SERTQRRRKALKTLAVVVVVFILCWLPYHIV 218
PHA03087 PHA03087
G protein-coupled chemokine receptor-like protein; Provisional
7-136 2.02e-03

G protein-coupled chemokine receptor-like protein; Provisional


Pssm-ID: 222976 [Multi-domain]  Cd Length: 335  Bit Score: 39.38  E-value: 2.02e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248    7 FLLEVCVLVTAVVSLLTNLSVL--LCYCQSSElrshVPGIFILNLSFSNILLAAINMPTTFLGVAENGKpFGDPFCQAAS 84
Cdd:PHA03087  41 TILIVVYSTIFFFGLVGNIIVIyvLTKTKIKT----PMDIYLLNLAVSDLLFVMTLPFQIYYYILFQWS-FGEFACKIVS 115
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 47220248   85 FAETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSL 136
Cdd:PHA03087 116 GLYYIGFYNSMNFITVMSVDRYIAIVHPVKSNKINTVKYGYIVSLVIWIISI 167
 
Name Accession Description Interval E-value
7tmA_GPR26_GPR78-like cd15219
G protein-coupled receptors 26 and 78, member of the class A family of seven-transmembrane G ...
8-307 9.31e-135

G protein-coupled receptors 26 and 78, member of the class A family of seven-transmembrane G protein-coupled receptors; Orphan G-protein coupled receptor 26 (GPR26) and GPR78 are constitutively active and coupled to increased cAMP formation. They are closely related based on sequence homology and comprise a conserved subgroup within the class A G-protein coupled receptor (GPCR) superfamily. Both receptors are widely expressed in selected tissues of the brain but their endogenous ligands are unknown. GPR26 knockout mice showed increased levels of anxiety- and depression-like behaviors, whereas GPR78 has been implicated in susceptibility to bipolar affective disorder and schizophrenia. Members of this subgroup contain the highly conserved Asp-Arg-Tyr/Phe (DRY/F) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors which is important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320347 [Multi-domain]  Cd Length: 264  Bit Score: 382.96  E-value: 9.31e-135
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRSHVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAE 87
Cdd:cd15219   1 LLAVLLVVVLVVSLLSNLLVLLCFLYSAELRKQVPGIFLLNLSFCNLLLTVLNMPFTLLGVVRNRQPFGDGFCQAVGFLE 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGYSHTYASCTVHLEDGSRL 167
Cdd:cd15219  81 TFLTSNAMLSMAALSIDRWIAVVFPLSYTSKMRYRDAALMVGYSWLHSLTFSLVALFLSWLGYSSLYASCTLHLPREEER 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 168 APYAAFTALFHSSSFLLCLLVLCFAYLKVLRVarshckridvitvqtllllvdihpsvkerclaqqkKRRQRATKKICIF 247
Cdd:cd15219 161 RRFAVFTAFFHAFTFLLSLLVLCVTYLKVLKV-----------------------------------RRRQRATKKISIF 205
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 248 IGSFVLCFSPYVVTRqLVELIPSVHIPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRKVL 307
Cdd:cd15219 206 IGTFVLCFAPYVITR-LVELLPFVTINRYWGIVSKCLTYSKAASDPFVYSLLRQQYRKVL 264
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
11-299 2.76e-36

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 131.64  E-value: 2.76e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  11 VCVLVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFL 90
Cdd:cd00637   3 VLYILIFVVGLVGNLLVILVILRNRRLRT-VTNYFILNLAVADLLVGLLVIPFSLVSLLLGRWWFGDALCKLLGFLQSVS 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  91 TTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGYSHTYASCTVHLEDGSRLAPY 170
Cdd:cd00637  82 LLASILTLTAISVDRYLAIVHPLRYRRRFTRRRAKLLIALIWLLSLLLALPPLLGWGVYDYGGYCCCCLCWPDLTLSKAY 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 171 AAFTALFhssSFLLCLLVLCFAYLKVLRVARSHCKRidvitvqtllllvdIHPSVKERCLAQQKKRRQRATKKICIFIGS 250
Cdd:cd00637 162 TIFLFVL---LFLLPLLVIIVCYVRIFRKLRRHRRR--------------IRSSSSNSSRRRRRRRERKVTKTLLIVVVV 224
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|
gi 47220248 251 FVLCFSPYVVTRQLVELIPS-VHIPRYWGVTTKCLTYAKTSTDAFVYCLL 299
Cdd:cd00637 225 FLLCWLPYFILLLLDVFGPDpSPLPRILYFLALLLAYLNSAINPIIYAFF 274
7tmA_Opsins_type2_animals cd14969
type 2 opsins in animals, member of the class A family of seven-transmembrane G ...
11-307 1.93e-27

type 2 opsins in animals, member of the class A family of seven-transmembrane G protein-coupled receptors; This rhodopsin family represents the type 2 opsins found in vertebrates and invertebrates except sponge. Type 2 opsins primarily function as G protein coupled receptors and are responsible for vision as well as for circadian rhythm and pigment regulation. On the contrary, type 1 opsins such as bacteriorhodopsin and proteorhodopsin are found in both prokaryotic and eukaryotic microbes, functioning as light-gated ion channels, proton pumps, sensory receptors and in other unknown functions. Although these two opsin types share seven-transmembrane domain topology and a conserved lysine reside in the seventh helix, type 1 opsins do not activate G-proteins and are not evolutionarily related to type 2. Type 2 opsins can be classified into six distinct subfamilies including the vertebrate opsins/encephalopsins, the G(o) opsins, the G(s) opsins, the invertebrate G(q) opsins, the photoisomerases, and the neuropsins.


Pssm-ID: 381741 [Multi-domain]  Cd Length: 284  Bit Score: 108.06  E-value: 1.93e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  11 VCVLVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFL 90
Cdd:cd14969   5 VYLSLIGVLGVVLNGLVIIVFLKKKKLRT-PLNLFLLNLALADLLMSVVGYPLSFYSNLSGRWSFGDPGCVIYGFAVTFL 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  91 TTNAMLSMAALSVDRWIAVVFPLSYsSKMRYRDALLMVAYSWLQSLGFSLTQLLmNWGGYSH--TYASCTVHLEDGSRLA 168
Cdd:cd14969  84 GLVSISTLAALAFERYLVIVRPLKA-FRLSKRRALILIAFIWLYGLFWALPPLF-GWSSYVPegGGTSCSVDWYSKDPNS 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 169 P---YAAFTALFhsssfLLCLLVLCFAYLKVLRVARSHCKRIDvitvqtllllvdihPSVKERCLAQQKKRRQRATKKIC 245
Cdd:cd14969 162 LsyiVSLFVFCF-----FLPLAIIIFCYYKIYRTLRKMSKRAA--------------RRKNSAITKRTKKAEKKVAKMVL 222
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47220248 246 IFIGSFVLCFSPYVVTRQLVELIPSVHIPryWGVTTKCLTYAKTST--DAFVYCLLRQQYRKVL 307
Cdd:cd14969 223 VMIVAFLIAWTPYAVVSLYVSFGGESTIP--PLLATIPALFAKSSTiyNPIIYVFMNKQFRRAL 284
7tmA_amine_R-like cd14967
amine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
11-307 2.90e-24

amine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Amine receptors of the class A family of GPCRs include adrenoceptors, 5-HT (serotonin) receptors, muscarinic cholinergic receptors, dopamine receptors, histamine receptors, and trace amine receptors. The receptors of amine subfamily are major therapeutic targets for the treatment of neurological disorders and psychiatric diseases. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320098 [Multi-domain]  Cd Length: 259  Bit Score: 99.17  E-value: 2.90e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  11 VCVLVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFL 90
Cdd:cd14967   4 VFLSLIILVTVFGNLLVILAVYRNRRLRT-VTNYFIVSLAVADLLVALLVMPFSAVYTLLGYWPFGPVLCRFWIALDVLC 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  91 TTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGYSHTYASCTVHLEDGSRLAPY 170
Cdd:cd14967  83 CTASILNLCAISLDRYLAITRPLRYRQLMTKKRALIMIAAVWVYSLLISLPPLVGWRDETQPSVVDCECEFTPNKIYVLV 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 171 AAFTALFhsssflLCLLVLCFAYLKVLRVARSHckridvitvqtllllvdihpsvkerclaqqkkrrQRATKKICIFIGS 250
Cdd:cd14967 163 SSVISFF------IPLLIMIVLYARIFRVARRE----------------------------------LKAAKTLAIIVGA 202
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 47220248 251 FVLCFSPYVVTRQLVELIPSVHIPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRKVL 307
Cdd:cd14967 203 FLLCWLPFFIIYLVSAFCPPDCVPPILYAVFFWLGYLNSALNPIIYALFNRDFRRAF 259
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
24-261 1.04e-21

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 91.98  E-value: 1.04e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248    24 NLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFL-GVAENGKPFGDPFCQAASFAETFLTTNAMLSMAALS 102
Cdd:pfam00001   2 NLLVILVILRNKKLRT-PTNIFLLNLAVADLLFSLLTLPFWLVyYLNHGDWPFGSALCKIVGALFVVNGYASILLLTAIS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   103 VDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGYSHTYASCTVHLEDGSRLAPYAAFTALFHSSSF 182
Cdd:pfam00001  81 IDRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSLPPLLFGWTLTVPEGNVTVCFIDFPEDLSKPVSYTLLISVLGF 160
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 47220248   183 LLCLLVLCFAYLKVLRVARSHCKRIDVitvqtllllvdihpsvkerclAQQKKRRQRATKKICIFIGSFVLCFSPYVVT 261
Cdd:pfam00001 161 LLPLLVILVCYTLIIRTLRKSASKQKS---------------------SERTQRRRKALKTLAVVVVVFILCWLPYHIV 218
7tmA_Melanopsin-like cd15083
vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane ...
8-307 6.16e-18

vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represent the Gq-coupled rhodopsin subfamily consists of melanopsins, insect photoreceptors R1-R6, invertebrate Gq opsins as well as their closely related opsins. Melanopsins (also called Opsin-4) are the primary photoreceptor molecules for non-visual functions such as the photo-entrainment of the circadian rhythm and pupillary constriction in mammals. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. The outer photoreceptors (R1-R6) are the insect Drosophila equivalent to the vertebrate rods and are responsible for image formation and motion detection. The invertebrate G(q) opsins includes the arthropod and mollusk visual opsins as well as invertebrate melanopsins, which are also found in vertebrates. Arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. Members of this subfamily belong to the class A of the G protein-coupled receptors and have seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320211 [Multi-domain]  Cd Length: 291  Bit Score: 82.38  E-value: 6.16e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRShvPG-IFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFA 86
Cdd:cd15083   2 VLGIFILIIGLIGVVGNGLVIYAFCRFKSLRT--PAnYLIINLAISDFLMCILNCPLMVISSFSGRWIFGKTGCDMYGFS 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  87 ETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLmNWGGYS--HTYASCT---VHL 161
Cdd:cd15083  80 GGLFGIMSINTLAAIAVDRYLVITRPMKASVRISHRRALIVIAVVWLYSLLWVLPPLF-GWSRYVleGLLTSCSfdyLSR 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 162 EDGSRLAPYAAFTALFhsssfLLCLLVLCFAYLKVLRVARSHCKRIDVITVQTllllvdihpSVKERCLAQQKKRRQRAT 241
Cdd:cd15083 159 DDANRSYVICLLIFGF-----VLPLLIIIYCYSFIFRAVRRHEKAMKEMAKRF---------SKSELSSPKARRQAEVKT 224
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 47220248 242 KKICIFIGS-FVLCFSPYVVTRQLVELIPSVHIPRYWGVTTKCLtyAKTST--DAFVYCLLRQQYRKVL 307
Cdd:cd15083 225 AKIALLLVLlFCLAWTPYAVVALIGQFGYLEVLTPLATAIPAAF--AKTSAiyNPVIYAFSHPKFRRAL 291
7tmA_Melanopsin cd15336
vertebrate melanopsins (Opsin-4), member of the class A family of seven-transmembrane G ...
12-260 1.06e-15

vertebrate melanopsins (Opsin-4), member of the class A family of seven-transmembrane G protein-coupled receptors; Melanopsin (also called Opsin-4) is the G protein-coupled photopigment that mediates non-visual responses to light. In mammals, these photoresponses include the photo-entrainment of circadian rhythm, pupillary constriction, and acute nocturnal melatonin suppression. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. Melanopsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320458 [Multi-domain]  Cd Length: 290  Bit Score: 75.91  E-value: 1.06e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  12 CVLVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLT 91
Cdd:cd15336   6 VILIIGITGMLGNALVIYAFCRSKKLRT-PANYFIINLAVSDFLMSLTQSPIFFVNSLHKRWIFGEKGCELYAFCGALFG 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  92 TNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQlLMNWGGY--SHTYASCTvhLEDGSRLAP 169
Cdd:cd15336  85 ITSMITLLAISLDRYLVITKPLASIRWVSKKRAMIIILLVWLYSLAWSLPP-LFGWSAYvpEGLLTSCT--WDYMTFTPS 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 170 YAAFTALFHSSSFLLCLLVLCFAYLKVLRVARSHCKRIDVITVQTllllvdihpsVKERCLAQQKKRRQRATKKIC-IFI 248
Cdd:cd15336 162 VRAYTMLLFCFVFFIPLGIIIYCYLFIFLAIRSTGREVQKLGSQD----------RKEKAKQYQRMKNEWKMAKIAfVVI 231
                       250
                ....*....|..
gi 47220248 249 GSFVLCFSPYVV 260
Cdd:cd15336 232 LLFVLSWSPYAC 243
7tmA_TAARs cd15055
trace amine-associated receptors, member of the class A family of seven-transmembrane G ...
44-261 1.47e-15

trace amine-associated receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptors (TAARs) are a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320183 [Multi-domain]  Cd Length: 285  Bit Score: 75.28  E-value: 1.47e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  44 IFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRD 123
Cdd:cd15055  37 LLLLSLAVADFLVGLLVMPFSMIRSIETCWYFGDTFCKLHSSLDYILTSASIFNLVLIAIDRYVAVCDPLLYPTKITIRR 116
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 124 ALLMVAYSWLQSLGFSLTQLLMN-----WGGYSHTYASCTVHLedgsrLAPYAAFTALFhssSFLLCLLVLCFAYLKVLR 198
Cdd:cd15055 117 VKICICLCWFVSALYSSVLLYDNlnqpgLIRYNSCYGECVVVV-----NFIWGVVDLVL---TFILPCTVMIVLYMRIFV 188
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47220248 199 VARSHCKRIDVITVQTllllvdihpSVKERCLAQQKKRRQRATKKICIFIGSFVLCFSPYVVT 261
Cdd:cd15055 189 VARSQARAIRSHTAQV---------SLEGSSKKVSKKSERKAAKTLGIVVGVFLLCWLPYYIV 242
7tmA_NPYR-like cd15203
neuropeptide Y receptors and related proteins, member of the class A family of ...
18-307 1.11e-14

neuropeptide Y receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; NPY is a 36-amino acid peptide neurotransmitter with a C-terminal tyrosine amide residue that is widely distributed in the brain and the autonomic nervous system of many mammalian species. NPY exerts its functions through five, G-protein coupled receptor subtypes including NPY1R, NPY2R, NPY4R, NPY5R, and NPY6R; however, NPY6R is not functional in humans. NYP receptors are also activated by its two other family members, peptide YY (PYY) and pancreatic polypeptide (PP). They typically couple to Gi or Go proteins, which leads to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels, and are involved in diverse physiological roles including appetite regulation, circadian rhythm, and anxiety. Also included in this subgroup is prolactin-releasing peptide (PrRP) receptor (previously known as GPR10), which is activated by its endogenous ligand PrRP, a neuropeptide possessing C-terminal Arg-Phe-amide motif. There are two active isoforms of PrRP in mammals: one consists of 20 amino acid residues (PrRP-20) and the other consists of 31 amino acid residues (PrRP-31). PrRP receptor shows significant sequence homology to the NPY receptors, and a micromolar level of NPY can bind and completely inhibit the PrRP-evoked intracellular calcium response in PrRP receptor-expressing cells, suggesting that the PrRP receptor shares a common ancestor with the NPY receptors.


Pssm-ID: 320331 [Multi-domain]  Cd Length: 293  Bit Score: 73.02  E-value: 1.11e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  18 VVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNAMLS 97
Cdd:cd15203  12 VLGVVGNLLVIYVVLRNKSMQT-VTNIFILNLAVSDLLLCLVSLPFTLIYTLTKNWPFGSILCKLVPSLQGVSIFVSTLT 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  98 MAALSVDRWIAVVFPLsySSKMRYRDALLMVAYSWLQSLGFSL--------TQLLMNWGGYSHTYasCTVH-LEDGSRLA 168
Cdd:cd15203  91 LTAIAIDRYQLIVYPT--RPRMSKRHALLIIALIWILSLLLSLplaifqelSDVPIEILPYCGYF--CTESwPSSSSRLI 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 169 pYAAFTALFHsssFLLCLLVLCFAYLKVLRVARSHCKRIDVITVQTllllvdihpSVKERclaQQKKRRQRATK-KICIf 247
Cdd:cd15203 167 -YTISVLVLQ---FVIPLLIISFCYFRISLKLRKRVKKKRGKRTLS---------SRRRR---SELRRKRRTNRlLIAM- 229
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47220248 248 IGSFVLCFSPYVVTRQLVELIPSVHIP----RYWGVTTKCLTYAKTSTDAFVYCLLRQQYRKVL 307
Cdd:cd15203 230 VVVFAVCWLPLNLFNLLRDFEPLPQIDgrhfYLIFLICHLIAMSSACVNPLLYGWLNDNFRKEF 293
7tmA_Histamine_H2R cd15051
histamine subtype H2 receptor, member of the class A family of seven-transmembrane G ...
11-260 5.34e-14

histamine subtype H2 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes histamine receptor subtype H2R, a member of histamine receptor family, which belongs to the class A of GPCRs. Histamine plays a key role as chemical mediator and neurotransmitter in various physiological and pathophysiological processes in the central and peripheral nervous system. Histamine exerts its functions by binding to four different G protein-coupled receptors (H1-H4). The H2R subtype selectively interacts with the G(s)-type G protein that activates adenylate cyclase, leading to increased cAMP production and activation of Protein Kinase A. H2R is found in various tissues such as the brain, stomach, and heart. Its most prominent role is in histamine-induced gastric acid secretion. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320179 [Multi-domain]  Cd Length: 287  Bit Score: 70.82  E-value: 5.34e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  11 VCVLVTAVVSLLT---NLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAE 87
Cdd:cd15051   2 VLGVVLAVIILLTvigNVLVCLAVAVNRRLRN-LTNYFIVSLAVTDLLLGLLVLPFSAIYELRGEWPLGPVFCNIYISLD 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWG-------GYSHTyASCTVH 160
Cdd:cd15051  81 VMLCTASILNLFAISLDRYLAITAPLRYPSRVTPRRVAIALAAIWVVSLAVSFLPIHLGWNtpdgrvqNGDTP-NQCRFE 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 161 LEdgsrlAPYAAFTALfhsSSFLLCLLVLCFAYLKVLRVARSHCKRIDVITVQtllllvdihpSVKERCLAQQKKRRQRA 240
Cdd:cd15051 160 LN-----PPYVLLVAI---GTFYLPLLIMCGVYLRIFRIAREQAKRINALTPA----------STANSSKSAATAREHKA 221
                       250       260
                ....*....|....*....|
gi 47220248 241 TKKICIFIGSFVLCFSPYVV 260
Cdd:cd15051 222 TVTLAAVLGAFIICWFPYFT 241
7tmA_D1B_dopamine_R cd15319
D1B (or D5) subtype dopamine receptor, member of the class A family of seven-transmembrane G ...
20-265 2.08e-13

D1B (or D5) subtype dopamine receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320442 [Multi-domain]  Cd Length: 317  Bit Score: 69.60  E-value: 2.08e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  20 SLLTNLSVLLCYCQSSELRSHVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGdPFCQAASFAETFLTTNAMLSMA 99
Cdd:cd15319  14 TLLGNILVCAAVVRFRHLRSKVTNIFIVSLAVSDLFVALLVMPWKAVAEVAGYWPFG-AFCDVWVAFDIMCSTASILNLC 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 100 ALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNW---------GGYSHTYASCTVHLEDGSRLAPY 170
Cdd:cd15319  93 VISVDRYWAISSPFRYERKMTQRVALVMISVAWTLSVLISFIPVQLNWhkdsgddwvGLHNSSISRQVEENCDSSLNRTY 172
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 171 AAFTALFhssSFLLCLLVLCFAYLKVLRVARSHCKRIDVIT-----VQTLLL-LVDIHPsvkERCLAQQKKRRQRATKKI 244
Cdd:cd15319 173 AISSSLI---SFYIPVAIMIVTYTRIYRIAQIQIRRISSLEraaehAQSCRSnRIDCHH---HTSLRTSIKKETKVLKTL 246
                       250       260
                ....*....|....*....|.
gi 47220248 245 CIFIGSFVLCFSPYVVTRQLV 265
Cdd:cd15319 247 SVIMGVFVCCWLPFFILNCMV 267
7tmA_D1-like_dopamine_R cd15057
D1-like family of dopamine receptors, member of the class A family of seven-transmembrane G ...
12-260 2.60e-13

D1-like family of dopamine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. In contrast, activation of D2-like family receptors is linked to G proteins of the G(i) family, which inhibit adenylate cyclase. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320185 [Multi-domain]  Cd Length: 299  Bit Score: 69.00  E-value: 2.60e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  12 CVLVTAVVS-LLTNLSVLLCYCQSSELRSHVPGIFILNLSFSNILLAAINMPttFLGVAENGK--PFGDpFCQAASFAET 88
Cdd:cd15057   5 CILYLLVLLtLLGNALVIAAVLRFRHLRSKVTNYFIVSLAVSDLLVAILVMP--WAAVNEVAGywPFGS-FCDVWVSFDI 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  89 FLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNW---------GGYSHTYASCTV 159
Cdd:cd15057  82 MCSTASILNLCVISVDRYWAISSPFRYERRMTRRRAFIMIAVAWTLSALISFIPVQLGWhraddtseaLALYADPCQCDS 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 160 HLedgSRLapYAAFTALFhssSFLLCLLVLCFAYLKVLRVARSHCKRIDVitvqtllllvdIHPSVKERCLAQQK----- 234
Cdd:cd15057 162 SL---NRT--YAISSSLI---SFYIPVAIMIVTYTRIYRIARRQIRRIAA-----------LERAAQESTNPDSSlrssl 222
                       250       260
                ....*....|....*....|....*.
gi 47220248 235 KRRQRATKKICIFIGSFVLCFSPYVV 260
Cdd:cd15057 223 RRETKALKTLSIIMGVFVCCWLPFFI 248
7tmA_TAAR1 cd15314
trace amine-associated receptor 1 and similar receptors, member of the class A family of ...
14-258 3.39e-13

trace amine-associated receptor 1 and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptor 1 (TAAR1) is one of the 15 identified trace amine-associated receptor subtypes, which form a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. TAAR1 is coupled to the Gs protein, which leads to activation of adenylate cyclase, and is thought to play functional role in the regulation of brain monoamines. TAAR1 is also shown to be activated by psychoactive compounds such as Ecstasy (MDMA), amphetamine and LSD. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320438 [Multi-domain]  Cd Length: 282  Bit Score: 68.42  E-value: 3.39e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  14 LVTAVVSLLT---NLSVLLCYCQSSELrsHVPGIF-ILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETF 89
Cdd:cd15314   5 IFLGLISLVTvcgNLLVIISIAHFKQL--HTPTNYlILSLAVADLLVGGLVMPPSMVRSVETCWYFGDLFCKIHSSFDIT 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  90 LTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQS--LGFSLTQLLMN-WGGYSHTYASCTVHLEDGSR 166
Cdd:cd15314  83 LCTASILNLCFISIDRYYAVCQPLLYRSKITVRVVLVMILISWSVSalVGFGIIFLELNiKGIYYNHVACEGGCLVFFSK 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 167 LAPYAAFTALFHSSSFLLCLLvlcfaYLKVLRVARSHCKRIDvitvqtllllvdihpSVKERCLAQQKKRRQRATKKICI 246
Cdd:cd15314 163 VSSVVGSVFSFYIPAVIMLCI-----YLKIFLVAQRQARSIQ---------------SARTKSGASSSKMERKATKTLAI 222
                       250
                ....*....|..
gi 47220248 247 FIGSFVLCFSPY 258
Cdd:cd15314 223 VMGVFLLCWTPF 234
7tmA_Ap5-HTB1-like cd15065
serotonin receptor subtypes B1 and B2 from Aplysia californica and similar proteins; member of ...
18-258 4.62e-13

serotonin receptor subtypes B1 and B2 from Aplysia californica and similar proteins; member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes Aplysia californica serotonin receptors Ap5-HTB1 and Ap5-HTB2, and similar proteins from bilateria including insects, mollusks, annelids, and worms. Ap5-HTB1 is one of the several different receptors for 5-hydroxytryptamine (5HT, serotonin). In Aplysia, serotonin plays important roles in a variety of behavioral and physiological processes mediated by the central nervous system. These include circadian clock, feeding, locomotor movement, cognition and memory, synaptic growth and synaptic plasticity. Both Ap5-HTB1 and Ap5-HTB2 receptors are coupled to G-proteins that stimulate phospholipase C, leading to the activation of phosphoinositide metabolism. Ap5-HTB1 is expressed in the reproductive system, whereas Ap5-HTB2 is expressed in the central nervous system.


Pssm-ID: 320193 [Multi-domain]  Cd Length: 300  Bit Score: 68.53  E-value: 4.62e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  18 VVSLLTNLSVLLCYCQSSELRsHVPGIFILNLSFSNILLAAINMptTFLGVAE-NGK-PFGDPFCQAASFAETFLTTNAM 95
Cdd:cd15065  11 VLAIFGNVLVCLAIFTDRRLR-KKSNLFIVSLAVADLLVALLVM--TFAVVNDlLGYwLFGETFCNIWISFDVMCSTASI 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  96 LSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGYSHTYASCTVHLEDGSRL------AP 169
Cdd:cd15065  88 LNLCAISLDRYIHIKKPLKYERWMTTRRALVVIASVWILSALISFLPIHLGWHRLSQDEIKGLNHASNPKPScaldlnPT 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 170 YAAFTALFhssSFLLCLLVLCFAYLKVLRVARSHCKRIDVITVQTLLLLVDIHPSVKERClAQQKKRRQRATKKICIFIG 249
Cdd:cd15065 168 YAVVSSLI---SFYIPCLVMLLIYSRLYLYARKHVVNIKSQKLPSESGSKFQVPSLSSKH-NNQGVSDHKAAVTLGIIMG 243

                ....*....
gi 47220248 250 SFVLCFSPY 258
Cdd:cd15065 244 VFLICWLPF 252
7tmA_5-HT1_5_7 cd15064
serotonin receptor subtypes 1, 5 and 7, member of the class A family of seven-transmembrane G ...
19-305 6.29e-13

serotonin receptor subtypes 1, 5 and 7, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes serotonin receptor subtypes 1, 5, and 7 that are activated by the neurotransmitter serotonin. The 5-HT1 and 5-HT5 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family. The 5-HT1 receptor subfamily includes 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as 5-HT2C receptor. The 5-HT5A and 5-HT5B receptors have been cloned from rat and mouse, but only the 5-HT5A isoform has been identified in human because of the presence of premature stop codons in the human 5-HT5B gene, which prevents a functional receptor from being expressed. The 5-HT7 receptor is coupled to Gs, which positively stimulates adenylate cyclase activity, leading to increased intracellular cAMP formation and calcium influx. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320192 [Multi-domain]  Cd Length: 258  Bit Score: 67.35  E-value: 6.29e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  19 VSLLTNLSVLLCYCQSSELRsHVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNAMLSM 98
Cdd:cd15064  13 ATILGNALVIAAILLTRKLH-TPANYLIASLAVADLLVAVLVMPLSAVYELTGRWILGQVLCDIWISLDVTCCTASILHL 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  99 AALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGYSHTYASCTVHLEDGSRLapYAAFTALFh 178
Cdd:cd15064  92 CVIALDRYWAITDAVEYAHKRTPKRAAVMIALVWTLSICISLPPLFGWRTPDSEDPSECLISQDIGYTI--FSTFGAFY- 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 179 sssflLCLLVLCFAYLKVLRVArshckridvitvqtllllvdihpsvkerclaqqkKRRQRATKKICIFIGSFVLCFSPY 258
Cdd:cd15064 169 -----IPLLLMLILYWKIYRAA----------------------------------ARERKAAKTLGIILGAFIVCWLPF 209
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 47220248 259 VVTRQLVELIPSVHIPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRK 305
Cdd:cd15064 210 FLVALIVPLCSHCWIPLALKSFFLWLGYFNSLINPLIYTFFNKDFRK 256
7tmA_TACR_family cd14992
tachykinin receptor and closely related proteins, member of the class A family of ...
8-144 1.17e-12

tachykinin receptor and closely related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes G-protein coupled receptors for a variety of neuropeptides of the tachykinin (TK) family as well as closely related receptors. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320123 [Multi-domain]  Cd Length: 291  Bit Score: 67.07  E-value: 1.17e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAE 87
Cdd:cd14992   2 ILGVALVVIILVSVVGNFIVIAALARHKNLRG-ATNYFIASLAISDLLMALFCTPFNFTYVVSLSWEYGHFLCKIVNYLR 80
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLL 144
Cdd:cd14992  81 TVSVYASSLTLTAIAFDRYFAIIHPLKPRHRQSYTTTVIIIITIWVVSLLLAIPQLY 137
7tmA_Galanin_R-like cd14971
galanin receptor and related proteins, member of the class A family of seven-transmembrane G ...
18-305 1.19e-12

galanin receptor and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes G-protein coupled galanin receptors, kisspeptin receptor and allatostatin-A receptor (AstA-R) in insects. These receptors, which are members of the class A of seven transmembrane GPCRs, share a high degree of sequence homology among themselves. The galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, eating disorders, and epilepsy, among many others. KiSS1-derived peptide receptor (also known as GPR54 or kisspeptin receptor) binds the peptide hormone kisspeptin (metastin), which encoded by the metastasis suppressor gene (KISS1) expressed in various endocrine and reproductive tissues. AstA-R is a G-protein coupled receptor that binds allatostatin A. Three distinct types of allatostatin have been identified in the insects and crustaceans: AstA, AstB, and AstC. They both inhibit the biosynthesis of juvenile hormone and exert an inhibitory influence on food intake. Therefore, allatostatins are considered as potential targets for insect control.


Pssm-ID: 320102 [Multi-domain]  Cd Length: 281  Bit Score: 67.11  E-value: 1.19e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  18 VVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNAMLS 97
Cdd:cd14971  12 LLGLVGNSLVILVVARNKPMRS-TTNLFILNLAVADLTFLLFCVPFTATIYPLPGWVFGDFMCKFVHYFQQVSMHASIFT 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  98 MAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLtQLLMNWGGYSHTYASCTVHLEDGSRLAPYAAFTALF 177
Cdd:cd14971  91 LVAMSLDRFLAVVYPLRSLHIRTPRNALAASGCIWVVSLAVAA-PVLALHRLRNYTPGNRTVCSEAWPSRAHRRAFALCT 169
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 178 HSSSFLLCLLVLCFAYLKVLRvarsHCKRIdvitvqtllllvdihpSVKERCLAQQKKRRQRATKKICIFIGSFVLCFSP 257
Cdd:cd14971 170 FLFGYLLPLLLICVCYAAMLR----HLWRV----------------AVRPVLSEGSRRAKRKVTRLVLVVVVLFAACWGP 229
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|...
gi 47220248 258 YVVTRQLVELIPSvhiPR-YWGVTTK----CLTYAKTSTDAFVYCLLRQQYRK 305
Cdd:cd14971 230 IHAILLLVALGPF---PLtYATYALRiwahCLAYSNSAVNPVLYAFLSEHFRK 279
7tmA_D1A_dopamine_R cd15320
D1A (or D1) subtype dopamine receptor, member of the class A family of seven-transmembrane G ...
8-260 1.54e-12

D1A (or D1) subtype dopamine receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320443 [Multi-domain]  Cd Length: 319  Bit Score: 66.95  E-value: 1.54e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVS-LLTNLSVLLCYCQSSELRSHVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDpFCQAASFA 86
Cdd:cd15320   2 VLTGCFLSVLILStLLGNTLVCAAVIRFRHLRSKVTNFFVISLAVSDLLVAVLVMPWKAVAEIAGFWPFGS-FCNIWVAF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  87 ETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNW-----GGYSHTYASC---T 158
Cdd:cd15320  81 DIMCSTASILNLCVISVDRYWAISSPFRYERKMTPKVAFIMISVAWTLSVLISFIPVQLNWhkakpTSFLDLNASLrdlT 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 159 VHLEDGSRLAPYAAFTALFhssSFLLCLLVLCFAYLKVLRVARSHCKRIDVIT---------VQTLLLLVDIHPSVKERC 229
Cdd:cd15320 161 MDNCDSSLNRTYAISSSLI---SFYIPVAIMIVTYTRIYRIAQKQIRRISALEraavhakncQNSTGNRGSGDCQQPESS 237
                       250       260       270
                ....*....|....*....|....*....|.
gi 47220248 230 LAQQKKRRQRATKKICIFIGSFVLCFSPYVV 260
Cdd:cd15320 238 FKMSFKRETKVLKTLSVIMGVFVCCWLPFFI 268
7tmA_photoreceptors_insect cd15079
insect photoreceptors R1-R6 and similar proteins, member of the class A family of ...
7-150 2.05e-12

insect photoreceptors R1-R6 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the insect photoreceptors and their closely related proteins. The Drosophila eye is composed of about 800 unit eyes called ommatidia, each of which contains eight photoreceptor cells (R1-R8). The six outer photoreceptors (R1-R6) function like the vertebrate rods and are responsible for motion detection in dim light and image formation. The R1-R6 photoreceptors express a blue-absorbing pigment, Rhodopsin 1(Rh1). The inner photoreceptors (R7 and R8) are considered the equivalent of the color-sensitive vertebrate cone cells, which express a range of different pigments. The R7 photoreceptors express one of two different UV absorbing pigments, either Rh3 or Rh4. Likewise, the R8 photoreceptors express either the blue absorbing pigment Rh5 or green absorbing pigment Rh6. These photoreceptors belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320207 [Multi-domain]  Cd Length: 292  Bit Score: 66.45  E-value: 2.05e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   7 FLLEVCVLVTAVVSLLTNLSVLLCYCQSSELRShvPG-IFILNLSFSNILLAaINMPTTFLGVAENGKPFGDPFCQAASF 85
Cdd:cd15079   1 YLLGFIYIFLGIVSLLGNGLVIYIFSTTKSLRT--PSnMLVVNLAISDFLMM-IKMPIFIYNSFYEGWALGPLGCQIYAF 77
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 47220248  86 AETFLTTNAMLSMAALSVDRWIAVVFPLSySSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGY 150
Cdd:cd15079  78 LGSLSGIGSIWTNAAIAYDRYNVIVKPLN-GNPLTRGKALLLILFIWLYALPWALLPLLFGWGRY 141
7tmA_CCKR-like cd14993
cholecystokinin receptors and related proteins, member of the class A family of ...
18-146 2.29e-12

cholecystokinin receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents four G-protein coupled receptors that are members of the RFamide receptor family, including cholecystokinin receptors (CCK-AR and CCK-BR), orexin receptors (OXR), neuropeptide FF receptors (NPFFR), and pyroglutamylated RFamide peptide receptor (QRFPR). These RFamide receptors are activated by their endogenous peptide ligands that share a common C-terminal arginine (R) and an amidated phenylanine (F) motif. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors. Orexins (OXs; also referred to as hypocretins) are neuropeptide hormones that regulate the sleep-wake cycle and potently influence homeostatic systems regulating appetite and feeding behavior or modulating emotional responses such as anxiety or panic. OXs are synthesized as prepro-orexin (PPO) in the hypothalamus and then proteolytically cleaved into two forms of isoforms: orexin-A (OX-A) and orexin-B (OX-B). OXA is a 33 amino-acid peptide with N-terminal pyroglutamyl residue and two intramolecular disulfide bonds, whereas OXB is a 28 amino-acid linear peptide with no disulfide bonds. OX-A binds orexin receptor 1 (OX1R) with high-affinity, but also binds with somewhat low-affinity to OX2R, and signals primarily to Gq coupling, whereas OX-B shows a strong preference for the orexin receptor 2 (OX2R) and signals through Gq or Gi/o coupling. The 26RFa, also known as QRFP (Pyroglutamylated RFamide peptide), is a 26-amino acid residue peptide that exerts similar orexigenic activity including the regulation of feeding behavior in mammals. It is the ligand for G-protein coupled receptor 103 (GPR103), which is predominantly expressed in paraventricular (PVN) and ventromedial (VMH) nuclei of the hypothalamus. GPR103 shares significant protein sequence homology with orexin receptors (OX1R and OX2R), which have recently shown to produce a neuroprotective effect in Alzheimer's disease by forming a functional heterodimer with GPR103. Neuropeptide FF (NPFF) is a mammalian octapeptide that has been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of NPFF are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R.


Pssm-ID: 320124 [Multi-domain]  Cd Length: 296  Bit Score: 66.47  E-value: 2.29e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  18 VVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNAMLS 97
Cdd:cd14993  12 LLALVGNSLVIAVVLRNKHMRT-VTNYFLVNLAVADLLVSLFCMPLTLLENVYRPWVFGEVLCKAVPYLQGVSVSASVLT 90
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 47220248  98 MAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMN 146
Cdd:cd14993  91 LVAISIDRYLAICYPLKARRVSTKRRARIIIVAIWVIAIIIMLPLLVVY 139
7tmA_Opsin5_neuropsin cd15074
neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled ...
11-307 3.96e-12

neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropsin, also known as Opsin-5, is a photoreceptor protein expressed in the retina, brain, testes, and spinal cord. Neuropsin belongs to the type 2 opsin family of the class A G-protein coupled receptors. Mammalian neuropsin activates Gi protein-mediated photo-transduction pathway in a UV-dependent manner, whereas, in non-mammalian vertebrates, neuropsin is involved in regulating the photoperiodic control of seasonal reproduction in birds such as quail. As with other opsins, it may also act as a retinal photoisomerase.


Pssm-ID: 320202 [Multi-domain]  Cd Length: 284  Bit Score: 65.37  E-value: 3.96e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  11 VCVLVTAVVSLLTNLSVLLCYC-QSSELRShvPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETF 89
Cdd:cd15074   5 IYLTVIGILSTLGNGTVLFVLYrRRSKLKP--AELLTVNLAVSDLGISVFGYPLAIISAFAHRWLFGDIGCVFYGFCGFL 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  90 LTTNAMLSMAALSVDRWIAVVFPlSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLmNWGGYS----HTyaSCTVHLEDGS 165
Cdd:cd15074  83 FGCCSINTLTAISIYRYLKICHP-PYGPKLSRRHVCIVIVAIWLYALFWAVAPLV-GWGSYGpepfGT--SCSIDWTGAS 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 166 RLAPYAAFTALFHSSSFLLCLLVLCFAYLKVLRVARSHCKRIDVITVQTllllvdihpsvkerclAQQKKRRQRATKKIC 245
Cdd:cd15074 159 ASVGGMSYIISIFIFCYLLPVLIIVFSYVKIIRKVKSSRKRVAGFDSRS----------------KRQHKIERKVTKVAV 222
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47220248 246 IFIGSFVLCFSPYVVTRQLVELIPSVHIPRYWGVTTkCLtYAKTST--DAFVYCLLRQQYRKVL 307
Cdd:cd15074 223 LICAGFLIAWTPYAVVSMWSAFGSPDSVPILASILP-AL-FAKSSCmyNPIIYLLFSSKFRQDL 284
7tmA_TACR cd15390
neurokinin receptors (or tachykinin receptors), member of the class A family of ...
14-155 9.09e-12

neurokinin receptors (or tachykinin receptors), member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents G-protein coupled receptors for a variety of neuropeptides of the tachykinin (TK) family. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320512 [Multi-domain]  Cd Length: 289  Bit Score: 64.62  E-value: 9.09e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  14 LVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTN 93
Cdd:cd15390   8 VVMVLVAIGGNLIVIWIVLAHKRMRT-VTNYFLVNLAVADLLISAFNTVFNFTYLLYNDWPFGLFYCKFSNFVAITTVAA 86
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47220248  94 AMLSMAALSVDRWIAVVFPLsySSKMRYRDALLMVAYSWLQSLGFSLTQLLmnwggYSHTYA 155
Cdd:cd15390  87 SVFTLMAISIDRYIAIVHPL--RPRLSRRTTKIAIAVIWLASFLLALPQLL-----YSTTET 141
7tmA_tyramine_R-like cd15061
tyramine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
8-305 1.61e-11

tyramine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes tyramine-specific receptors and similar proteins found in insects and other invertebrates. These tyramine receptors form a distinct receptor family that is phylogenetically different from the other tyramine/octopamine receptors which also found in invertebrates. Both octopamine and tyramine mediate their actions via G protein-coupled receptors (GPCRs) and are the invertebrate equivalent of vertebrate adrenergic neurotransmitters. In Drosophila, octopamine is involved in ovulation by mediating an egg release from the ovary, while a physiological role for tyramine in this process is not fully understood. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320189 [Multi-domain]  Cd Length: 256  Bit Score: 63.53  E-value: 1.61e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAE 87
Cdd:cd15061   1 ILISFLILAIIFTIFGNLLVILAVATTRRLRT-ITNCYIVSLATADLLVGVLVLPLAIIRQLLGYWPLGSHLCDFWISLD 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLL-MNWGGYShTYASCTVHLEDGSR 166
Cdd:cd15061  80 VLLCTASILNLCCISLDRYFAITYPLKYRTKRSRRLAITMILAVWVISLLITSPPLVgPSWHGRR-GLGSCYYTYDKGYR 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 167 LapYAAFTALFhsssflLCLLVLCFAYLKVLRVArshckridvitvqtllllvdihpsvkerclaqqkKRRQRATKKICI 246
Cdd:cd15061 159 I--YSSMGSFF------LPLLLMLFVYLRIFRVI----------------------------------AKERKTAKTLAI 196
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47220248 247 FIGSFVLCFSPYVVTrQLVELIPSVHIPRywgVTTKCLT---YAKTSTDAFVYCLLRQQYRK 305
Cdd:cd15061 197 VVGCFIVCWLPFFIM-YLIEPFCDCQFSE---ALSTAFTwlgYFNSVINPFIYAFYNKDFRR 254
7tmA_purinoceptor-like cd14982
purinoceptor and its related proteins, member of the class A family of seven-transmembrane G ...
18-305 2.30e-11

purinoceptor and its related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this subfamily include lysophosphatidic acid receptor, P2 purinoceptor, protease-activated receptor, platelet-activating factor receptor, Epstein-Barr virus induced gene 2, proton-sensing G protein-coupled receptors, GPR35, and GPR55, among others. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341318 [Multi-domain]  Cd Length: 283  Bit Score: 63.05  E-value: 2.30e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  18 VVSLLTNLSVLLCYCQSSELRSHVpGIFILNLSFSNILLAaINMPT-TFLGVAENGKPFGDPFCQAASFAETFLTTNAML 96
Cdd:cd14982  12 ILGLLGNILALWVFLRKMKKRSPT-TIYMINLALADLLFV-LTLPFrIYYYLNGGWWPFGDFLCRLTGLLFYINMYGSIL 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  97 SMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLM---NWGGYSHTyaSCTVHLEDGSRLAPYAAF 173
Cdd:cd14982  90 FLTCISVDRYLAVVHPLKSRRLRRKRYAVGVCAGVWILVLVASVPLLLLrstIAKENNST--TCFEFLSEWLASAAPIVL 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 174 TALFhsSSFLLCLLVLCFAYLKVLRVARshckridvitvqtllllvdihpsvKERCLAQQKKRRQRATKKICIFIGSFVL 253
Cdd:cd14982 168 IALV--VGFLIPLLIILVCYSLIIRALR------------------------RRSKQSQKSVRKRKALRMILIVLAVFLV 221
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 254 CFSPYVVTR--------QLVELIPSVHIPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRK 305
Cdd:cd14982 222 CFLPYHVTRilyllvrlSFIADCSARNSLYKAYRITLCLASLNSCLDPLIYYFLSKTFRK 281
7tmA_Opsin_Gq_invertebrates cd15337
invertebrate Gq opsins, member of the class A family of seven-transmembrane G protein-coupled ...
7-307 2.54e-11

invertebrate Gq opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; The invertebrate Gq-coupled opsin subfamily includes the arthropod and mollusc visual opsins. Like the vertebrate visual opsins, arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. The invertebrate Gq opsins are closely related to the vertebrate melanopsins, the primary photoreceptor molecules for non-visual responses to light, and the R1-R6 photoreceptors, which are the fly equivalent to the vertebrate rods. The Gq opsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320459 [Multi-domain]  Cd Length: 292  Bit Score: 63.11  E-value: 2.54e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   7 FLLEVCVLVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGK-PFGDPFCQAASF 85
Cdd:cd15337   1 YLIGIYIAIVGILGVIGNLLVIYLFSKTKSLRT-PSNMFIINLAISDFGFSAVNGFPLKTISSFNKKwIWGKVACELYGF 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  86 AETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQlLMNWGGYS----HTyaSCTvhL 161
Cdd:cd15337  80 AGGIFGFMSITTLAAISIDRYLVIAKPLEAMKKMTFKRAFIMIIIIWLWSLLWSIPP-FFGWGRYVpegfQT--SCT--F 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 162 EDGSRLAPYAAFTALFHSSSFLLCLLVLCFAYLKVLRVARSHCKRIdVITVQTLLllvdihpsVKERCLAQQKKRRQ-RA 240
Cdd:cd15337 155 DYLSRDLNNRLFILGLFIFGFLCPLLIIIFCYVNIIRAVRNHEKEM-TQTAKSGM--------GKDTEKNDARKKAEiRI 225
                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47220248 241 TKKICIFIGSFVLCFSPYVVtrqlVELIpSVHIPRYWGVTTKC---LTYAKTST--DAFVYCLLRQQYRKVL 307
Cdd:cd15337 226 AKVAIILISLFLLSWTPYAV----VALL-GQFGPAYWITPYVSelpVMFAKASAiyNPIIYALSHPKFRAAL 292
7tmA_Histamine_H3R_H4R cd15048
histamine receptor subtypes H3R and H4R, member of the class A family of seven-transmembrane G ...
11-305 3.97e-11

histamine receptor subtypes H3R and H4R, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes histamine subtypes H3R and H4R, members of the histamine receptor family, which belong to the class A of GPCRs. Histamine plays a key role as chemical mediator and neurotransmitter in various physiological and pathophysiological processes in the central and peripheral nervous system. Histamine exerts its functions by binding to four different G protein-coupled receptors (H1-H4). The H3 and H4 receptors couple to the G(i)-proteins, which leading to the inhibition of cAMP formation. The H3R receptor functions as a presynaptic autoreceptors controlling histamine release and synthesis. The H4R plays an important role in histamine-mediated chemotaxis in mast cells and eosinophils. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320176 [Multi-domain]  Cd Length: 296  Bit Score: 62.71  E-value: 3.97e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  11 VCVLVTAVVSLLT---NLSVLLCYCQSSELRsHVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAE 87
Cdd:cd15048   2 VLAVLISVLILVTvigNLLVILAFIKDKKLR-TVSNFFLLNLAVADFLVGLVSMPFYIPYTLTGKWPFGKVFCKAWLVVD 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQS--------LGFSLtqllmnWGGYSHTYA-SCT 158
Cdd:cd15048  81 YTLCTASALTIVLISLDRYLSVTKAVKYRAKQTKRRTVLLMALVWILAfllygpaiIGWDL------WTGYSIVPTgDCE 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 159 VHLEDgsrlapYAAFTALFHSSSFLLCLLVLCFAYLKVLRVARSHCKRIDVITVQTLlllvdIHPSVKERCLAQ--QKKR 236
Cdd:cd15048 155 VEFFD------HFYFTFITSVLEFFIPFISVSFFNLLIYLNIRKRSRRRPLRSVPIL-----PASQNPSRARSQreQVKL 223
                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47220248 237 RQ--RATKKICIFIGSFVLCFSPYVVTrQLVELIPSVH-IPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRK 305
Cdd:cd15048 224 RRdrKAAKSLAILVLVFLICWAPYTIL-TIIRSFCSGScVDSYLYEFTFWLLWTNSAINPFLYAACHPRFRK 294
7tmA_Beta_AR cd15058
beta adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane ...
7-297 7.66e-11

beta adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; The beta adrenergic receptor (beta adrenoceptor), also known as beta AR, is activated by hormone adrenaline (epinephrine) and plays important roles in regulating cardiac function and heart rate, as well as pulmonary physiology. The human heart contains three subtypes of the beta AR: beta-1 AR, beta-2 AR, and beta-3 AR. Beta-1 AR and beta-2 AR, which expressed at about a ratio of 70:30, are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway. In contrast, beta-3 AR produces negative inotropic effects by activating inhibitory G(i) proteins. The aberrant expression of beta-ARs can lead to cardiac dysfunction such as arrhythmias or heart failure. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320186 [Multi-domain]  Cd Length: 305  Bit Score: 62.08  E-value: 7.66e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   7 FLLEVCVLVTAVvsllTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFA 86
Cdd:cd15058   5 LLLALIILAIVV----GNLLVIIAIARTSRLQT-MTNIFITSLACADLVMGLLVVPLGATIVVTGKWQLGNFWCELWTSV 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  87 ETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGYSHTYASCTVHLEDGSR 166
Cdd:cd15058  80 DVLCVTASIETLCVIAVDRYIAITRPLRYQVLLTKRRARVIVCVVWIVSALVSFVPIMNQWWRANDPEANDCYQDPTCCD 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 167 LAPYAAFTALFHSSSFLLCLLVLCFAYLKVLRVARSHCKRID----VITVQTLLLLVDIHPSVKERCLAQQKK---RRQR 239
Cdd:cd15058 160 FRTNMAYAIASSVVSFYIPLLIMIFVYARVFLIATRQLQLIDkrrlRFQSECPAPQTTSPEGKRSSGRRPSRLtvvKEHK 239
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 47220248 240 ATKKICIFIGSFVLCFSPYVVTRQLVELIPSVhIPRYWGVTTKCLTYAKTSTDAFVYC 297
Cdd:cd15058 240 ALKTLGIIMGTFTLCWLPFFIANIINVFNRNL-PPGEVFLLLNWLGYINSGLNPIIYC 296
7tmA_PSP24-like cd15213
G protein-coupled receptor PSP24 and similar proteins, member of the class A family of ...
8-151 7.83e-11

G protein-coupled receptor PSP24 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes two human orphan receptors, GPR45 and GPR65, and their closely related proteins found in vertebrates and invertebrates. GPR45 and GPR 65 are also called PSP24-alpha (or PSP24-1) and PSP24-beta (or PSP24-2) in other vertebrates, respectively. These receptors exhibit the highest sequence homology to each other. PSP24 was originally identified as a novel, high-affinity lysophosphatidic acid (LPA) receptor in Xenopus laevis oocytes; however, PSP24 receptors (GPR45 and GPR63) have not been shown to be activated by LPA. Instead, sphingosine 1-phosphate and dioleoylphosphatidic acid have been shown to act as low affinity agonists for GPR63. PSP24 receptors are highly expressed in neuronal cells of cerebellum and their expression level remains constant from the early embryonic stages to adulthood, suggesting the important role of PSP24s in brain neuronal functions. Members of this subgroup contain the highly conserved Asp-Arg-Tyr/Phe (DRY/F) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors which is important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320341 [Multi-domain]  Cd Length: 262  Bit Score: 61.61  E-value: 7.83e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRSHVpGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAE 87
Cdd:cd15213   2 TLAILMILMIFVGFLGNSIVCLIVYQKPAMRSAI-NLLLANLAFSDIMLSLVCMPFAAVTIITGRWIFGDIFCRISAMLY 80
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVfplSYSSKMRYRDALLMVAYSWLQSLGFSLTqLLMNWGGYS 151
Cdd:cd15213  81 WFFVLEGVAILLIISVDRYLIIV---QRQDKLNPHRAKILIAVSWVLSFCVSFP-PLVGWGKYE 140
7tmA_tyramine_octopamine_R-like cd15060
tyramine/octopamine receptor-like, member of the class A family of seven-transmembrane G ...
7-305 9.93e-11

tyramine/octopamine receptor-like, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes tyramine/octopamine receptors and similar proteins found in insects and other invertebrates. Both octopamine and tyramine mediate their actions via G protein-coupled receptors (GPCRs) and are the invertebrate equivalent of vertebrate adrenergic neurotransmitters. In Drosophila, octopamine is involved in ovulation by mediating an egg release from the ovary, while a physiological role for tyramine in this process is not fully understood. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320188 [Multi-domain]  Cd Length: 260  Bit Score: 61.29  E-value: 9.93e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   7 FLLEVCVLVTAVVSLLTNLSVLLcycqSSELRShVPGIFILNLSFSNILLAAINMPttfLGVAEN--GK-PFGDPFCQAA 83
Cdd:cd15060   5 ILLSVIIAFTIVGNILVILSVFT----YRPLRI-VQNFFIVSLAVADLAVAIFVLP---LNVAYFllGKwLFGIHLCQMW 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  84 SFAETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLL--MNWGGYSHTYASCTVHL 161
Cdd:cd15060  77 LTCDILCCTASILNLCAIALDRYWAIHDPINYAQKRTLKRVLLMIVVVWALSALISVPPLIgwNDWPENFTETTPCTLTE 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 162 EDGSRLapYAAFTALFhsssflLCLLVLCFAYLKVLRVARshckridvitvqtllllvdihpsvKERclaqqkkrrqRAT 241
Cdd:cd15060 157 EKGYVI--YSSSGSFF------IPLLIMTIVYVKIFIATS------------------------KER----------RAA 194
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47220248 242 KKICIFIGSFVLCFSPYVVTRQLVELIPSVHIPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRK 305
Cdd:cd15060 195 RTLGIIMGVFVVCWLPFFLMYVILPFCETCSPSAKVVNFITWLGYVNSALNPVIYTIFNLDFRR 258
7tmA_alpha1A_AR cd15325
alpha-1 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G ...
8-305 1.06e-10

alpha-1 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320448 [Multi-domain]  Cd Length: 261  Bit Score: 61.06  E-value: 1.06e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAE 87
Cdd:cd15325   2 VLGVILGGFILFGVLGNILVILSVACHRHLQT-VTHYFIVNLAVADLLLTSTVLPFSAIFEILGYWAFGRVFCNIWAAVD 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGYSHTYASCTVHLEDGsrl 167
Cdd:cd15325  81 VLCCTASIMSLCIISIDRYIGVSYPLRYPSIMTERRGLLALLCVWVLSLVISIGPLFGWKEPAPEDETICQITEEPG--- 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 168 apYAAFTALfhsssfllcllvlCFAYLKVLRVARSHCkRIDVItvqtllllvdihpsvkerclAQQKKRRQRATKKICIF 247
Cdd:cd15325 158 --YALFSAL-------------GSFYLPLAIILVMYC-RVYVV--------------------ALKFSREKKAAKTLGIV 201
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 47220248 248 IGSFVLCFSPYVVTRQLVELIPSVHIPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRK 305
Cdd:cd15325 202 VGCFVLCWLPFFLVMPIGSIFPAYKPSDTVFKITFWLGYFNSCINPIIYPCSSQEFKK 259
7tmA_Vasopressin-like cd14986
vasopressin receptors and its related G protein-coupled receptors, member of the class A ...
10-260 1.80e-10

vasopressin receptors and its related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this group form a subfamily within the class A G-protein coupled receptors (GPCRs), which includes the vasopressin and oxytocin receptors, the gonadotropin-releasing hormone receptors (GnRHRs), the neuropeptide S receptor (NPSR), and orphan GPR150. These receptors share significant sequence homology with each other, suggesting that they have a common evolutionary origin. Vasopressin, also known as arginine vasopressin or anti-diuretic hormone, is a neuropeptide synthesized in the hypothalamus. The actions of vasopressin are mediated by the interaction of this hormone with three tissue-specific subtypes: V1AR, V1BR, and V2R. Although vasopressin differs from oxytocin by only two amino acids, they have divergent physiological functions. Vasopressin is involved in regulating osmotic and cardiovascular homeostasis, whereas oxytocin plays an important role in the uterus during childbirth and in lactation. GnRHR, also known as luteinizing hormone releasing hormone receptor (LHRHR), plays an central role in vertebrate reproductive function; its activation by binding to GnRH leads to the release of follicle stimulating hormone (FSH) and luteinizing hormone (LH) from the pituitary gland. Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR has also been associated with asthma and allergy. GPR150 is an orphan receptor closely related to the oxytocin and vasopressin receptors.


Pssm-ID: 320117 [Multi-domain]  Cd Length: 295  Bit Score: 60.85  E-value: 1.80e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  10 EVCVL-VTAVVSLLTNLSVLLCYCQSSELRSHVpGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAET 88
Cdd:cd14986   3 RVAVLgVLFVFTLVGNGLVILVLRRKRKKRSRV-NIFILNLAIADLVVAFFTVLTQIIWEATGEWVAGDVLCRIVKYLQV 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  89 FLTTNAMLSMAALSVDRWIAVVFPLSySSKMRYRdALLMVAYSWLQSLGFSLTQLLM-NWGGYSHTYASCTVHLEDGSRL 167
Cdd:cd14986  82 VGLFASTYILVSMSLDRYQAIVKPMS-SLKPRKR-ARLMIVVAWVLSFLFSIPQLVIfVERELGDGVHQCWSSFYTPWQR 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 168 APYAAFTALFhssSFLLCLLVLCFAYLKVLRV--ARSHCKRIDVITVQTLLLLVDIHPSVKERCLAQQKKRRQRATkkIC 245
Cdd:cd14986 160 KVYITWLATY---VFVIPLIILSYCYGRILRTiwIRSRQKTDRPIAPTAMSCRSVSCVSSRVSLISRAKIKTIKMT--LV 234
                       250
                ....*....|....*
gi 47220248 246 IFIGsFVLCFSPYVV 260
Cdd:cd14986 235 IILA-FILCWTPYFI 248
7tmA_GPR135 cd15212
G protein-coupled receptor 135, member of the class A family of seven-transmembrane G ...
13-140 1.87e-10

G protein-coupled receptor 135, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR135, also known as the somatostatin- and angiotensin-like peptide receptor (SALPR), is found in various tissues including eye, brain, cervix, stomach, and testis. Pharmacological studies have shown that relaxin-3 (R3) is a high-affinity endogenous ligand for GPR135. R3 has recently been identified as a new member of the insulin/relaxin family of peptide hormones and is exclusively expressed in the brain neurons. In addition to GPR135, R3 also acts as an agonist for GPR142, a pseudogene in the rat, and can activate LGR7 (leucine repeat-containing G-protein receptor-7), which is the main receptor for relaxin-1 (R1) and relaxin-2 (R2). While R1 and R2 are hormones primarily associated with reproduction and pregnancy, R3 is involved in neuroendocrine and sensory processing. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320340 [Multi-domain]  Cd Length: 285  Bit Score: 60.55  E-value: 1.87e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  13 VLVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLG-VAENGKPFGDPFCQAASFAETFLT 91
Cdd:cd15212   7 LLAIFLLSSLGNCAVIGVIVKHRQLRT-VTNAFILSLSLSDLLTALLCLPFAFLTlFSRPGWLFGDRLCLANGFFNACFG 85
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 47220248  92 TNAMLSMAALSVDRWIAVVFPLsySSKMRYRDALLMVAYSWLQSLGFSL 140
Cdd:cd15212  86 IVSTLTMTLISFDRYYAIVRQP--QGKIGRRRALQLLAAAWLTALGFSL 132
7tmA_alpha1D_AR cd15327
alpha-1 adrenergic receptors subtype D, member of the class A family of seven-transmembrane G ...
18-271 2.17e-10

alpha-1 adrenergic receptors subtype D, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320450 [Multi-domain]  Cd Length: 261  Bit Score: 60.31  E-value: 2.17e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  18 VVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNAMLS 97
Cdd:cd15327  12 LMAIVGNILVILSVACNRHLQT-VTNYFIVNLAIADLLLSTTVLPFSATLEVLGFWAFGRVFCDIWAAVDVLCCTASILS 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  98 MAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGYSHTYASCTVHLEDGsrlapYAAFTALF 177
Cdd:cd15327  91 LCVISVDRYVGVKHSLKYPTIMTERKAGVILVLLWVSSMVISIGPLLGWKEPPPPDESICSITEEPG-----YALFSSLF 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 178 HSssfllcllvlcfaYLKVLRVARSHCkRIDVItvqtllllvdihpsvkerclAQQKKRRQRATKKICIFIGSFVLCFSP 257
Cdd:cd15327 166 SF-------------YLPLMVILVMYF-RVYVV--------------------ALKFSREKKAAKTLAIVVGVFILCWFP 211
                       250
                ....*....|....
gi 47220248 258 YVVTRQLVELIPSV 271
Cdd:cd15327 212 FFFVLPLGSFFPAL 225
7tmA_GPR84-like cd15210
G protein-coupled receptor 84 and similar proteins, member of the class A family of ...
11-305 2.60e-10

G protein-coupled receptor 84 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR84, also known as the inflammation-related G-Protein coupled receptor EX33, is a receptor for medium-chain free fatty acid (FFA) with carbon chain lengths of C9 to C14. Among these medium-chain FFAs, capric acid (C10:0), undecanoic acid (C11:0), and lauric acid (C12:0) are the most potent endogenous agonists of GPR84, whereas short-chain and long-chain saturated and unsaturated FFAs do not activate this receptor. GPR84 contains a [G/N]RY-motif instead of the highly conserved Asp-Arg-Tyr (DRY) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors and important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, which then activate the heterotrimeric G proteins. In the case of GPR84, activation of the receptor couples to a pertussis toxin sensitive G(i/o)-protein pathway. GPR84 knockout mice showed increased Th2 cytokine production including IL-4, IL-5, and IL-13 compared to wild-type mice. It has been also shown that activation of GPR84 augments lipopolysaccharide-stimulated IL-8 production in polymorphonuclear leukocytes and TNF-alpha production in macrophages, suggesting that GPR84 may function as a proinflammatory receptor.


Pssm-ID: 320338 [Multi-domain]  Cd Length: 254  Bit Score: 59.97  E-value: 2.60e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  11 VCVLVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFL 90
Cdd:cd15210   5 VWGIVFMVVGVPGNLLTVLALLRSKKLRT-RTNAFIINLSISDLLFCAFNLPLAASTFLHQAWIHGETLCRVFPLLRYGL 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  91 TTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGYSHTYA--SCTVHLEDGSRLA 168
Cdd:cd15210  84 VAVSLLTLVLITLNRYILIAHPSLYPRIYTRRGLALMIAGTWIFSFGSFLPLWLGIWGRFGLDPKvcSCSILRDKKGRSP 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 169 PYAAFTALFhsssfllcllvlcfaYLKVLRVARSHCKRIDVITVQTLLllvdihpsvkerclaqqkkrrqratkkiCIFI 248
Cdd:cd15210 164 KTFLFVFGF---------------VLPCLVIIICYARREDRRLTRMML----------------------------VIFL 200
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 47220248 249 gSFVLCFSPYVvtrqLVELIPSVHIPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRK 305
Cdd:cd15210 201 -CFLVCYLPIT----LVNVFDDEVAPPVLHIIAYVLIWLSSCINPIIYVAMNRQYRQ 252
7tmA_5-HT5 cd15328
serotonin receptor subtype 5, member of the class A family of seven-transmembrane G ...
41-303 2.68e-10

serotonin receptor subtype 5, member of the class A family of seven-transmembrane G protein-coupled receptors; 5-HT5 receptor, one of 14 mammalian 5-HT receptors, is activated by the neurotransmitter and peripheral signal mediator serotonin (also known as 5-hydroxytryptamine or 5-HT). The 5-HT5A and 5-HT5B receptors have been cloned from rat and mouse, but only the 5-HT5A isoform has been identified in human because of the presence of premature stop codons in the human 5-HT5B gene, which prevents a functional receptor from being expressed. 5-HT5 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/0) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320451 [Multi-domain]  Cd Length: 259  Bit Score: 59.96  E-value: 2.68e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  41 VPGIFILNLSFSNILLAAINMPTTFlgVAE-NGKPF--GDPFCQAASFAETFLTTNAMLSMAALSVDRWIAVVFPLSYSS 117
Cdd:cd15328  34 VPHNLVASMAVSDVLVAALVMPLSL--VHElSGRRWqlGRSLCQVWISFDVLCCTASIWNVTAIALDRYWSITRHLEYTL 111
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 118 KMRYRDALLMVAYSWLQSLGFSLTQLLMNWG-GYSHTYASCTVhledgSRLAPYAAFTALfhsSSFLLCLLVLCFAYLKV 196
Cdd:cd15328 112 RTRRRISNVMIALTWALSAVISLAPLLFGWGeTYSEDSEECQV-----SQEPSYTVFSTF---GAFYLPLCVVLFVYWKI 183
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 197 LRVArshckridvitvqtllllvdihpsvkerclaqqkKRRQRATKKICIFIGSFVLCFSPYVVTrQLVELIPSVHIPRY 276
Cdd:cd15328 184 YKAA----------------------------------QKEKRAALMVGILIGVFVLCWIPFFLT-ELISPLCSCDIPPI 228
                       250       260
                ....*....|....*....|....*..
gi 47220248 277 WGVTTKCLTYAKTSTDAFVYCLLRQQY 303
Cdd:cd15328 229 WKSIFLWLGYSNSFFNPLIYTAFNKNY 255
7tmA_TAAR5-like cd15317
trace amine-associated receptor 5 and similar receptors, member of the class A family of ...
11-307 3.00e-10

trace amine-associated receptor 5 and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Included in this group are mammalian TAAR5, TAAR6, TAAR8, TAAR9, and similar proteins. They are among the 15 identified trace amine-associated receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320440 [Multi-domain]  Cd Length: 290  Bit Score: 60.15  E-value: 3.00e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  11 VCVLvTAVVSLLTNLSVLLCYCQSSELrsHVPGIF-ILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETF 89
Cdd:cd15317   6 VLVL-AMLITVSGNLVVIISISHFKQL--HSPTNMlVLSLATADFLLGLCVMPFSMIRTVETCWYFGDLFCKFHTGLDLL 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  90 LTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLlmnwggYSHTYASCTVHLED-----G 164
Cdd:cd15317  83 LCTTSIFHLCFIAIDRYYAVCDPLRYPSKITVQVAWRFIAIGWLVPGIYTFGLI------YTGANDEGLEEYSSeiscvG 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 165 SRLAPYAAFTALFHSSSFLLCLLVLCFAYLKVLRVARSHCKRIDVITvqtllllvDIHPSVKERCLAQQKKRRQRATKKI 244
Cdd:cd15317 157 GCQLLFNKIWVLLDFLTFFIPCLIMIGLYAKIFLVARRQARKIQNME--------DKFRSSEENSSKASASRERKAAKTL 228
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47220248 245 CIFIGSFVLCFSPYvVTRQLVELIPSVHIPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRKVL 307
Cdd:cd15317 229 AIVMGIFLFCWLPY-FIDTIVDEYSNFITPAIVFDAVIWLGYFNSAFNPFIYAFFYPWFRKAF 290
7tmA_DmOct-betaAR-like cd15066
Drosophila melanogaster beta-adrenergic receptor-like octopamine receptors and similar ...
20-147 3.25e-10

Drosophila melanogaster beta-adrenergic receptor-like octopamine receptors and similar receptors in bilateria; member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila beta-adrenergic-like octopamine receptors and similar proteins. The biogenic amine octopamine is the invertebrate equivalent of vertebrate adrenergic neurotransmitters and exerts its effects through different G protein-coupled receptor types. Insect octopamine receptors are involved in the modulation of carbohydrate metabolism, muscular tension, cognition and memory. The activation of octopamine receptors mediating these actions leads to an increase in adenylate cyclase activity, thereby increasing cAMP levels. In Drosophila melanogaster, three subgroups have been classified on the basis of their structural homology and functional equivalents with vertebrate beta-adrenergic receptors: DmOctBeta1R, DmOctBeta2R, and DmOctBeta3R.


Pssm-ID: 320194 [Multi-domain]  Cd Length: 265  Bit Score: 59.70  E-value: 3.25e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  20 SLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFlGVAENGK-PFGDPFCQAASFAETFLTTNAMLSM 98
Cdd:cd15066  13 AIFGNLLVIISVMRHRKLRV-ITNYFVVSLAMADMLVALCAMTFNA-SVEITGRwMFGYFMCDVWNSLDVYFSTASILHL 90
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 47220248  99 AALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNW 147
Cdd:cd15066  91 CCISVDRYYAIVQPLEYPSKMTKRRVAIMLANVWISPALISFLPIFLGW 139
7tmA_Dop1R2-like cd15067
dopamine 1-like receptor 2 from Drosophila melanogaster and similar proteins, member of the ...
8-139 3.59e-10

dopamine 1-like receptor 2 from Drosophila melanogaster and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled dopamine 1-like receptor 2 is expressed in Drosophila heads and it shows significant sequence similarity with vertebrate and invertebrate dopamine receptors. Although the Drosophila Dop1R2 receptor does not cluster into the D1-like structural group, it does show pharmacological properties similar to D1-like receptors. As shown in vertebrate D1-like receptors, agonist stimulation of Dop1R2 activates adenylyl cyclase to increase cAMP levels and also generates a calcium signal through stimulation of phospholipase C.


Pssm-ID: 320195 [Multi-domain]  Cd Length: 262  Bit Score: 59.68  E-value: 3.59e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMP-TTFLGVAENGKPFGDPFCQAASFA 86
Cdd:cd15067   1 LLGVVLSLFCLVTVAGNLLVILAVLRERYLRT-VTNYFIVSLAVADLLVGSIVMPfSILHEMTGGYWLFGRDWCDVWHSF 79
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|...
gi 47220248  87 ETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFS 139
Cdd:cd15067  80 DVLASTASILNLCVISLDRYWAITDPISYPSRMTKRRALIMIALVWICSALIS 132
7tmA_GPR161 cd15214
orphan G protein-coupled receptor 161, member of the class A family of seven-transmembrane G ...
11-212 4.36e-10

orphan G protein-coupled receptor 161, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR161, an orphan GPCR, is a negative regulator of Sonic hedgehog (Shh) signaling, which promotes the processing of zinc finger protein GLI3 into its transcriptional repressor form (GLI3R) during neural tube development. In the absence of Shh, this proteolytic processing is normally mediated by cAMP-dependent protein kinase A (PKA). GPR161 is recruited to primary cilia by a mechanism depends on TULP3 (tubby-related protein 3) and the intraflagellar complex A (IFT-A). Moreover, Gpr161 knockout mice show phenotypes observed in Tulp3/IFT-A mutants, and cause increased Shh signaling in the neural tube. Taken together, GPR161 negatively regulates the PKA-dependent GLI3 processing in the absence of Shh signal by coupling to G(s) protein, which causes activation of adenylate cyclase, elevated cAMP levels, and activation of PKA. Conversely, in the presence of Shh, GPR161 is removed from the cilia by internalization into the endosomal recycling compartment, leading to downregulation of its activity and thereby allowing Shh signaling to proceed. In addition, GPR161 is over-expressed in triple-negative breast cancer (lacking estrogen receptor, progesterone receptor, and human epidermal growth factor receptor 2 (HER2) expression) and correlates with poor prognosis. Mutations of GPR161 have also been implicated as a novel cause for pituitary stalk interruption syndrome (PSIS), a rare congenital disease of the pituitary gland. GPR161 is a member of the class A family of GPCRs, which contains receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320342 [Multi-domain]  Cd Length: 261  Bit Score: 59.18  E-value: 4.36e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  11 VCVLVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFL 90
Cdd:cd15214   4 IAIIIIAILICLGNLVIVVTLYKKSYLLT-LSNKFVFSLTLSNLLLSVLVLPFVVTSSIRREWIFGVVWCNFSALLYLLI 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  91 TTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLmNWGG--YSHTYASCTV--HLEdgsr 166
Cdd:cd15214  83 SSASMLTLGAIAIDRYYAVLYPMVYPMKITGNRAVLALVYIWLHSLIGCLPPLF-GWSSleFDRFKWMCVAawHKE---- 157
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*..
gi 47220248 167 lapyAAFTALFHSSSFLLCLLVLCFAYLKVLRVAR-SHCKRIDVITV 212
Cdd:cd15214 158 ----AGYTAFWQVWCALLPFVVMLVCYGFIFRVARaNQCKAFITILV 200
7tmA_PR4-like cd15392
neuropeptide Y receptor-like found in insect and related proteins, member of the class A ...
18-145 4.52e-10

neuropeptide Y receptor-like found in insect and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes a novel G protein-coupled receptor (also known as PR4 receptor) from Drosophila melanogaster, which can be activated by the members of the neuropeptide Y (NPY) family, including NPY, peptide YY (PYY) and pancreatic polypeptide (PP), when expressed in Xenopus oocytes. These homologous peptides of 36-amino acids in length contain a hairpin-like structural motif, which referred to as the pancreatic polypeptide fold, and function as gastrointestinal hormones and neurotransmitters. The PR4 receptor also shares strong sequence homology to the mammalian tachykinin receptors (NK1R, NK2R, and NK3R), whose endogenous ligands are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB), respectively. The tachykinins function as excitatory transmitters on neurons and cells in the gastrointestinal tract.


Pssm-ID: 320514 [Multi-domain]  Cd Length: 287  Bit Score: 59.30  E-value: 4.52e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  18 VVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGV-AENGKPFGDPFCQAASFAETFLTTNAML 96
Cdd:cd15392  12 VLAVGGNGLVCYIVVSYPRMRT-VTNYFIVNLALSDILMAVFCVPFSFIALlILQYWPFGEFMCPVVNYLQAVSVFVSAF 90
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 47220248  97 SMAALSVDRWIAVVFPLsySSKMRYRDALLMVAYSWLQSLGFSLTQLLM 145
Cdd:cd15392  91 TLVAISIDRYVAIMWPL--RPRMTKRQALLLIAVIWIFALATALPIAIT 137
7tmA_NPR-like_invertebrate cd15391
invertebrate neuropeptide receptor-like, member of the class A family of seven-transmembrane G ...
8-145 4.87e-10

invertebrate neuropeptide receptor-like, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes putative neuropeptide receptor found in invertebrates, which is a member of class A of 7-transmembrane G protein-coupled receptors. This orphan receptor shares a significant amino acid sequence identity with the neurokinin 1 receptor (NK1R). The endogenous ligand for NK1R is substance P, an 11-amino acid peptide that functions as a vasodilator and neurotransmitter and is released from the autonomic sensory nerve fibers.


Pssm-ID: 320513 [Multi-domain]  Cd Length: 289  Bit Score: 59.45  E-value: 4.87e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRSHVPGiFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAE 87
Cdd:cd15391   2 HLINLYQSTIFLSVGGNYSVIVVFYDGRRSRTDLNY-YLINLAVSDLIMALFCMPFTFTQIMLGHWVFPAPMCPIVLYVQ 80
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVFPLsySSKMRYRDALLMVAYSWLQSLGFSLTQLLM 145
Cdd:cd15391  81 LVSVTASVLTNTAIGIDRFFAVIFPL--RSRHTKSRTKCIIASIWAISFSLSSVQLFA 136
7tmA_Glycoprotein_LRR_R-like cd14980
glycoprotein hormone receptors and leucine-rich repeats containing G protein-coupled receptors, ...
7-140 5.46e-10

glycoprotein hormone receptors and leucine-rich repeats containing G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes the glycoprotein hormone receptors (GPHRs), vertebrate receptors containing 17 leucine-rich repeats (LGR4-6), and the relaxin family peptide receptors (also known as LGR7 and LGR8). They are seven transmembrane domain receptors with a very large extracellular N-terminal domain containing many leucine-rich repeats responsible for hormone recognition and binding. The glycoprotein hormone receptor family contains receptors for the pituitary hormones, thyrotropin (thyroid-stimulating hormone receptor), follitropin (follicle-stimulating hormone receptor), and lutropin (luteinizing hormone receptor). Glycoprotein hormone receptors couple primarily to the G(s)-protein and promotes cAMP production, but also to the G(i)- or G(q)-protein. Two orphan GPCRs, LGR7 and LGR8, have been recently identified as receptors for the relaxin peptide hormones.


Pssm-ID: 320111 [Multi-domain]  Cd Length: 286  Bit Score: 59.18  E-value: 5.46e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   7 FLLEVCVLVTAVVSLLTNLSVLLCYCQSSELRSHVPGIFILNLSFSNILLA------AINMPTTFLGVAENGKP-FGDPF 79
Cdd:cd14980   1 ISLRIFIWIIGILALIGNILVIIWHISSKKKKKKVPKLLIINLAIADFLMGiylliiAIADQYYRGRYAQYSEEwLRSPP 80
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 47220248  80 CQAASFAETFLTTNAMLSMAALSVDRWIAVVFPLSYsSKMRYRDALLMVAYSWLQSLGFSL 140
Cdd:cd14980  81 CLLACFLVSLSSLMSVLMMLLITLDRYICIVYPFSN-KRLSYKSAKIILILGWLFSIIFAA 140
7tmA_TAAR2_3_4 cd15312
trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family ...
40-261 1.22e-09

trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; TAAR2, TAAR3, and TAAR4 are among the 15 identified trace amine-associated receptor subtypes, which form a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320437 [Multi-domain]  Cd Length: 289  Bit Score: 58.13  E-value: 1.22e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  40 HVPGIF-ILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNAMLSMAALSVDRWIAVVFPLSYSSK 118
Cdd:cd15312  32 HSPTNFlILSLAITDFLLGFLVMPYSMVRSVESCWYFGDLFCKIHSSLDMMLSTTSIFHLCFIAVDRYYAVCDPLHYRTK 111
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 119 MRYRDALLMVAYSWLQSLGFSLTQLLMNWG-----GYSHTYA---SCTVHLEdgSRLAPYAAFTALFhsssflLCLLVLC 190
Cdd:cd15312 112 ITTPVIKVFLVISWSVPCLFAFGVVFSEVNlegieDYVALVSctgSCVLIFN--KLWGVIASLIAFF------IPGTVMI 183
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 47220248 191 FAYLKVLRVARSHCKRIDVITVQTLlllvdihPSVKERClaqQKKRRQRATKKICIFIGSFVLCFSPYVVT 261
Cdd:cd15312 184 GIYIKIFFVARKHAKVINNRPSVTK-------GDSKNKL---SKKKERKAAKTLSIVMGVFLLCWLPFFVA 244
7tmA_Adenosine_R cd14968
adenosine receptor subfamily, member of the class A family of seven-transmembrane G ...
14-147 1.53e-09

adenosine receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; The adenosine receptors (or P1 receptors), a family of G protein-coupled purinergic receptors, bind adenosine as their endogenous ligand. There are four types of adenosine receptors in human, designated as A1, A2A, A2B, and A3. Each type is encoded by a different gene and has distinct functions with some overlap. For example, both A1 and A2A receptors are involved in regulating myocardial oxygen consumption and coronary blood flow in the heart, while the A2A receptor also has a broad spectrum of anti-inflammatory effects in the body. These two receptors also expressed in the brain, where they have important roles in the release of other neurotransmitters such as dopamine and glutamate, while the A2B and A3 receptors found primarily in the periphery and play important roles in inflammation and immune responses. The A1 and A3 receptors preferentially interact with G proteins of the G(i/o) family, thereby lowering the intracellular cAMP levels, whereas the A2A and A2B receptors interact with G proteins of the G(s) family, activating adenylate cyclase to elevate cAMP levels.


Pssm-ID: 341316 [Multi-domain]  Cd Length: 285  Bit Score: 57.65  E-value: 1.53e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  14 LVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPttFLGVAENGKPFGDPFCQAASFAETFLTTN 93
Cdd:cd14968   8 VLIAVLSVLGNVLVIWAVKLNRALRT-VTNYFIVSLAVADILVGALAIP--LAILISLGLPTNFHGCLFMACLVLVLTQS 84
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....
gi 47220248  94 AMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQlLMNW 147
Cdd:cd14968  85 SIFSLLAIAIDRYLAIKIPLRYKSLVTGRRAWGAIAVCWVLSFLVGLTP-MFGW 137
7tmA_alpha1_AR cd15062
alpha-1 adrenergic receptors, member of the class A family of seven-transmembrane G ...
8-305 2.03e-09

alpha-1 adrenergic receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320190 [Multi-domain]  Cd Length: 261  Bit Score: 57.11  E-value: 2.03e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAE 87
Cdd:cd15062   2 VVGVALGAFILFAIGGNLLVILSVACNRHLRT-PTHYFIVNLAVADLLLSFTVLPFSATLEVLGYWAFGRIFCDVWAAVD 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGYSHTYASCTVHLEDGsrl 167
Cdd:cd15062  81 VLCCTASIMSLCVISVDRYIGVRYPLNYPTIVTARRATVALLIVWVLSLVISIGPLLGWKEPAPADEQACGVNEEPG--- 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 168 apYAAFTALfhsssfllcllvlCFAYLKVLRVARSHCkRIDVItvqtllllvdihpsvkerclAQQKKRRQRATKKICIF 247
Cdd:cd15062 158 --YVLFSSL-------------GSFYLPLAIILVMYC-RVYVV--------------------AFKFSREKKAAKTLGIV 201
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 47220248 248 IGSFVLCFSPYVVTRQLVELIPSVHIPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRK 305
Cdd:cd15062 202 VGAFVLCWFPFFVVLPLGSLFSTLKPPEPVFKVVFWLGYFNSCLNPIIYPCSSREFKR 259
7tmA_alpha2_AR cd15059
alpha-2 adrenergic receptors, member of the class A family of seven-transmembrane G ...
13-307 4.53e-09

alpha-2 adrenergic receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320187 [Multi-domain]  Cd Length: 261  Bit Score: 56.20  E-value: 4.53e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  13 VLVTAVVSLLT---NLSVLLCYCQSSELRSHvPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETF 89
Cdd:cd15059   4 SSIVSVVILLIivgNVLVIVAVLTSRKLRAP-QNWFLVSLAVADILVGLLIMPFSLVNELMGYWYFGSVWCEIWLALDVL 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  90 LTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLM--NWGGYSHTYASCTVhledgSRL 167
Cdd:cd15059  83 FCTASIVNLCAISLDRYWSVTQAVEYNLKRTPRRAKAMIAAVWIISAVISLPPLFGwkDEQPWHGAEPQCEL-----SDD 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 168 APYAAFTALfhsSSFLLCLLVLCFAYLKVLRVARShckridvitvqtllllvdihpsvKERclaqqkkrrqRATKKICIF 247
Cdd:cd15059 158 PGYVLFSSI---GSFYIPLLIMIIVYARIYRAAKR-----------------------KER----------RFTLVLGVV 201
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 248 IGSFVLCFSPYVVTRQLVELIPSVHIPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRKVL 307
Cdd:cd15059 202 MGAFVLCWLPFFFTYPLVVVCKTCGVPELLFKFFFWLGYCNSALNPVIYTIFNKDFRRAF 261
7tmA_5-HT2_insect-like cd15307
serotonin receptor subtype 2 from insects, member of the class A family of seven-transmembrane ...
14-312 4.86e-09

serotonin receptor subtype 2 from insects, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320433 [Multi-domain]  Cd Length: 279  Bit Score: 56.50  E-value: 4.86e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  14 LVTAVVSLLTNL-SVLLCYCQSSELR-SHVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLT 91
Cdd:cd15307   5 LLALVLVLGTAAgNILVCLAIAWERRlQNVTNYFLMSLAITDLMVAVLVMPLGILTLVKGHFPLSSEHCLTWICLDVLFC 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  92 TNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMnwggYSHTYASCTVhleDGSRLAPYA 171
Cdd:cd15307  85 TASIMHLCTISVDRYLSLRYPMRFGRNKTRRRVTLKIVFVWLLSIAMSLPLSLM----YSKDHASVLV---NGTCQIPDP 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 172 AFTALFhsssfllcllvlcfaylkvlrvarshckriDVITVQTLLLLVDIHPSVKERCLAQQKKR-------RQRATKKI 244
Cdd:cd15307 158 VYKLVG------------------------------SIVCFYIPLGVMLLTYCLTVRLLARQRSRhgriirlEQKATKVL 207
                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 245 CIFIGSFVLCFSPYVVTRQLVELIPSV--HIPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRKVLVNIIR 312
Cdd:cd15307 208 GVVFFTFVILWSPFFVLNLLPTVCAECeeRISHWVFDVVTWLGYASSMVNPIFYTIFNKVFRQAFKKVLL 277
7tmA_LPAR4 cd15155
lysophosphatidic acid receptor 4, member of the class A family of seven-transmembrane G ...
15-307 4.87e-09

lysophosphatidic acid receptor 4, member of the class A family of seven-transmembrane G protein-coupled receptors; Lysophosphatidic acid receptor 4 (LPAR4) is a G protein-coupled receptor that binds and is activated by the bioactive lipid lysophosphatidic acid (LPA), which is released by activated platelets and constitutively found in serum. Phylogenetic analysis of the class A GPCRs shows that LAPR4 is classified into the cluster consisting receptors that are preferentially activated by adenosine and uridine nucleotides. Although LPA6 (P2Y5) is expressed in human hair follicle cells, LPA4 and LPA5 are not. These three receptors are highly homologous and mediate an increase in intracellular cAMP production. Activation of LPAR5 is coupled to G(12/13) proteins, leading to neurite retraction and stress fiber formation, whereas coupling to G(q) protein leads to increases in calcium levels.


Pssm-ID: 320283 [Multi-domain]  Cd Length: 283  Bit Score: 56.47  E-value: 4.87e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  15 VTAVVSLLTNLSVLLCYCQSSELRSHVpGIFILNLSFSNiLLAAINMPTTFLGVAENGKPFGDPFCQAASFAetFLTT-- 92
Cdd:cd15155   9 VVFILGLITNCASLFVFCFRMKMRNET-AIFMTNLAVSD-LLFVFTLPFKIFYNFNRHWPFGDSLCKISGTA--FLTNiy 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  93 NAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGYSHTYASCTVHLEDGSRLAPYAA 172
Cdd:cd15155  85 GSMLFLTCISVDRFLAIVYPFRSRTIRTRRNSAIVCAGVWILVLSGGISASLFSTTNVSNTSTTCFEGFSKSIWKTYLSK 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 173 FTALFHSSSFLLCLLVLCFAYLKVLRVARshckridvitvqtllllvdihpsvKERCLAQQKKRRQRATKKICIFIGSFV 252
Cdd:cd15155 165 ITIFIEVVGFIIPLLLNLTCSSLVLRTLR------------------------KPATLSQIGTNKEKVLKMILVHVAIFV 220
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47220248 253 LCFSPYVVTRQLVELIPSVHI--------PRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRKVL 307
Cdd:cd15155 221 VCFVPYNSILFLYALVRSQAIancgverfARTMYPITLCLATLNCCFDPFVYYFTSESFQKSF 283
7tmA_Gal1_R cd15098
galanin receptor subtype 1, member of the class A family of seven-transmembrane G ...
44-305 5.34e-09

galanin receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Three receptors subtypes have been so far identified: GAL1, GAL2, and GAL3. The specific functions of each subtype remains mostly unknown, although galanin is thought to be involved in a variety of neuronal functions such as hormone release and food intake. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, depression, eating disorders, epilepsy and stroke, among many others.


Pssm-ID: 320226 [Multi-domain]  Cd Length: 282  Bit Score: 56.27  E-value: 5.34e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  44 IFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCqaaSFAETFLTTNAMLS---MAALSVDRWIAVVFPLSYSSKMR 120
Cdd:cd15098  39 VFILNLSIADLFFLLFCVPFQATIYSLPEWVFGAFMC---KFVHYFFTVSMLVSiftLVAMSVDRYIAVVHSRTSSSLRT 115
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 121 YRDALLMVAYSWLQSLGFS----LTQLLMNWGGYS-HTYasCTVHLEDGSRLAPYAAFTALFhsssfllcllvlcfAYLK 195
Cdd:cd15098 116 RRNALLGVLVIWVLSLAMAspvaVHQDLVHHWTASnQTF--CWENWPEKQQKPVYVVCTFVF--------------GYLL 179
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 196 VLRvarshckridVITVQTLLLLVDIHPSVKERcLAQQKKRRQRATKKICIFIGSFVLCFSPYVVTRQLVEL--IPSVHI 273
Cdd:cd15098 180 PLL----------LITFCYAKVLNHLHKKLKNM-SKKSERSKKKTAQTVLVVVVVFGISWLPHHIIHLWVEFgdFPLTQA 248
                       250       260       270
                ....*....|....*....|....*....|..
gi 47220248 274 PRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRK 305
Cdd:cd15098 249 SFVLRITAHCLAYANSCVNPIIYAFLSENFRK 280
7tmA_NTSR-like cd14979
neurotensin receptors and related G protein-coupled receptors, member of the class A family of ...
13-306 5.61e-09

neurotensin receptors and related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes the neurotensin receptors and related G-protein coupled receptors, including neuromedin U receptors, growth hormone secretagogue receptor, motilin receptor, the putative GPR39 and the capa receptors from insects. These receptors all bind peptide hormones with diverse physiological effects. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320110 [Multi-domain]  Cd Length: 300  Bit Score: 56.21  E-value: 5.61e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  13 VLVTA------VVSLLTNLSVLLCYCQSSELRSHVpGIFILNLSFSNILLAAINMPTTFLgVAENGKP--FGDPFCQAAS 84
Cdd:cd14979   1 VLVTAiyvaifVVGIVGNLLTCIVIARHKSLRTTT-NYYLFSLAVSDLLILLVGLPVELY-NFWWQYPwaFGDGGCKLYY 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  85 FAETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLmnWGGYSHTYASCTVHLEDG 164
Cdd:cd14979  79 FLFEACTYATVLTIVALSVERYVAICHPLKAKTLVTKRRVKRFILAIWLVSILCAIPILF--LMGIQYLNGPLPGPVPDS 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 165 SR---LAPYAAFTALFHSSSFLLCLLVLCFAYLKVLRVARShckridvITVQTLLLLVDIHPSVKERCLAQQKKRRQRAT 241
Cdd:cd14979 157 AVctlVVDRSTFKYVFQVSTFIFFVLPMFVISILYFRIGVK-------LRSMRNIKKGTRAQGTRNVELSLSQQARRQVV 229
                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 242 KKICIFIGSFVLCFSPYVVTRQLVELIPSVHIPRYWG-----VTTKCLTYAKTSTDAFVYCLLRQQYRKV 306
Cdd:cd14979 230 KMLGAVVIAFFVCWLPFHAQRLMFSYASKEDTFLFDFyqylyPISGILFYLSSAINPILYNLMSSRFRVA 299
7tmA_Octopamine_R cd15063
octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G ...
8-135 6.93e-09

octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein coupled receptor for octopamine (OA), which functions as a neurotransmitter, neurohormone, and neuromodulator in invertebrate nervous system. Octopamine (also known as beta, 4-dihydroxyphenethylamine) is an endogenous trace amine that is highly similar to norepinephrine, but lacks a hydroxyl group, and has effects on the adrenergic and dopaminergic nervous systems. Based on the pharmacological and signaling profiles, the octopamine receptors can be classified into at least two groups: OA1 receptors elevate intracellular calcium levels in muscle, whereas OA2 receptors activate adenylate cyclase and increase cAMP production.


Pssm-ID: 320191 [Multi-domain]  Cd Length: 266  Bit Score: 55.58  E-value: 6.93e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVtaVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAE 87
Cdd:cd15063   4 LLVLTFLN--VLVVLGNLLVIAAVLCSRKLRT-VTNLFIVSLACADLLVGTLVLPFSAVNEVLDVWIFGHTWCQIWLAVD 80
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*...
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQS 135
Cdd:cd15063  81 VWMCTASILNLCAISLDRYLAITRPIRYPSLMSTKRAKCLIAGVWVLS 128
7tmA_Mel1C cd15401
melatonin receptor subtype 1C, member of the class A family of seven-transmembrane G ...
9-305 1.15e-08

melatonin receptor subtype 1C, member of the class A family of seven-transmembrane G protein-coupled receptors; Melatonin (N-acetyl-5-methoxytryptamine) is a naturally occurring sleep-promoting chemical found in vertebrates, invertebrates, bacteria, fungi, and plants. In mammals, melatonin is secreted by the pineal gland and is involved in regulation of circadian rhythms. Its production peaks during the nighttime, and is suppressed by light. Melatonin is shown to be synthesized in other organs and cells of many vertebrates, including the Harderian gland, leukocytes, skin, and the gastrointestinal (GI) tract, which contains several hundred times more melatonin than the pineal gland and is involved in the regulation of GI motility, inflammation, and sensation. Melatonin exerts its pleiotropic physiological effects through specific membrane receptors, named MT1A, MT1B, and MT1C, which belong to the class A rhodopsin-like G-protein coupled receptor family. MT1A and MT1B subtypes are present in mammals, whereas MT1C subtype has been found in amphibians and birds. The melatonin receptors couple to G proteins of the G(i/o) class, leading to the inhibition of adenylate cyclase.


Pssm-ID: 320523 [Multi-domain]  Cd Length: 279  Bit Score: 55.30  E-value: 1.15e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   9 LEVCVLVTAVVSLLTNLSVLLCYCQSSELRShvPG-IFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAE 87
Cdd:cd15401   3 LAGVLIFTIVVDVLGNLLVILSVLRNKKLRN--AGnIFVVSLSVADLVVAVYPYPLILLAIFHNGWTLGNIHCQISGFLM 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGYSHTYASCTVHLEDGSrl 167
Cdd:cd15401  81 GLSVIGSVFNITAIAINRYCYICHSLRYDKLYNMKKTCCYVCLTWVLTLAAIVPNFFVGSLQYDPRIYSCTFAQTVSS-- 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 168 apyaAFTALFHSSSFLLCLLVLCFAYLKVlrvarshckridvitvqtLLLLVDIHPSVKERCLAQQKKRRQRATKKICIF 247
Cdd:cd15401 159 ----SYTITVVVVHFIVPLSIVTFCYLRI------------------WVLVIQVKHRVRQDSKQKLKANDIRNFLTMFVV 216
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 47220248 248 IGSFVLCFSPYVVTRQLVELIPS---VHIPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRK 305
Cdd:cd15401 217 FVLFAVCWGPLNFIGLAVAINPLkvaPKIPEWLFVLSYFMAYFNSCLNAVIYGVLNQNFRK 277
7tmA_GPR83 cd15389
G protein-coupled receptor 83, member of the class A family of seven-transmembrane G ...
7-140 1.82e-08

G protein-coupled receptor 83, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR83, also known as GPR72, is widely expressed in the brain, including hypothalamic nuclei which is involved in regulating energy balance and food intake. The hypothalamic expression of GPR83 is tightly regulated in response to nutrient availability and is decreased in obese mice. A recent study suggests that GPR83 has a critical role in the regulation of systemic energy metabolism via ghrelin-dependent and ghrelin-independent mechanisms. GPR83 shares a significant amino acid sequence identity with the tachykinin receptors, however its endogenous ligand is unknown.


Pssm-ID: 320511 [Multi-domain]  Cd Length: 285  Bit Score: 54.65  E-value: 1.82e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   7 FLLEVCVLVTAVVSLLTNlsVLLCYCQSSELRSH-VPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASF 85
Cdd:cd15389   1 ALLIVAYSIIIVISLFGN--SLVCHVIFKNKRMHtATNLFIVNLAVSDILITLLNTPFTLVRFVNSTWVFGKIMCHLSRF 78
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*
gi 47220248  86 AETFLTTNAMLSMAALSVDRWIAVVFPLsySSKMRYRDALLMVAYSWLQSLGFSL 140
Cdd:cd15389  79 AQYCSVYVSTLTLTAIALDRHRVILHPL--KPRITPCQGVVVIAIIWIMASCLSL 131
7tmA_VA_opsin cd15082
non-visual VA (vertebrate ancient) opsins, member of the class A family of seven-transmembrane ...
8-307 1.85e-08

non-visual VA (vertebrate ancient) opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; The vertebrate ancient (VA) opsin photopigments were originally identified in salmon and they appear to have diverged early in the evolution of vertebrate opsins. VA opsins are localized in the inner retina and the brain in teleosts. The vertebrate non-visual opsin family includes pinopsins, parapinopsin, VA (vertebrate ancient) opsins, and parietopsins. These non-visual opsins are expressed in various extraretinal tissues and/or in non-rod, non-cone retinal cells. They are thought to be involved in light-dependent physiological functions such as photo-entrainment of circadian rhythm, photoperiodicity, and body color change. The VA opsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320210 [Multi-domain]  Cd Length: 291  Bit Score: 54.80  E-value: 1.85e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRSHVPGIfILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAE 87
Cdd:cd15082  15 VLAALMFVVTSLSLAENFAVMLVTFRFKQLRQPLNYI-IVNLSVADFLVSLTGGTISFLTNARGYFFLGVWACVLEGFAV 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVFPLSySSKMRYRDALLMVAYSWLQSLGFSLTQLlMNWGGYSHTYASCTVHLEDGSRL 167
Cdd:cd15082  94 TFFGIVALWSLAVLAFERFFVICRPLG-NIRLQGKHAALGLLFVWTFSFIWTIPPV-LGWSSYTVSKIGTTCEPNWYSGN 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 168 APYAAFTALFHSSSFLLCLLVLCFAYLKVLRVARShckridvitvqtllllvdihPSVKERCLAQQKKRRQRATKKICIF 247
Cdd:cd15082 172 MHDHTYIITFFTTCFILPLGVIFVSYGKLLQKLRK--------------------VSNTQGRLGNARKPERQVTRMVVVM 231
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47220248 248 IGSFVLCFSPYVVTRQLVELIPSVHI-PRYWGVTTkclTYAKTST--DAFVYCLLRQQYRKVL 307
Cdd:cd15082 232 IVAFMVCWTPYAAFSILVTAHPTIHLdPRLAAIPA---FFSKTAAvyNPIIYVFMNKQFRKCL 291
7tmA_TACR-like cd15202
tachykinin receptors and related receptors, member of the class A family of ...
8-142 1.91e-08

tachykinin receptors and related receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the neurokinin/tachykinin receptors and its closely related receptors such as orphan GPR83 and leucokinin-like peptide receptor. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320330 [Multi-domain]  Cd Length: 288  Bit Score: 54.43  E-value: 1.91e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNlsVLLCYCQSSELRSH-VPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFA 86
Cdd:cd15202   2 LLIVAYSFIIVFSLFGN--VLVCWIIFKNQRMRtVTNYFIVNLAVADIMITLFNTPFTFVRAVNNTWIFGLFMCHFSNFA 79
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 47220248  87 ETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYrdALLMVAYSWLQSLGFSLTQ 142
Cdd:cd15202  80 QYCSVHVSAYTLTAIAVDRYQAIMHPLKPRISKTK--AKFIIAVIWTLALAFALPH 133
7tmA_5-HT4 cd15056
serotonin receptor subtype 4, member of the class A family of seven-transmembrane G ...
18-261 2.00e-08

serotonin receptor subtype 4, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT4 subtype is a member of the serotonin receptor family that belongs to the class A G protein-coupled receptors, and binds the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the mammalian central nervous system (CNS). 5-HT4 receptors are selectively linked to G proteins of the G(s) family, which positively stimulate adenylate cyclase, causing cAMP formation and activation of protein kinase A. 5-HT4 receptor-specific agonists have been shown to enhance learning and memory in animal studies. Moreover, hippocampal 5-HT4 receptor expression has been reported to be inversely correlated with memory performance in humans. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320184 [Multi-domain]  Cd Length: 294  Bit Score: 54.42  E-value: 2.00e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  18 VVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNAMLS 97
Cdd:cd15056  12 LLTILGNLLVIVAVCTDRQLRK-KTNYFVVSLAVADLLVAVLVMPFGAIELVNNRWIYGETFCLVRTSLDVLLTTASIMH 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  98 MAALSVDRWIAVVF-PLSYssKMRYRDALLMVAYSWLQSLGFSLTQLLMNWG--GYSHTYASCTVHLEDGSRLAPYAAFT 174
Cdd:cd15056  91 LCCIALDRYYAICCqPLVY--KMTPLRVAVMLGGCWVIPTFISFLPIMQGWNhiGIEDLIAFNCASGSTSCVFMVNKPFA 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 175 ALFHSSSFLLCLLVLCFAYLKVLRVARSHCKRIDVitvqtlLLLVDIHPSVKERCLAQQKKRRQRATKKICIFIGSFVLC 254
Cdd:cd15056 169 IICSTVAFYIPALLMVLAYYRIYVAAREQAHQIRS------LQRAGSSNHEADQHRNSRMRTETKAAKTLGIIMGCFCVC 242

                ....*..
gi 47220248 255 FSPYVVT 261
Cdd:cd15056 243 WAPFFVT 249
7tmA_tmt_opsin cd15086
teleost multiple tissue (tmt) opsin, member of the class A family of seven-transmembrane G ...
8-160 2.06e-08

teleost multiple tissue (tmt) opsin, member of the class A family of seven-transmembrane G protein-coupled receptors; Teleost multiple tissue (tmt) opsins are homologs of encephalopsin. Mouse encephalopsin (or panopsin) is highly expressed in the brain and testes, whereas the teleost homologs are localized to multiple tissues. The exact functions of the encephalopsins and tmt-opsins are unknown. The vertebrate non-visual opsin family includes pinopsins, parapinopsin, VA (vertebrate ancient) opsins, and parietopsins. These non-visual opsins are expressed in various extra-retinal tissues and/or in non-rod, non-cone retinal cells. They are thought to be involved in light-dependent physiological functions such as photo-entrainment of circadian rhythm, photoperiodicity and body color change. Tmt opsins belong to the class A of the G protein-coupled receptors and show strong homology to the vertebrate visual opsins.


Pssm-ID: 320214 [Multi-domain]  Cd Length: 276  Bit Score: 54.36  E-value: 2.06e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRSHVpGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAE 87
Cdd:cd15086   2 VVAVFLGFILTFGFLNNLLVLVLFCKYKVLRSPI-NLLLLNISLSDLLVCVLGTPFSFAASTQGRWLIGEHGCRWYGFAN 80
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVFPlSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLmNWGGYSHTYA--SCTVH 160
Cdd:cd15086  81 SLFGIVSLISLAVLSYERYCTLLRP-TEADVSDYRKAWLGVGGSWLYSLLWTLPPLL-GWSSYGPEGPgtTCSVQ 153
7tmA_Histamine_H1R cd15050
histamine subtype H1 receptor, member of the class A family of seven-transmembrane G ...
13-306 3.95e-08

histamine subtype H1 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes histamine receptor subtype H1R, a member of histamine receptor family, which belongs to the class A of GPCRs. Histamine plays a key role as chemical mediator and neurotransmitter in various physiological and pathophysiological processes in the central and peripheral nervous system. Histamine exerts its functions by binding to four different G protein-coupled receptors (H1-H4). H1R selectively interacts with the G(q)-type G protein that activates phospholipase C and the phosphatidylinositol pathway. Antihistamines, a widely used anti-allergy medication, act on the H1 subtype and produce drowsiness as a side effect. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320178 [Multi-domain]  Cd Length: 263  Bit Score: 53.59  E-value: 3.95e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  13 VLVTAVVSLLT-NLSVLLCYCQSSELRSH-VPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFL 90
Cdd:cd15050   4 GIALSTISLITvILNLLVLYAVRTERKLHtVGNLYIVSLSVADLIVGAVVMPLNIVYLLESKWILGRPVCLFWLSMDYVA 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  91 TTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLqsLGFSLTQLLMNWggysHTYASctvhleDGSRLAPY 170
Cdd:cd15050  84 STASIFSLFILCIDRYRSVQQPLKYLKYRTKTRASLMISGAWL--LSFLWVIPILGW----HHFAR------GGERVVLE 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 171 AAFTALFHSSSFLLCLLVLCFAYLKVLRVARSHCKRIDVItvqtllllvdihpsvkerclaqqkKRRQRATKKICIFIGS 250
Cdd:cd15050 152 DKCETDFHDVTWFKVLTAILNFYIPSLLMLWFYAKIFKAV------------------------NRERKAAKQLGFIMAA 207
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 47220248 251 FVLCFSPYVVTRQLVELIPSVhIPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRKV 306
Cdd:cd15050 208 FILCWIPYFILFMVIAFCKNC-CNENLHMFTIWLGYINSTLNPFIYPLCNENFKKT 262
7tmA_Beta1_AR cd15958
beta-1 adrenergic receptors (adrenoceptors), member of the class A family of ...
14-297 4.88e-08

beta-1 adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; The beta-1 adrenergic receptor (beta-1 adrenoceptor), also known as beta-1 AR, is activated by adrenaline (epinephrine) and plays important roles in regulating cardiac function and heart rate. The human heart contains three subtypes of the beta AR: beta-1 AR, beta-2 AR, and beta-3 AR. Beta-1 AR and beta-2 AR, which expressed at about a ratio of 70:30, are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway. In contrast, beta-3 AR produces negative inotropic effects by activating inhibitory G(i) proteins. The aberrant expression of betrayers can lead to cardiac dysfunction such as arrhythmias or heart failure.


Pssm-ID: 320624 [Multi-domain]  Cd Length: 298  Bit Score: 53.37  E-value: 4.88e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  14 LVTAVVSLLT---NLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFL 90
Cdd:cd15958   5 LLMALIVLLIvagNVLVIVAIGRTQRLQT-LTNLFITSLACADLVMGLLVVPFGATLVVRGRWLYGSFFCELWTSVDVLC 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  91 TTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGYSHTYASCTVHLEDGSRLAPY 170
Cdd:cd15958  84 VTASIETLCVIAIDRYLAITSPFRYQSLLTRARAKGIVCTVWAISALVSFLPIMMHWWRDEDDQALKCYEDPGCCDFVTN 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 171 AAFTALFHSSSFLLCLLVLCFAYLKVLRVARSHCKRIDVITVQTLLLLVDIHPSVKERCLAQQKKRRQRATKKICIFIGS 250
Cdd:cd15958 164 RAYAIASSIISFYIPLLIMIFVYLRVYREAKKQIKKIDKCEGRFHNTLTGLGRKCKRRPSRILALREQKALKTLGIIMGV 243
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 47220248 251 FVLCFSPYVVTrQLVELIPSVHIPRYWGVTTKCLTYAKTSTDAFVYC 297
Cdd:cd15958 244 FTLCWLPFFLV-NVVNVFNRELVPDWLFVFFNWLGYANSAFNPIIYC 289
7tmA_GPR61_GPR62-like cd15220
G protein-coupled receptors 61 and 62, member of the class A family of seven-transmembrane G ...
11-177 7.01e-08

G protein-coupled receptors 61 and 62, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes the orphan receptors GPR61 and GPR62, which are both constitutively active and predominantly expressed in the brain. While GPR61 couples to G(s) subtype of G proteins, the signaling pathway and function of GPR 62 are unknown. GPR61-deficient mice displayed significant hyperphagia and heavier body weight compared to wild-type mice, suggesting that GPR61 is involved in the regulation of food intake and body weight. GPR61 transcript expression was found in the caudate, putamen, and thalamus of human brain, whereas GPR62 transcript expression was found in the basal forebrain, frontal cortex, caudate, putamen, thalamus, and hippocampus. Both receptors share the highest sequence homology with each other and comprise a conserved subgroup within the class A family of GPCRs, which includes receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, which then activate the heterotrimeric G proteins. Members of this subgroup contain [A/E]RY motif, a variant of the highly conserved Asp-Arg-Tyr (DRY) motif found in the third transmembrane helix (TM3) of the class A GPCRs and important for efficient G protein-coupled signal transduction.


Pssm-ID: 410633 [Multi-domain]  Cd Length: 264  Bit Score: 52.84  E-value: 7.01e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  11 VCVLVTAVVSLLTNLSVLLCYCQSSELRSHVpgiFILNLSFSNILLAAINMPTTFLGVAE--NGKPFGDPFCQAASFAET 88
Cdd:cd15220   4 FCMVLLDLTALVGNTAVMVVIAKTPHLRKFA---FVCHLCVVDLLAALLLMPLGILSSSPffLGVVFGEAECRVYIFLSV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  89 FLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLmNWGGYSHTYAS----CTVHLEDG 164
Cdd:cd15220  81 CLVSASILTISAISVERYYYIVHPMRYEVKMTIGLVAAVLVGVWVKALLLGLLPVL-GWPSYGGPAPIaarhCSLHWSHS 159
                       170
                ....*....|...
gi 47220248 165 SRLAPYAAFTALF 177
Cdd:cd15220 160 GHRGVFVVLFALV 172
7tmA_NPFFR cd15207
neuropeptide FF receptors, member of the class A family of seven-transmembrane G ...
8-145 7.52e-08

neuropeptide FF receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropeptide FF (NPFF) is a mammalian octapeptide that belongs to a family of neuropeptides containing an RF-amide motif at their C-terminus that have been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of these peptides are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R. NPFF has been shown to inhibit adenylate cyclase via the Gi protein coupled to NPFF1-R.


Pssm-ID: 320335 [Multi-domain]  Cd Length: 291  Bit Score: 52.62  E-value: 7.52e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAE 87
Cdd:cd15207   2 LFIVSYSLIFLLCVVGNVLVCLVVAKNPRMRT-VTNYFILNLAVSDLLVGVFCMPFTLVDNILTGWPFGDVMCKLSPLVQ 80
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVFPlsYSSKMRYRDALLMVAYSWLQSLGFSLTQLLM 145
Cdd:cd15207  81 GVSVAASVFTLVAIAVDRYRAVVHP--TEPKLTNRQAFVIIVAIWVLALAIMIPQALV 136
7tmA_Opioid_R-like cd14970
opioid receptors and related proteins, member of the class A family of seven-transmembrane G ...
4-305 8.04e-08

opioid receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes opioid receptors, somatostatin receptors, melanin-concentrating hormone receptors (MCHRs), and neuropeptides B/W receptors. Together they constitute the opioid receptor-like family, members of the class A G-protein coupled receptors. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and are involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others. G protein-coupled somatostatin receptors (SSTRs), which display strong sequence similarity with opioid receptors, binds somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. MCHR binds melanin concentrating hormone and is presumably involved in the neuronal regulation of food intake. Despite strong homology with somatostatin receptors, MCHR does not appear to bind somatostatin. Neuropeptides B/W receptors are primarily expressed in the CNS and stimulate the cortisol secretion by activating the adenylate cyclase- and the phospholipase C-dependent signaling pathways.


Pssm-ID: 320101 [Multi-domain]  Cd Length: 282  Bit Score: 52.68  E-value: 8.04e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   4 IPEFLLEVCVlvtavVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAInMPTTFLGVAENGKPFGDPFCQAA 83
Cdd:cd14970   3 IPAVYSVVCV-----VGLTGNSLVIYVILRYSKMKT-VTNIYILNLAVADELFLLG-LPFLATSYLLGYWPFGEVMCKIV 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  84 SFAETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLtqllmnwggySHTYASCTVHLED 163
Cdd:cd14970  76 LSVDAYNMFTSIFCLTVMSVDRYLAVVHPVKSLRFRTPRKAKLVSLCVWALSLVLGL----------PVIIFARTLQEEG 145
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 164 GsrlapyaAFTALFHSSSFLLCLLVLCFAYLKVLRVARSHCkridVITVQTLLLLVDIHPSVK--ERCLAQQKKRRQRAT 241
Cdd:cd14970 146 G-------TISCNLQWPDPPDYWGRVFTIYTFVLGFAVPLL----VITVCYSLIIRRLRSSRNlsTSGAREKRRARRKVT 214
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 47220248 242 KKICIFIGSFVLCFSPYVVTrQLVELI---PSVHIPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRK 305
Cdd:cd14970 215 RLVLVVVAVFVVCWLPFHVF-QIVRLLidpPETLTVVGVFLFCIALSYANSCLNPILYAFLDENFRK 280
7tmA_D2-like_dopamine_R cd15053
D2-like dopamine receptors, member of the class A family of seven-transmembrane G ...
18-150 1.17e-07

D2-like dopamine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. In contrast, activation of D2-like family receptors is linked to G proteins of the G(i) family, which inhibit adenylate cyclase. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320181 [Multi-domain]  Cd Length: 263  Bit Score: 51.96  E-value: 1.17e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  18 VVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGK-PFGDPFCQAASFAETFLTTNAML 96
Cdd:cd15053  12 LLTVFGNVLVIMSVFRERSLQT-ATNYFIVSLAVADLLVAILVMPFAVYVEVNGGKwYLGPILCDIYIAMDVMCSTASIF 90
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*
gi 47220248  97 SMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLL-MNWGGY 150
Cdd:cd15053  91 NLCAISIDRYIAVTQPIKYARQKNSKRVLLTIAIVWVVSAAIACPLLFgLNNVPY 145
7tmA_NPFFR2 cd15980
neuropeptide FF receptor 2, member of the class A family of seven-transmembrane G ...
14-133 1.31e-07

neuropeptide FF receptor 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropeptide FF (NPFF) is a mammalian octapeptide that belongs to a family of neuropeptides containing an RF-amide motif at their C-terminus that have been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of these peptides are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R. NPFF has been shown to inhibit adenylate cyclase via the Gi protein coupled to NPFF1-R.


Pssm-ID: 320646 [Multi-domain]  Cd Length: 299  Bit Score: 52.20  E-value: 1.31e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  14 LVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTN 93
Cdd:cd15980   8 LLIFLLCMMGNGVVCFIVLRSKHMRT-VTNLFILNLAISDLLVGIFCMPTTLLDNIIAGWPFGSTVCKMSGMVQGISVSA 86
                        90       100       110       120
                ....*....|....*....|....*....|....*....|
gi 47220248  94 AMLSMAALSVDRWIAVVFPlsYSSKMRYRDALLMVAYSWL 133
Cdd:cd15980  87 SVFTLVAIAVDRFRCIVYP--FKQKLTISTAVVIIVIIWV 124
7tmA_RNL3R cd14976
relaxin-3 like peptide receptors, member of the class A family of seven-transmembrane G ...
8-307 1.41e-07

relaxin-3 like peptide receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This G protein-coupled receptor subfamily is composed of the relaxin-3 like peptide receptors, RNL3R1 and RNL3R2, and similar proteins. The relaxin-3 like peptide family includes relaxin-1, -2, -3, as well as insulin-like (INSL) peptides 3 to 6. RNL3/relaxin-3 and INSL5 are the endogenous ligands for RNL3R1 and RNL3R2, respectively. RNL3R1, also called GPCR135 or RXFP3, is predominantly expressed in the brain and is implicated in stress, anxiety, feeding, and metabolism. Insulin-like peptide 5 (INSL5), the endogenous ligand for RNL3R2 (also called GPCR142 or RXFP4), plays a role in fat and glucose metabolism. INSL5 is highly expressed in human rectal and colon tissues. Both RNL3R1 and RNL3R2 signal through G(i) protein and inhibit adenylate cyclase, thereby inhibit cAMP accumulation. RNL3R1 is shown to activate Erk1/2 signaling pathway.


Pssm-ID: 320107 [Multi-domain]  Cd Length: 290  Bit Score: 52.12  E-value: 1.41e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRSHVP-GIFILNLSFSNILLAainMPTTFLGVA---ENGKPFGDPFCQAA 83
Cdd:cd14976   2 LVSVVYMVVFTVGLLGNLLVLYLLKSNKKLRQQSEsNKFVFNLALTDLIFV---LTLPFWAVEyalDFVWPFGTAMCKVV 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  84 SFAETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLM---NWGGYSHTyaSCTVH 160
Cdd:cd14976  79 RYVTKLNMYSSIFFLTALSVTRYIAVARALKHGWIRKAFGAFATTIAIWAAAALAAIPEAIFstdTWSSVNHT--LCLLR 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 161 LEDGSRLAPYAAFTALFHsssfllcllvlcfaylkVLRVARSHCKRIDVITVQTLLLLVDIhpsvkERCLAQQKKRRQRA 240
Cdd:cd14976 157 FPKNSSVTRWYNWLGMYQ-----------------LQKVVLGFFLPLGIITLSYLLLLRFL-----QRKRGGSKRRKSRV 214
                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 47220248 241 TKKICIFIGSFVLCFSPYVVTRQLVELIPSVHIP---------RYWGVTTKCLTYAKTSTDAFVYCLLRQQYRKVL 307
Cdd:cd14976 215 TKSVFIVVLSFFICWLPNQALSLWSALIKFDDVPfsdaffafqTYAFPVAICLAHSNSCLNPVLYCLVRREFRDAL 290
7tmA_5-HT7 cd15329
serotonin receptor subtype 7, member of the class A family of seven-transmembrane G ...
13-305 1.45e-07

serotonin receptor subtype 7, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT7 receptor, one of 14 mammalian serotonin receptors, is a member of the class A of GPCRs and is activated by the neurotransmitter serotonin (5-hydroxytryptamine, 5-HT). 5-HT7 receptor mainly couples to Gs protein, which positively stimulates adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. 5-HT7 receptor is expressed in various human tissues, mainly in the brain, the lower gastrointestinal tract and in vital blood vessels including the coronary artery. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320452 [Multi-domain]  Cd Length: 260  Bit Score: 51.89  E-value: 1.45e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  13 VLVTAVVSLLT------NLSVLLCYCQSSELRsHVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFA 86
Cdd:cd15329   1 VLIGIVLLIIIlgtvvgNALVIIAVCLVKKLR-TPSNYLIVSLAVSDLLVALLVMPLAIIYELSGYWPFGEILCDVWISF 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  87 ETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLmNWGGYSHTYASCTVHLEDGSR 166
Cdd:cd15329  80 DVLLCTASILNLCAISVDRYLVITRPLTYAVKRTPKRMALMIAIVWLLSALISIPPLF-GWKNKVNDPGVCQVSQDFGYQ 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 167 LapYAAFTALFhsssflLCLLVLCFAYLKVLRVARSHCKridvitvqtllllvdihpsvkerclaqqkkrrqrATKKICI 246
Cdd:cd15329 159 I--YATFGAFY------IPLIVMLVLYYKIYRAAKSERK----------------------------------AIKTLGI 196
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47220248 247 FIGSFVLCFSPY---VVTRQLVELIPSVHIPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRK 305
Cdd:cd15329 197 IMGAFTLCWLPFfilALLRPFLKPIKCSCIPLWLSRLFLWLGYANSFLNPIIYAKFNREFRT 258
7tmA_Adenosine_R_A2A cd15068
adenosine receptor subtype A2A, member of the class A family of seven-transmembrane G ...
14-305 1.46e-07

adenosine receptor subtype A2A, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2A receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320196 [Multi-domain]  Cd Length: 293  Bit Score: 51.86  E-value: 1.46e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  14 LVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPttFLGVAENGkpfgdpFC---QAASFAETF- 89
Cdd:cd15068   8 LAIAVLAILGNVLVCWAVWLNSNLQN-VTNYFVVSLAAADIAVGVLAIP--FAITISTG------FCaacHGCLFIACFv 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  90 --LTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLmNW-------GGYSHTYASCTVH 160
Cdd:cd15068  79 lvLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPML-GWnncgqpkEGKNHSQGCGEGQ 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 161 LE---DGSRLAPYAAFTALFhsSSFLLCLLVLCFAYLKVLRVARSHCKRIDvitvqtllllVDIHPSVKERCLAQqkkRR 237
Cdd:cd15068 158 VAclfEDVVPMNYMVYFNFF--ACVLVPLLLMLGVYLRIFLAARRQLKQME----------SQPLPGERARSTLQ---KE 222
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 47220248 238 QRATKKICIFIGSFVLCFSPYVVTRQLVELIPSVHIPRYWGVTTK-CLTYAKTSTDAFVYCLLRQQYRK 305
Cdd:cd15068 223 VHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAiVLSHTNSVVNPFIYAYRIREFRQ 291
7tmA_Peropsin cd15073
retinal pigment epithelium-derived rhodopsin homolog, member of the class A family of ...
15-174 1.48e-07

retinal pigment epithelium-derived rhodopsin homolog, member of the class A family of seven-transmembrane G protein-coupled receptors; Peropsin, also known as a retinal pigment epithelium-derived rhodopsin homolog (RRH), is a visual pigment-like protein found exclusively in the apical microvilli of the retinal pigment epithelium. Peropsin belongs to the type 2 opsin family of the class A G-protein coupled receptors. Peropsin presumably plays a physiological role in the retinal pigment epithelium either by detecting light directly or monitoring the levels of retinoids, the primary light absorber in visual perception, or other pigment-related compounds in the eye.


Pssm-ID: 320201 [Multi-domain]  Cd Length: 280  Bit Score: 51.66  E-value: 1.48e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  15 VTAVVSLLTNLSVLLCYCQSSELRSHVpGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNA 94
Cdd:cd15073   9 VAGIISTISNGIVLVTFVKFRELRTPT-NALIINLAVTDLGVSIIGYPFSAASDLHGSWKFGYAGCQWYAFLNIFFGMAS 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  95 MLSMAALSVDRWIAVVFPlSYSSKMRYRDALLMVAYSWLQSLGFSLTQlLMNWGGYSH--TYASCTVHLEDGSRlaPYAA 172
Cdd:cd15073  88 IGLLTVVAVDRYLTICRP-DLGRKMTTNTYTVMILLAWTNAFFWAAMP-LVGWASYALdpTGATCTINWRKNDS--SFVS 163

                ..
gi 47220248 173 FT 174
Cdd:cd15073 164 YT 165
7tmA_ET_R-like cd14977
endothelin receptors and related proteins, member of the class A family of seven-transmembrane ...
14-136 1.50e-07

endothelin receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily of G-protein coupled receptors includes endothelin receptors, bombesin receptor subtype 3 (BRS-3), gastrin-releasing peptide receptor (GRPR), neuromedin B receptor (NMB-R), endothelin B receptor-like 2 (ETBR-LP-2), and GRP37. The endothelin receptors and related proteins are members of the seven transmembrane rhodopsin-like G-protein coupled receptor family (class A GPCRs) which activate multiple effectors via different types of G protein.


Pssm-ID: 320108 [Multi-domain]  Cd Length: 292  Bit Score: 52.04  E-value: 1.50e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  14 LVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTN 93
Cdd:cd14977   8 LVIFAVGIIGNLMVLCIVCTNYYMRS-VPNILIASLALGDLLLLLLCVPLNAYNLLTKDWLFGDVMCKLVPFIQVTSLGV 86
                        90       100       110       120
                ....*....|....*....|....*....|....*....|...
gi 47220248  94 AMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSL 136
Cdd:cd14977  87 TVFSLCALSIDRYRAAVNSMPMQTIGACLSTCVKLAVIWVGSV 129
7tmA_UII-R cd14999
urotensin-II receptor, member of the class A family of seven-transmembrane G protein-coupled ...
4-307 1.90e-07

urotensin-II receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The urotensin-II receptor (UII-R, also known as the hypocretin receptor) is a member of the class A rhodopsin-like G-protein coupled receptors, which binds the peptide hormone urotensin-II. Urotensin II (UII) is a vasoactive somatostatin-like or cortistatin-like peptide hormone. However, despite the apparent structural similarity to these peptide hormones, they are not homologous to UII. Urotensin II was first identified in fish spinal cord, but later found in humans and other mammals. In fish, UII is secreted at the back part of the spinal cord, in a neurosecretory centre called uroneurapophysa, and is involved in the regulation of the renal and cardiovascular systems. In mammals, urotensin II is the most potent mammalian vasoconstrictor identified to date and causes contraction of arterial blood vessels, including the thoracic aorta. The urotensin II receptor is a rhodopsin-like G-protein coupled receptor, which binds urotensin-II. The receptor was previously known as GPR14, or sensory epithelial neuropeptide-like receptor (SENR). The UII receptor is expressed in the CNS (cerebellum and spinal cord), skeletal muscle, pancreas, heart, endothelium and vascular smooth muscle. It is involved in the pathophysiological control of cardiovascular function and may also influence CNS and endocrine functions. Binding of urotensin II to the receptor leads to activation of phospholipase C, through coupling to G(q/11) family proteins. The resulting increase in intracellular calcium may cause the contraction of vascular smooth muscle.


Pssm-ID: 320130 [Multi-domain]  Cd Length: 282  Bit Score: 51.67  E-value: 1.90e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   4 IPEFLLEVCVlvtavVSLLTNLSVLLCYCQSSELRSHVPgIFILNLSFSNIL-LAAIN--MPTTFLgvaeNGKPFGDPFC 80
Cdd:cd14999   2 IGTVLSLMCV-----VGVAGNVYTLVVMCLSMRPRASMY-VYILNLALADLLyLLTIPfyVSTYFL----KKWYFGDVGC 71
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  81 QAAsFAETFLTTNA-MLSMAALSVDRWIAVVFPL-SYSSKMRYRDALLMVAysWLQSLGFSLTQLLMNW--GGYSHTYAS 156
Cdd:cd14999  72 RLL-FSLDFLTMHAsIFTLTVMSTERYLAVVKPLdTVKRSKSYRKLLAGVI--WLLSLLLTLPMAIMIRlvTVEDKSGGS 148
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 157 CTVHLEDGSRLAPYAAFTALFhssSFLLCLLVLCFAYLKVlRVARSHCkridviTVQTllllvdiHPSVKERclaqQKKR 236
Cdd:cd14999 149 KRICLPTWSEESYKVYLTLLF---STSIVIPGLVIGYLYI-RLARKYW------LSQA-------AASNSSR----KRLP 207
                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 47220248 237 RQRATKKICIFIGSFVLCFSPYVVTRQLV----ELIPSVHIPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRKVL 307
Cdd:cd14999 208 KQKVLKMIFTIVLVFWACFLPFWIWQLLYlyspSLSLSPRTTTYVNYLLTCLTYSNSCINPFLYTLLTKNYKEYL 282
7tmA_GPR101 cd15215
orphan G protein-coupled receptor 101, member of the class A family of seven-transmembrane G ...
13-212 2.01e-07

orphan G protein-coupled receptor 101, member of the class A family of seven-transmembrane G protein-coupled receptors; Gpr101, an orphan GPCR, is predominantly expressed in the brain within discrete nuclei and is predicted to couple to the stimulatory G(s) protein, a potent activator of adenylate cyclase. GPR101 has been implicated in mediating the actions of GnRH-(1-5), a pentapeptide formed by metallopeptidase cleavage of the decapeptide gonadotropin-releasing hormone (GnRH), which plays a critical role in the regulation of the hypothalamic-pituitary-gonadal axis. GnRH-(1-5) acts on GPR101 to stimulate epidermal growth factor (EFG) release and EFG-receptor (EGFR) phosphorylation, leading to enhanced cell migration and invasion in the Ishikawa endometrial cancer cell line. Furthermore, these effects of GnRH-(1-5) are also dependent on enzymatic activation of matrix metallopeptidase-9 (MMP-9). GPR101 is a member of the class A family of GPCRs, which includes receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320343 [Multi-domain]  Cd Length: 261  Bit Score: 51.38  E-value: 2.01e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  13 VLVTAVV--SLLTNLSVLLCYCQSSELRsHVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFL 90
Cdd:cd15215   4 VLIVIFLcaSLFGNIVLLLVFQRKPQLL-QVANRFIFNLLVADLLQTVLVMPWVIATSVPLFWPLDSHLCTALVVLMHLF 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  91 TTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSlTQLLMNWG--GYSHTYASCTVhledgsRLA 168
Cdd:cd15215  83 AFAGVNTIVVVSVDRYLAIIHPLSYPTKMTPRRGYLLIYGTWIVSVLQS-TPPLYGWGqaAFDERNALCSV------IWG 155
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*.
gi 47220248 169 PYAAFTALFHSSSFLLCLLVLCFAYLKVLRVARS--HCKRIDVITV 212
Cdd:cd15215 156 SSYSYTILSVVSSFVLPVIIMLACYSMVFRAARRcyHCKAAKVIFI 201
7tmA_OXR cd15208
orexin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
14-143 2.48e-07

orexin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Orexins (OXs, also referred to as hypocretins) are neuropeptide hormones that regulate the sleep-wake cycle and potently influence homeostatic systems regulating appetite and feeding behavior or modulating emotional responses such as anxiety or panic. OXs are synthesized as prepro-orexin (PPO) in the hypothalamus and then proteolytically cleaved into two forms of isoforms: orexin-A (OX-A) and orexin-B (OX-B). OXA is a 33 amino-acid peptide with N-terminal pyroglutamyl residue and two intramolecular disulfide bonds, whereas OXB is a 28 amino-acid linear peptide with no disulfide bonds. OX-A binds orexin receptor 1 (OX1R) with high-affinity, but also binds with somewhat low-affinity to OX2R, and signals primarily to Gq coupling, whereas OX-B shows a strong preference for the orexin receptor 2 (OX2R) and signals through Gq or Gi/o coupling. Thus, activation of OX1R or OX2R will activate phospholipase activity and the phosphatidylinositol and calcium signaling pathways. Additionally, OX2R activation can also lead to inhibition of adenylate cyclase.


Pssm-ID: 320336 [Multi-domain]  Cd Length: 303  Bit Score: 51.24  E-value: 2.48e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  14 LVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTN 93
Cdd:cd15208   8 ILVFIVGLVGNVLVCFAVWRNHHMRT-VTNYFIVNLSLADFLVIIICLPATLLVDVTETWFFGQVLCKIIPYLQTVSVSV 86
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|.
gi 47220248  94 AMLSMAALSVDRWIAVVFPLSY-SSKMRYRDALLMVaysWLQSLGFSLTQL 143
Cdd:cd15208  87 SVLTLSCIALDRWYAICHPLMFkSTAKRARVSILII---WIVSLLIMIPQA 134
7tmA_AstA_R_insect cd15096
allatostatin-A receptor in insects, member of the class A family of seven-transmembrane G ...
15-305 2.90e-07

allatostatin-A receptor in insects, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled AstA receptor binds allatostatin A. Three distinct types of allatostatin have been identified in the insects and crustaceans: AstA, AstB, and AstC. They both inhibit the biosynthesis of juvenile hormone and exert an inhibitory influence on food intake. Therefore, allatostatins are considered as potential targets for insect control.


Pssm-ID: 320224 [Multi-domain]  Cd Length: 284  Bit Score: 51.14  E-value: 2.90e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  15 VTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFaetFLTTNA 94
Cdd:cd15096   9 LIFIVGLIGNSLVILVVLSNQQMRS-TTNILILNLAVADLLFVVFCVPFTATDYVLPTWPFGDVWCKIVQY---LVYVTA 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  95 MLS---MAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGfSLTQLLMNWGGYSHTYASCTVHledgsrlapYA 171
Cdd:cd15096  85 YASvytLVLMSLDRYLAVVHPITSMSIRTERNTLIAIVGIWIVILV-ANIPVLFLHGVVSYGFSSEAYS---------YC 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 172 AFTALFHSSSFLLCLLVLCFAYLKVLRvarshckridVITVQTLLLLVDI--HPSVKERCLAQQKKRRQRATKKICIFIG 249
Cdd:cd15096 155 TFLTEVGTAAQTFFTSFFLFSYLIPLT----------LICVLYMLMLRRLrrQKSPGGRRSAESQRGKRRVTRLVVVVVV 224
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 47220248 250 SFVLCFSPY--VVTRQLVELIPSVHIPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRK 305
Cdd:cd15096 225 VFAICWLPIhiILLLKYYGVLPETVLYVVIQILSNCLAYGNSCVNPILYAFLSQNFRK 282
7tmA_Beta3_AR cd15959
beta-3 adrenergic receptors (adrenoceptors), member of the class A family of ...
15-297 3.52e-07

beta-3 adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; The beta-3 adrenergic receptor (beta-3 adrenoceptor), also known as beta-3 AR, is activated by adrenaline and plays important roles in regulating cardiac function and heart rate. The human heart contains three subtypes of the beta AR: beta-1 AR, beta-2 AR, and beta-3 AR. Beta-1 AR and beta-2 AR, which expressed at about a ratio of 70:30, are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway. In contrast, beta-3 AR produces negative inotropic effects by activating inhibitory G(i) proteins. The aberrant expression of betrayers can lead to cardiac dysfunction such as arrhythmias or heart failure.


Pssm-ID: 320625 [Multi-domain]  Cd Length: 302  Bit Score: 50.68  E-value: 3.52e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  15 VTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNA 94
Cdd:cd15959   9 LAILVIVGGNLLVIVAIAKTPRLQT-MTNVFVTSLACADLVMGLLVVPPGATILLTGHWPLGTTVCELWTSVDVLCVTAS 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  95 MLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGYSHTYASCTVHleDGSRLAPYAA-- 172
Cdd:cd15959  88 IETLCAIAVDRYLAITNPLRYEALVTKRRARTAVCLVWAISAAISFLPIMNQWWRDGADEEAQRCY--DNPRCCDFVTnm 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 173 -FTALFHSSSFLLCLLVLCFAYLKVLRVARSHCKRID---VITVQTLLLLVDIHPSVKERCLAQQKKRRQRATKKICIFI 248
Cdd:cd15959 166 pYAIVSSTVSFYVPLLVMIFVYVRVFVVATRQVRLIRkdkVRFPPEESPPAESRPACGRRPSRLLAIKEHKALKTLGIIM 245
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*....
gi 47220248 249 GSFVLCFSPYVVTRQLVELIPSVhIPRYWGVTTKCLTYAKTSTDAFVYC 297
Cdd:cd15959 246 GTFTLCWLPFFVANIIKVFCRSL-VPDPAFLFLNWLGYANSAFNPIIYC 293
7tmA_MCHR-like cd15088
melanin concentrating hormone receptor, member of the class A family of seven-transmembrane G ...
18-307 4.21e-07

melanin concentrating hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Melanin-concentrating hormone receptor (MCHR) binds melanin concentrating hormone and is presumably involved in the neuronal regulation of food intake and energy homeostasis. Despite strong homology with somatostatin receptors, MCHR does not appear to bind somatostatin. Two MCHRs have been characterized in vertebrates, MCHR1 and MCHR2. MCHR1 is expressed in all mammals, whereas MCHR2 is only expressed in the higher order mammals, such as humans, primates, and dogs, and is not found in rodents. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320216 [Multi-domain]  Cd Length: 278  Bit Score: 50.53  E-value: 4.21e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  18 VVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNiLLAAINMPTTFLGVAENGK-PFGDPFCQ-------AASFAETF 89
Cdd:cd15088  12 VVGLVGNGIVLYVLVRCSKLRT-APDIFIFNLAVAD-LLFMLGMPFLIHQFAIDGQwYFGEVMCKiitaldaNNQFTSTY 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  90 LttnamlsMAALSVDRWIAVVFPLSySSKMRYRD-ALLMVAYSWLQSLGFSL-TQLLMNWGGYSHTYASCTVHLEDGSRL 167
Cdd:cd15088  90 I-------LTAMSVDRYLAVVHPIR-STKYRTRFvAKLVNVGLWAASFLSILpVWVYSSLIYFPDGTTFCYVSLPSPDDL 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 168 APYAaftaLFHSSSFLLCLLVlcfaylkvlrvarshckridVITVQTLLLLVDIHPSVKERCLAQQKKRRQRATKKICIF 247
Cdd:cd15088 162 YWFT----IYHFILGFAVPLV--------------------VITVCYILILHRLARGVAPGNQSHGSSRTKRVTKMVILI 217
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47220248 248 IGSFVLCFSPYVVTrQLVELIPSVhiPRYWGVT----TKCLTYAKTSTDAFVYCLLRQQYRKVL 307
Cdd:cd15088 218 VVVFIVCWLPFHVV-QLVNLAMNR--PTLAFEVayflSICLGYANSCLNPFVYILVSENFRKRL 278
7tmA_leucokinin-like cd15393
leucokinin-like peptide receptor from tick and related proteins, member of the class A family ...
7-147 4.83e-07

leucokinin-like peptide receptor from tick and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes a leucokinin-like peptide receptor from the Southern cattle tick, Boophilus microplus, a pest of cattle world-wide. Leucokinins are invertebrate neuropeptides that exhibit myotropic and diuretic activity. This receptor is the first neuropeptide receptor known from the Acari and the second known in the subfamily of leucokinin-like peptide G-protein-coupled receptors. The other known leucokinin-like peptide receptor is a lymnokinin receptor from the mollusc Lymnaea stagnalis.


Pssm-ID: 320515 [Multi-domain]  Cd Length: 288  Bit Score: 50.48  E-value: 4.83e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   7 FLLEVCVLVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFA 86
Cdd:cd15393   1 VLLSILYGIISLVAVVGNFLVIWVVAKNRRMRT-VTNIFIANLAVADIIIGLFSIPFQFQAALLQRWVLPRFMCPFCPFV 79
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 47220248  87 ETFLTTNAMLSMAALSVDRWIAVVFPLsySSKMRYRDALLMVAYSWLQSLGFSLTQLLMNW 147
Cdd:cd15393  80 QVLSVNVSVFTLTVIAVDRYRAVIHPL--KARCSKKSAKIIILIIWILALLVALPVALALR 138
7tmA_SKR_NK2R cd16004
substance-K receptor, member of the class A family of seven-transmembrane G protein-coupled ...
18-142 4.86e-07

substance-K receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The substance-K receptor (SKR), also known as tachykinin receptor 2 (TACR2) or neurokinin A receptor or NK2R, is a G-protein coupled receptor that specifically binds to neurokinin A. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception.


Pssm-ID: 320670 [Multi-domain]  Cd Length: 285  Bit Score: 50.23  E-value: 4.86e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  18 VVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNAMLS 97
Cdd:cd16004  12 LVAVTGNATVIWIILAHRRMRT-VTNYFIVNLALADLSMAAFNTAFNFVYASHNDWYFGLEFCRFQNFFPITAMFVSIYS 90
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*
gi 47220248  98 MAALSVDRWIAVVFPLsySSKMRYRDALLMVAYSWLQSLGFSLTQ 142
Cdd:cd16004  91 MTAIAADRYMAIIHPF--KPRLSAGSTKVVIAGIWLVALALAFPQ 133
7tmA_Prostanoid_R cd14981
G protein-coupled receptors for prostanoids, member of the class A family of ...
18-144 4.98e-07

G protein-coupled receptors for prostanoids, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320112 [Multi-domain]  Cd Length: 288  Bit Score: 50.32  E-value: 4.98e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  18 VVSLLTNLSVLLCYCQSSelRSHVPGIF---ILNLSFSNILLAAINMPTTFLGVAENGK-PFGDPFCQAASFAETFLTTN 93
Cdd:cd14981  12 VFGVLGNLLALIVLARSS--KSHKWSVFyrlVAGLAITDLLGILLTSPVVLAVYASNFEwDGGQPLCDYFGFMMSFFGLS 89
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|.
gi 47220248  94 AMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLL 144
Cdd:cd14981  90 SLLIVCAMAVERFLAITHPFFYNSHVKKRRARLMLGAVWAFALLIASLPLL 140
7tmA_TAAR5 cd15318
trace amine-associated receptor 5, member of the class A family of seven-transmembrane G ...
11-307 5.58e-07

trace amine-associated receptor 5, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptor 5 is one of the 15 identified amine-activated G protein-coupled receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320441 [Multi-domain]  Cd Length: 282  Bit Score: 50.24  E-value: 5.58e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  11 VCVLVTAVVSLLTNLSVLLCYCQSSELRS-HVPGIF-ILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAET 88
Cdd:cd15318   2 VIYLACAIGMLIIVLGNLFVVVTVSHFKAlHTPTNFlLLSLALADMLLGLTVLPFSTIRSVESCWYFGDSFCRLHTCLDT 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  89 FLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLlmnwggYSHTYASCTVHLED----- 163
Cdd:cd15318  82 LFCLTSIFHLCFISIDRHCAICDPLLYPSKFTIRVACIFIAAGWLVPTVYTSVFL------YTKAVEEGLAELLTsvpcv 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 164 GSRLAPYAAFTALFHSSSFLLCLLVLCFAYLKVLRVARSHCKRIDVITvqtllllvdihpsvkeRCLAQQKKRRQRATKK 243
Cdd:cd15318 156 GSCQLLYNKLWGWLNFPVFFIPCLIMIGLYVKIFIVAKRQARAIASLL----------------SDTNGASKRERKAAKT 219
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47220248 244 ICIFIGSFVLCFSPYVVTrQLVELIPSVHIPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRKVL 307
Cdd:cd15318 220 LGIAVGVYLLCWLPFTID-TMVDSLLNFITPPLLFDIIIWFAYFNSACNPLIYVFSYPWFRKAL 282
7tmA_Mel1A cd15402
melatonin receptor subtype 1A, member of the class A family of seven-transmembrane G ...
12-305 7.47e-07

melatonin receptor subtype 1A, member of the class A family of seven-transmembrane G protein-coupled receptors; Melatonin (N-acetyl-5-methoxytryptamine) is a naturally occurring sleep-promoting chemical found in vertebrates, invertebrates, bacteria, fungi, and plants. In mammals, melatonin is secreted by the pineal gland and is involved in regulation of circadian rhythms. Its production peaks during the nighttime, and is suppressed by light. Melatonin is shown to be synthesized in other organs and cells of many vertebrates, including the Harderian gland, leukocytes, skin, and the gastrointestinal (GI) tract, which contains several hundred times more melatonin than the pineal gland and is involved in the regulation of GI motility, inflammation, and sensation. Melatonin exerts its pleiotropic physiological effects through specific membrane receptors, named MT1A, MT1B, and MT1C, which belong to the class A rhodopsin-like G-protein coupled receptor family. MT1A and MT1B subtypes are present in mammals, whereas MT1C subtype has been found in amphibians and birds. The melatonin receptors couple to G proteins of the G(i/o) class, leading to the inhibition of adenylate cyclase.


Pssm-ID: 320524 [Multi-domain]  Cd Length: 279  Bit Score: 49.90  E-value: 7.47e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  12 CVLV-TAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFL 90
Cdd:cd15402   5 CILIfTIVVDILGNLLVILSVYRNKKLRN-AGNIFVVSLAVADLVVAIYPYPLVLTSIFHNGWNLGYLHCQISGFLMGLS 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  91 TTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGYSHTYASCTVhleDGSRLAPY 170
Cdd:cd15402  84 VIGSIFNITGIAINRYCYICHSLKYDKLYSDKNSLCYVLLIWVLTVAAIVPNLFVGSLQYDPRIYSCTF---AQSVSSAY 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 171 AAFTALFHsssFLLCLLVLCFAYLKVlrvarshckridvitvqtLLLLVDIHPSVKERCLAQQKKRRQRATKKICIFIGS 250
Cdd:cd15402 161 TIAVVFFH---FILPIIIVTFCYLRI------------------WILVIQVRRRVKPDNKPKLKPHDFRNFVTMFVVFVL 219
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 47220248 251 FVLCFSPYVVTRQLVELIPSVHIPR---YWGVTTKCLTYAKTSTDAFVYCLLRQQYRK 305
Cdd:cd15402 220 FAVCWAPLNFIGLAVAVDPETIVPRipeWLFVASYYMAYFNSCLNAIIYGLLNQNFRR 277
7tmA_D3_dopamine_R cd15310
D3 subtype of the D2-like family of dopamine receptors, member of the class A family of ...
7-305 7.59e-07

D3 subtype of the D2-like family of dopamine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. Activation of D2-like family receptors is linked to G proteins of the G(i) family. This leads to a decrease in adenylate cyclase activity, thereby decreasing cAMP levels. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320436 [Multi-domain]  Cd Length: 259  Bit Score: 49.58  E-value: 7.59e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   7 FLLEVCVLVTAVVslLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMP-TTFLGVAENGKPFGDPFCQAASF 85
Cdd:cd15310   3 YALSYCALILAIV--FGNVLVCMAVLRERALQT-TTNYLVVSLAVADLLVATLVMPwVVYLEVTGGVWNFSRICCDVFVT 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  86 AETFLTTNAMLSMAALSVDRWIAVVFPLSY---SSKMRYRDALLMVAYSWLqsLGFSLTQLLMNWGGYSHTYASCTVHLE 162
Cdd:cd15310  80 LDVMMCTASILNLCAISIDRYTAVVMPVHYqhgTGQSSCRRVSLMITAVWV--LAFAVSCPLLFGFNTTGDPTVCSISNP 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 163 DGSRLAPYAAFTALFHSssfllcllvlcfaylkvlrvarshckridvitvqTLLLLVDIHPSVkerclaqqkKRRQRATK 242
Cdd:cd15310 158 DFVIYSSVVSFYLPFGV----------------------------------TLLVYVRIYVVL---------LREKKATQ 194
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47220248 243 KICIFIGSFVLCFSPYVVTRQLVELIPSVHIPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRK 305
Cdd:cd15310 195 MLAIVLGAFIVCWLPFFLTHILNTHCQACHVPPELYSATTWLGYVNSALNPVIYTTFNIEFRR 257
7tmA_mAChR_DM1-like cd15301
muscarinic acetylcholine receptor DM1, member of the class A family of seven-transmembrane G ...
11-136 1.01e-06

muscarinic acetylcholine receptor DM1, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes muscarinic acetylcholine receptor DM1-like from invertebrates. Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of mAChRs by agonist (acetylcholine) leads to a variety of biochemical and electrophysiological responses. In general, the exact nature of these responses and the subsequent physiological effects mainly depend on the molecular and pharmacological identity of the activated receptor subtype(s). All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320428 [Multi-domain]  Cd Length: 270  Bit Score: 49.44  E-value: 1.01e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  11 VCVLVTAVVSLLT---NLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAAsFAE 87
Cdd:cd15301   2 LIVIVAAVLSLVTvggNVMVMISFKIDKQLQT-ISNYFLFSLAVADFAIGVISMPLFTVYTALGYWPLGYEVCDTW-LAI 79
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|
gi 47220248  88 TFLTTNA-MLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSL 136
Cdd:cd15301  80 DYLASNAsVLNLLIISFDRYFSVTRPLTYRARRTTKKAAVMIASAWIISL 129
7tmA_OR12D-like cd15915
olfactory receptor subfamily 12D and related proteins, member of the class A family of ...
9-145 1.02e-06

olfactory receptor subfamily 12D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 12D and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320581 [Multi-domain]  Cd Length: 271  Bit Score: 49.23  E-value: 1.02e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   9 LEVCVLVTAVVSLLTNLSVLLCYCqsSELRSHVPGIFIL-NLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAE 87
Cdd:cd15915   3 LFVLFLLLYLASLLGNGAILAVVI--AEPRLHSPMYFFLgNLSCLDIFYSSVTVPKMLAGLLSEHKTISFQGCISQLHFF 80
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 47220248  88 TFL-TTNAMLsMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLM 145
Cdd:cd15915  81 HFLgSSEAML-LAVMAYDRYVAICNPLRYTVIMNPQVCLLLAVACWVTGFFHALMHTVM 138
7tmA_NKR_NK3R cd16003
neuromedin-K receptor, member of the class A family of seven-transmembrane G protein-coupled ...
19-113 1.06e-06

neuromedin-K receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The neuromedin-K receptor (NKR), also known as tachykinin receptor 3 (TACR3) or neurokinin B receptor or NK3R, is a G-protein coupled receptor that specifically binds to neurokinin B. The tachykinins (TKs) act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320669 [Multi-domain]  Cd Length: 282  Bit Score: 49.16  E-value: 1.06e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  19 VSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNAMLSM 98
Cdd:cd16003  13 VAVFGNLIVIWIILAHKRMRT-VTNYFLVNLAFSDASMAAFNTLINFIYALHSEWYFGEAYCRFHNFFPITSVFASIYSM 91
                        90
                ....*....|....*
gi 47220248  99 AALSVDRWIAVVFPL 113
Cdd:cd16003  92 TAIAVDRYMAIIDPL 106
7tmA_alpha1B_AR cd15326
alpha-1 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G ...
18-144 1.12e-06

alpha-1 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320449 [Multi-domain]  Cd Length: 261  Bit Score: 49.12  E-value: 1.12e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  18 VVSLLTNLSVLLCYCQSSELRSHVpGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNAMLS 97
Cdd:cd15326  12 LFAIVGNILVILSVVCNRHLRIPT-NYFIVNLAIADLLLSFTVLPFSATLEILGYWVFGRIFCDIWAAVDVLCCTASILS 90
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 47220248  98 MAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLL 144
Cdd:cd15326  91 LCAISIDRYIGVRHSLQYPTIVTRKRAILALLGVWVLSTVISIGPLL 137
7tmA_Mel1B cd15400
melatonin receptor subtype 1B, member of the class A family of seven-transmembrane G ...
9-305 1.47e-06

melatonin receptor subtype 1B, member of the class A family of seven-transmembrane G protein-coupled receptors; Melatonin (N-acetyl-5-methoxytryptamine) is a naturally occurring sleep-promoting chemical found in vertebrates, invertebrates, bacteria, fungi, and plants. In mammals, melatonin is secreted by the pineal gland and is involved in regulation of circadian rhythms. Its production peaks during the nighttime, and is suppressed by light. Melatonin is shown to be synthesized in other organs and cells of many vertebrates, including the Harderian gland, leukocytes, skin, and the gastrointestinal (GI) tract, which contains several hundred times more melatonin than the pineal gland and is involved in the regulation of GI motility, inflammation, and sensation. Melatonin exerts its pleiotropic physiological effects through specific membrane receptors, named MT1A, MT1B, and MT1C, which belong to the class A rhodopsin-like G-protein coupled receptor family. MT1A and MT1B subtypes are present in mammals, whereas MT1C subtype has been found in amphibians and birds. The melatonin receptors couple to G proteins of the G(i/o) class, leading to the inhibition of adenylate cyclase.


Pssm-ID: 320522 [Multi-domain]  Cd Length: 279  Bit Score: 48.70  E-value: 1.47e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   9 LEVCVLVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAET 88
Cdd:cd15400   3 LSSVLIFTTVVDILGNLLVIISVFRNRKLRN-SGNVFVVSLALADLVVALYPYPLVLVAIFHNGWALGEMHCKVSGFVMG 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  89 FLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGYSHTYASCTVHLEDGSRla 168
Cdd:cd15400  82 LSVIGSIFNITGIAINRYCYICHSFAYDKLYSRWNTLLYVCLIWALTVVAIVPNFFVGSLEYDPRIYSCTFVQTASSS-- 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 169 pYAAFTALFHsssfllcllvlcfaYLKVLRVARSHCKRIDVITVQtllllvdIHPSVKERCLAQQKKRRQRATKKICIFI 248
Cdd:cd15400 160 -YTIAVVVIH--------------FIVPITVVSFCYLRIWVLVIQ-------VRRKVKSESKPRLKPSDFRNFLTMFVVF 217
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 249 GSFVLCFSPYVVTRQLVELIPSV---HIPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRK 305
Cdd:cd15400 218 VIFAICWAPLNLIGLAVAINPQEmapKVPEWLFVVSYFMAYFNSCLNAIIYGLLNQNFRK 277
7tmA_Bombesin_R-like cd15927
bombesin receptor subfamily, member of the class A family of seven-transmembrane G ...
14-140 1.74e-06

bombesin receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; This bombesin subfamily of G-protein coupled receptors consists of neuromedin B receptor (NMBR), gastrin-releasing peptide receptor (GRPR), and bombesin receptor subtype 3 (BRS-3). Bombesin is a tetradecapeptide, originally isolated from frog skin. Mammalian bombesin-related peptides are widely distributed in the gastrointestinal and central nervous systems. The bombesin family receptors couple mainly to the G proteins of G(q/11) family. NMBR functions as the receptor for the neuropeptide neuromedin B, a potent mitogen and growth factor for normal and cancerous lung and for gastrointestinal epithelial tissues. Gastrin-releasing peptide is an endogenous ligand for GRPR and shares high sequence homology with NMB in the C-terminal region. Both NMB and GRP possess bombesin-like biochemical properties. BRS-3 is classified as an orphan receptor and suggested to play a role in sperm cell division and maturation. BRS-3 interacts with known naturally-occurring bombesin-related peptides with low affinity; however, no endogenous high-affinity ligand to the receptor has been identified. The bombesin receptor family belongs to the seven transmembrane rhodopsin-like G-protein coupled receptors (class A GPCRs), which perceive extracellular signals and transduce them to guanine nucleotide-binding (G) proteins.


Pssm-ID: 320593 [Multi-domain]  Cd Length: 294  Bit Score: 48.80  E-value: 1.74e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  14 LVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTN 93
Cdd:cd15927   8 ALIFLVGVLGNGTLILIFLRNKSMRN-VPNIFILSLALGDLLLLLTCVPFTSTIYTLDSWPFGEFLCKLSEFLKDTSIGV 86
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 47220248  94 AMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSL 140
Cdd:cd15927  87 SVFTLTALSADRYFAIVNPMRKHRSQATRRTLVTAASIWIVSILLAI 133
7tmA_Mu_opioid_R cd15090
opioid receptor subtype mu, member of the class A family of seven-transmembrane G ...
18-305 1.90e-06

opioid receptor subtype mu, member of the class A family of seven-transmembrane G protein-coupled receptors; The mu-opioid receptor binds endogenous opioids such as beta-endorphin and endomorphin. The opioid receptor family is composed of four major subtypes: mu (MOP), delta (DOP), kappa (KOP) opioid receptors, and the nociceptin/orphanin FQ peptide receptor (NOP). They are distributed widely in the central nervous system and respond to classic alkaloid opiates, such as morphine and heroin, as well as to endogenous peptide ligands, which include dynorphins, enkephalins, endorphins, endomorphins, and nociceptin. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others.


Pssm-ID: 320218 [Multi-domain]  Cd Length: 279  Bit Score: 48.45  E-value: 1.90e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  18 VVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILlAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNAMLS 97
Cdd:cd15090  12 VVGLFGNFLVMYVIVRYTKMKT-ATNIYIFNLALADAL-ATSTLPFQSVNYLMGTWPFGNILCKIVISIDYYNMFTSIFT 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  98 MAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGYSHTYASCTVhledgsrLAPYAAFtalf 177
Cdd:cd15090  90 LCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQGSIDCTL-------TFSHPSW---- 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 178 hsssfllcllvLCFAYLKVLRVARSHCKRIDVITVQTLLLLVDIHpSVKERCLAQQKKRR-QRATKKICIFIGSFVLCFS 256
Cdd:cd15090 159 -----------YWENLLKICVFIFAFIMPVLIITVCYGLMILRLK-SVRMLSGSKEKDRNlRRITRMVLVVVAVFIVCWT 226
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|..
gi 47220248 257 P---YVVTRQLVELIPSVHIPRYWGVTTkCLTYAKTSTDAFVYCLLRQQYRK 305
Cdd:cd15090 227 PihiYVIIKALVTIPETTFQTVSWHFCI-ALGYTNSCLNPVLYAFLDENFKR 277
7tmA_5-HT2 cd15052
serotonin receptor subtype 2, member of the class A family of seven-transmembrane G ...
13-140 2.00e-06

serotonin receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320180 [Multi-domain]  Cd Length: 262  Bit Score: 48.46  E-value: 2.00e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  13 VLVTAVVSLLTNL-SVLLCYCQSSELRSH-VPGIFILNLSFSNILLAAINMPTTFLGVAENGK-PFGDPFCQAASFAETF 89
Cdd:cd15052   4 ALLLLLLVIATIGgNILVCLAISLEKRLQnVTNYFLMSLAIADLLVGLLVMPLSILTELFGGVwPLPLVLCLLWVTLDVL 83
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|.
gi 47220248  90 LTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSL 140
Cdd:cd15052  84 FCTASIMHLCTISLDRYMAIRYPLRTRRNKSRTTVFLKIAIVWLISIGISS 134
7tmA_mAChR_M1 cd17790
muscarinic acetylcholine receptor subtype M1, member of the class A family of ...
13-136 2.01e-06

muscarinic acetylcholine receptor subtype M1, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of mAChRs by agonist (acetylcholine) leads to a variety of biochemical and electrophysiological responses. M1 is the dominant mAChR subtype involved in learning and memory. It is linked to synaptic plasticity, neuronal excitability, and neuronal differentiation during early development. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341356 [Multi-domain]  Cd Length: 262  Bit Score: 48.43  E-value: 2.01e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  13 VLVTAVVSLLT---NLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAI--NMPTTFLGVAENGkpFGDPFCQAAsFAE 87
Cdd:cd17790   4 VITTGILSLVTvtgNLLVLISFKVNSELKT-VNNYFLLSLACADLIIGAFsmNLYTTYILMGHWA--LGTVACDLW-LAL 79
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|
gi 47220248  88 TFLTTNA-MLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSL 136
Cdd:cd17790  80 DYVASNAsVMNLLIISFDRYFSITRPLTYRAKRTPRRAAIMIGLAWLISF 129
7tmA_OR4Q3-like cd15935
olfactory receptor 4Q3 and related proteins, member of the class A family of ...
8-145 2.09e-06

olfactory receptor 4Q3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q3 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320601 [Multi-domain]  Cd Length: 268  Bit Score: 48.22  E-value: 2.09e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRSHVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAE 87
Cdd:cd15935   2 LLFVLVLACYAAILLGNLLIVVTVHADPHLLQSPMYFFLANLSLIDMTLGSVAVPKVLADLLTCGRTISFGGCMAQLFFL 81
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLM 145
Cdd:cd15935  82 HFLGGSEMLLLTLMAYDRYVAICHPLRYLAVMNRQLCIKLLAACWAGGFLHSATQAAL 139
7tmA_GnRHR_invertebrate cd15384
invertebrate gonadotropin-releasing hormone receptors, member of the class A family of ...
8-261 2.54e-06

invertebrate gonadotropin-releasing hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; GnRHR, also known as luteinizing hormone releasing hormone receptor (LHRHR), plays an central role in vertebrate reproductive function; its activation by binding to GnRH leads to the release of follicle stimulating hormone (FSH) and luteinizing hormone (LH) from the pituitary gland. GnRHR is expressed predominantly in the gonadotrope membrane of the anterior pituitary as well as found in numerous extrapituitary tissues including lymphocytes, breast, ovary, prostate, and cancer cell lines. There are at least two types of GnRH receptors, GnRHR1 and GnRHR2, which couple primarily to G proteins of the Gq/11 family. GnRHR is closely related to the adipokinetic hormone receptor (AKH), which binds to a lipid-mobilizing hormone that is involved in control of insect metabolism. They share a common ancestor and are members of the class A of the seven-transmembrane, G-protein coupled receptor (GPCR) superfamily.


Pssm-ID: 320506 [Multi-domain]  Cd Length: 293  Bit Score: 48.20  E-value: 2.54e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVL-VTAVVSLLTNLSVLLcycQSSELRSHVPGIF--ILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAAS 84
Cdd:cd15384   1 LLKIVVLaVMFVISFIGNLLTII---QIYRLRRSRRTIYslLLHLAIADLLVTFFCIPSEAIWAYTVAWLAGNTMCKLVK 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  85 FAETFLTTNAMLSMAALSVDRWIAVVFPLSySSKMRYRdALLMVAYSWLQSLGFSLTQLLM---NWGGYSHTYASCTVHl 161
Cdd:cd15384  78 YLQVFGLYLSTYITVLISLDRCVAILYPMK-RNQAPER-VRRMVTVAWILSPIFSIPQAVIfhvERGPFVEDFHQCVTY- 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 162 edGSRLAP-----YAAFTALFhssSFLLCLLVLCFAYLKVLRVARSHCKRIdvitvQTLLLLVDIHPSVKERCLAQQKKR 236
Cdd:cd15384 155 --GFYTAEwqeqlYNMLSLVF---MFPIPLVIMVTCYVLIFITLSKSSRDF-----QGLEIYTRNRGPNRQRLFHKAKVK 224
                       250       260
                ....*....|....*....|....*
gi 47220248 237 RQRATKKIcifIGSFVLCFSPYVVT 261
Cdd:cd15384 225 SLRMSAVI---VTAFILCWTPYYVI 246
7tmA_GPR63 cd15404
G protein-coupled receptor 63, member of the class A family of seven-transmembrane G ...
8-140 2.59e-06

G protein-coupled receptor 63, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes the human orphan receptor GPR63, which is also called PSP24-beta or PSP24-2, and its closely related proteins found in vertebrates. GPR63 shares the highest sequence homology with GPR45 (Xenopus PSP24, mammalian PSP24-alpha or PSP24-1). PSP24 was originally identified as a novel, high-affinity lysophosphatidic acid (LPA) receptor in Xenopus laevis oocytes; however, PSP24 receptors (GPR45 and GPR63) have not been shown to be activated by LPA. Mammalian PSP24 receptors are highly expressed in neuronal cells of cerebellum and their expression level remains constant from the early embryonic stages to adulthood, suggesting the important role of PSP24s in brain neuronal functions. Members of this subgroup contain the highly conserved Asp-Arg-Tyr/Phe (DRY/F) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors which is important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320526 [Multi-domain]  Cd Length: 265  Bit Score: 47.91  E-value: 2.59e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRSHVpGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAE 87
Cdd:cd15404   2 ILSAVMIFILLVSFLGNFVVCLMVYQKAAMRSAI-NILLASLAFADMMLAVLNMPFALVTIITTRWIFGDAFCRVSAMFF 80
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|...
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVfplSYSSKMRYRDALLMVAYSWLQSLGFSL 140
Cdd:cd15404  81 WLFVMEGVAILLIISIDRFLIIV---QKQDKLNPYRAKVLIAVSWAVSFCVAF 130
7tmA_SREB-like cd15005
super conserved receptor expressed in brain and related proteins, member of the class A family ...
19-140 2.76e-06

super conserved receptor expressed in brain and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; The SREB (super conserved receptor expressed in brain) subfamily consists of at least three members, named SREB1 (GPR27), SREB2 (GPR85), and SREB3 (GPR173). They are very highly conserved G protein-coupled receptors throughout vertebrate evolution, however no endogenous ligands have yet been identified. SREB2 is greatly expressed in brain regions involved in psychiatric disorders and cognition, such as the hippocampal dentate gyrus. Genetic studies in both humans and mice have shown that SREB2 influences brain size and negatively regulates hippocampal adult neurogenesis and neurogenesis-dependent cognitive function, all of which are suggesting a potential link between SREB2 and schizophrenia. All three SREB genes are highly expressed in differentiated hippocampal neural stem cells. Furthermore, all GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320134 [Multi-domain]  Cd Length: 329  Bit Score: 48.22  E-value: 2.76e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  19 VSLLTNLSVLLCYCQSSELRsHVPGIFILNLSFSNILLAAINMPTTFLGVAEN-GKPFGDPFCQAASFAETFLTTNAMLS 97
Cdd:cd15005  13 VSLAGNLLFSVLIVRDRSLH-RAPYYFLLDLCLADGLRSLACFPFVMASVRHGsGWIYGALSCKVIAFLAVLFCFHSAFT 91
                        90       100       110       120
                ....*....|....*....|....*....|....*....|...
gi 47220248  98 MAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSL 140
Cdd:cd15005  92 LFCIAVTRYMAIAHHRFYAKRMTFWTCLAVICMAWTLSVAMAF 134
7tmA_Mel1 cd15209
melatonin receptor 1, member of the class A family of seven-transmembrane G protein-coupled ...
12-305 2.93e-06

melatonin receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Melatonin (N-acetyl-5-methoxytryptamine) is a naturally occurring sleep-promoting chemical found in vertebrates, invertebrates, bacteria, fungi, and plants. In mammals, melatonin is secreted by the pineal gland and is involved in regulation of circadian rhythms. Its production peaks during the nighttime, and is suppressed by light. Melatonin is shown to be synthesized in other organs and cells of many vertebrates, including the Harderian gland, leukocytes, skin, and the gastrointestinal (GI) tract, which contains several hundred times more melatonin than the pineal gland and is involved in the regulation of GI motility, inflammation, and sensation. Melatonin exerts its pleiotropic physiological effects through specific membrane receptors, named MT1A, MT1B, and MT1C, which belong to the class A rhodopsin-like G-protein coupled receptor family. MT1A and MT1B subtypes are present in mammals, whereas MT1C subtype has been found in amphibians and birds. The melatonin receptors couple to G proteins of the G(i/o) class, leading to the inhibition of adenylate cyclase.


Pssm-ID: 320337 [Multi-domain]  Cd Length: 279  Bit Score: 47.85  E-value: 2.93e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  12 CVLV-TAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFL 90
Cdd:cd15209   5 CVLIvTIVVDVLGNLLVILSVLRNKKLRN-AGNIFVVSLSVADLVVAIYPYPLILHAIFHNGWTLGQLHCQASGFIMGLS 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  91 TTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGYSHTYASCTVHLEDGSRlapY 170
Cdd:cd15209  84 VIGSIFNITAIAINRYCYICHSLQYDRLYSLRNTCCYLCLTWLLTVLAVLPNFFIGSLQYDPRIYSCTFAQTVSTV---Y 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 171 AAFTALFHSSsfllcllvlcfayLKVLRVarSHCkridviTVQTLLLLVDIHPSVKERCLAQQKKRRQRATKKICIFIGS 250
Cdd:cd15209 161 TITVVVIHFL-------------LPLLIV--SFC------YLRIWVLVLQVRQRVKPDQRPKLKPADVRNFLTMFVVFVL 219
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 47220248 251 FVLCFSPYVVTRQLVELIPSV---HIPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRK 305
Cdd:cd15209 220 FAVCWAPLNFIGLAVAINPKEmapKIPEWLFVASYFMAYFNSCLNAIIYGLLNQNFRK 277
7tmA_GPR45 cd15403
G protein-coupled receptor 45, member of the class A family of seven-transmembrane G ...
8-140 2.95e-06

G protein-coupled receptor 45, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes the human orphan receptor GPR45 and closely related proteins found in vertebrates. GPR45 is also called PSP24 in Xenopus and PSP24-alpha (or PSP24-1) in mammals. GPR45 shows the highest sequence homology with GPR63 (PSP24-beta, or PSP24-2). PSP24 was originally identified as a novel, high-affinity lysophosphatidic acid (LPA) receptor in Xenopus laevis oocytes; however, PSP24 receptors (GPR45 and GPR63) have not been shown to be activated by LPA. Mammalian PSP24 receptors are highly expressed in neuronal cells of cerebellum and their expression level remains constant from the early embryonic stages to adulthood, suggesting the important role of PSP24s in brain neuronal functions. Members of this subgroup contain the highly conserved Asp-Arg-Tyr/Phe (DRY/F) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors which is important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320525 [Multi-domain]  Cd Length: 301  Bit Score: 47.92  E-value: 2.95e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRSHVpGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAE 87
Cdd:cd15403   2 LLAIVMILMIAIGFLGNAIVCLIVYQKPAMRSAI-NLLLATLAFSDIMLSLLCMPFTAVTIITVDWHFGAHFCRISAMLY 80
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|...
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVfplSYSSKMRYRDALLMVAYSWLQSLGFSL 140
Cdd:cd15403  81 WFFVLEGVAILLIISVDRFLIIV---QRQDKLNPHRAKVMIAISWVLSFCISF 130
7tmA_OR5J-like cd15415
olfactory receptor subfamily 5J and related proteins, member of the class A family of ...
4-142 3.07e-06

olfactory receptor subfamily 5J and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5J and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320537 [Multi-domain]  Cd Length: 279  Bit Score: 47.79  E-value: 3.07e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   4 IPEFLLevcVLVTAVVSLLTNLSVLLCYCQSSELrsHVPGIFIL-NLSFSNILLAAINMPTTFLGVAENGK--PFGDPFC 80
Cdd:cd15415   1 VPLFML---FLLIYFITLLGNLGMIVLIRINPQL--HTPMYFFLsNLSFVDLCYSSVFAPRLLVNFLVEKKtiSYSACIA 75
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47220248  81 QAASFAeTFLTTNAMLsMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQ 142
Cdd:cd15415  76 QHFFFA-VFVTTEGFL-LAVMAYDRYVAICNPLLYTVAMTKRVCVQLVAGSYLGGLINSLTH 135
7tmA_ETH-R cd14997
ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G ...
11-145 3.70e-06

ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the ecdysis-triggering hormone receptors found in insects, which are members of the class A family of seven-transmembrane G-protein coupled receptors. Ecdysis-triggering hormones are vital regulatory signals that govern the stereotypic physiological sequence leading to cuticle shedding in insects. Thus, the ETH signaling system has been a target for the design of more sophisticated insect-selective pest control strategies. Two subtypes of ecdysis-triggering hormone receptor were identified in Drosophila melanogaster. Blood-borne ecdysis-triggering hormone (ETH) activates the behavioral sequence through direct actions on the central nervous system. In insects, ecdysis is thought to be controlled by the interaction between peptide hormones; in particular between ecdysis-triggering hormone (ETH) from the periphery and eclosion hormone (EH) and crustacean cardioactive peptide (CCAP) from the central nervous system. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320128 [Multi-domain]  Cd Length: 294  Bit Score: 47.67  E-value: 3.70e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  11 VCVLVTaVVSLLTNLSVLLCYCQSSELRSHVpGIFILNLSFSNILLAAINMPTTFLGVAEnGKP--FGDPFCQAASFAET 88
Cdd:cd14997   6 VYGVIF-VVGVLGNVLVGIVVWKNKDMRTPT-NIFLVNLSVADLLVLLVCMPVALVETWA-REPwlLGEFMCKLVPFVEL 82
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 47220248  89 FLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLM 145
Cdd:cd14997  83 TVAHASVLTILAISFERYYAICHPLQAKYVCTKRRALVIIALIWLLALLTSSPVLFI 139
7tmA_Parietopsin cd15085
non-visual parietopsins, member of the class A family of seven-transmembrane G protein-coupled ...
8-304 3.80e-06

non-visual parietopsins, member of the class A family of seven-transmembrane G protein-coupled receptors; Parietopsin is a non-visual green light-sensitive opsin that was initially identified in the parietal eye of lizards. The vertebrate non-visual opsin family includes pinopsins, parapinopsin, VA (vertebrate ancient) opsins, and parietopsins. These non-visual opsins are expressed in various extra-retinal tissues and/or in non-rod, non-cone retinal cells. They are thought to be involved in light-dependent physiological functions such as photo-entrainment of circadian rhythm, photoperiodicity and body color change. Parietopsin belongs to the class A of the G protein-coupled receptors and shows strong homology to the vertebrate visual opsins.


Pssm-ID: 320213 [Multi-domain]  Cd Length: 280  Bit Score: 47.54  E-value: 3.80e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRSHVpGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAE 87
Cdd:cd15085   2 ILSFLMFLNATFSIFNNVLVIAVTLKNPQLRNPI-NIFILNLSFSDLMMALCGTTIVTVTNYEGYFYLGDAFCIFQGFAV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVFPLSySSKMRYRDALLMVAYSWLQSLGFSLTQLLmNWGGY--SHTYASCTVHLEDgs 165
Cdd:cd15085  81 NYFGIVSLWSLTLLAYERYNVVCKPMG-GLKLSTKRGYQGLLFIWLFCLFWAVAPLF-GWSSYgpEGVQTSCSIGWEE-- 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 166 RLAPYAAFTALFHSSSFLLCLLVLCFAYLKVLRVARSHCKRIDVITVQTllllvdihpsvkerclaqQKKRRQRATKKIC 245
Cdd:cd15085 157 RSWSNYSYLILYFLMCFVIPVAIIGFSYGNVLRSLHKLNKKIEQQGGKN------------------CPEEEERAVIMVL 218
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 47220248 246 IFIGSFVLCFSPYVVTRQLVELIPSVHIPRYwgVTTKCLTYAKTST--DAFVYCLLRQQYR 304
Cdd:cd15085 219 AMVIAFLICWLPYTVFALIVVVNPELSISPL--AATMPTYFAKTSPvyNPIIYIFLNKQFR 277
7tmA_MCHR2 cd15339
melanin concentrating hormone receptor 2, member of the class A family of seven-transmembrane ...
38-307 4.00e-06

melanin concentrating hormone receptor 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Melanin-concentrating hormone receptor (MCHR) binds melanin concentrating hormone and is presumably involved in the neuronal regulation of food intake and energy homeostasis. Despite strong homology with somatostatin receptors, MCHR does not appear to bind somatostatin. Two MCHRs have been characterized in vertebrates, MCHR1 and MCHR2. MCHR1 is expressed in all mammals, whereas MCHR2 is only expressed in the higher order mammals, such as humans, primates, and dogs, and is not found in rodents. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320461 [Multi-domain]  Cd Length: 283  Bit Score: 47.50  E-value: 4.00e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  38 RSHVPGIFILNLSFSNiLLAAINMPTTFLGVAENGK-PFGDPFCQAASFAETFLTTNAMLSMAALSVDRWIAVVFPLSYS 116
Cdd:cd15339  30 KKTVPDIYVCNLAVAD-LVHIIVMPFLIHQWARGGEwVFGSPLCTIITSLDTCNQFACSAIMTAMSLDRYIALVHPFRLT 108
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 117 SKMRYRDALLMVAYSWLQSlgFSLTQLLMNWG---GYSHTYASCTVHL---EDGSRLAPYAAFTALFHSSSFLLCLLVLC 190
Cdd:cd15339 109 SLRTRSKTIRINLLVWAAS--FILVLPVWVYAkviKFRDGLESCAFNLtspDDVLWYTLYQTITTFFFPLPLILICYILI 186
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 191 FAYlkVLRVARSHCKRIDVITvqtllllvdihpsvkerclAQQKKRRQRATKKICIFIGSFVLCFSPYVVTrQLVELipS 270
Cdd:cd15339 187 LCY--TWEMYRKNKKAGRYNT-------------------SIPRQRVMRLTKMVLVLVGVFLVSAAPYHVI-QLVNL--S 242
                       250       260       270       280
                ....*....|....*....|....*....|....*....|.
gi 47220248 271 VHIPRYWGVT----TKCLTYAKTSTDAFVYCLLRQQYRKVL 307
Cdd:cd15339 243 VSQPTLAFYVsyylSICLSYASSSINPFLYILLSGNFRKRL 283
7tmA_5-HT2A cd15304
serotonin receptor subtype 2A, member of the class A family of seven-transmembrane G ...
13-304 4.69e-06

serotonin receptor subtype 2A, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341345 [Multi-domain]  Cd Length: 267  Bit Score: 47.23  E-value: 4.69e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  13 VLVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAEN-GKPFGDPFCQAASFAETFLT 91
Cdd:cd15304   7 TVIVIILTIAGNILVIMAVSLEKKLQN-ATNYFLMSLAIADMLLGFLVMPVSMLTILYGyRWPLPSKLCAVWIYLDVLFS 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  92 TNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGYSHTYASCTVHLEDgSRLAPYA 171
Cdd:cd15304  86 TASIMHLCAISLDRYIAIRNPIHHSRFNSRTKAFLKIIAVWTISVGISMPIPVFGLQDDSKVFKEGSCLLAD-ENFVLIG 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 172 AFTALFHSSsfllcllvlcfaylkvlrvarshckridVITVQTLLLLVdihpsvkeRCLAQQKKRRQRATKKICIFIGSF 251
Cdd:cd15304 165 SFVAFFIPL----------------------------TIMVITYFLTI--------KSLQQSISNEQKASKVLGIVFFLF 208
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 47220248 252 VLCFSPYVVTRQLVELIPSVHIPRYWGVTTKCLT---YAKTSTDAFVYCLLRQQYR 304
Cdd:cd15304 209 VVMWCPFFITNVMAVICKESCNEVVIGGLLNVFVwigYLSSAVNPLVYTLFNKTYR 264
7tmA_GPRnna14-like cd15001
GPRnna14 and related proteins, member of the class A family of seven-transmembrane G ...
14-139 7.13e-06

GPRnna14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the orphan G-protein coupled receptor GPRnna14 found in body louse (Pediculus humanus humanus) as well as its closely related proteins of unknown function. These receptors are members of the class A rhodopsin-like G-protein coupled receptors. As an obligatory parasite of humans, the body louse is an important vector for human diseases, including epidemic typhus, relapsing fever, and trench fever. GPRnna14 shares significant sequence similarity with the members of the neurotensin receptor family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320132 [Multi-domain]  Cd Length: 266  Bit Score: 46.50  E-value: 7.13e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  14 LVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTN 93
Cdd:cd15001   7 VITFVLGLIGNSLVIFVVARFRRMRS-VTNVFLASLATADLLLLVFCVPLKTAEYFSPTWSLGAFLCKAVAYLQLLSFIC 85
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
gi 47220248  94 AMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFS 139
Cdd:cd15001  86 SVLTLTAISIERYYVILHPMKAKSFCTIGRARKVALLIWILSAILA 131
7tmA_QRFPR cd15205
pyroglutamylated RFamide peptide receptor, member of the class A family of seven-transmembrane ...
8-138 7.16e-06

pyroglutamylated RFamide peptide receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; 26RFa, also known as QRFP (Pyroglutamylated RFamide peptide), is a 26-amino acid residue peptide that belongs to a family of neuropeptides containing an Arg-Phe-NH2 (RFamide) motif at its C-terminus. 26Rfa/QRFP exerts similar orexigenic activity including the regulation of feeding behavior in mammals. It is the ligand for G-protein coupled receptor 103 (GPR103), which is predominantly expressed in paraventricular (PVN) and ventromedial (VMH) nuclei of the hypothalamus. GPR103 shares significant protein sequence homology with orexin receptors (OX1R and OX2R), which have recently shown to produce a neuroprotective effect in Alzheimer's disease by forming a functional heterodimer with GPR103.


Pssm-ID: 320333 [Multi-domain]  Cd Length: 298  Bit Score: 46.70  E-value: 7.16e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAE 87
Cdd:cd15205   2 AFVITYVLIFVLALFGNSLVIYVVTRKRAMRT-ATNIFICSLALSDLLITFFCIPFTLLQNISSNWLGGAFMCKMVPFVQ 80
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVFPLsyssKMRY----RDALLMVAYSWLQSLGF 138
Cdd:cd15205  81 STAVVTSILTMTCIAVERHQGIVHPL----KMKWqytnRRAFTMLGLVWIVSVIV 131
7tmA_TAAR6_8_9 cd15316
trace amine-associated receptors 6, 8, and 9, member of the class A family of ...
17-307 7.74e-06

trace amine-associated receptors 6, 8, and 9, member of the class A family of seven-transmembrane G protein-coupled receptors; Included in this group are mammalian TAAR6, TAAR8, TAAR9, and similar proteins. They are among the 15 identified amine-associated receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320439 [Multi-domain]  Cd Length: 290  Bit Score: 46.78  E-value: 7.74e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  17 AVVSLLTNLSVLLCYCQSSELrsHVPGIF-ILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNAM 95
Cdd:cd15316  11 AVLAVFGNLLVMISILHFKQL--HSPTNFlIASLACADFLVGVTVMPFSTVRSVESCWYFGESFCTFHTCCDVSFCYASL 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  96 LSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMnwGGYSHTYASCTVHLE-DGSRLAPYAAFT 174
Cdd:cd15316  89 FHLCFISVDRYIAVTDPLVYPTKFTVSVSGICISVSWIFSLTYSFSVFYT--GVNDDGLEELVNALNcVGGCQIILNQNW 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 175 ALFHSSSFLLCLLVLCFAYLKVLRVARSHCKRIDVITVQTllllvdihPSVKERCLAQQKKRRQRATKKICIFIGSFVLC 254
Cdd:cd15316 167 VLVDFLLFFIPTFAMIILYGKIFLVAKQQARKIEMTSSKA--------ESSSESYKDRVARRERKAAKTLGITVIAFLVS 238
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|...
gi 47220248 255 FSPYVVTRQLVELIPSVHIPRYWGVTTKClTYAKTSTDAFVYCLLRQQYRKVL 307
Cdd:cd15316 239 WLPYLIDVLIDAFMNFITPPYIYEICCWC-AYYNSAMNPLIYALFYPWFRKAI 290
7tmA_Angiotensin_R-like cd14985
angiotesin receptor family and its related G protein-coupled receptors, member of the class A ...
4-144 8.36e-06

angiotesin receptor family and its related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the angiotensin receptors, the bradykinin receptors, apelin receptor as well as putative G-protein coupled receptors (GPR15 and GPR25). Angiotensin II (Ang II), the main effector in the renin-angiotensin system, plays a crucial role in the regulation of cardiovascular homeostasis through its type 1 (AT1) and type 2 (AT2) receptors. Ang II contributes to cardiovascular diseases such as hypertension and atherosclerosis via AT1R activation. Ang II increases blood pressure through Gq-mediated activation of phospholipase C, resulting in phosphoinositide (PI) hydrolysis and increased intracellular calcium levels. Through the AT2 receptor, Ang II counteracts the vasoconstrictor action of AT1R and thereby induces vasodilation, sodium excretion, and reduction of blood pressure. Bradykinins (BK) are pro-inflammatory peptides that mediate various vascular and pain responses to tissue injury through its B1 and B2 receptors. Apelin (APJ) receptor binds the endogenous peptide ligands, apelin and Toddler/Elabela. APJ is an adipocyte-derived hormone that is ubiquitously expressed throughout the human body, and Toddler/Elabela is a short secretory peptide that is required for normal cardiac development in zebrafish. Activation of APJ receptor plays key roles in diverse physiological processes including vasoconstriction and vasodilation, cardiac muscle contractility, angiogenesis, and regulation of water balance and food intake. Orphan receptors, GPR15 and GPR25, share strong sequence homology to the angiotensin II type AT1 and AT2 receptors.


Pssm-ID: 341320 [Multi-domain]  Cd Length: 284  Bit Score: 46.60  E-value: 8.36e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   4 IPEFLLEVCVlvtavVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAiNMPTTFLGVAENGK-PFGDPFCQA 82
Cdd:cd14985   3 IPALYIAIFL-----VGLLGNLFVVWVFLFPRGPKR-VADIFIANLAAADLVFVL-TLPLWATYTANQYDwPFGAFLCKV 75
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47220248  83 ASFAETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLL 144
Cdd:cd14985  76 SSYVISVNMFASIFLLTCMSVDRYLAIVHPVASRRLRRRRQARVTCALIWVVACLLSLPTFL 137
7tmA_D4_dopamine_R cd15308
D4 dopamine receptor of the D2-like family, member of the class A family of ...
7-137 8.58e-06

D4 dopamine receptor of the D2-like family, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. Activation of D2-like family receptors is linked to G proteins of the G(i) family. This leads to a decrease in adenylate cyclase activity, thereby decreasing cAMP levels. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320434 [Multi-domain]  Cd Length: 258  Bit Score: 46.37  E-value: 8.58e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   7 FLLEVCVLVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMP----TTFLGVAENGKPFgdpFCQA 82
Cdd:cd15308   1 AAALVGGVLLILAIIAGNVLVCLSVCTERALKT-TTNYFIVSLAVADLLLALLVLPlyvySEFQGGVWTLSPV---LCDA 76
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*
gi 47220248  83 ASFAETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLG 137
Cdd:cd15308  77 LMTMDVMLCTASIFNLCAISVDRFIAVSVPLNYNRRQGSVRQLLLISATWILSFA 131
7tmA_NPFFR1 cd15981
neuropeptide FF receptor 1, member of the class A family of seven-transmembrane G ...
38-136 9.57e-06

neuropeptide FF receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropeptide FF (NPFF) is a mammalian octapeptide that belongs to a family of neuropeptides containing an RF-amide motif at their C-terminus that have been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of these peptides are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R. NPFF has been shown to inhibit adenylate cyclase via the Gi protein coupled to NPFF1-R.


Pssm-ID: 320647 [Multi-domain]  Cd Length: 299  Bit Score: 46.36  E-value: 9.57e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  38 RSHVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNAMLSMAALSVDRWIAVVFPlsYSS 117
Cdd:cd15981  31 MRTVTNMFILNLAVSDLLVGIFCMPTTLVDNLITGWPFDNAMCKMSGLVQGMSVSASVFTLVAIAVERFRCIVHP--FRQ 108
                        90
                ....*....|....*....
gi 47220248 118 KMRYRDALLMVAYSWLQSL 136
Cdd:cd15981 109 KLTLRKAIVTIVIIWVLAL 127
7tmA_OR cd13954
olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled ...
7-145 9.79e-06

olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320092 [Multi-domain]  Cd Length: 270  Bit Score: 46.32  E-value: 9.79e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   7 FLLEVCVLVTAVVSLLTNLSVLLCYCQSSELrsHVPG-IFILNLSFSNILLAAINMPTTFLGVAENGK--PFGDPFCQAA 83
Cdd:cd13954   1 ILLFVLFLLIYLLTLLGNLLIILLVRLDSRL--HTPMyFFLSNLSFLDICYTSVTVPKMLANLLSGDKtiSFSGCLTQLY 78
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47220248  84 SFaeTFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLM 145
Cdd:cd13954  79 FF--FSLGGTECFLLAVMAYDRYVAICHPLHYPTIMNKRVCILLAAGSWLIGFLNSLIHTVL 138
7tmA_Gal2_Gal3_R cd15097
galanin receptor subtypes 2 and 3, member of the class A family of seven-transmembrane G ...
25-305 9.85e-06

galanin receptor subtypes 2 and 3, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Three receptors subtypes have been so far identified: GAL1, GAL2, and GAL3. The specific functions of each subtype remains mostly unknown, although galanin is thought to be involved in a variety of neuronal functions such as hormone release and food intake. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, depression, eating disorders, epilepsy and stroke, among many others.


Pssm-ID: 320225 [Multi-domain]  Cd Length: 279  Bit Score: 46.36  E-value: 9.85e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  25 LSVLLcycQSSELRSHVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAeTFLTTNAM-LSMAALSV 103
Cdd:cd15097  22 LAVLL---RSGQSGHNTTNLFILNLSVADLCFILFCVPFQATIYSLEGWVFGSFLCKAVHFF-IYLTMYASsFTLAAVSV 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 104 DRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQL----LMNWGGYShtyaSCTVHLEDGSRLAPYAAFTALFHS 179
Cdd:cd15097  98 DRYLAIRYPLRSRELRTPRNAVAAIALIWGLSLLFAGPYLsyydLIDYANST----VCMPGWEEARRKAMDTCTFAFGYL 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 180 ssfllcllvlcfayLKVLRVARSHCKridviTVQTLLLLVDIHPSVKERclaqqKKRRQRATKKICIFIGSFVLCFSPY- 258
Cdd:cd15097 174 --------------IPVLVVSLSYTR-----TIKYLWTAVDPLEAMSES-----KRAKRKVTKMIIIVTALFCLCWLPHh 229
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*...
gi 47220248 259 -VVTRQLVELIPSVHIPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRK 305
Cdd:cd15097 230 vVILCYLYGDFPFNQATYAFRLLSHCMAYANSCLNPIVYALVSKHFRK 277
7tmA_OR6B-like cd15224
olfactory receptor subfamily 6B and related proteins, member of the class A family of ...
8-145 1.20e-05

olfactory receptor subfamily 6B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6B, 6A, 6Y, 6P, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320352  Cd Length: 270  Bit Score: 46.12  E-value: 1.20e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELrsHVPGIFIL-NLSFSNILLAAINMPTTFLG--VAENGKPFGDPFCQAAS 84
Cdd:cd15224   2 LLFLLFLIAYVLTLLENLLIILTIWLNSQL--HKPMYFFLsNLSFLEIWYISVTVPKLLAGflSQNKSISFVGCMTQLYF 79
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 47220248  85 FAeTFLTTNAMLsMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLM 145
Cdd:cd15224  80 FL-SLACTECVL-LAVMAYDRYVAICHPLRYPVIMTHQLCVQLAAGSWLSGFLISMIKVYF 138
7tmA_OR6C-like cd15912
olfactory receptor subfamily 6C and related proteins, member of the class A family of ...
7-145 1.30e-05

olfactory receptor subfamily 6C and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6C, 6X, 6J, 6T, 6V, 6M, 9A, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320578  Cd Length: 270  Bit Score: 45.94  E-value: 1.30e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   7 FLLEVCVLVTAVVSLLTNLSVLLCYCQSSELrsHVPGIFIL-NLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASF 85
Cdd:cd15912   1 ILLFLLLLLTYLLTLLGNLLIITITLVDHRL--HTPMYFFLrNFSFLEILFTSVVIPKMLANLLSGKKTISFAGCFAQSF 78
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  86 AETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLM 145
Cdd:cd15912  79 FYFFLGTTEFFLLAVMSFDRYVAICNPLHYPTIMNSRVCLQLVLGSWVGGFLLILPPTIL 138
7tmA_OR5P-like cd15416
olfactory receptor subfamily 5P and related proteins, member of the class A family of ...
14-135 1.50e-05

olfactory receptor subfamily 5P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5P and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320538 [Multi-domain]  Cd Length: 279  Bit Score: 45.82  E-value: 1.50e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  14 LVTAVVSLLTNLSVLLCYCQSSELrsHVPGIFIL-NLSFSNILL---AAINMPTTFLgVAENGKPFgdPFCQAASFAETF 89
Cdd:cd15416   8 LVIYSVTLLGNLSIILLIRISSQL--HTPMYFFLsHLAFSDICYsssVTPKMLVNFL-VEKTTISY--PGCAAQLCSAAT 82
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
gi 47220248  90 LTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQS 135
Cdd:cd15416  83 FGTVECFLLAAMAYDRYVAICNPLLYSTIMSQKVCVLLVAASYLGG 128
7tmA_5-HT1F cd15334
serotonin receptor subtype 1F, member of the class A family of seven-transmembrane G ...
8-305 1.63e-05

serotonin receptor subtype 1F, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT1 receptors, one of 14 mammalian 5-HT receptors, is a member of the class A of GPCRs and is activated by the endogenous neurotransmitter and peripheral signal mediator serotonin (5-hydroxytryptamine, 5-HT). The 5-HT1 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. The 5-HT1 receptor subfamily includes 5 subtypes: 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as the 5-HT2C receptor. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320456 [Multi-domain]  Cd Length: 259  Bit Score: 45.71  E-value: 1.63e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRsHVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAE 87
Cdd:cd15334   2 LISLTLSILALMTTAINSLVITAIIVTRKLH-HPANYLICSLAVTDFLVAVLVMPFSIMYIVKETWIMGQVVCDIWLSVD 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLmnWGGYSHTYASCTVHLEDGSRL 167
Cdd:cd15334  81 ITCCTCSILHLSAIALDRYRAITDAVEYARKRTPKHAGIMIAVVWIISIFISMPPLF--WRHQTTSREDECIIKHDHIVF 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 168 APYAAFTALFhsssflLCLLVLCFAYLKVLRVArshckridvitvqtllllvdihpsvkerclaqqkKRRQRATKKICIF 247
Cdd:cd15334 159 TIYSTFGAFY------IPLALILILYYKIYRAA----------------------------------TRERKAATTLGLI 198
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 47220248 248 IGSFVLCFSPYVVTRQLVELIPSVHIPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRK 305
Cdd:cd15334 199 LGAFVICWLPFFVKEVIVNTCDSCYISEEMSNFLTWLGYINSLINPLIYTIFNEDFKK 256
7tmA_OR2B2-like cd15432
olfactory receptor subfamily 2B2 and related proteins, member of the class A family of ...
8-142 1.91e-05

olfactory receptor subfamily 2B2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 2B2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320549 [Multi-domain]  Cd Length: 277  Bit Score: 45.55  E-value: 1.91e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELrsHVPGIFIL-NLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFA 86
Cdd:cd15432   2 VLFVVFLIFYILTLLGNLAIILVSRLDPQL--HTPMYFFLsNLSLLDLCYTTSTVPQMLVNLRSPQKTISYGGCVAQLFI 79
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 47220248  87 ETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQ 142
Cdd:cd15432  80 FLGLGSTECVLLAVMAFDRFAAICQPLHYSVIMHQRLCQQLAAGAWISGFANSLVQ 135
7tmA_Beta2_AR cd15957
beta-2 adrenergic receptors (adrenoceptors), member of the class A family of ...
41-297 2.17e-05

beta-2 adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; Beta-2 AR is activated by adrenaline that plays important roles in cardiac function and pulmonary physiology. While beta-1 AR and beta-2 AR are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway, beta-2 AR can couple to both G(s) and G(i) proteins in the heart. Moreover, beta-2 AR activation leads to smooth muscle relaxation and bronchodilation in the lung. The beta adrenergic receptors are a subfamily of the class A rhodopsin-like G protein-coupled receptors.


Pssm-ID: 341355 [Multi-domain]  Cd Length: 301  Bit Score: 45.24  E-value: 2.17e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  41 VPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMR 120
Cdd:cd15957  34 VTNYFITSLACADLVMGLAVVPFGAAHILLKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLT 113
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 121 YRDALLMVAYSWLQSLGFSLTQLLMNWGGYSHTYASCTVHLEDGSRLAPYAAFTALFHSSSFLLCLLVLCFAYLKVLRVA 200
Cdd:cd15957 114 KNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEA 193
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 201 RSHCKRIDVITVQTLLLLVDIHPSVKERCLAQQKK---RRQRATKKICIFIGSFVLCFSPYVVTrQLVELIPSVHIPRYW 277
Cdd:cd15957 194 KRQLQKIDKSEGRFHNQNIDQNGSGGGGGNRRRSKfclKEHKALKTLGIIMGTFTLCWLPFFIV-NIVHVIQDNLIRKEV 272
                       250       260
                ....*....|....*....|
gi 47220248 278 GVTTKCLTYAKTSTDAFVYC 297
Cdd:cd15957 273 YILLNWIGYVNSGFNPLIYC 292
7tmA_OR4-like cd15226
olfactory receptor family 4 and related proteins, member of the class A family of ...
8-144 2.19e-05

olfactory receptor family 4 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 4 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320354 [Multi-domain]  Cd Length: 267  Bit Score: 45.27  E-value: 2.19e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELrsHVPGIFIL-NLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFA 86
Cdd:cd15226   2 FLFVFFSLFYVATVLGNLLIVVTVTSDPHL--HSPMYFLLaNLSFIDLCLSSFATPKMICDLLREHKTISFGGCMAQIFF 79
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 47220248  87 ETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLL 144
Cdd:cd15226  80 LHFFGGSEMVLLIAMAFDRYVAICKPLHYLTIMSPRMCILLVVASWIIGFIHSLSQLA 137
7tmA_CCK_R cd15206
cholecystokinin receptors, member of the class A family of seven-transmembrane G ...
11-137 2.53e-05

cholecystokinin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320334 [Multi-domain]  Cd Length: 269  Bit Score: 45.07  E-value: 2.53e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  11 VCVLVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFL 90
Cdd:cd15206   5 PLYSVIFLLAVVGNILVIVTLVQNKRMRT-VTNVFLLNLAVSDLLLAVFCMPFTLVGQLLRNFIFGEVMCKLIPYFQAVS 83
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 47220248  91 TTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLG 137
Cdd:cd15206  84 VSVSTFTLVAISLERYFAICHPLKSRVWQTLSHAYKVIAGIWLLSFL 130
7tmA_NTSR cd15130
neurotensin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
35-307 2.71e-05

neurotensin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Neurotensin (NTS) is a 13 amino-acid neuropeptide that functions as both a neurotransmitter and a hormone in the nervous system and peripheral tissues, respectively. NTS exerts various biological activities through activation of the G protein-coupled neurotensin receptors, NTSR1 and NTSR2. In the brain, NTS is involved in the modulation of dopamine neurotransmission, opioid-independent analgesia, hypothermia, and the inhibition of food intake, while in the periphery NTS promotes the growth of various normal and cancer cells and acts as a paracrine and endocrine modulator of the digestive tract. The third neurotensin receptor, NTSR3 or also called sortilin, is not a G protein-coupled receptor.


Pssm-ID: 320258 [Multi-domain]  Cd Length: 281  Bit Score: 44.94  E-value: 2.71e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  35 SELRSHVpgifiLNLSFSNILLAAINMPTTFLGVAENGKP--FGDPFCQAASFAETFLTTNAMLSMAALSVDRWIAVVFP 112
Cdd:cd15130  36 STVRYHL-----GSLALSDLLILLLAMPVELYNFIWVHHPwaFGDAGCRGYYFLRDACTYATALNVASLSVERYLAICHP 110
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 113 LSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNwgGYSHTYASCTvhlEDGSRLApyaaftalfhsssfllcLLVLCFA 192
Cdd:cd15130 111 FKAKTLMSRSRTKKFISAIWLASALLAIPMLFTM--GLQNESDDGT---HPGGLVC-----------------TPIVDTA 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 193 YLKVlrvarshckridVITVQTL------LLLVDIHPSVKERCLAQQKKRRQRATKKICIfigSFVLCFSPYVVTRQLVE 266
Cdd:cd15130 169 TLKV------------VIQVNTFmsflfpMLVTSILNTVIANKLVQALRRGVLVLRAVVI---AFVVCWLPYHVRRLMFC 233
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*...
gi 47220248 267 LIPS-------VHIPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRKVL 307
Cdd:cd15130 234 YISDeqwttflFDFYHYFYMLTNALFYVSSAINPILYNLVSANFRQVF 281
7tmA_5-HT1B_1D cd15333
serotonin receptor subtypes 1B and 1D, member of the class A family of seven-transmembrane G ...
8-260 2.78e-05

serotonin receptor subtypes 1B and 1D, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT1 receptors, one of 14 mammalian 5-HT receptors, is a member of the class A of GPCRs and is activated by the endogenous neurotransmitter and peripheral signal mediator serotonin (5-hydroxytryptamine, 5-HT). The 5-HT1 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. The 5-HT1 receptor subfamily includes 5 subtypes: 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as the 5-HT2C receptor. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320455 [Multi-domain]  Cd Length: 265  Bit Score: 44.79  E-value: 2.78e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELrsHVPGIF-ILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFA 86
Cdd:cd15333   6 SLAVLLALITLATTLSNAFVIATIYLTRKL--HTPANYlIASLAVTDLLVSILVMPISIVYTVTGTWTLGQVVCDIWLSS 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  87 ETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGYSHTYASCTVHlEDGSR 166
Cdd:cd15333  84 DITCCTASILHLCVIALDRYWAITDAVEYSKKRTPKRAAVMIALVWVISISISLPPFFWRQAKAEEEVSECVVN-TDHIL 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 167 LAPYAAFTALFhsssfllcllvlcfaylkvlrvarshckridvitVQTLLLLVdihpsVKERCLAQQKKRRQRATKKICI 246
Cdd:cd15333 163 YTVYSTVGAFY----------------------------------IPTLLLIA-----LYGRIYVEARARERKATKTLGI 203
                       250
                ....*....|....
gi 47220248 247 FIGSFVLCFSPYVV 260
Cdd:cd15333 204 ILGAFIVCWLPFFI 217
7tmA_5-HT6 cd15054
serotonin receptor subtype 6, member of the class A family of seven-transmembrane G ...
7-152 2.92e-05

serotonin receptor subtype 6, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT6 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the mammalian central nervous system (CNS). 5-HT6 receptors are selectively linked to G proteins of the G(s) family, which positively stimulate adenylate cyclase, causing cAMP formation and activation of protein kinase A. The 5-HT6 receptors mediates excitatory neurotransmission and are involved in learning and memory; thus they are promising targets for the treatment of cognitive impairment. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320182 [Multi-domain]  Cd Length: 267  Bit Score: 44.80  E-value: 2.92e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   7 FLLEVCVLVTAVVSLLtnlsVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFA 86
Cdd:cd15054   5 AFLCLIILLTVAGNSL----LILLIFTQRSLRN-TSNYFLVSLFMSDLMVGLVVMPPAMLNALYGRWVLARDFCPIWYAF 79
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 47220248  87 ETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGYSH 152
Cdd:cd15054  80 DVMCCSASILNLCVISLDRYLLIISPLRYKLRMTPPRALALILAAWTLAALASFLPIELGWHELGH 145
7tmA_mAChR cd15049
muscarinic acetylcholine receptor subfamily, member of the class A family of ...
13-136 3.17e-05

muscarinic acetylcholine receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of mAChRs by agonist (acetylcholine) leads to a variety of biochemical and electrophysiological responses. In general, the exact nature of these responses and the subsequent physiological effects mainly depend on the molecular and pharmacological identity of the activated receptor subtype(s). All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341322 [Multi-domain]  Cd Length: 262  Bit Score: 44.62  E-value: 3.17e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  13 VLVTAVVSLLT---NLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCqaasfaETF 89
Cdd:cd15049   4 CIATGSLSLVTvggNILVILSFRVNRQLRT-VNNYFLLSLACADLIIGLVSMNLYTVYLVMGYWPLGPLLC------DLW 76
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|...
gi 47220248  90 LTTNAMLSMAA------LSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSL 136
Cdd:cd15049  77 LALDYVASNASvmnlllISFDRYFSVTRPLTYRAKRTPKRAILMIALAWVISF 129
7tmA_EBI2 cd15159
Epstein-Barr virus (EBV)-induced gene 2, member of the class A family of seven-transmembrane G ...
18-258 3.37e-05

Epstein-Barr virus (EBV)-induced gene 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Epstein-Barr virus-induced G-protein coupled receptor 2 (EBI2), also called GPR183, is activated by 7alpha, 25-dihydroxyxcholesterol (7alpha, 25-OHC), an oxysterol. EBI2 was originally identified as one of major genes induced in the Burkitt's lymphoma cell line BL41by EBV infection. EBI2 is involved in regulating B cell migration and responses, and is also implicated in human diseases such as type I diabetes, multiple sclerosis, and cancers.


Pssm-ID: 320287 [Multi-domain]  Cd Length: 286  Bit Score: 44.65  E-value: 3.37e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  18 VVSLLTNLSVLLCYCQSSElRSHVPGIFILNLSFSNILLAaINMPT--TFLGVAENGkPFGDPFCQAASFAETFLTTNAM 95
Cdd:cd15159  12 VFGLLGNTLALHVICQKRK-KINSTTLYLINLAVSDILFT-LALPGriAYYALGFDW-PFGDWLCRLTALLFYINTYAGV 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  96 LSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMnwggyshtyascTVHLEDGSRLA--PYAAF 173
Cdd:cd15159  89 NFMTCLSVDRYIAVVHPLRRHRLRKVKVVRYICVFVWVLVFLQTLPLLFM------------PMTKEMGGRITcmEYPNF 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 174 TALFHSssfllcllvlcfAYLKVLRVARSHCKRIDVITVQTLLLLVDIHPSVKERCLAQQKKRRQRATKKICIFIGSFVL 253
Cdd:cd15159 157 EKIKRL------------PLILLGACVIGFGVPVGIILFCYSQITLKLCRTAKENPLTEKSGHHKKACNVILLVLLVFVV 224

                ....*
gi 47220248 254 CFSPY 258
Cdd:cd15159 225 CFSPY 229
7tmA_alpha2C_AR cd15323
alpha-2 adrenergic receptors subtype C, member of the class A family of seven-transmembrane G ...
18-305 4.27e-05

alpha-2 adrenergic receptors subtype C, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback.


Pssm-ID: 320446 [Multi-domain]  Cd Length: 261  Bit Score: 44.16  E-value: 4.27e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  18 VVSLLTNLSVLLCYCQSSELRSHvPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNAMLS 97
Cdd:cd15323  12 VFTIVGNVLVVIAVLTSRALRAP-QNLFLVSLASADILVATLVMPFSLANELMGYWYFGQVWCNIYLALDVLFCTSSIVH 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  98 MAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLL-MNWGGYSHTYASCtvHLEDGSRLAPYAAFTAL 176
Cdd:cd15323  91 LCAISLDRYWSVTQAVEYNLKRTPRRVKAIIVTVWLISAVISFPPLIsMYRDPEGDVYPQC--KLNDETWYILSSCIGSF 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 177 FhsssflLCLLVLCFAYLKVLRVArshckridvitvqtllllvdihpsvkerclaqqKKRRQRATKKICIFIGSFVLCFS 256
Cdd:cd15323 169 F------APCLIMILVYIRIYRVA---------------------------------KAREKRFTFVLAVVMGVFVVCWF 209
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 47220248 257 P-------YVVTRQLVELIPSVHIPRYWgvttkcLTYAKTSTDAFVYCLLRQQYRK 305
Cdd:cd15323 210 PfffsyslYGICREACEVPEPLFKFFFW------IGYCNSSLNPVIYTIFNQDFRR 259
7tmA_mAChR_GAR-2-like cd15302
muscarinic acetylcholine receptor GAR-2 and similar proteins, member of the class A family of ...
8-307 4.33e-05

muscarinic acetylcholine receptor GAR-2 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of mAChRs by agonist (acetylcholine) leads to a variety of biochemical and electrophysiological responses. In general, the exact nature of these responses and the subsequent physiological effects mainly depend on the molecular and pharmacological identity of the activated receptor subtype(s). All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320429 [Multi-domain]  Cd Length: 266  Bit Score: 44.35  E-value: 4.33e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRsHVPGIFILNLSFSNILLAAINMPTTFLGVAENGK-PFGDPFCQAASFA 86
Cdd:cd15302   2 LLALITAILSIITVIGNILVLLSFYVDRNIR-QPSNYFIASLAVSDLLIGLESMPFYTVYVLNGDYwPLGWVLCDLWLSV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  87 ETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWL-QSLGFSLTqlLMNWGGYSHTYASctvhLEDGS 165
Cdd:cd15302  81 DYTVCLVSIYTVLLITIDRYCSVKIPAKYRNWRTPRKVLLIIAITWIiPALLFFIS--IFGWQYFTGQGRS----LPEGE 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 166 RLAPYAAfTALFHsssfllclLVLCFAYLKVLRVArshckridvitvqTLLLLVDIHpsvkerclaQQKKRRQRATKKIC 245
Cdd:cd15302 155 CYVQFMT-DPYFN--------MGMYIGYYWTTLIV-------------MLILYAGIY---------RAANRARKALRTIT 203
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47220248 246 IFIGSFVLCFSPYVVTrQLVELIPSVH--IPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRKVL 307
Cdd:cd15302 204 FILGAFVICWTPYHIL-ATIYGFCEAPpcVNETLYTISYYLCYMNSPINPFCYALANQQFKKTF 266
7tmA_SSTR2 cd15971
somatostatin receptor type 2, member of the class A family of seven-transmembrane G ...
14-305 4.76e-05

somatostatin receptor type 2, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled somatostatin receptors (SSTRs), which display strong sequence similarity with opioid receptors, binds somatostatin, a polypeptide hormone that regulates a wide variety of physiological such as neurotransmission, endocrine secretion, cell proliferation, and smooth muscle contractility. SSTRs are composed of five distinct subtypes (SSTR1-5) which are encoded by separate genes on different chromosomes. SSTR2 plays critical roles in growth hormone secretion, glucagon secretion, and immune responses. SSTR2 is expressed in the normal human pituitary and in nearly all pituitary growth hormone adenomas.


Pssm-ID: 320637 [Multi-domain]  Cd Length: 279  Bit Score: 44.06  E-value: 4.76e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  14 LVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAaINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTN 93
Cdd:cd15971   8 FVVCIIGLCGNTLVIYVILRYAKMKT-VTNIYILNLAIADELFM-LGLPFLAIQVALVHWPFGKAICRVVMTVDGINQFT 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  94 AMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGYSHTYASCTVhLEDGSRLAPYAAF 173
Cdd:cd15971  86 SIFCLTVMSIDRYLAVVHPIKSAKWRKPRTAKMINMAVWGVSLLVILPIMIYAGVQTKHGRSSCTI-IWPGESSAWYTGF 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 174 TALFHSSSFLLCLLVLCFAYLKVLRVARSHCKRIDVitvqtllllvdihpsvkerclAQQKKRRQRATKKICIFIGSFVL 253
Cdd:cd15971 165 IIYTFILGFFVPLTIICLCYLFIIIKVKSSGIRVGS---------------------SKRKKSEKKVTRMVSIVVAVFVF 223
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*
gi 47220248 254 CFSPYV---VTRQLVELIPSVHIPRYWGVTTkCLTYAKTSTDAFVYCLLRQQYRK 305
Cdd:cd15971 224 CWLPFYifnVSSVSVSISPTPGLKGMFDFVV-VLSYANSCANPILYAFLSDNFKK 277
7tmA_OR9G-like cd15418
olfactory receptor subfamily 9G and related proteins, member of the class A family of ...
8-133 4.96e-05

olfactory receptor subfamily 9G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 9G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320540 [Multi-domain]  Cd Length: 281  Bit Score: 44.00  E-value: 4.96e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELrsHVPG-IFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFA 86
Cdd:cd15418   3 ILFVVFLLSYILTLVGNLTLIALICLDSRL--HTPMyFFVGNLSFLDLWYSSVYTPKILADCISKDKSISFAGCAAQFFF 80
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 47220248  87 ETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWL 133
Cdd:cd15418  81 SAGLAYSECFLLAAMAYDRYVAICNPLLYSSAMSKKLCMGLVAASYL 127
7tmA_NTSR2 cd15356
neurotensin receptor subtype 2, member of the class A family of seven-transmembrane G ...
46-140 5.25e-05

neurotensin receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Neurotensin (NTS) is a 13 amino-acid neuropeptide that functions as both a neurotransmitter and a hormone in the nervous system and peripheral tissues, respectively. NTS exerts various biological activities through activation of the G protein-coupled neurotensin receptors, NTSR1 and NTSR2. In the brain, NTS is involved in the modulation of dopamine neurotransmission, opioid-independent analgesia, hypothermia, and the inhibition of food intake, while in the periphery NTS promotes the growth of various normal and cancer cells and acts as a paracrine and endocrine modulator of the digestive tract. The third neurotensin receptor, NTSR3 or also called sortilin, is not a G protein-coupled receptor.


Pssm-ID: 320478 [Multi-domain]  Cd Length: 285  Bit Score: 44.09  E-value: 5.25e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  46 ILNLSFSNILLAAINMPTTFLGVAENGKP--FGDPFCQAASFAETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRD 123
Cdd:cd15356  42 LVSLALSDLLILLISVPIELYNFVWFHYPwvFGDLVCRGYYFVRDICSYATVLNIASLSAERYLAICQPLRAKRLLSKRR 121
                        90
                ....*....|....*..
gi 47220248 124 ALLMVAYSWLQSLGFSL 140
Cdd:cd15356 122 TKWLLALIWASSLGFAL 138
7tmA_Vasopressin_Oxytocin cd15196
vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G ...
10-143 5.35e-05

vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) and oxytocin are synthesized in the hypothalamus and are released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320324 [Multi-domain]  Cd Length: 264  Bit Score: 44.15  E-value: 5.35e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  10 EVCVLVTA-VVSLLTNLSVLLCYCQSSELRSHVPgIFILNLSFSNILLAAINMPTT--------FLGvaengkpfGDPFC 80
Cdd:cd15196   3 EIAVLATIlVLALFGNSCVLLVLYRRRRKLSRMH-LFILHLSVADLLVALFNVLPQliwdityrFYG--------GDLLC 73
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 47220248  81 QAASFAETF---LTTNAMLSMAalsVDRWIAVVFPLSySSKMRYRDALLMVAYSWLQSLGFSLTQL 143
Cdd:cd15196  74 RLVKYLQVVgmyASSYVLVATA---IDRYIAICHPLS-SHRWTSRRVHLMVAIAWVLSLLLSIPQL 135
7tmA_5-HT2B cd15306
serotonin receptor subtype 2B, member of the class A family of seven-transmembrane G ...
45-140 5.97e-05

serotonin receptor subtype 2B, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341347 [Multi-domain]  Cd Length: 277  Bit Score: 44.05  E-value: 5.97e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  45 FILNLSFSNILLAAINMPTTFLGVA-ENGKPFGDPFCQAASFAETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRD 123
Cdd:cd15306  38 FLMSLAVADLLVGLFVMPIALLTILfEAMWPLPLVLCPIWLFLDVLFSTASIMHLCAISLDRYIAIKKPIQASQYNSRAT 117
                        90
                ....*....|....*..
gi 47220248 124 ALLMVAYSWLQSLGFSL 140
Cdd:cd15306 118 AFIKITVVWLISIGIAI 134
7tmA_Encephalopsin cd15078
encephalopsins (opsin-3), member of the class A family of seven-transmembrane G ...
8-307 5.97e-05

encephalopsins (opsin-3), member of the class A family of seven-transmembrane G protein-coupled receptors; Encephalopsin, also called Opsin-3 or Panopsin, is a mammalian extra-retinal opsin that is highly localized in the brain. It is thought to play a role in encephalic photoreception. Encephalopsin belongs to the class A of the G protein-coupled receptors and shows strong homology to the vertebrate visual opsins.


Pssm-ID: 320206 [Multi-domain]  Cd Length: 279  Bit Score: 44.05  E-value: 5.97e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRSHVpGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAE 87
Cdd:cd15078   2 LLALLIATIGFLGVCNNLLVLILYYKFKRLRTPT-NLLLVNISLSDLLVSLLGVTFTFMSCVRGRWVFDVAGCVWDGFSN 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRdallMVAYSWLQSLGFSLTQLLmNWGGYSHTYASCTVHLEDGSRL 167
Cdd:cd15078  81 SLFGIVSIMTLTVLAYERYIRVVHAKVVNFSWSWR----AITYIWLYSLAWTGAPLL-GWNRYTLEVHGLGCSFDWKSKD 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 168 APYAAFTALFHSSSFLLCLLVLCFAYLKVLRVARSHCKRIDVITVQTLLLLvdihpsvkerclaqqkKRRQRATKKICIF 247
Cdd:cd15078 156 PNDTSFVLLFFLGCLVVPLGIMAYCYGHILYEIRMLRSVEDLQTFQVIKIL----------------KYEKKVAKMCLLM 219
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 248 IGSFVLCFSPYVVTRQLVELIPSVHIPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRKVL 307
Cdd:cd15078 220 ISTFLICWMPYAVVSLLVTSGYSKLVTPTIAIIPSLFAKSSTAYNPVIYIFMIRKFRQCL 279
7tmA_RNL3R1 cd15926
relaxin 3 receptor 1 (RNL3R1), member of the class A family of seven-transmembrane G ...
74-307 6.23e-05

relaxin 3 receptor 1 (RNL3R1), member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled receptor RNL3R1 is also known as GPCR135, relaxin family peptide receptor 3 (RXFP3), and somatostatin- and angiotensin-like peptide receptor (SALPR). RNL3/relaxin-3, a member of the insulin superfamily, is an endogenous neuropeptide ligand for RNL3R1. RNL3R1 is predominantly expressed in brain regions and implicated in stress, anxiety, and feeding, and metabolism. RNL3R1 signals through G(i) protein and inhibit adenylate cyclase, thereby inhibit cAMP accumulation, and also activates Erk1/2 signaling pathway.


Pssm-ID: 320592 [Multi-domain]  Cd Length: 288  Bit Score: 43.73  E-value: 6.23e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  74 PFGDPFCQAASFAETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGYSHT 153
Cdd:cd15926  68 LFGKAMCKIVSYVTAMNMYASVFFLTAMSVARYHSVASALKSKRRRGCCSAKWLCVLIWVLAILASLPNAIFSTTATVSN 147
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 154 YASCTVHLEDGSRLAPYaaFTALFHSSsfllcllvlcfaylkvlRVARSHCKRIDVITVQTLLLLVDIhpsVKERCLAQQ 233
Cdd:cd15926 148 EELCLVKFPDNRGNAQF--WLGLYHAQ-----------------KVLLGFLIPLGIISLCYLLLVRFI---TDKNITGSS 205
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 234 KKRRQRATKKICIFIGSFVLCFSP--YVVTRQLVELIPSVHIPRYWGVT-------TKCLTYAKTSTDAFVYCLLRQQYR 304
Cdd:cd15926 206 TKRRSKVTKSVTIVVLSFFLCWLPnqALTTWGILIKLNVVHFSYEYFTTqvyifpiTVCLAHSNSCLNPILYCLMRREFR 285

                ...
gi 47220248 305 KVL 307
Cdd:cd15926 286 KAL 288
7tmA_V1bR cd15386
vasopressin receptor subtype 1B, member of the class A family of seven-transmembrane G ...
10-145 6.85e-05

vasopressin receptor subtype 1B, member of the class A family of seven-transmembrane G protein-coupled receptors; The V1b receptor is specifically expressed in corticotropes of the anterior pituitary and plays a critical role in regulating the activity of hypothalamic-pituitary-adrenal axis, a key part of the neuroendocrine system that controls reactions to stress, by maintaining adrenocorticotropic hormone (ACTH) and corticosterone levels. Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) is synthesized in the hypothalamus and is released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320508 [Multi-domain]  Cd Length: 302  Bit Score: 44.02  E-value: 6.85e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  10 EVCVLVTA-VVSLLTNLSVLLCYCQSSELRSHVpGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAET 88
Cdd:cd15386   3 EIGVLAAIlVVATAGNLAVLLAMYRMRRKMSRM-HLFVLHLALTDLVVALFQVLPQLIWEITYRFQGPDLLCRAVKYLQV 81
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  89 ---FLTTNAMLSMaalSVDRWIAVVFPLSySSKMRYRDALLMVAYSWLQSLGFSLTQLLM 145
Cdd:cd15386  82 lsmFASTYMLIMM---TVDRYIAVCHPLR-TLQQPSRQAYLMIGATWLLSCILSLPQVFI 137
7tmA_OR2A-like cd15420
olfactory receptor subfamily 2A and related proteins, member of the class A family of ...
7-147 7.16e-05

olfactory receptor subfamily 2A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320542 [Multi-domain]  Cd Length: 277  Bit Score: 43.47  E-value: 7.16e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   7 FLLEVCVLVTAVVSLLTNLSVLLCYCQSSELrsHVPGIFIL-NLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASF 85
Cdd:cd15420   1 LLLFGLFSLLYIFTLLGNGLILGLIWLDSRL--HTPMYFFLsHLAVVDICYASSTVPHMLGNLLKQRKTISFAGCGTQMY 78
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47220248  86 AE-TFLTTNAMLsMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNW 147
Cdd:cd15420  79 LFlALAHTECVL-LAVMSYDRYVAICHPLRYTVIMNWRVCTTLAATSWACGFLLALVHVVLLL 140
7tmA_5-HT1E cd15335
serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G ...
13-160 7.68e-05

serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT1 receptors, one of 14 mammalian 5-HT receptors, is a member of the class A of GPCRs and is activated by the endogenous neurotransmitter and peripheral signal mediator serotonin (5-hydroxytryptamine, 5-HT). The 5-HT1 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. The 5-HT1 receptor subfamily includes 5 subtypes: 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as the 5-HT2C receptor. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320457 [Multi-domain]  Cd Length: 258  Bit Score: 43.37  E-value: 7.68e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  13 VLVTAVVSLLT---NLSVLLCYCQSSELrsHVPGIF-ILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAET 88
Cdd:cd15335   4 VLTLALITILTtvlNSAVIAAICTTKKL--HQPANYlICSLAVTDFLVAVLVMPLSITYIVMDTWTLGYFICEIWLSVDM 81
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47220248  89 FLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGYSHTYASCTVH 160
Cdd:cd15335  82 TCCTCSILHLCVIALDRYWAITDAIEYARKRTAKRAGLMILTVWTISIFISIPPLFWRNHHDANIPSQCIIQ 153
7tmA_OR4Q2-like cd15938
olfactory receptor 4Q2 and related proteins, member of the class A family of ...
8-145 7.78e-05

olfactory receptor 4Q2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320604 [Multi-domain]  Cd Length: 265  Bit Score: 43.32  E-value: 7.78e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRShvPGIFIL-NLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFA 86
Cdd:cd15938   2 LLFALFLLAYTMVLVGNLLIMVTVRSDPKLSS--PMYFLLgNLSFLDLCYSTVTCPKMLVDFLSQRKAISYEACIAQLFF 79
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 47220248  87 ETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLM 145
Cdd:cd15938  80 LHFVGAAEMFLLTVMAYDRYVAICKPLHYTTIMSRRLCWVLVAASWAGGFLHSIVQTLL 138
7tmA_NPY6R cd15396
neuropeptide Y receptor type 6, member of the class A family of seven-transmembrane G ...
7-144 8.07e-05

neuropeptide Y receptor type 6, member of the class A family of seven-transmembrane G protein-coupled receptors; NPY is a 36-amino acid peptide neurotransmitter with a C-terminal tyrosine amide residue that is widely distributed in the brain and the autonomic nervous system of many mammalian species. NPY exerts its functions through five, G-protein coupled receptor subtypes including NPY1R, NPY2R, NPY4R, NPY5R, and NPY6R; however, NPY6R is not functional in humans. NYP receptors are also activated by its two other family members, peptide YY (PYY) and pancreatic polypeptide (PP). They typically couple to G(i) or G(o) proteins, which leads to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels, and are involved in diverse physiological roles including appetite regulation, circadian rhythm, and anxiety.


Pssm-ID: 320518 [Multi-domain]  Cd Length: 293  Bit Score: 43.67  E-value: 8.07e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   7 FLLEVCVLVTAVVSLLTNLSVLLCYCQSSElRSHVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFA 86
Cdd:cd15396   1 FLLIIAYSVVTIVGLFGNLCLITIIKKQKE-EHNVTNILIANLSLSDVLVCVMCIPFTAVYTLMDHWIFGETMCKLTSFV 79
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  87 ETFLTTNAMLSMAALSVDRWIAVVFPLSY--SSKMRYRDALLMVAYSWLQSLGFSLTQLL 144
Cdd:cd15396  80 QSVSVSVSIFSLVLIAIERYQLIVNPRGWkpSASHAYWGIVLIWLFSLMISIPFLIFHQL 139
7tmA_OR4D-like cd15936
olfactory receptor 4D and related proteins, member of the class A family of ...
7-145 8.57e-05

olfactory receptor 4D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320602 [Multi-domain]  Cd Length: 267  Bit Score: 43.48  E-value: 8.57e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   7 FLLEVCVLVTAVVSLLTNLSVLLCycqssELRSHVPGIFIL-NLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASF 85
Cdd:cd15936   4 FLVFLLVYLTTWLGNLLIIITVIS-----DPHLHTPMYFLLaNLAFLDISFSSVTAPKMLSDLLSQTKTISFNGCMAQMF 78
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  86 AETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLM 145
Cdd:cd15936  79 FFHFTGGAEVFLLSVMAYDRYIAIHKPLHYLTIMNQGVCTGLVAGSWLGGFAHSIVQVAL 138
7tmA_OR1A-like cd15235
olfactory receptor subfamily 1A and related proteins, member of the class A family of ...
18-146 8.61e-05

olfactory receptor subfamily 1A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1A, 1B, 1K, 1L, 1Q and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320363 [Multi-domain]  Cd Length: 278  Bit Score: 43.37  E-value: 8.61e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  18 VVSLLTNLSVLLCYCQSSELrsHVPGIFIL-NLSFSNILLAAINMPTTFLGVAENGK--PFGDPFCQAASFAeTFLTTNA 94
Cdd:cd15235  13 LLTLLGNLLIVLLIRSDPRL--HTPMYFFLsHLSLVDICFTSTTVPKMLANLLSGSKtiSYAGCLAQMYFFI-AFGNTDS 89
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|...
gi 47220248  95 MLsMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQ-LLMN 146
Cdd:cd15235  90 FL-LAVMAYDRYVAICHPLHYATVMSPKRCLLLVAGSWLLSHLHSLLHtLLMS 141
7tmA_5-HT1A_vertebrates cd15330
serotonin receptor subtype 1A from vertebrates, member of the class A family of ...
40-304 1.06e-04

serotonin receptor subtype 1A from vertebrates, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT1 receptors, one of 14 mammalian 5-HT receptors, is a member of the class A of GPCRs and is activated by the endogenous neurotransmitter and peripheral signal mediator serotonin (5-hydroxytryptamine, 5-HT). The 5-HT1 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. The 5-HT1 receptor subfamily includes 5 subtypes: 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as the 5-HT2C receptor. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320453 [Multi-domain]  Cd Length: 260  Bit Score: 43.04  E-value: 1.06e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  40 HVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKM 119
Cdd:cd15330  33 NVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKWTLGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKR 112
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 120 RYRDALLMVAYSWLqsLGFSLT-QLLMNWGGYSHTYA--SCTVHLEDGSRLapYAAFTALFhsssflLCLLVLCFAYLKV 196
Cdd:cd15330 113 TPRRAAVLISLTWL--IGFSISiPPMLGWRTPEDRSDpdACTISKDPGYTI--YSTFGAFY------IPLILMLVLYGRI 182
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 197 LRVArshckridvitvqtllllvdihpsvkerclaqqkKRRQRATKKICIFIGSFVLCFSPYVVTRQLVELIPS-VHIPR 275
Cdd:cd15330 183 FKAA----------------------------------ARERKTVKTLGIIMGTFILCWLPFFIVALVLPFCEStCHMPE 228
                       250       260
                ....*....|....*....|....*....
gi 47220248 276 YWGVTTKCLTYAKTSTDAFVYCLLRQQYR 304
Cdd:cd15330 229 LLGAIINWLGYSNSLLNPIIYAYFNKDFQ 257
7tmA_PrRP_R cd15394
prolactin-releasing peptide receptor, member of the class A family of seven-transmembrane G ...
8-154 1.34e-04

prolactin-releasing peptide receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Prolactin-releasing peptide (PrRP) receptor (previously known as GPR10) is expressed in the central nervous system with the highest levels located in the anterior pituitary and is activated by its endogenous ligand PrRP, a neuropeptide possessing a C-terminal Arg-Phe-amide motif. There are two active isoforms of PrRP in mammals: one consists of 20 amino acids (PrRP-20) and the other consists of 31 amino acids (PrRP-31), where PrRP-20 is a C-terminal fragment of PrRP-31. Binding of PrRP to the receptor coupled to G(i/o) proteins activates the extracellular signal-related kinase (ERK) and it can also couple to G(q) protein leading to an increase in intracellular calcium and activation of c-Jun N-terminal protein kinase (JNK). The PrRP receptor shares significant sequence homology with the neuropeptide Y (NPY) receptor, and micromolar levels of NPY can bind and completely inhibit the PrRP-evoked intracellular calcium response in PrRP receptor-expressing cells, suggesting that the PrRP receptor shares a common ancestor with the NPY receptors. PrRP has been shown to reduce food intake and body weight and modify body temperature when administered in rats. It also has been shown to decrease circulating growth hormone levels by activating somatostatin-secreting neurons in the hypothalamic periventricular nucleus.


Pssm-ID: 320516 [Multi-domain]  Cd Length: 286  Bit Score: 42.80  E-value: 1.34e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMP-TTFLGVAENGKPFGDPFCQAASFA 86
Cdd:cd15394   2 LIIPLYSLVVLVGVVGNYLLIYVICRTKKMHN-VTNFLIGNLAFSDMLMCATCVPlTLAYAFEPRGWVFGRFMCYFVFLM 80
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 47220248  87 ETFLTTNAMLSMAALSVDRWIAVVFPLsySSKMRYRDALLMVAYSWLQSLGFSLTQLLmnwggysHTY 154
Cdd:cd15394  81 QPVTVYVSVFTLTAIAVDRYYVTVYPL--RRRISRRTCAYIVAAIWLLSCGLALPAAA-------HTY 139
7tmA_Glyco_hormone_R cd15136
glycoprotein hormone receptors, member of the class A family of seven-transmembrane G ...
8-161 1.37e-04

glycoprotein hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The glycoprotein hormone receptors (GPHRs) are seven transmembrane domain receptors with a very large extracellular N-terminal domain containing many leucine-rich repeats responsible for hormone recognition and binding. The glycoprotein hormone family includes three gonadotropins: luteinizing hormone (LH), follicle-stimulating hormone (FSH), chorionic gonadotropin (CG) and a pituitary thyroid-stimulating hormone (TSH). The glycoprotein hormones exert their biological functions by interacting with their cognate GPCRs. Both LH and CG bind to the same receptor, the luteinizing hormone-choriogonadotropin receptor (LHCGR); FSH binds to FSH-R and TSH to TSH-R. GPHRs couple primarily to the G(s)-protein and promotes cAMP production, but also to the G(i)- or G(q)-protein.


Pssm-ID: 320264 [Multi-domain]  Cd Length: 275  Bit Score: 42.59  E-value: 1.37e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSElRSHVPGIFILNLSFSNI-------LLAAINMPTtfLGVAENgkpFGDPF- 79
Cdd:cd15136   2 WLRIGVWFVFLLALVGNIIVLLVLLTSRT-KLTVPRFLMCNLAFADFcmgiylgLLAIVDAKT--LGEYYN---YAIDWq 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  80 ----CQAASFAETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLqslgFSLTQLLMNWGGYShTYA 155
Cdd:cd15136  76 tgagCKTAGFLAVFSSELSVFTLTVITLERWYAITHAMHLNKRLSLRQAAIIMLGGWI----FALIMALLPLVGVS-SYS 150

                ....*.
gi 47220248 156 SCTVHL 161
Cdd:cd15136 151 KTSICL 156
7tmA_LPAR5 cd15154
lysophosphatidic acid receptor 5, member of the class A family of seven-transmembrane G ...
8-270 1.45e-04

lysophosphatidic acid receptor 5, member of the class A family of seven-transmembrane G protein-coupled receptors; Lysophosphatidic acid receptor 5 (LPAR5) is a G protein-coupled receptor that binds the bioactive lipid lysophosphatidic acid (LPA) and is involved in maintenance of human hair growth. Phylogenetic analysis of the class A GPCRs shows that LAPR5 is classified into the cluster consisting receptors that are preferentially activated by adenosine and uridine nucleotides. Although LPA6 (P2Y5) is expressed in human hair follicle cells, LPA4 and LPA5 are not. These three receptors are highly homologous and mediate an increase in intracellular cAMP production. Activation of LPAR5 is coupled to G(q) and G(12/13) proteins.


Pssm-ID: 320282 [Multi-domain]  Cd Length: 285  Bit Score: 42.83  E-value: 1.45e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNiLLAAINMPTTFLGVAENGKPFGDPFCQAASFAE 87
Cdd:cd15154   2 LHLVGYSLLFPVGLLLNAVALWVFVRYLRLHS-VVSIYMCNLALSD-LLFTLSLPLRIYYYANHYWPFGNFLCQFSGSIF 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMnwggysHTYASCTVHLEDGSRL 167
Cdd:cd15154  80 QMNMYGSCLFLMCINVDRYLAIVHPLRFRHLRRPKVARLLCLAVWALILGGSVPAAIV------HSSSDCLLHGEKVYRC 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 168 apYAAFTALFHSSSFLLCLLVLCFAYLKVLrVARSHCkridviTVQTLLLLVdihpsvkeRCLAQQKKRRQRATKKICIF 247
Cdd:cd15154 154 --FESFSDNDWKGLLPLVVLAEILGFLLPL-AAVLYC------SCRIFVELC--------RTQEPQQGRRRKTVRLLLVN 216
                       250       260
                ....*....|....*....|...
gi 47220248 248 IGSFVLCFSPYVVTRQLVELIPS 270
Cdd:cd15154 217 LVIFLICFVPYNTTLAVYGLLRA 239
7tmA_OR10S1-like cd15941
olfactory receptor subfamily 10S1 and related proteins, member of the class A family of ...
7-133 1.58e-04

olfactory receptor subfamily 10S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10S1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320607 [Multi-domain]  Cd Length: 277  Bit Score: 42.53  E-value: 1.58e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   7 FLLEVCVLVTAVVSLLTNLSVLLCYCQSSELRSHVPGIFILNLSFSNILLAAINMPTTFLG-VAENGKPFGDPFCQAASF 85
Cdd:cd15941   1 SLFFLLFLLIYLLTVLGNLLILLTIGSDPHLHGLPMYHFLGHLSFLDACLSSVTVPKVLAGlLTLSGRTISFEGCVVQLY 80
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*...
gi 47220248  86 AETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWL 133
Cdd:cd15941  81 AFHFLASTECFLYTVMAYDRYLAICHPLHYPTAMNRRMCAGLAGGTWA 128
7tmA_MCHR1 cd15338
melanin concentrating hormone receptor 1, member of the class A family of seven-transmembrane ...
15-136 1.61e-04

melanin concentrating hormone receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Melanin-concentrating hormone receptor (MCHR) binds melanin concentrating hormone and is presumably involved in the neuronal regulation of food intake and energy homeostasis. Despite strong homology with somatostatin receptors, MCHR does not appear to bind somatostatin. Two MCHRs have been characterized in vertebrates, MCHR1 and MCHR2. MCHR1 is expressed in all mammals, whereas MCHR2 is only expressed in the higher order mammals, such as humans, primates, and dogs, and is not found in rodents. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320460 [Multi-domain]  Cd Length: 282  Bit Score: 42.49  E-value: 1.61e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  15 VTAVVSLLTNLSVLLCYCQSSELR--SHVPGIFILNLSFSNiLLAAINMPTTFLGVAENGK-PFGDPFCQAASFAETFLT 91
Cdd:cd15338   9 VICFLGIIGNSIVIYTIVKKSKFRcqQTVPDIFIFNLSIVD-LLFLLGMPFLIHQLLGNGVwHFGETMCTLITALDTNSQ 87
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*
gi 47220248  92 TNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSL 136
Cdd:cd15338  88 ITSTYILTVMTLDRYLATVHPIRSTKIRTPRVAVAVICLVWILSL 132
7tmA_OR13-like cd15232
olfactory receptor family 13 and related proteins, member of the class A family of ...
8-133 1.68e-04

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13A1 and 13G1) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320360 [Multi-domain]  Cd Length: 270  Bit Score: 42.63  E-value: 1.68e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELrsHVPG-IFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFA 86
Cdd:cd15232   2 LLFWLFLFLYAAALTGNSLIILAISTSPKL--HTPMyFFLVNLSLVDIICTSTVVPKLLQNLLTERKTISFGGCMAQLYF 79
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 47220248  87 ETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWL 133
Cdd:cd15232  80 FTWSLGSELLLLTAMAYDRYVAICHPLHYSTIMRKEVCVGLATGVWA 126
7tmA_OR13H-like cd15431
olfactory receptor subfamily 13H and related proteins, member of the class A family of ...
13-145 1.73e-04

olfactory receptor subfamily 13H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 13H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320548 [Multi-domain]  Cd Length: 269  Bit Score: 42.60  E-value: 1.73e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  13 VLVTAVVSLLTNLSVLLCYCQSSELrsHVPGIFIL-NLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLT 91
Cdd:cd15431   7 LLIVYLVTLLGNGLIILLIRVDSQL--HTPMYFFLsNLSFLDICYTTSSVPQMLVNCLSDRPTISYSRCLAQMYISLFLG 84
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....
gi 47220248  92 TNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLM 145
Cdd:cd15431  85 ITECLLLAVMAYDRFVAICNPLRYTLIMSWRVCIQLAAGSWVSAFLLTVIPVLT 138
7tmA_GPR119_R_insulinotropic_receptor cd15104
G protein-coupled receptor 119, also called glucose-dependent insulinotropic receptor, member ...
11-277 1.74e-04

G protein-coupled receptor 119, also called glucose-dependent insulinotropic receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR119 is activated by oleoylethanolamide (OEA), a naturally occurring bioactive lipid with hypophagic and anti-obesity effects. Immunohistochemistry and double-immunofluorescence studies revealed the predominant GPR119 localization in pancreatic polypeptide (PP)-cells of islets. In addition, GPR119 expression is elevated in islets of obese hyperglycemic mice as compared to control islets, suggesting a possible involvement of this receptor in the development of obesity and diabetes. GPR119 has a significant sequence similarity with the members of the endothelial differentiation gene family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320232 [Multi-domain]  Cd Length: 283  Bit Score: 42.36  E-value: 1.74e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  11 VCVLVTAVVSLLTNLSVLLCYCQSSELRSHVPGIFILNLSFSNILLA-AINMPTT--FLGVAENGKPFgdpFCQAASFAE 87
Cdd:cd15104   4 VILAVLSPLIITGNLLVIVALLKLIRKKDTKSNCFLLNLAIADFLVGlAIPGLATdeLLSDGENTQKV---LCLLRMCFV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSL--GFS-LTQLLMNWGGYShtyASCTVHLEDG 164
Cdd:cd15104  81 ITSCAASVLSLAAIAFDRYLALKQPLRYKQIMTGKSAGALIAGLWLYSGliGFLpLISPQFQQTSYK---GKCSFFAAFH 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 165 SRLApYAAFTALFhsssfLLCLLVLCFAYLKVLRVARSHCKRIDVItvqtllllvdihpsvkERCLAQQKKRRQ-----R 239
Cdd:cd15104 158 PRVL-LVLSCMVF-----FPALLLFVFCYCDILKIARVHSRAIYKV----------------EHALARQIHPRRtlsdfK 215
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 47220248 240 ATKKICIFIGSFVLCFSPYVVTrQLVELIPSVHIPRYW 277
Cdd:cd15104 216 AARTVAVLIGCFLLSWLPFQIT-GLVQALCDECKLYDV 252
7tmA_OR2F-like cd15429
olfactory receptor subfamily 2F and related proteins, member of the class A family of ...
9-145 1.96e-04

olfactory receptor subfamily 2F and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320546 [Multi-domain]  Cd Length: 277  Bit Score: 42.39  E-value: 1.96e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   9 LEVCVLVTAVVSLLTNLSVLLCYCQSSELrsHVPGIFIL-NLSFSNILLAAINMP---TTFLgVAENGKPFGDpfCQAAS 84
Cdd:cd15429   3 LFVLFLVMYLLTLLGNFLIILLIRLDPRL--HTPMYFFLsHLSFLDICYTTSVVPqmlAHFL-AEHKTISFAS--CVAQL 77
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 47220248  85 FAETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLM 145
Cdd:cd15429  78 FISLALGGTEFILLAVMAYDRYVAVCHPLRYTVIMSGGLCIQLAAASWTSGFLNSLVQTAF 138
7tmA_OR2B-like cd15947
olfactory receptor subfamily 2B and related proteins, member of the class A family of ...
9-142 1.97e-04

olfactory receptor subfamily 2B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 2 (subfamilies 2B, 2C, 2G, 2H, 2I, 2J, 2W, 2Y) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320613 [Multi-domain]  Cd Length: 270  Bit Score: 42.23  E-value: 1.97e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   9 LEVCVLVTAVVSLLTNLSVLLCYCQSSELrsHVPGIFIL-NLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAE 87
Cdd:cd15947   3 LFVVVLIFYLLTLLGNTAIILLSLLDPRL--HTPMYFFLsNLSFLDLCFTTSIVPQMLVNLWGPDKTISYGGCVTQLYIF 80
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQ 142
Cdd:cd15947  81 LWLGSTECVLLAVMAFDRYVAVCRPLHYTVIMHPRLCVQLAALSWLSGLANSLLQ 135
7tmA_P2Y8 cd15368
purinergic receptor P2Y8, member of the class A family of seven-transmembrane G ...
9-137 2.03e-04

purinergic receptor P2Y8, member of the class A family of seven-transmembrane G protein-coupled receptors; P2Y8 (or P2RY8) expression is often increased in leukemia patients, and it plays a role in the pathogenesis of acute leukemia. P2Y8 is phylogenetically closely related to the protease-activated receptors (PARs), which are activated by serine proteases such as thrombin, trypsin, and tryptase. These proteases cleave the extracellular domain of the receptor to form a new N-terminus, which in turn functions as a tethered ligand. The newly-formed tethered ligand binds intramolecularly to activate the receptor and triggers G-protein binding and intracellular signaling. Four different types of the protease-activated receptors have been identified (PAR1-4) and are predominantly expressed in platelets. PAR1, PA3, and PAR4 are activated by thrombin, whereas PAR2 is activated by trypsin. The PARs are known to couple with several G-proteins including Gi (cAMP inhibitory), G12/13 (Rho and Ras activation), and Gq (calcium signaling) to activate downstream signaling messengers which induces numerous cellular and physiological effects.


Pssm-ID: 320490 [Multi-domain]  Cd Length: 281  Bit Score: 42.45  E-value: 2.03e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   9 LEVCVLVTAVVSLLTNLSVLLCYCQSSELRSHVPgIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAET 88
Cdd:cd15368   3 LPVVYSLVALISIPGNLFSLWLLCFHTKPKTPSI-IFMINLSLTDLMLACFLPFQIVYHIQRNHWIFGKPLCNVVTVLFY 81
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 47220248  89 FLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLG 137
Cdd:cd15368  82 ANMYSSILTMTCISIERYLGVVYPMRSMRWRKKRYAVAACIGMWLLVLT 130
7tmA_GRPR cd15124
gastrin-releasing peptide receptor, member of the class A family of seven-transmembrane G ...
15-257 2.44e-04

gastrin-releasing peptide receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The gastrin-releasing peptide receptor (GRPR) is a G-protein coupled receptor whose endogenous ligand is gastrin releasing peptide. GRP shares high sequence homology with the neuropeptide neuromedin B in the C-terminal region. This receptor is high glycosylated and couples to a pertussis-toxin-insensitive G protein of the family of Gq/11, which leads to the activation of phospholipase C. Gastrin-releasing peptide (GRP) is a potent mitogen for neoplastic tissues and involved in regulating multiple functions of the gastrointestinal and central nervous systems. These include the release of gastrointestinal hormones, the contraction of smooth muscle cells, and the proliferation of epithelial cells. GRPR belongs to the bombesin subfamily of G-protein coupled receptors, whose members also include neuromedin B receptor (NMBR) and bombesin receptor subtype 3 (BRS-3). Bombesin is a tetradecapeptide, originally isolated from frog skin.


Pssm-ID: 320252 [Multi-domain]  Cd Length: 293  Bit Score: 42.19  E-value: 2.44e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  15 VTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNA 94
Cdd:cd15124   9 IIILIGLIGNITLIKIFCTVKSMRN-VPNLFISSLALGDLLLLVTCAPVDASRYLADEWLFGRVGCKLIPFIQLTSVGVS 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  95 MLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLL------MNWGGYSHTYASCtvhledgsrlA 168
Cdd:cd15124  88 VFTLTALSADRYKAIVRPMDIQASNALMKICLKAALIWILSMLLAIPEAVfsdlhpFYDKSTNKTFVSC----------A 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 169 PYAAFTALFHSSSFLLCLLVLCFAYLKVLRVARSHCKRIDVITVQTLLLLVDIHpsvkercLAQQKKRRQRATKKICIFI 248
Cdd:cd15124 158 PYPHSNELHPKIHSMASFLIFYVIPLSIISVYYYFIAKNLIRSAYNLPVEGNVH-------VRRQIESRKRLAKTVLVFV 230

                ....*....
gi 47220248 249 GSFVLCFSP 257
Cdd:cd15124 231 GLFAFCWLP 239
7tmA_HCAR-like cd14991
hydroxycarboxylic acid receptors and related proteins, member of the class A family of ...
44-307 2.56e-04

hydroxycarboxylic acid receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the hydroxycarboxylic acid receptors (HCARs) as well as their closely related receptors, GPR31 and oxoeicosanoid receptor 1 (OXER1). HCARs are members of the class A family of G-protein coupled receptors (GPCRs). HCAR subfamily contain three receptor subtypes: HCAR1, HCAR2, and HCAR3. The endogenous ligand of HCAR1 (also known as lactate receptor 1, GPR104, or GPR81) is L-lactic acid. The endogenous ligands of HCAR2 (also known as niacin receptor 1, GPR109A, nicotinic acid receptor) and HCAR3 (also known as niacin receptor 2, orGPR109B) are 3-hydroxybutyric acid and 3-hydroxyoctanoic acid, respectively. All three HCA receptors are expressed in adipocytes, and are coupled to G(i)-proteins mediating anti-lipolytic effects in fat cells. OXER1 is a receptor for eicosanoids and polyunsaturated fatty acids such as 5-oxo-6E,8Z,11Z,14Z-eicosatetraenoic acid (5-OXO-ETE), 5(S)-hydroperoxy-6E,8Z,11Z,14Z-eicosatetraenoic acid (5(S)-HPETE) and arachidonic acid, whereas GPR31 is a high-affinity receptor for 12-(S)-hydroxy-5,8,10,14-eicosatetraenoic acid (12-S-HETE).


Pssm-ID: 320122 [Multi-domain]  Cd Length: 280  Bit Score: 42.05  E-value: 2.56e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  44 IFILNLSFSNILLAaINMP--TTFLGVAENGKpFGDPFCQAASFAETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRY 121
Cdd:cd14991  37 VYLFNLVLADFLLL-ICLPfrIDYYLRGEHWI-FGEAWCRVNLFMLSVNRSASIAFLTAVALDRYFKVVHPHHRVNRMSV 114
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 122 RDALLMVAYSWLQSLGFSLTQLLMNWGGYSHTYASCTVHLEDGSRLAPYAAFTALFhsssfllcllvlcfaylkvlrvar 201
Cdd:cd14991 115 KAAAGVAGLLWALVLLLTLPLLLSTLLTVNSNKSSCHSFSSYTKPSLSIRWHNALF------------------------ 170
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 202 shckRIDVITVQTLLL--LVDIHPSVKERCLAQQKKRRQRATKKICIFIGSFVLCFSPYVVTRQLVELIPSVHIPRYWGV 279
Cdd:cd14991 171 ----LLEFFLPLGLIVfcSVRIACNLRIRQSLGKQARVQRAIRLVFLVVIVFVLCFLPSIIAGLLALVFKNLGSCRCLNS 246
                       250       260       270
                ....*....|....*....|....*....|....
gi 47220248 280 TTKC------LTYAKTSTDAFVYCLLRQQYRKVL 307
Cdd:cd14991 247 VAQLfhislaFTYLNSALDPVIYCFSSPWFRNSL 280
7tmA_Relaxin_R cd15137
relaxin family peptide receptors, member of the class A family of seven-transmembrane G ...
8-159 2.69e-04

relaxin family peptide receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes relaxin/insulin-like family peptide receptor 1 (RXFP1 or LGR7) and 2 (RXFP2 or LGR8), which contain a very large extracellular N-terminal domain with numerous leucine-rich repeats responsible for hormone recognition and binding. Relaxin is a member of the insulin superfamily that has diverse actions in both reproductive and non-reproductive tissues. The relaxin-like peptide family includes relaxin-1, relaxin-2, and the insulin-like (INSL) peptides such as INSL3, INSL4, INSL5 and INSL6. The relaxin family peptides share high structural but low sequence similarity, and exert their physiological functions by activating a group of four GPCRs, RXFP1-4. Relaxin and INSL3 are the endogenous ligands for RXFP1 and RXFP2, respectively. Upon receptor binding, relaxin activates a variety of signaling pathways to produce second messengers such as cAMP.


Pssm-ID: 320265 [Multi-domain]  Cd Length: 284  Bit Score: 41.80  E-value: 2.69e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSElRSHVPGIFILNLSFSN-------ILLAAINMptTFLGV----AENGKpfG 76
Cdd:cd15137   2 VLRVFIWVVGIIALLGNLFVLIWRLKYKE-ENKVHSFLIKNLAIADflmgvylLIIASVDL--YYRGVyikhDEEWR--S 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  77 DPFCQAASFAETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRyRDALLMVAYSWLQSLGFSLTQLLmNWGGYSHTYAS 156
Cdd:cd15137  77 SWLCTFAGFLATLSSEVSVLILTLITLDRFICIVFPFSGRRLGL-RRAIIVLACIWLIGLLLAVLPLL-PWDYFGNFYGR 154

                ...
gi 47220248 157 CTV 159
Cdd:cd15137 155 SGV 157
7tmA_NPY1R cd15395
neuropeptide Y receptor type 1, member of the class A family of seven-transmembrane G ...
7-144 2.94e-04

neuropeptide Y receptor type 1, member of the class A family of seven-transmembrane G protein-coupled receptors; NPY is a 36-amino acid peptide neurotransmitter with a C-terminal tyrosine amide residue that is widely distributed in the brain and the autonomic nervous system of many mammalian species. NPY exerts its functions through five, G-protein coupled receptor subtypes including NPY1R, NPY2R, NPY4R, NPY5R, and NPY6R; however, NPY6R is not functional in humans. NYP receptors are also activated by its two other family members, peptide YY (PYY) and pancreatic polypeptide (PP). They typically couple to G(i) or G(o) proteins, which leads to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels, and are involved in diverse physiological roles including appetite regulation, circadian rhythm, and anxiety. When NPY signals through NPY2R in concert with NPY5R, it induces angiogenesis and consequently plays an important role in revascularization and wound healing. On the other hand, when NPY acts through NPY1R and NPYR5, it acts as a vascular mitogen, leading to restenosis and atherosclerosis.


Pssm-ID: 320517 [Multi-domain]  Cd Length: 293  Bit Score: 41.72  E-value: 2.94e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   7 FLLEVCVLVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFA 86
Cdd:cd15395   1 FTLALAYSAVIILGVSGNLALIIIILKQKEMHN-VTNILIVNLSFSDLLMTIMCLPFTFVYTLMDHWVFGEAMCKLNSMV 79
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 47220248  87 ETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYrdALLMVAYSWLQSLGFSLTQLL 144
Cdd:cd15395  80 QCISITVSIFSLVLIAIERHQLIINPRGWRPNNRH--AYVGIAVIWVLAVLTSLPFLI 135
7tmA_PAR cd15162
protease-activated receptors, member of the class A family of seven-transmembrane G ...
8-133 3.02e-04

protease-activated receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes purinergic receptor P2Y8 and protease-activated receptors. P2Y8 (or P2RY8) expression is often increased in leukemia patients, and it plays a role in the pathogenesis of acute leukemia. P2Y8 is phylogenetically closely related to the protease-activated receptors (PARs), which are activated by serine proteases such as thrombin, trypsin, and tryptase. These proteases cleave the extracellular domain of the receptor to form a new N-terminus, which in turn functions as a tethered ligand. The newly-formed tethered ligand binds intramolecularly to activate the receptor and triggers G-protein binding and intracellular signaling. Four different types of the protease-activated receptors have been identified (PAR1-4) and are predominantly expressed in platelets. PAR1, PAR3, and PAR4 are activated by thrombin, whereas PAR2 is activated by trypsin. The PARs are known to couple with several G-proteins including Gi (cAMP inhibitory), G12/13 (Rho and Ras activation), and Gq (calcium signaling) to activate downstream signaling messengers which induces numerous cellular and physiological effects.


Pssm-ID: 341328 [Multi-domain]  Cd Length: 280  Bit Score: 41.66  E-value: 3.02e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCqsSELRSHVPG-IFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFA 86
Cdd:cd15162   2 FLPAVYTLVFVVGLPANGMALWVLL--FRTKKKAPAvIYMANLAIADLLLVIWLPFKIAYHIHGNNWIFGEALCRLVTVA 79
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 47220248  87 ETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWL 133
Cdd:cd15162  80 FYGNMYCSILLLTCISIDRYLAIVHPMGHRRLRARRYALGTCLAIWL 126
7tmA_GnRHR-like cd15195
gonadotropin-releasing hormone and adipokinetic hormone receptors, member of the class A ...
8-260 3.03e-04

gonadotropin-releasing hormone and adipokinetic hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Gonadotropin-releasing hormone (GnRH) and adipokinetic hormone (AKH) receptors share strong sequence homology to each other, suggesting that they have a common evolutionary origin. GnRHR, also known as luteinizing hormone releasing hormone receptor (LHRHR), plays an central role in vertebrate reproductive function; its activation by binding to GnRH leads to the release of follicle stimulating hormone (FSH) and luteinizing hormone (LH) from the pituitary gland. Adipokinetic hormone (AKH) is a lipid-mobilizing hormone that is involved in control of insect metabolism. Generally, AKH behaves as a typical stress hormone by mobilizing lipids, carbohydrates and/or certain amino acids such as proline. Thus, it utilizes the body's energy reserves to fight the immediate stress problems and subdue processes that are less important. Although AKH is known to responsible for regulating the energy metabolism during insect flying, it is also found in insects that have lost its functional wings and predominantly walk for their locomotion. Both GnRH and AKH receptors are members of the class A of the seven-transmembrane, G-protein coupled receptor (GPCR) superfamily.


Pssm-ID: 320323 [Multi-domain]  Cd Length: 293  Bit Score: 42.00  E-value: 3.03e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVL-VTAVVSLLTNLSVLLCYCQSSELRSHVpGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFA 86
Cdd:cd15195   1 LVRVLVTwVLFVISAAGNLTVLIQLFRRRRAKSHI-QILIMHLALADLMVTFFNMPMDAVWNYTVEWLAGDLMCRVMMFL 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  87 ETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAysWLQSLGFSLTQLLM-----NWGGYSHTYASCTVH- 160
Cdd:cd15195  80 KQFGMYLSSFMLVVIALDRVFAILSPLSANQARKRVKIMLTVA--WVLSALCSIPQSFIfsvlrKMPEQPGFHQCVDFGs 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 161 LEDGSRLAPYAAFTALfhsSSFLLCLLVLCFAYLKVLrvarshcKRIDVITVQTLLLLVDIHPSVKERCLAQQKKRRQRA 240
Cdd:cd15195 158 APTKKQERLYYFFTMI---LSFVIPLIITVTCYLLIL-------FEISKMAKRARDTPISNRRRSRTNSLERARMRTLRM 227
                       250       260
                ....*....|....*....|
gi 47220248 241 TKKICIfigSFVLCFSPYVV 260
Cdd:cd15195 228 TALIVL---TFIVCWGPYYV 244
7tmA_OR3A-like cd15233
olfactory receptor subfamily 3A3 and related proteins, member of the class A family of ...
7-142 3.15e-04

olfactory receptor subfamily 3A3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 3A3 and 3A4, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320361 [Multi-domain]  Cd Length: 277  Bit Score: 41.70  E-value: 3.15e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   7 FLLEVCVLVTAVVSLLTNLSVLLCYCQSSELrsHVPGIFIL-NLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASF 85
Cdd:cd15233   1 PVLFVTFLLAYIVTIGGNLSILAAILLEPKL--HTPMYFFLgNLSLLDIGCISVTVPQMLVHLLSHKRTISYAACLSQLF 78
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 47220248  86 AETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQ 142
Cdd:cd15233  79 FFHLLAGADCFLLTAMAYDRYLAICQPLTYSVRMSWRVQTALVGISCACAFTNALTH 135
7tmA_PGI2 cd15141
prostaglandin I2 receptor, member of the class A family of seven-transmembrane G ...
13-144 3.19e-04

prostaglandin I2 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin I2 receptor (also called prostacyclin receptor or prostanoid IP receptor) is a class A, G protein-coupled receptor whose endogenous ligand is prostacyclin, which is the major product of cyclooxygenase metabolite of arachidonic acid that found predominantly in platelets and vascular smooth muscle cells (VSMCs). The PGI2 receptor is coupled to both G(s) and G(q) protein subtypes, resulting in increased cAMP formation, phosphoinositide turnover, and Ca2+ signaling. PGI2 receptor activation by prostacyclin induces VSMC differentiation and produces a potent vasodilation and inhibition of platelet aggregation.


Pssm-ID: 320269 [Multi-domain]  Cd Length: 301  Bit Score: 41.73  E-value: 3.19e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  13 VLVTAVVSLLTNLSVLLCYCQSSELRSHVPGIFILNLSFSNILLAAINMPTTFLGVAEN----GKPFGDPFCQAASFAET 88
Cdd:cd15141  10 MFAAGVVGNLLALGILGVHRKERRTKSSAFCVLVTGLAATDLLGTCFLSPMVFVSYAQNssllGLAAGQPLCHLFAFAMT 89
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 47220248  89 FLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLL 144
Cdd:cd15141  90 FFGLASMLILFAMAVERCLAISHPYFYAQHSGRRLAKLALPAIYAFGALFCALPLL 145
7tmA_Proton-sensing_R cd15160
proton-sensing G protein-coupled receptors, member of the class A family of ...
8-304 3.44e-04

proton-sensing G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Proton/pH-sensing G-protein coupled receptors sense pH of 7.6 to 6.0. They mediate a variety of biological activities in neutral and mildly acidic pH conditions, whereas the acid-sensing ionotropic ion channels typically sense strong acidic pH. The proton/pH-sensing receptor family includes the G2 accumulation receptor (G2A, also known as GPR132), the T cell death associated gene-8 (TDAG8, GPR65) receptor, ovarian cancer G-protein receptor 1 (OGR-1, GPR68), and G-protein-coupled receptor 4 (GPR4).


Pssm-ID: 320288 [Multi-domain]  Cd Length: 280  Bit Score: 41.60  E-value: 3.44e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLsVLLCYCQSSELRSHVPGIFILNLSFSNiLLAAINMPTTFLGVA-ENGKPFGDPFCQAAS-- 84
Cdd:cd15160   2 FLPVVYSFVFVVGLPANC-LALWVLYLQIKKENVLGVYLLNLSLSD-LLYILTLPLWIDYTAnHHNWTFGPLSCKVVGff 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  85 FAETFLTTNAMLSMaaLSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFS---LTQLLMNWGGYSHTYasCTVHL 161
Cdd:cd15160  80 FYTNIYASIGFLCC--IAVDRYLAVVHPLRFRGLRTRRFALKVSASIWVLELGTHsvfLGHDELFRDEPNHTL--CYEKY 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 162 EDGSRLAPYAAFTALfhsSSFLLCLLVLCFAYLKVLRVARshckridvitvqtllllvdihpsvkeRCLAQQKKRRQRAT 241
Cdd:cd15160 156 PMEGWQASYNYARFL---VGFLIPLSLILFFYRRVLRAVR--------------------------QSPSLEREEKRKII 206
                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47220248 242 KKICIFIGSFVLCFSPYVVT---RQLVELIPSVH-------IPRYwgVTTKCLTYAKTSTDAFVYCLLRQQYR 304
Cdd:cd15160 207 GLLLSIVVIFLLCFLPYHVVllvRSVIELVQNGLcgfekrvFTAY--QISLCLTSLNCVADPILYIFVTEDVR 277
7tmA_mAChR_M5 cd15300
muscarinic acetylcholine receptor subtype M5, member of the class A family of ...
15-136 3.56e-04

muscarinic acetylcholine receptor subtype M5, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. M5 mAChR is primarily found in the central nervous system and mediates acetylcholine-induced dilation of cerebral blood vessels. Activation of M5 receptor triggers a variety of cellular responses, including inhibition of adenylate cyclase, breakdown of phosphoinositides, and modulation of potassium channels. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320427 [Multi-domain]  Cd Length: 262  Bit Score: 41.55  E-value: 3.56e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  15 VTAVVSLLT---NLSVLLCYCQSSELRShVPGIFILNLSFSNILLA--AINMPTTFLGVAENGkpFGDPFCQAASFAETF 89
Cdd:cd15300   6 VTAVVSLITivgNVLVMISFKVNSQLKT-VNNYYLLSLACADLIIGifSMNLYTSYILMGYWA--LGSLACDLWLALDYV 82
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 47220248  90 LTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSL 136
Cdd:cd15300  83 ASNASVMNLLVISFDRYFSITRPLTYRAKRTPKRAGIMIGLAWLISF 129
7tmA_alpha-2D_AR cd15324
alpha-2 adrenergic receptors subtype D, member of the class A family of seven-transmembrane G ...
8-145 3.80e-04

alpha-2 adrenergic receptors subtype D, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback.


Pssm-ID: 320447 [Multi-domain]  Cd Length: 256  Bit Score: 41.39  E-value: 3.80e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRSHvPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAE 87
Cdd:cd15324   2 LIVLVVVVIILVTIVGNVLVVVAVFTSRALRAP-QNLFLVSLASADILVATLVIPFSLANEVMGYWYFGSTWCAFYLALD 80
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLM 145
Cdd:cd15324  81 VLFCTSSIVHLCAISLDRYWSVTKAVSYNLKRTPKRIKRMIAVVWVISAVISFPPLLM 138
7tmA_AstC_insect cd15094
somatostatin-like receptor for allatostatin C, member of the class A family of ...
18-305 3.83e-04

somatostatin-like receptor for allatostatin C, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled somatostatin receptors (SSTRs) are composed of five distinct subtypes (SSTR1-5) that display strong sequence similarity with opioid receptors. All five receptor subtypes bind the natural somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. In Drosophila melanogaster and other insects, a 15-amino-acid peptide named allatostatin C(AstC) binds the somatostatin-like receptors. Two AstC receptors have been identified in Drosophila with strong sequence homology to human somatostatin and opioid receptors.


Pssm-ID: 320222 [Multi-domain]  Cd Length: 282  Bit Score: 41.31  E-value: 3.83e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  18 VVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNiLLAAINMPTTFLGVAENGKPFGDPFCQA--ASFAETFLTTNAM 95
Cdd:cd15094  12 IVGLVGNGLVIYVVLRYAKMKT-VTNLYILNLAVAD-ECFLIGLPFLIVTMILKYWPFGAAMCKIymVLTSINQFTSSFT 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  96 LSmaALSVDRWIAVVFPLsysSKMRYRD---ALLMVAYSWLQSLGFSLTQLLmnwggYSHTYA-----SCTVHLEDGSRL 167
Cdd:cd15094  90 LT--VMSADRYLAVCHPI---RSMRYRTpfiAKVVCATTWSISFLVMLPIIL-----YASTVPdsgrySCTIVWPDSSAV 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 168 APYAAFTalfhsssfllcllvlcfAYLKVLRVARShCKRIDVITVQTLLLLVDIHPSVKERclaQQKKRRQRATKKICIF 247
Cdd:cd15094 160 NGQKAFT-----------------LYTFLLGFAIP-LLLISVFYTLVILRLRTVGPKNKSK---EKRRSHRKVTRLVLTV 218
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47220248 248 IGSFVLCFSPYVVTR-QLVELIPSVHIPRYWGVTTK---CLTYAKTSTDAFVYCLLRQQYRK 305
Cdd:cd15094 219 ISVYIICWLPYWAFQvHLIFLPPGTDMPKWEILMFLlltVLSYANSMVNPLLYAFLSENFRK 280
7tmA_SSTR5 cd15974
somatostatin receptor type 5, member of the class A family of seven-transmembrane G ...
7-305 3.89e-04

somatostatin receptor type 5, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled somatostatin receptors (SSTRs) are composed of five distinct subtypes (SSTR1-5) that display strong sequence similarity with opioid receptors. All five receptor subtypes bind the natural somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. SSTR5 is coupled to inward rectifying K channels and phospholipase C, and plays critical roles in growth hormone and insulin secretion. SSTR5 acts as a negative regulator of PDX-1 (pancreatic and duodenal homeobox-1) expression, which is a conserved homeodomain-containing beta cell-specific transcription factor essentially involved in pancreatic development, among many other functions.


Pssm-ID: 320640 [Multi-domain]  Cd Length: 277  Bit Score: 41.33  E-value: 3.89e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   7 FLLEVCVLVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAaINMPTTFLGVAENGKPFGDPFCQAASFA 86
Cdd:cd15974   1 VLIPVIYLLVCAIGLSGNTLVIYVVLRYAKMKT-VTNIYILNLAVADELFM-LGLPFLATQNAISYWPFGSFLCRLVMTV 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  87 ETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWlqSLGFSLTQLLMNWGGYSHTYASCTVHLEDgsr 166
Cdd:cd15974  79 DGVNQFTSIFCLTVMSIDRYLAVVHPIKSTKWRRPRVAKLINATVW--TLSFLVVLPVIIFSDVQPDLNTCNISWPE--- 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 167 laPYAAFTALFhsssfllcllvlcFAYLKVLrvarSHCKRIDVITVQTLLLLVDIHPSVKERCLAQQKKRRQRATKKICI 246
Cdd:cd15974 154 --PVSVWSTAF-------------IIYTAVL----GFFGPLLVICLCYLLIVIKVKSSGLRVGSTKRRKSERKVTRMVVI 214
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 47220248 247 FIGSFVLCFSPYVVTR--QLVELIPSVHIPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYRK 305
Cdd:cd15974 215 IVVVFVFCWLPFYMLNivNLIVILPEEPAFVGVYFFVVVLSYANSCANPILYGFLSDNFKQ 275
7tmA_GHSR cd15131
growth hormone secretagogue receptor, member of the class A family of seven-transmembrane G ...
12-136 4.02e-04

growth hormone secretagogue receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Growth hormone secretagogue receptor, GHSR, is also known as GH-releasing peptide receptor (GHRP) or Ghrelin receptor. Ghrelin, the endogenous ligand for GHSR, is an acylated 28-amino acid peptide hormone produced by ghrelin cells in the gastrointestinal tract. Ghrelin, also called hunger hormone, is involved in the regulation of growth hormone release, appetite and feeding, gut motility, lipid and glucose metabolism, and energy balance. It also plays a role in the cardiovascular, immune, and reproductive systems. GHSR couples to G-alpha-11 proteins. Both ghrelin and GHSR are expressed in a wide range of cancer tissues. Recent studies suggested that ghrelin may play a role in processes associated with cancer progression, including cell proliferation, metastasis, apoptosis, and angiogenesis.


Pssm-ID: 320259 [Multi-domain]  Cd Length: 291  Bit Score: 41.41  E-value: 4.02e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  12 CVLVTaVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLT 91
Cdd:cd15131   7 CVLLF-VVGVTGNLMTMLVVSKYRDMRT-TTNLYLSSMAFSDLLIFLCMPLDLYRLWQYRPWNFGDLLCKLFQFVSESCT 84
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*
gi 47220248  92 TNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSL 136
Cdd:cd15131  85 YSTILNITALSVERYFAICFPLRAKVVVTKRRVKLVILVLWAVSF 129
7tmA_OR5AK3-like cd15408
olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of ...
8-133 4.22e-04

olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AK3, 5AU1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320530  Cd Length: 287  Bit Score: 41.15  E-value: 4.22e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELrsHVPGIFIL-NLSFSNILLAAINMPTTFLGVAENGK--PFGDPFCQAAS 84
Cdd:cd15408  15 LLFVVFLLIYVITLVGNLGMILLIRLDSRL--HTPMYFFLsHLSFLDICYSSTITPKTLLNLLAERKviSFTGCLTQLYF 92
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 47220248  85 FAeTFLTTNAMLsMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWL 133
Cdd:cd15408  93 YA-VFATTECYL-LAAMAYDRYVAICNPLLYTVIMSQRVCVSLVAGSYL 139
7tmA_5-HT2C cd15305
serotonin receptor subtype 2C, member of the class A family of seven-transmembrane G ...
13-140 4.27e-04

serotonin receptor subtype 2C, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341346 [Multi-domain]  Cd Length: 275  Bit Score: 41.43  E-value: 4.27e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  13 VLVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVA-ENGKPFGDPFCQAASFAETFLT 91
Cdd:cd15305   7 ILIIIILTIGGNILVIMAVSLEKKLQN-ATNFFLMSLAVADMLVGILVMPVSLIAILyDYAWPLPRYLCPIWISLDVLFS 85
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 47220248  92 TNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSL 140
Cdd:cd15305  86 TASIMHLCAISLDRYVAIRNPIEHSRFNSRTKAMMKIAAVWTISIGISM 134
7tmA_NPY4R cd15397
neuropeptide Y receptor type 4, member of the class A family of seven-transmembrane G ...
7-146 4.36e-04

neuropeptide Y receptor type 4, member of the class A family of seven-transmembrane G protein-coupled receptors; NPY is a 36-amino acid peptide neurotransmitter with a C-terminal tyrosine amide residue that is widely distributed in the brain and the autonomic nervous system of many mammalian species. NPY exerts its functions through five, G-protein coupled receptor subtypes including NPY1R, NPY2R, NPY4R, NPY5R, and NPY6R; however, NPY6R is not functional in humans. NYP receptors are also activated by its two other family members, peptide YY (PYY) and pancreatic polypeptide (PP). They typically couple to G(i) or G(o) proteins, which leads to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels, and are involved in diverse physiological roles including appetite regulation, circadian rhythm, and anxiety.


Pssm-ID: 320519 [Multi-domain]  Cd Length: 293  Bit Score: 41.26  E-value: 4.36e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   7 FLLEVCVLVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFA 86
Cdd:cd15397   1 VFLVVSYSLVMAVGLLGNICLICVIARQKEKTN-VTNILIANLSFSDILVCLVCLPFTVVYTLMDYWIFGEVLCKMTPFI 79
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47220248  87 ETFLTTNAMLSMAALSVDRWIAVVFPLSYssKMRYRDALLMVAYSW----LQSLGFSLTQLLMN 146
Cdd:cd15397  80 QCMSVTVSILSLVLIALERHQLIINPTGW--KPSVSQAYLAVVVIWmlacFISLPFLAFHILTD 141
7tmA_alpha2B_AR cd15321
alpha-2 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G ...
18-305 4.71e-04

alpha-2 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback.


Pssm-ID: 320444 [Multi-domain]  Cd Length: 268  Bit Score: 41.06  E-value: 4.71e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  18 VVSLLTNLSVLLCYCQSSELRSHvPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNAMLS 97
Cdd:cd15321  18 LFTIFGNVLVIIAVLTSRSLRAP-QNLFLVSLAAADILVATLIIPFSLANELMGYWYFRKTWCEIYLALDVLFCTSSIVH 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  98 MAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGYSHTYASCTVHLEDGSRLAPYAAFTALF 177
Cdd:cd15321  97 LCAISLDRYWSVSRAIEYNSKRTPRRIKCIILIVWLIAAVISLPPLIYKGKQKDEQGGLPQCKLNEEAWYILSSSIGSFF 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 178 hsssflLCLLVLCFAYLKVLRVArshckridvitvqtllllvdihpsvkerclaqqKKRRQRATKKICIFIGSFVLCFSP 257
Cdd:cd15321 177 ------APCLIMILVYLRIYLIA---------------------------------KNREKRFTFVLAVVIGVFVLCWFP 217
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*
gi 47220248 258 YVVTRQLVELIP-SVHIPR------YWgvttkcLTYAKTSTDAFVYCLLRQQYRK 305
Cdd:cd15321 218 FFFSYSLGAICPeLCKVPHslfqffFW------IGYCNSSLNPVIYTIFNQDFRR 266
7tmA_CCR10 cd15177
CC chemokine receptor type 10, member of the class A family of seven-transmembrane G ...
14-144 4.84e-04

CC chemokine receptor type 10, member of the class A family of seven-transmembrane G protein-coupled receptors; CCR10 is a homeostatic receptor specific for two C-C motif chemokines, CCL27 and CCL28. Activation of CCR10 by its two ligands mediates diverse activities, ranging from leukocyte trafficking to skin cancer. Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling. Currently, there are ten known receptors for CC chemokines, seven for CXC chemokines, and single receptors for the XC and CX3C chemokines. The CC chemokine receptors are all activating the G protein Gi.


Pssm-ID: 341332 [Multi-domain]  Cd Length: 280  Bit Score: 41.30  E-value: 4.84e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  14 LVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAaINMPTTFLGVAEnGKPFGDPFCQAASFAETFLTTN 93
Cdd:cd15177   8 LVVFVLGLVGNGLVLATHTRYRRLRS-MTDVYLLNLALADLLLL-LTLPFAAAETLQ-GWIFGNAMCKLIQGLYAINFYS 84
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....
gi 47220248  94 AMLSMAALSVDRWIAVVFPLS---YSSKMRYRdALLMVAYSWLQSLGFSLTQLL 144
Cdd:cd15177  85 GFLFLTCISVDRYVVIVRATSahrLRPKTLFY-SVLTSLIVWLLSILFALPQLI 137
7tmA_OR2W-like cd15434
olfactory receptor subfamily 2W and related proteins, member of the class A family of ...
8-140 5.04e-04

olfactory receptor subfamily 2W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2W and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320551 [Multi-domain]  Cd Length: 277  Bit Score: 41.21  E-value: 5.04e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELrsHVPGIFIL-NLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFA 86
Cdd:cd15434   2 ILSVVVLIFYLLTLVGNTTIILVSCLDSRL--HTPMYFFLaNLSFLDLCFTTSIIPQMLVNLWGPDKTISYVGCAIQLFI 79
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....
gi 47220248  87 ETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSL 140
Cdd:cd15434  80 ALGLGGTECVLLAVMAYDRYAAVCQPLHYTVVMHPRLCWKLVAMSWLIGFGNSL 133
7tmA_OR4E-like cd15940
olfactory receptor 4E and related proteins, member of the class A family of ...
14-142 5.53e-04

olfactory receptor 4E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4E and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320606 [Multi-domain]  Cd Length: 267  Bit Score: 40.89  E-value: 5.53e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  14 LVTAVVSLLTNLSVLLCYCQSSELrsHVPGIFIL-NLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTT 92
Cdd:cd15940   8 LVLYLLTLSGNILIMITIVMDPRL--HTPMYFFLsNLSFIDICHSSVTVPKMLSDLLSEEKTISFNGCVTQLFFLHLFAC 85
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|
gi 47220248  93 NAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQ 142
Cdd:cd15940  86 TEIFLLTIMAYDRYVAICNPLHYPTVMNHKVCLWLVAALWLGGTVHSLAQ 135
7tmA_TSH-R cd15964
thyroid-stimulating hormone receptor (or thyrotropin receptor), member of the class A family ...
8-144 5.91e-04

thyroid-stimulating hormone receptor (or thyrotropin receptor), member of the class A family of seven-transmembrane G protein-coupled receptors; The glycoprotein hormone receptors are seven transmembrane domain receptors with a very large extracellular N-terminal domain containing many leucine-rich repeats responsible for hormone recognition and binding. The glycoprotein hormone family includes the three gonadotropins: luteinizing hormone (LH), follicle-stimulating hormone (FSH), chorionic gonadotropin (CG), and a pituitary thyroid-stimulating hormone (TSH). The glycoprotein hormones exert their biological functions by interacting with their cognate GPCRs. Both LH and CG bind to the same receptor, the luteinizing hormone-choriogonadotropin receptor (LHCGR); FSH binds to FSH-R and TSH to TSH-R. TSH-R plays an important role thyroid physiology, and its activation stimulates the production of thyroxine (T4) and triiodothyronine (T3). Defects in TSH-R are a cause of several types of hyperthyroidism. The receptor is predominantly found on the surface of the thyroid epithelial cells and couples to the G(s)-protein and activates adenylate cyclase, thereby promoting cAMP production. TSH and cAMP stimulate thyroid cell proliferation, differentiation, and function.


Pssm-ID: 320630 [Multi-domain]  Cd Length: 275  Bit Score: 41.04  E-value: 5.91e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCqSSELRSHVPGIFILNLSFSN-------ILLAAINMPT--TFLGVAENGKPfgDP 78
Cdd:cd15964   2 FLRIVVWFVNLLAILGNVFVLLILL-TSHYKLTVPRFLMCNLAFADfcmgiylLLIASVDLHTrsEYYNHAIDWQT--GP 78
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 47220248  79 FCQAASFAETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLL 144
Cdd:cd15964  79 GCNTAGFFTVFASELSVYTLTVITLERWYAITFAMRLDRKIRLRHASAIMLGGWVFCFLLALLPLV 144
7tmA_GPR88-like cd15211
G protein-coupled receptor 88, member of the class A family of seven-transmembrane G ...
15-215 5.92e-04

G protein-coupled receptor 88, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR88, an orphan G protein-coupled receptor, is predominantly and almost exclusively expressed within medium spiny neurons (MSNs) of the brain's striatum in both human and rodents; thus it is also called Striatum-specific GPCR (STRG). The striatum is known to involve in motor coordination, reward-based decision making, and response learning. GPR88 is shown to co-localize with both dopamine D1 and D2 receptors and displays the highest sequence similarity to receptors for biogenic amines such as dopamine and serotonin. GPR88 knockout mice showed abnormal behaviors observed in schizophrenia, such as disrupted sensorimotor gating, increased stereotypic behavior and locomotor activity in response to treatment with dopaminergic compounds such as apomorphine and amphetamine, respectively, suggesting a role for GPR88 in dopaminergic signaling. Furthermore, the transcriptional profiling studies showed that GPR88 expression is altered in a number of psychiatric disorders such as depression, drug addiction, bipolar and schizophrenia, providing further evidence that GPR88 plays an important role in CNS signaling pathways related to psychiatric disorder. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320339 [Multi-domain]  Cd Length: 283  Bit Score: 40.99  E-value: 5.92e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  15 VTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMP----TTFLGVAENGKpfgdpfCQAASFAETFL 90
Cdd:cd15211   8 FLAVSGTLANVLVIYLVVSFKKLQT-TSNAFIVNGCVADLLVCAFWMPqeavLGSTGTLLVLG------YRLFREGLLFL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  91 -TTNAMLSMAALSVDRWIAVV-FPLSYSSKMRYRDALLMVAYSWLQSLGFSLtqLLMNWGGYSHTYASCTVHLEDGSRLA 168
Cdd:cd15211  81 gLTVSLLSHSLIALNRYVLITkLPAVYQALYQKRNTEWMIALSWALALGLLL--PWLTSFRYPTKSCHDSADGSFAVVSV 158
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*..
gi 47220248 169 PYAAFTALFHSSSFLLCLLVLCFAYLKVLRVARSHCKRIDVITVQTL 215
Cdd:cd15211 159 LSSRYPALLLAFTVLGQTALVLHCYFGIFRRVQISVKRVSVLNFQIV 205
7tmA_SWS2_opsin cd15077
short wave-sensitive 2 opsins, member of the class A family of seven-transmembrane G ...
24-150 7.45e-04

short wave-sensitive 2 opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Short Wave-Sensitive opsin 2 (SWS2), which mediates visual transduction in response to light at short wavelengths (violet to blue). Vertebrate cone opsins are expressed in cone photoreceptor cells of the retina and involved in mediating photopic vision, which allows color perception. The cone opsins can be classified into four classes according to their peak absorption wavelengths: SWS1 (ultraviolet sensitive), SWS2 (short wave-sensitive), MWS/LWS (medium/long wave-sensitive), and RH2 (medium wave-sensitive, rhodopsin-like opsins). Members of this group belong to the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320205 [Multi-domain]  Cd Length: 280  Bit Score: 40.58  E-value: 7.45e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  24 NLSVLLCYCQSSELRSHVPGIFIlNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNAMLSMAALSV 103
Cdd:cd15077  18 NVLTIICTIKYKKLRSHLNYILV-NLAVANLIVVCFGSTTAFYSFSQMYFVLGPLACKIEGFTATLGGMVSLWSLAVVAF 96
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 47220248 104 DRWIAVVFPLSYSSkMRYRDALLMVAYSWLQSLGFSLTQLLmNWGGY 150
Cdd:cd15077  97 ERFLVICKPLGNFT-FRGTHAIIGCIATWVFGLAASLPPLF-GWSRY 141
7tmA_AKHR cd15382
adipokinetic hormone receptor, member of the class A family of seven-transmembrane G ...
12-142 7.60e-04

adipokinetic hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Adipokinetic hormone (AKH) is a lipid-mobilizing hormone that is involved in control of insect metabolism. Generally, AKH behaves as a typical stress hormone by mobilizing lipids, carbohydrates and/or certain amino acids such as proline. Thus, it utilizes the body's energy reserves to fight the immediate stress problems and subdue processes that are less important. Although AKH is known to responsible for regulating the energy metabolism during insect flight, it is also found in insects that have lost its functional wings and predominantly walk for their locomotion. AKH is structurally related to the mammalian gonadotropin-releasing hormone (GnRH) and they share a common ancestor. Both GnRH and AKH receptors are members of the class A of the seven-transmembrane, G-protein coupled receptor (GPCR) superfamily.


Pssm-ID: 320504 [Multi-domain]  Cd Length: 298  Bit Score: 40.76  E-value: 7.60e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  12 CVLVTAVVSLLTNLSVLLCYCQSSELRSHVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLT 91
Cdd:cd15382   6 VYSVLFLIAAVGNLTVLLILLRNRRRKRSRVNILLMHLAIADLLVTFIMMPLEIGWAATVAWLAGDFLCRLMLFFRAFGL 85
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|.
gi 47220248  92 TNAMLSMAALSVDRWIAVVFPLsYSSKMRYRDAlLMVAYSWLQSLGFSLTQ 142
Cdd:cd15382  86 YLSSFVLVCISLDRYFAILKPL-RLSDARRRGR-IMLAVAWVISFLCSIPQ 134
7tmA_OR10D-like cd15228
olfactory receptor subfamily 10D and related proteins, member of the class A family of ...
8-135 7.79e-04

olfactory receptor subfamily 10D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320356 [Multi-domain]  Cd Length: 275  Bit Score: 40.49  E-value: 7.79e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELrsHVPGIFIL-NLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFA 86
Cdd:cd15228   2 ILFVLFLAFYLCTLLGNLLILSAILSDPRL--HTPMYFFLcNLSVFDIGFSSVSTPKMLAYLWGQSRVISLGGCMSQVFF 79
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 47220248  87 ETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQS 135
Cdd:cd15228  80 YHFLGSTECLLYTVMAYDRYVAICHPLRYLLIMNRRVCALLAAGTWITS 128
7tmA_SSTR cd15093
somatostatin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
4-305 8.49e-04

somatostatin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled somatostatin receptors (SSTRs) are composed of five distinct subtypes (SSTR1-5) that display strong sequence similarity with opioid receptors. All five receptor subtypes bind the natural somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. They share common signaling cascades such as inhibition of adenylyl cyclase, activation of phosphotyrosine phosphatase activity, and G-protein-dependent regulation of MAPKs.


Pssm-ID: 320221 [Multi-domain]  Cd Length: 280  Bit Score: 40.52  E-value: 8.49e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   4 IPEFLLEVCVlvtavVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAaINMPTTFLGVAENGKPFGDPFCQAA 83
Cdd:cd15093   3 IPCIYAVVCL-----VGLCGNSLVIYVVLRYAKMKT-VTNIYILNLAIADELFM-LGLPFLAASNALRHWPFGSVLCRLV 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  84 SFAETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSL-----TQLLMNWGGYShtyaSCT 158
Cdd:cd15093  76 LSVDGINMFTSIFCLTVMSVDRYLAVVHPIKSARWRRPRVAKVVNLAVWVASLLVILpvvvfAGTRENQDGSS----ACN 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 159 VHLEDgsrlaPYAAFTALFhsssfllcllvlcFAYLKVLrvarSHCKRIDVITVQTLLLLVDIHPSVKERCLAQQKKRRQ 238
Cdd:cd15093 152 MQWPE-----PAAAWSAGF-------------IIYTFVL----GFLLPLLIICLCYLLIVIKVKSAGLRAGWQQRKRSER 209
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 47220248 239 RATKKICIFIGSFVLCFSPYVVTRQLVELIPSVHIPRYWGVT--TKCLTYAKTSTDAFVYCLLRQQYRK 305
Cdd:cd15093 210 KVTRMVVMVVVVFVICWLPFYVLQLVNVFVQLPETPALVGVYhfVVILSYANSCANPILYGFLSDNFKK 278
7tmA_OR1_7-like cd15918
olfactory receptor families 1, 7, and related proteins, member of the class A family of ...
8-145 9.13e-04

olfactory receptor families 1, 7, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 1 and 7, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320584 [Multi-domain]  Cd Length: 270  Bit Score: 40.29  E-value: 9.13e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELrsHVPGIFIL-NLSFSNILLAAINMPTTFLGVAENGK--PFGDPFCQAaS 84
Cdd:cd15918   2 LLFGLFLGMYLVTVLGNLLIILAIGSDSHL--HTPMYFFLaNLSLVDICFTSTTVPKMLVNIQTQSKsiSYAGCLTQM-Y 78
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 47220248  85 FAETFLTTNAMLsMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLM 145
Cdd:cd15918  79 FFLLFGDLDNFL-LAVMAYDRYVAICHPLHYTTIMSPRLCILLVAASWVITNLHSLLHTLL 138
7tmA_NPSR cd15197
neuropeptide S receptor, member of the class A family of seven-transmembrane G protein-coupled ...
14-298 1.15e-03

neuropeptide S receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR is widely expressed in the brain, and its activation induces an elevation of intracellular calcium and cAMP concentrations, presumably by coupling to G(s) and G(q) proteins. Mutations in NPSR have been associated with an increased susceptibility to asthma. NPSR was originally identified as an orphan receptor GPR154 and is also known as G protein receptor for asthma susceptibility (GPRA) or vasopressin receptor-related receptor 1 (VRR1).


Pssm-ID: 320325 [Multi-domain]  Cd Length: 294  Bit Score: 40.10  E-value: 1.15e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  14 LVTAVVSLLTNLSVLLCYCQSSElRSHVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTN 93
Cdd:cd15197   8 WVLFVFIVVGNSSVLFALWMRKA-KKSRMNFFITQLAIADLCVGLINVLTDIIWRITVEWRAGDFACKVIRYLQVVVTYA 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  94 AMLSMAALSVDRWIAVVFPLSYSSKmrYRDALLMVAYSWLQSLGFSLTQL-LMNWGGYSHTYASCTVHLEDGSRLAPY-- 170
Cdd:cd15197  87 STYVLVALSIDRYDAICHPMNFSQS--GRQARVLICVAWILSALFSIPMLiIFEKTGLSNGEVQCWILWPEPWYWKVYmt 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 171 -AAFTALFhsssfllcllvlcfayLKVLRVARSHckridVITVQTLLLLVDIHPSVKERCLAQQKKRRQ----------- 238
Cdd:cd15197 165 iVAFLVFF----------------IPATIISICY-----IIIVRTIWKKSKIQVTINKAGLHDGSSRRSssrgiipraki 223
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47220248 239 RATKKICIFIGSFVLCFSPYVVTRQLV--ELIPSVHIPRYWGVTTKCLTYAKTSTDAFVYCL 298
Cdd:cd15197 224 KTIKMTFVIVTVFIICWSPYFVFDLLDvfGLLPRSKTKIAAATFIQSLAPLNSAINPLIYCL 285
7tmA_GnRHR_vertebrate cd15383
vertebrate gonadotropin-releasing hormone receptors, member of the class A family of ...
11-143 1.26e-03

vertebrate gonadotropin-releasing hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; GnRHR, also known as luteinizing hormone releasing hormone receptor (LHRHR), plays an central role in vertebrate reproductive function; its activation by binding to GnRH leads to the release of follicle stimulating hormone (FSH) and luteinizing hormone (LH) from the pituitary gland. GnRHR is expressed predominantly in the gonadotrope membrane of the anterior pituitary as well as found in numerous extrapituitary tissues including lymphocytes, breast, ovary, prostate, and cancer cell lines. There are at least two types of GnRH receptors, GnRHR1 and GnRHR2, which couple primarily to G proteins of the Gq/11 family. GnRHR is closely related to the adipokinetic hormone receptor (AKH), which binds to a lipid-mobilizing hormone that is involved in control of insect metabolism. They share a common ancestor and are members of the class A of the seven-transmembrane, G-protein coupled receptor (GPCR) superfamily.


Pssm-ID: 320505 [Multi-domain]  Cd Length: 295  Bit Score: 40.04  E-value: 1.26e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  11 VCV-LVTAVVSLLTNLSVLLCYCQSSELR-SHVpGIFILNLSFSNILLAAINMPttfLGVAEN---GKPFGDPFCQAASF 85
Cdd:cd15383   4 VAVtFVLFVLSACSNLAVLWSATRNRRRKlSHV-RILILHLAAADLLVTFVVMP---LDAAWNvtvQWYAGDLACRLLMF 79
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 47220248  86 AETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAysWLQSLGFSLTQL 143
Cdd:cd15383  80 LKLFAMYSSAFVTVVISLDRHAAILNPLAIGSARRRNRIMLCAA--WGLSALLALPQL 135
7tmA_GPR151 cd15002
G protein-coupled receptor 151, member of the class A family of seven-transmembrane G ...
46-144 1.27e-03

G protein-coupled receptor 151, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein coupled receptor 151 (GRP151) is an orphan receptor of unknown function. Its expression is conserved in habenular axonal projections of vertebrates and may be a promising novel target for psychiatric drug development. GPR151 shows high sequence similarity with galanin receptors (GALR). GPR151 is a member of the class A rhodopsin-like GPCRs, which represent a widespread protein family that includes the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320133 [Multi-domain]  Cd Length: 280  Bit Score: 39.70  E-value: 1.27e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  46 ILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNAMLSMAALSVDRWIAVVFPlSYSSKMRYRDAL 125
Cdd:cd15002  40 ILNLSAADLLLLLFSVPFRAAAYSKGSWPLGWFVCKTADWFGHACMAAKSFTIAVLAKACYMYVVNP-TKQVTIKQRRIT 118
                        90
                ....*....|....*....
gi 47220248 126 LMVAYSWLQSLGFSLTQLL 144
Cdd:cd15002 119 AVVASIWVPACLLPLPQWL 137
7tmA_GHSR-like cd15928
growth hormone secretagogue receptor, motilin receptor, and related proteins, member of the ...
74-136 1.34e-03

growth hormone secretagogue receptor, motilin receptor, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes growth hormone secretagogue receptor (GHSR or ghrelin receptor), motilin receptor (also called GPR38), and related proteins. Both GHSR and GPR38 bind peptide hormones. Ghrelin, the endogenous ligand for GHSR, is an acylated 28-amino acid peptide hormone produced by ghrelin cells in the gastrointestinal tract. Ghrelin is also called the hunger hormone and is involved in the regulation of growth hormone release, appetite and feeding, gut motility, lipid and glucose metabolism, and energy balance. Motilin, the ligand for GPR38, is a 22 amino acid peptide hormone expressed throughout the gastrointestinal tract and stimulates contraction of gut smooth muscle. It is involved in the regulation of digestive tract motility.


Pssm-ID: 320594 [Multi-domain]  Cd Length: 288  Bit Score: 39.78  E-value: 1.34e-03
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47220248  74 PFGDPFCQAASFAETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSL 136
Cdd:cd15928  67 RFGDLLCRLMYFFSETCTYASILHITALSVERYLAICHPLRAKVLVTRGRVKLLIAVIWAVAI 129
7tmA_OR7-like cd15234
olfactory receptor family 7 and related proteins, member of the class A family of ...
19-145 1.36e-03

olfactory receptor family 7 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 7 and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320362 [Multi-domain]  Cd Length: 277  Bit Score: 39.87  E-value: 1.36e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  19 VSLLTNLSVLLCYCQSSELrsHVPGIFIL-NLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQA-ASFAETFLTTNAML 96
Cdd:cd15234  13 VTVLGNLLIILAVSSDSHL--HTPMYFFLsNLSFADICFSSTTVPKMLVNIQTQSKSISYTGCLTqMCFFLLFGGLDNFL 90
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 47220248  97 sMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLM 145
Cdd:cd15234  91 -LAVMAYDRYVAICHPLHYTVIMNPCLCGLLVLLSLLISILDSLLHSLM 138
7tmA_GPR176 cd15006
orphan G protein-coupled receptor 176, member of the rhodopsin-like class A GPCR family; ...
14-136 1.42e-03

orphan G protein-coupled receptor 176, member of the rhodopsin-like class A GPCR family; GPR176 is a putative G protein-coupled receptor that belongs to the class A GPCR superfamily; no endogenous ligand for GPR176 has yet been identified. The class A rhodopsin-like GPCRs represent a widespread protein family that includes the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320135 [Multi-domain]  Cd Length: 289  Bit Score: 39.86  E-value: 1.42e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  14 LVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPttfLGVAENGKP------FGDPFCQAASFAE 87
Cdd:cd15006   7 VVIFVGSLLGNFMVLWSTCRTSVFKS-VTNRFIKNLACSGICASLVCVP---FDIVLSASPhccwwiYTLLFCKVIKFLH 82
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVFPLSYS-SKMRYRDallMVAYSWLQSL 136
Cdd:cd15006  83 KVFCSVTVLSFAAIALDRYYSVLYPLERKiSDAKSRD---LVIYIWAHAV 129
7tmA_mAChR_M2 cd15297
muscarinic acetylcholine receptor subtype M2, member of the class A family of ...
13-136 1.50e-03

muscarinic acetylcholine receptor subtype M2, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of M2 receptor causes a decrease in cAMP production, generally leading to inhibitory-type effects. This causes an outward current of potassium in the heart, resulting in a decreased heart rate. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320424 [Multi-domain]  Cd Length: 262  Bit Score: 39.56  E-value: 1.50e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  13 VLVTAVVSLLT---NLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETF 89
Cdd:cd15297   4 VLVAGSLSLVTiigNILVMVSIKVNRHLQT-VNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLALDYV 82
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 47220248  90 LTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSL 136
Cdd:cd15297  83 VSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSF 129
7tmA_mAChR_M3 cd15299
muscarinic acetylcholine receptor subtype M3, member of the class A family of ...
15-136 1.51e-03

muscarinic acetylcholine receptor subtype M3, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. The M3 receptor is mainly located in smooth muscle, exocrine glands and vascular endothelium. It induces vomiting in the central nervous system and is a critical regulator of glucose homeostasis by modulating insulin secretion. Generally, M3 receptor causes contraction of smooth muscle resulting in vasoconstriction and increased glandular secretion. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320426 [Multi-domain]  Cd Length: 274  Bit Score: 39.55  E-value: 1.51e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  15 VTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNA 94
Cdd:cd15299  12 ILALVTIIGNILVIVSFKVNKQLKT-VNNYFLLSLACADLIIGVISMNLFTTYIIMNRWALGNLACDLWLSIDYVASNAS 90
                        90       100       110       120
                ....*....|....*....|....*....|....*....|..
gi 47220248  95 MLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSL 136
Cdd:cd15299  91 VMNLLVISFDRYFSITRPLTYRAKRTTKRAGVMIGLAWVISF 132
7tmA_SSTR3 cd15972
somatostatin receptor type 3, member of the class A family of seven-transmembrane G ...
8-305 1.57e-03

somatostatin receptor type 3, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled somatostatin receptors (SSTRs) are composed of five distinct subtypes (SSTR1-5) that display strong sequence similarity with opioid receptors. All five receptor subtypes bind the natural somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. SSTR3 is coupled to inward rectifying potassium channels. SSTR3 plays critical roles in growth hormone secretion, endothelial cell cycle arrest and apoptosis. Furthermore, SSTR3 is expressed in the normal human pituitary and in nearly half of pituitary growth hormone adenomas.


Pssm-ID: 320638 [Multi-domain]  Cd Length: 279  Bit Score: 39.40  E-value: 1.57e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAaINMPTTFLGVAENGKPFGDPFCQAASFAE 87
Cdd:cd15972   2 LIPLVYLVVCVVGLGGNTLVIYVVLRYSASES-VTNIYILNLALADELFM-LGLPFLAAQNALSYWPFGSFMCRLVMTVD 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLqsLGFSLTQLLMNWGGYSHTYASCTVHLEDGSRL 167
Cdd:cd15972  80 AINQFTSIFCLTVMSVDRYLAVVHPIRSSKWRKPPVAKTVNATVWA--LSFLVVLPVVIFSGVPGGMGTCHIAWPEPAQV 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 168 ApYAAFTALFHSSSFLLCLLVLCFAYLKVLRVARSHCKRidvitvqtllllvdIHPSVKERclaqqKKRRQRATKKICIF 247
Cdd:cd15972 158 W-RAGFIIYTATLGFFCPLLVICLCYLLIVVKVRSSGRR--------------VRATSTKR-----RGSERKVTRMVVIV 217
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 248 IGSFVLCFSPYVVTRQLVELIPSVHIPRYWGVT--TKCLTYAKTSTDAFVYCLLRQQYRK 305
Cdd:cd15972 218 VAAFVLCWLPFYALNIVNLVCPLPEEPSLFGLYffVVVLSYANSCANPIIYGFLSDNFKQ 277
7tmA_NK1R cd16002
neurokinin 1 receptor, member of the class A family of seven-transmembrane G protein-coupled ...
8-113 1.62e-03

neurokinin 1 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The neurokinin 1 receptor (NK1R), also known as tachykinin receptor 1 (TACR1) or substance P receptor (SPR), is a G-protein coupled receptor found in the mammalian central nervous and peripheral nervous systems. The tachykinins act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. SP is an extremely potent vasodilator through endothelium dependent mechanism and is released from the autonomic sensory nerves. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception.


Pssm-ID: 320668 [Multi-domain]  Cd Length: 284  Bit Score: 39.46  E-value: 1.62e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAE 87
Cdd:cd16002   2 LWAVAYSVIVVVSVVGNIIVMWIILAHKRMRT-VTNYFLVNLAFAEASMSAFNTVINFTYAIHNEWYYGLEYCKFHNFFP 80
                        90       100
                ....*....|....*....|....*.
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVFPL 113
Cdd:cd16002  81 IAAVFASIYSMTAIALDRYMAIIHPL 106
7tmA_Retinal_GPR cd15072
retinal G protein coupled receptor, member of the class A family of seven-transmembrane G ...
7-150 1.66e-03

retinal G protein coupled receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents the retinal G-protein coupled receptor (RGR) found exclusively in retinal pigment epithelium (RPE) and Muller cells. RGR is a member of the class A rhodopsin-like receptor family. As with other opsins, RGR binds all-trans retinal and contains a conserved lysine reside on the seventh helix. RGR functions as a photoisomerase to catalyze the conversion of all-trans-retinal to 11-cis-retinal. Two mutations in RGR gene are found in patients with retinitis pigmentosa, indicating that RGR is essential to the visual process.


Pssm-ID: 320200 [Multi-domain]  Cd Length: 260  Bit Score: 39.26  E-value: 1.66e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   7 FLLEVCVLVTAVVSLLTNLSVLLCYCQSSELR--SHvpgIFILNLSFSNILL---AAINMPTTFLGVAengkPFGDPFCQ 81
Cdd:cd15072   1 FAVGSILLVEALVGFSLNGLTILSFCKTRELRtpSN---LLVLSLAVADMGIslnALVAASSSLLRRW----PYGSEGCQ 73
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 47220248  82 AASFAETFLTTNAMLSMAALSVDRWIAVVFPlsysSKMRYRDALLMVAYSWLQSLgFSLTQLLMNWGGY 150
Cdd:cd15072  74 AHGFQGFFTALASICSSAAIAWDRYHHYCTR----SKLQWSTAISLVLFVWLFSA-FWAAMPLLGWGEY 137
7tmA_OR1330-like cd15946
olfactory receptor 1330 and related proteins, member of the class A family of ...
8-140 1.73e-03

olfactory receptor 1330 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes olfactory receptors 1330 from mouse, Olr859 from rat, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320612  Cd Length: 270  Bit Score: 39.38  E-value: 1.73e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELrsHVPGIFIL-NLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFA 86
Cdd:cd15946   2 ILFAVFLLIYLSILLGNGLIITLICLDSRL--HTPMYFFLsVLSLLDMSYVTTTVPQMLVHLLSHKKTISFTGCVAQMYI 79
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....
gi 47220248  87 ETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSL 140
Cdd:cd15946  80 FLALGITECTLFSVMAYDRYVAICHPLRYKVIMSWGLCILMVAGSWVCGVFSSL 133
7tmA_OR5AR1-like cd15944
olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of ...
6-136 1.95e-03

olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AR1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320610 [Multi-domain]  Cd Length: 294  Bit Score: 39.38  E-value: 1.95e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   6 EFLLEVCVLVTAVVSLLTNLSVLLCYCQSSELrsHVPGIFIL-NLSFSNILLAAINMPTTFLGVAENGK--PFGDPFCQA 82
Cdd:cd15944  13 QIILFVVFLIIYLVNVVGNLGMIILITTDSQL--HTPMYFFLcNLSFCDLGYSSAIAPRMLADFLTKHKviSFSGCATQF 90
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....
gi 47220248  83 ASFAeTFLTTNAMLsMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSL 136
Cdd:cd15944  91 AFFV-GFVDAECYV-LAAMAYDRYVAICNPLLYSTLMSKRVCLQLMAGSYLAGL 142
PHA03087 PHA03087
G protein-coupled chemokine receptor-like protein; Provisional
7-136 2.02e-03

G protein-coupled chemokine receptor-like protein; Provisional


Pssm-ID: 222976 [Multi-domain]  Cd Length: 335  Bit Score: 39.38  E-value: 2.02e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248    7 FLLEVCVLVTAVVSLLTNLSVL--LCYCQSSElrshVPGIFILNLSFSNILLAAINMPTTFLGVAENGKpFGDPFCQAAS 84
Cdd:PHA03087  41 TILIVVYSTIFFFGLVGNIIVIyvLTKTKIKT----PMDIYLLNLAVSDLLFVMTLPFQIYYYILFQWS-FGEFACKIVS 115
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 47220248   85 FAETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSL 136
Cdd:PHA03087 116 GLYYIGFYNSMNFITVMSVDRYIAIVHPVKSNKINTVKYGYIVSLVIWIISI 167
7tmA_OR8D-like cd15406
olfactory receptor subfamily 8D and related proteins, member of the class A family of ...
4-129 2.06e-03

olfactory receptor subfamily 8D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8D and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320528 [Multi-domain]  Cd Length: 290  Bit Score: 39.27  E-value: 2.06e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   4 IPEFLLevcVLVTAVVSLLTNLSVLLCYCQSSELrsHVPGIFIL-NLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQA 82
Cdd:cd15406  10 LPLFLL---FLGIYVVTVVGNLGMILLITLSSQL--HTPMYYFLsNLSFIDLCYSSVITPKMLVNFVSEKNIISYPECMT 84
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 47220248  83 ASFAETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVA 129
Cdd:cd15406  85 QLFFFCVFAIAECYMLTAMAYDRYVAICNPLLYNVTMSPRVCSLLVA 131
7tmA_OR1E-like cd15236
olfactory receptor subfamily 1E and related proteins, member of the class A family of ...
20-133 2.11e-03

olfactory receptor subfamily 1E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1E, 1J, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320364 [Multi-domain]  Cd Length: 277  Bit Score: 38.98  E-value: 2.11e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  20 SLLTNLSVLLCYCQSSELrsHVPGIFIL-NLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNAMLSM 98
Cdd:cd15236  14 TVLGNLLIILLIRLDSHL--HTPMYFFLsHLAFTDVSFSSVTVPKMLMNMQTQDQSIPYAGCISQMYFFIFFGCLDSFLL 91
                        90       100       110
                ....*....|....*....|....*....|....*
gi 47220248  99 AALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWL 133
Cdd:cd15236  92 AVMAYDRYVAICHPLHYTAIMRPELCVLLVAGSWV 126
7tmA_mAChR_M4 cd15298
muscarinic acetylcholine receptor subtype M4, member of the class A family of ...
14-136 2.13e-03

muscarinic acetylcholine receptor subtype M4, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to G(i/o) types of G proteins. The M4 receptor is mainly found in the CNS and function as an inhibitory autoreceptor regulating acetycholine release. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341344 [Multi-domain]  Cd Length: 262  Bit Score: 39.23  E-value: 2.13e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  14 LVTAVVSLLT---NLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFL 90
Cdd:cd15298   5 TVTGSLSLVTvvgNILVMLSIKVNRQLQT-VNNYFLFSLACADLIIGAFSMNLYTVYIIKGYWPLGAVVCDLWLALDYVV 83
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
gi 47220248  91 TTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSL 136
Cdd:cd15298  84 SNASVMNLLIISFDRYFCVTKPLTYPARRTTKMAGLMIAAAWVLSF 129
7tmA_MCR cd15103
melanocortin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
14-270 2.40e-03

melanocortin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320231 [Multi-domain]  Cd Length: 270  Bit Score: 39.01  E-value: 2.40e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  14 LVTAVVSLLTNLSVLLCYCQSSELRSHVPgIFILNLSFSNILLAAINMPTTFLGVAENGK--PFGDPFCQAASFAETFLT 91
Cdd:cd15103   8 LTLGIVSLLENILVILAIAKNKNLHSPMY-FFICSLAVADMLVSVSNALETIVIILLNNGylVPRDSFEQHIDNVIDSMI 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  92 TNAML----SMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLmnwggYSHTYASCTvhledgsrl 167
Cdd:cd15103  87 CSSLLasicSLLAIAVDRYITIFYALRYHSIMTVRRAGVIITAIWVFCTVCGILFII-----YSDSVPVII--------- 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 168 apyaAFTALFhsssfLLCLLVLCFAYLKVLRVARSHCKRIDVitvqtllllvdihpsvkercLAQQKKRRQRATKK---- 243
Cdd:cd15103 153 ----CLISMF-----FAMLVLMASLYVHMFLLARSHVKKIAA--------------------LPGQRSTRQRANMKgavt 203
                       250       260
                ....*....|....*....|....*..
gi 47220248 244 ICIFIGSFVLCFSPYVVTRQLVELIPS 270
Cdd:cd15103 204 LTILLGVFIFCWAPFFLHLTLMISCPS 230
7tmA_Adenosine_R_A2B cd15069
adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G ...
90-144 2.45e-03

adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2B receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320197 [Multi-domain]  Cd Length: 294  Bit Score: 39.15  E-value: 2.45e-03
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 47220248  90 LTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLL 144
Cdd:cd15069  81 LTQSSIFSLLAVAVDRYLAIKVPLRYKSLVTGKRARGVIAVLWVLAFGIGLTPFL 135
7tmA_GPR4 cd15366
proton-sensing G protein-coupled receptor 4, member of the class A family of ...
43-164 2.52e-03

proton-sensing G protein-coupled receptor 4, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein-coupled receptor 4 (GPR4) is a member of the proton-sensing G-protein-coupled receptor (GPCR) family which also includes the G2 accumulation receptor (G2A, also known as GPR132), the T cell death associated gene-8 receptor (TDAG8, GPR65), ovarian cancer G-protein receptor 1 (OGR-1, GPR68), and G-protein-coupled receptor 4 (GPR4). Proton-sensing G-protein coupled receptors sense pH of 7.6 to 6.0 and mediates a variety of biological activities in neutral and mildly acidic pH conditions, whereas the acid-sensing ionotropic ion channels typically sense strong acidic pH. GPR4 overexpression in melanoma cells was shown to reduce cell migration, membrane ruffling, and cell spreading under acidic pH conditions. Activation of GPR4 via extracellular acidosis is coupled to the G(s), G(q), and G(12/13) pathways.


Pssm-ID: 320488 [Multi-domain]  Cd Length: 280  Bit Score: 39.01  E-value: 2.52e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  43 GIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFaetFLTTNAMLSMAAL---SVDRWIAVVFPLSYSSKM 119
Cdd:cd15366  36 GVYLLNLSVSDLLYIATLPLWIDYFLHRDNWIHGPESCKLFGF---IFYTNIYISIAFLcciSVDRYLAVAHPLRFAKVR 112
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*...
gi 47220248 120 RYRDALLMVAYSWLQSLGFSLTQLLMN---WGGYSHTYASCTVHLEDG 164
Cdd:cd15366 113 RVKTAVAVSAVVWAIEIGANSAPLFHDelfRDRYNHTFCFEKYPMEDW 160
7tmA_PAR4 cd15372
protease-activated receptor 4, member of the class A family of seven-transmembrane G ...
44-145 2.63e-03

protease-activated receptor 4, member of the class A family of seven-transmembrane G protein-coupled receptors; Protease-acted receptors (PARs) are seven-transmembrane proteins that belong to the class A G-protein coupled receptor (GPCR) family. Four different types of the protease-activated receptors have been identified: PAR1, PAR2, PAR3, and PAR4. PARs are predominantly expressed in platelets and are activated by serine proteases such as thrombin, trypsin, and tryptase. These proteases cleave the extracellular domain of the receptor to form a new N-terminus, which in turn functions as a tethered ligand. The newly-formed tethered ligand binds intramolecularly to activate the receptor and triggers G-protein binding and intracellular signaling. PAR1, PA3, and PAR4 are activated by thrombin, whereas PAR2 is activated by trypsin. The PARs are known to couple with several G-proteins including Gi (cAMP inhibitory), G12/13 (Rho and Ras activation), and Gq (calcium signaling) to activate downstream signaling messengers which induces numerous cellular and physiological effects.


Pssm-ID: 320494 [Multi-domain]  Cd Length: 274  Bit Score: 38.96  E-value: 2.63e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  44 IFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASfaeTFLTTN---AMLSMAALSVDRWIAVVFPLSYSSKMR 120
Cdd:cd15372  36 IFLINLAVADLLLILVLPFKISYHFLGNNWPFGEGLCRVVT---AFFYGNmycSVLLLMCISLDRYLAVVHPFFARTLRS 112
                        90       100
                ....*....|....*....|....*
gi 47220248 121 YRDALLMVAYSWLQSLGFSLTQLLM 145
Cdd:cd15372 113 RRFALCMCTAIWLIAAALTLPLTLQ 137
7tmA_OR2T-like cd15421
olfactory receptor subfamily 2T and related proteins, member of the class A family of ...
13-133 2.63e-03

olfactory receptor subfamily 2T and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 2T, 2M, 2L, 2V, 2Z, 2AE, 2AG, 2AK, 2AJ, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320543  Cd Length: 277  Bit Score: 38.69  E-value: 2.63e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  13 VLVTAVVSLLTNLSVLLCYCqsSELRSHVPGIFILN-LSFSNILLAAINMP---TTFLGVAENGKPFGdpfCQAASF--- 85
Cdd:cd15421   7 ILLIFLVALTGNALLILLIW--LDSRLHTPMYFLLSqLSLMDLMLISTTVPkmaTNFLSGRKSISFVG---CGTQIFffl 81
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|..
gi 47220248  86 ----AETFLttnamlsMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWL 133
Cdd:cd15421  82 tlggAECLL-------LALMAYDRYVAICHPLRYPVLMSPRVCLLMAAGSWL 126
7tmA_Parapinopsin cd15075
non-visual parapinopsin, member of the class A family of seven-transmembrane G protein-coupled ...
8-304 2.76e-03

non-visual parapinopsin, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the non-visual pineal pigment, parapinopsin, which is a member of the class A of the seven transmembrane G protein-coupled receptors. Parapinopsin serves as a UV-sensitive pigment for the wavelength discrimination in the pineal-related organs of lower vertebrates such as reptiles, amphibians, and fish. Although parapinopsin is phylogenetically related to vertebrate visual pigments such as rhodopsin, which releases its retinal chromophore and bleaches, the parapinopsin photoproduct is stable and does not bleach. The vertebrate non-visual opsin family includes pinopsins, parapinopsin, VA (vertebrate ancient) opsins, and parietopsins. These non-visual opsins are expressed in various extra-retinal tissues and/or in non-rod, non-cone retinal cells.


Pssm-ID: 320203 [Multi-domain]  Cd Length: 279  Bit Score: 38.99  E-value: 2.76e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRShvpgifilNLSFSNILLAAINMPTTFLG----VAENGKPF---GDPFC 80
Cdd:cd15075   2 ILSIIMAVFSIASVVLNATVIIVTLRHKQLRQ--------PLNYALVNLAVADLGTTVFGgllsVVTNAVGYfnlGRVGC 73
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  81 QAASFAETFLTTNAMLSMAALSVDRWIAVVFPLSySSKMRYRDALLMVAYSWLQSLGFSlTQLLMNWGGYshtyasctvH 160
Cdd:cd15075  74 VLEGFAVAFFGIAALCTVAVIAVDRLFVVCKPLG-TLTFQTRHALAGIASSWLWSLIWN-TPPLFGWGSY---------Q 142
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 161 LED-GSRLAPyaaftalfHSSSFLLCLLVLCFAYLKVlrvarshCKRID--VITVQTLLLLVDIHPSVKERCL--AQQKK 235
Cdd:cd15075 143 LEGvMTSCAP--------DWYSRDPVNVSYILCYFSF-------CFAIPfaIILVSYGYLLWTLRQVAKLGVAegGSTAK 207
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 47220248 236 RRQRATKKICIFIGSFVLCFSPYVVTRQLVELIPSVHIPRYWGVTTKCLTYAKTSTDAFVYCLLRQQYR 304
Cdd:cd15075 208 AEVQVARMVVVMVMAFLLCWLPYAAFALTVVSKPDVYINPLIATVPMYLAKSSTVYNPIIYIFMNKQFR 276
7tmA_OR8H-like cd15411
olfactory receptor subfamily 8H and related proteins, member of the class A family of ...
14-132 2.80e-03

olfactory receptor subfamily 8H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8H, 8I, 5F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320533 [Multi-domain]  Cd Length: 279  Bit Score: 38.84  E-value: 2.80e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  14 LVTAVVSLLTNLSVLLCYCQSSELrsHVPGIFIL-NLSFSNILLAAINMPTTFLGVAENGK--PFGDPFCQAASFAeTFL 90
Cdd:cd15411   8 LVIYVITVMGNLGMILLIRADSQL--HTPMYFFLsNLSFVDFCYSSTITPKALENFLSGRKaiSFAGCFVQMYFFI-ALA 84
                        90       100       110       120
                ....*....|....*....|....*....|....*....|..
gi 47220248  91 TTNAMLsMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSW 132
Cdd:cd15411  85 TTECFL-LGLMAYDRYVAICNPLLYTVVMSRRVCLKLAAGSY 125
7tmA_Kappa_opioid_R cd15091
opioid receptor subtype kappa, member of the class A family of seven-transmembrane G ...
15-113 3.32e-03

opioid receptor subtype kappa, member of the class A family of seven-transmembrane G protein-coupled receptors; The kappa-opioid receptor binds the opioid peptide dynorphin as the primary endogenous ligand. The opioid receptor family is composed of four major subtypes: mu (MOP), delta (DOP), kappa (KOP) opioid receptors, and the nociceptin/orphanin FQ peptide receptor (NOP). They are distributed widely in the central nervous system and respond to classic alkaloid opiates, such as morphine and heroin, as well as to endogenous peptide ligands, which include dynorphins, enkephalins, endorphins, endomorphins, and nociceptin. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others.


Pssm-ID: 320219 [Multi-domain]  Cd Length: 282  Bit Score: 38.40  E-value: 3.32e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  15 VTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAiNMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNA 94
Cdd:cd15091   9 VVFVVGLVGNSLVMFVIIRYTKMKT-ATNIYIFNLALADALVTT-TMPFQSTVYLMNSWPFGDVLCKIVISIDYYNMFTS 86
                        90
                ....*....|....*....
gi 47220248  95 MLSMAALSVDRWIAVVFPL 113
Cdd:cd15091  87 IFTLTMMSVDRYIAVCHPV 105
7tmA_CCK-BR cd15979
cholecystokinin receptor type B, member of the class A family of seven-transmembrane G ...
15-135 3.54e-03

cholecystokinin receptor type B, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320645 [Multi-domain]  Cd Length: 275  Bit Score: 38.64  E-value: 3.54e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  15 VTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNA 94
Cdd:cd15979   9 VIFLLSVFGNMLIIVVLGLNKRLRT-VTNSFLLSLALSDLMLAVFCMPFTLIPNLMGTFIFGEVICKAVAYLMGVSVSVS 87
                        90       100       110       120
                ....*....|....*....|....*....|....*....|.
gi 47220248  95 MLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQS 135
Cdd:cd15979  88 TFSLVAIAIERYSAICNPLQSRVWQTRSHAYRVIAATWLLS 128
7tmA_CCK-AR cd15978
cholecystokinin receptor type A, member of the class A family of seven-transmembrane G ...
18-136 3.70e-03

cholecystokinin receptor type A, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320644 [Multi-domain]  Cd Length: 278  Bit Score: 38.31  E-value: 3.70e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  18 VVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNAMLS 97
Cdd:cd15978  12 LLSVLGNSLIIAVLIRNKRMRT-VTNIFLLSLAVSDLMLCLFCMPFTLIPNLLKDFIFGSAVCKTATYFMGISVSVSTFN 90
                        90       100       110
                ....*....|....*....|....*....|....*....
gi 47220248  98 MAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSL 136
Cdd:cd15978  91 LVAISLERYSAICKPLKSRVWQTKSHALKVIAATWCLSF 129
7tmA_NAGly_R_GPR18 cd15166
N-arachidonyl glycine receptor, GPR18, member of the class A family of seven-transmembrane G ...
18-146 4.11e-03

N-arachidonyl glycine receptor, GPR18, member of the class A family of seven-transmembrane G protein-coupled receptors; N-arachidonyl glycine (NAGly), an endogenous metabolite of the endocannabinoid anandamide, has been identified as an endogenous ligand of the G(i/o) protein-coupled receptor 18 (GPR18). NAGly is involved in directing microglial migration in the CNS through activation of GPR18. NAGly-GPR18 signaling is thought to play an important role in microglial-neuronal communication. Recent studies also show that GPR18 functions as the abnormal cannabidiol (Abn-CBD) receptor. Abn-CBD is a synthetic isomer of cannabidiol and is inactive at cannabinoid receptors (CB1 or CB2), but acts as a selective agonist at GPR18. The NAGly receptor is a member of the class A G protein-coupled receptor superfamily, which all have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, which then activate the heterotrimeric G proteins. G-proteins regulate a variety of cellular functions including metabolic enzymes, ion channels, and transporters, among many others.


Pssm-ID: 320294 [Multi-domain]  Cd Length: 275  Bit Score: 38.26  E-value: 4.11e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  18 VVSLLTNLSVLLCYCQSSELRSHVPgIFILNLSFSNiLLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNAMLS 97
Cdd:cd15166  12 IIGLFVNITALWVFSCTTKKRTTVT-VYMMNVALVD-LIFILSLPFRMVYYAKDEWPFGDYFCRILGALTVFYPSIALWL 89
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 47220248  98 MAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMN 146
Cdd:cd15166  90 LAFISADRYMAIVQPKHAKELKNTPKAVLACVGVWIMTLASTFPLLFLY 138
7tmA_OR10G6-like cd15942
olfactory receptor subfamily 10G6 and related proteins, member of the class A family of ...
4-133 4.19e-03

olfactory receptor subfamily 10G6 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10G6 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320608  Cd Length: 275  Bit Score: 38.18  E-value: 4.19e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   4 IPEFLLEVCVLVtavVSLLTNLSVLLCYcqSSELRSHVPGI-FILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQA 82
Cdd:cd15942   1 APLFLFFLVVYL---LTLSGNSLIILVV--ISDLQLHKPMYwFLCHLSILDMAVSTVVVPKVIAGFLSGGRIISFGGCVT 75
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|.
gi 47220248  83 ASFAETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWL 133
Cdd:cd15942  76 QLFFFHFLGCAECFLYTVMAYDRFLAICKPLHYSTIMNHRACLCLSLGTWL 126
7tmA_MC2R_ACTH_R cd15350
melanocortin receptor subtype 2, also called adrenocorticotropic hormone receptor, member of ...
10-270 4.59e-03

melanocortin receptor subtype 2, also called adrenocorticotropic hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320472 [Multi-domain]  Cd Length: 270  Bit Score: 38.22  E-value: 4.59e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  10 EVCVLVTAVVSLLTNLSVLLCYCQSSELrsHVPG-IFILNLSFSNILLAAINMPTTFLGVAENG---KPFGDPFCQAASF 85
Cdd:cd15350   4 EEVFFTIAAVGLLENLLVLVAVIKNKNL--HSPMyFFICSLAVSDMLGSLYKTLENILIILADMgylNRRGPFETKLDDI 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  86 AETFLTTN---AMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLmnwggYSHTYASCTvhle 162
Cdd:cd15350  82 MDSLFCLSllgSIFSILAIAADRYITIFHALRYHNIMTMRRTLVILAIIWTFCGGSGILMIL-----FFHFVATVI---- 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 163 dgsrlapyaAFTALFhsssfLLCLLVLCFAYLKVLRVARSHCKRIDVITVQTllllvdihpsvkerclAQQKKRRQRATK 242
Cdd:cd15350 153 ---------CFTVLF-----FLMLVLILCLYVHMFLLARSHARKIASLPNHH----------------AQHQRSNMRGAI 202
                       250       260
                ....*....|....*....|....*...
gi 47220248 243 KICIFIGSFVLCFSPYVVTRQLVELIPS 270
Cdd:cd15350 203 TLTILLGVFVCCWAPFVLHLLLMMFCPM 230
7tmA_BRS-3 cd15123
bombesin receptor subtype 3, member of the class A family of seven-transmembrane G ...
41-257 4.83e-03

bombesin receptor subtype 3, member of the class A family of seven-transmembrane G protein-coupled receptors; BRS-3 is classified as an orphan receptor and belongs to the bombesin subfamily of G-protein coupled receptors, whose members also include neuromedin B receptor (NMBR) and gastrin-releasing peptide receptor (GRPR). Bombesin is a tetradecapeptide, originally isolated from frog skin. Mammalian bombesin-related peptides are widely distributed in the gastrointestinal and central nervous systems. The bombesin family receptors couple primarily to the G proteins of G(q/11) family. BRS-3 interacts with known naturally-occurring bombesin-related peptides with low affinity; however, no endogenous high-affinity ligand to the receptor has been identified. BRS-3 is suggested to play a role in sperm cell division and maturation.


Pssm-ID: 320251 [Multi-domain]  Cd Length: 294  Bit Score: 37.98  E-value: 4.83e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  41 VPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNAMLSMAALSVDRWIAVVFPLsyssKMR 120
Cdd:cd15123  34 VPNIFITSLAFGDLLLLLTCVPVDATRYIADTWLFGRIGCKLLSFIQLTSVGVSVFTLTVLSADRYRAIVKPL----ELQ 109
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 121 YRDALLMVAYS----WLQSLGFSLTQLLMNwGGYSHTYASCTVHLEdgsRLAPYAAFTALFHSSSFLLCLLVLCFAYLKV 196
Cdd:cd15123 110 TSDAVLKTCCKagcvWIVSMLFAIPEAVFS-DLYSFRDPEKNTTFE---ACAPYPVSEKILQEIHSLLCFLVFYIIPLSI 185
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 47220248 197 LRVARShckridvITVQTLLLLVDIHPSVKERCLAQQKKRRQRATKKICIFIGSFVLCFSP 257
Cdd:cd15123 186 ISVYYF-------LIARTLYKSTFNMPAEEHSHARKQIESRKRVAKTVLVLVALFAFCWLP 239
7tmA_Histamine_H3R cd15296
histamine receptor subtypes H3R and H3R-like, member of the class A family of ...
8-133 4.92e-03

histamine receptor subtypes H3R and H3R-like, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes histamine subtypes H3R and H3R-like, members of the histamine receptor family, which belong to the class A of GPCRs. Histamine plays a key role as chemical mediator and neurotransmitter in various physiological and pathophysiological processes in the central and peripheral nervous system. Histamine exerts its functions by binding to four different G protein-coupled receptors (H1-H4). The H3 and H4 receptors couple to the G(i)-proteins, which leading to the inhibition of cAMP formation. The H3R receptor functions as a presynaptic autoreceptors controlling histamine release and synthesis. The H4R plays an important role in histamine-mediated chemotaxis in mast cells and eosinophils. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320423 [Multi-domain]  Cd Length: 271  Bit Score: 37.85  E-value: 4.92e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRSHvPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAE 87
Cdd:cd15296   2 ILAVLMALLVVATVLGNALVILAFVVDSSLRTQ-GNFFFLNLAISDFLVGGFCIPLYIPYVLTGRWKFGRGLCKLWLVVD 80
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 47220248  88 TFLTTNAMLSMAALSVDRWIAVVFPLSY-SSKMRYRDALLMVAYSWL 133
Cdd:cd15296  81 YLLCTASVFNIVLISYDRFLSVTRAVSYrAQKGMTRQAVLKMVLVWV 127
7tmA_P2Y1-like cd15168
P2Y purinoceptors 1, 2, 4, 6, 11 and similar proteins, member of the class A family of ...
8-264 6.27e-03

P2Y purinoceptors 1, 2, 4, 6, 11 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; The P2Y receptor family is composed of eight subtypes, which are activated by naturally occurring extracellular nucleotides such as ATP, ADP, UTP, UDP, and UDP-glucose. These eight receptors are ubiquitous in human tissues and can be further classified into two subfamilies based on sequence homology and second messenger coupling: a subfamily of five P2Y1-like receptors (P2Y1, P2Y2, P2Y4, P2Y6, and P2Y11Rs) that are coupled to G(q) protein to activate phospholipase C (PLC) and a second subfamily of three P2Y12-like receptors (P2Y12, P2YR13, and P2Y14Rs) that are coupled to G(i) protein to inhibit adenylate cyclase. Several cloned subtypes, such as P2Y3, P2Y5, and P2Y7-10, are not functional mammalian nucleotide receptors. The native agonists for P2Y receptors are: ATP (P2Y2, P2Y12), ADP (P2Y1, P2Y12, and P2Y13), UTP (P2Y2, P2Y4), UDP (P2Y6, P2Y14), and UDP-glucose (P2Y14). This cluster only includes P2Y1-like receptors as well as other closely related orphan receptors, such as GPR91 (a succinate receptor) and GPR80/GPR99 (an alpha-ketoglutarate receptor).


Pssm-ID: 341329 [Multi-domain]  Cd Length: 284  Bit Score: 37.68  E-value: 6.27e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSElRSHVPGIFILNLSFSNiLLAAINMPTTFLGVAENGK-PFGDPFCQAASFA 86
Cdd:cd15168   2 FLPIVYGVVFLVGLLLNSVVLYRFIFHLK-PWNSSAIYMFNLAVSD-LLYLLSLPFLIYYYANGDHwIFGDFMCKLVRFL 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  87 ETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNWGGYSHTYASCtVHLEDGSR 166
Cdd:cd15168  80 FYFNLYGSILFLTCISVHRYLGICHPLRSLGKLKKRHAVAISVAVWILVLLQLLPILFFATTGRKNNRTTC-YDTTSPEE 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 167 LAPYAAFTALFHSSSFLLCLLVLCFAYLKVLRVarshckridvitvqtllLLVDIHPSVKERclaqqkkRRQRATKKICI 246
Cdd:cd15168 159 LNDYVIYSMVLTGLGFLLPLLIILACYGLIVRA-----------------LIRKLGEGVTSA-------LRRKSIRLVII 214
                       250
                ....*....|....*...
gi 47220248 247 FIGSFVLCFSPYVVTRQL 264
Cdd:cd15168 215 VLALFAVCFLPFHVTRTI 232
7tmA_Apelin_R cd15190
apelin receptor, member of the class A family of seven-transmembrane G protein-coupled ...
8-145 6.61e-03

apelin receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Apelin (APJ) receptor is a G protein-coupled receptor that binds the endogenous peptide ligands, apelin and Toddler/Elabela. APJ is an adipocyte-derived hormone that is ubiquitously expressed throughout the human body and Toddler/Elabela is a short secretory peptide that is required for normal cardiac development in zebrafish. Activation of APJ receptor plays key roles in diverse physiological processes including vasoconstriction and vasodilation, cardiac muscle contractility, angiogenesis, and regulation of water balance and food intake.


Pssm-ID: 341340 [Multi-domain]  Cd Length: 304  Bit Score: 37.82  E-value: 6.61e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   8 LLEVCVLVTAVVSLLTNLSVLLCYCQSSELRSHVPGIFILNLSFSNiLLAAINMPT----TFLGVAEngkPFGDPFCQAA 83
Cdd:cd15190  12 LIPVIYMLVFVLGLSGNGLVLWTVFRSKRKRRRSADTFIANLALAD-LTFVVTLPLwavyTALGYHW---PFGSFLCKLS 87
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47220248  84 SFAETFLTTNAMLSMAALSVDRWIAVVFPLSySSKMRYRDALLM-VAYSWLQSLGFSLTQLLM 145
Cdd:cd15190  88 SYLVFVNMYASVFCLTGLSFDRYLAIVRSLA-SAKLRSRTSGIVaLGVIWLLAALLALPALIL 149
7tmA_OR13-like cd15430
olfactory receptor family 13 and related proteins, member of the class A family of ...
7-147 7.26e-03

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13C, 13D, 13F, and 13J), some subfamilies from OR family 2 (2K and 2S), and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320547 [Multi-domain]  Cd Length: 270  Bit Score: 37.35  E-value: 7.26e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   7 FLLEVCVLVTAVVSLLTNLSVLLCYCQSSELrsHVPGIFIL-NLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASF 85
Cdd:cd15430   1 ILLFVLCLIMYLVILLGNGVLIIITILDSHL--HTPMYFFLgNLSFLDICYTSSSVPLMLVNFLSERKTISFSGCAVQMY 78
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47220248  86 AETFLTTNAMLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNW 147
Cdd:cd15430  79 LSLAMGSTECVLLAVMAYDRYVAICNPLRYPIIMNKRLCVQMAAGSWVTGFLNSLVETVLAM 140
7tmA_SSTR4 cd15973
somatostatin receptor type 4, member of the class A family of seven-transmembrane G ...
15-136 7.37e-03

somatostatin receptor type 4, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled somatostatin receptors (SSTRs) are composed of five distinct subtypes (SSTR1-5) that display strong sequence similarity with opioid receptors. All five receptor subtypes bind the natural somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. SSTR4 plays a critical role in mediating inflammation. Unlike other SSTRs, SSTR4 subtype is not detected in all pituitary adenomas while it is expressed in the normal human pituitary.


Pssm-ID: 320639 [Multi-domain]  Cd Length: 274  Bit Score: 37.53  E-value: 7.37e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  15 VTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAaINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNA 94
Cdd:cd15973   9 LVCLVGLIGNSMVIFVILRYAKMKT-ATNIYILNLAIADELFM-LSVPFLAASAALQHWPFGSAMCRTVLSVDGINMFTS 86
                        90       100       110       120
                ....*....|....*....|....*....|....*....|..
gi 47220248  95 MLSMAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSL 136
Cdd:cd15973  87 VFCLTVLSVDRYIAVVHPLRAARYRRPTVAKMINICVWILSL 128
7tmA_GPR65_TDAG8 cd15365
proton-sensing G protein-coupled receptor 65, member of the class A family of ...
7-133 7.42e-03

proton-sensing G protein-coupled receptor 65, member of the class A family of seven-transmembrane G protein-coupled receptors; The T cell death associated gene-8 receptor (TDAG8, also known as GPR65) is a member of the proton-sensing G-protein-coupled receptor (GPCR) family which also includes the G2 accumulation receptor (G2A, also known as GPR132), ovarian cancer G-protein receptor 1 (OGR-1, GPR68), and G-protein-coupled receptor 4 (GPR4). Proton-sensing G-protein coupled receptors sense pH of 7.6 to 6.0 and mediates a variety of biological activities in neutral and mildly acidic pH conditions, whereas the acid-sensing ionotropic ion channels typically sense strong acidic pH. Activation of TDAG8 by extracellular acidosis increases the cAMP production, stimulates Rho, and induces stress fiber formation. TDAG8 has also been shown to regulate the extracellular acidosis-induced inhibition of pro-inflammatory cytokine production in peritoneal macrophages.


Pssm-ID: 320487 [Multi-domain]  Cd Length: 277  Bit Score: 37.45  E-value: 7.42e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248   7 FLLEVCVLVTAVVSLLTNLSVLLCYCQSSELRSHVpGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFA 86
Cdd:cd15365   1 YLFPFVYIFVIVISIPSNCISLYVSCLQIRKKNEL-GVYLFNLSLSDLLYIVILPLWIDYLWNGDNWTLSGFVCIFSAFL 79
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 47220248  87 --ETFLTTNAMLsmAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWL 133
Cdd:cd15365  80 lyTNFYTSTALL--TCIALDRYLAVVHPLKFMHLRTIRTALSVSVAIWL 126
7tmA_ET-BR cd15976
endothelin B receptor, member of the class A family of seven-transmembrane G protein-coupled ...
42-109 7.82e-03

endothelin B receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Endothelins are able to activate a number of signal transduction processes including phospholipase A2, phospholipase C, and phospholipase D, as well as cytosolic protein kinase activation. They play an important role in the regulation of the cardiovascular system and are the most potent vasoconstrictors identified, stimulating cardiac contraction, regulating the release of vasoactive substances, and stimulating mitogenesis in blood vessels. Two endothelin receptor subtypes have been isolated and identified in vertebrates, endothelin A receptor (ET-A) and endothelin B receptor (ET-B), and are members of the seven transmembrane class A G-protein coupled receptor family which activate multiple effectors via different types of G protein. Some vertebrates contain a third subtype, endothelin A receptor (ET-C). ET-A receptors are mainly located on vascular smooth muscle cells, whereas ET-B receptors are present on endothelial cells lining the vessel wall. Endothelin receptors have also been found in the brain.


Pssm-ID: 320642 [Multi-domain]  Cd Length: 296  Bit Score: 37.53  E-value: 7.82e-03
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 47220248  42 PGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNAMLSMAALSVDRWIAV 109
Cdd:cd15976  35 PNILIASLALGDLLHIIIDIPINVYKLLAEDWPFGVEMCKLVPFIQKASVGITVLSLCALSIDRYRAV 102
7tmA_NMBR cd15125
neuromedin B receptor, member of the class A family of seven-transmembrane G protein-coupled ...
14-117 8.36e-03

neuromedin B receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The neuromedin B receptor (NMBR), also known as BB1, is a G-protein coupled receptor whose endogenous ligand is the neuropeptide neuromedin B. Neuromedin B is a potent mitogen and growth factor for normal and cancerous lung and for gastrointestinal epithelial tissues. NMBR is widely distributed in the CNS, with especially high levels in olfactory nucleus and thalamic regions. The receptor couples primarily to a pertussis-toxin-insensitive G protein of the Gq/11 family, which leads to the activation of phospholipase C. NMBR belongs to the bombesin subfamily of G-protein coupled receptors, whose members also include gastrin-releasing peptide receptor (GRPR) and bombesin receptor subtype 3 (BRS-3). Bombesin is a tetradecapeptide, originally isolated from frog skin.


Pssm-ID: 320253 [Multi-domain]  Cd Length: 292  Bit Score: 37.24  E-value: 8.36e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  14 LVTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTN 93
Cdd:cd15125   8 LLIITVGLLGNITLVKIFITNSAMRS-VPNIFISSLAAGDLLLLVTCVPVDASRYFYEEWMFGTVGCKLIPVIQLTSVGV 86
                        90       100
                ....*....|....*....|....
gi 47220248  94 AMLSMAALSVDRWIAVVFPLSYSS 117
Cdd:cd15125  87 SVFTLTALSADRYKAIVNPMDIQT 110
7tmA_KiSS1R cd15095
KiSS1-derived peptide (kisspeptin) receptor, member of the class A family of ...
15-307 8.89e-03

KiSS1-derived peptide (kisspeptin) receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled KiSS1-derived peptide receptor (GPR54 or kisspeptin receptor) binds the peptide hormone kisspeptin (previously known as metastin), which encoded by the metastasis suppressor gene (KISS1) expressed in various endocrine and reproductive tissues. The KiSS1 receptor is coupled to G proteins of the G(q/11) family, which lead to activation of phospholipase C and increase of intracellular calcium. This signaling cascade plays an important role in reproduction by regulating the secretion of gonadotropin-releasing hormone.


Pssm-ID: 320223 [Multi-domain]  Cd Length: 288  Bit Score: 37.26  E-value: 8.89e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  15 VTAVVSLLTNLSVLLCYCQSSELRShVPGIFILNLSFSNILLAAINMPTTFLGVAENGKPFGDPFCQAASFAETFLTTNA 94
Cdd:cd15095   9 IIFLVGLAGNSLVIYVVSRHREMRT-VTNYYIVNLAVTDLAFLVCCVPFTAALYATPSWVFGDFMCKFVNYMMQVTVQAT 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  95 MLSMAALSVDRWIAVVFPLsysSKMRYRD---ALLMVAYSWLQSLGFSL-----TQLLMNWGGYSHTYasCTVHLEDGSR 166
Cdd:cd15095  88 CLTLTALSVDRYYAIVHPI---RSLRFRTprvAVVVSACIWIVSFLLSIpvaiyYRLEEGYWYGPQTY--CREVWPSKAF 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 167 LAPYAAFTALFHSSSFLLCLLVLCFAYLKVLrvarshCKRIDVITVQtllllvdiHPSVKERCLAQQKKrrqrATKKICI 246
Cdd:cd15095 163 QKAYMIYTVLLTYVIPLAIIAVCYGLILRRL------WRRSVDGNNQ--------SEQLSERALRQKRK----VTRMVIV 224
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 47220248 247 FIGSFVLCFSPYVVTRQLVELIPSVHIPR---YWGVTTKCLTYAKTSTDAFVYCLLRQQYRKVL 307
Cdd:cd15095 225 VVVLFAICWLPNHVLNLWQRFDPNFPETYatyALKIAALCLSYANSAVNPFVYAFMGENFRKYF 288
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
11-307 9.10e-03

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 37.23  E-value: 9.10e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  11 VCVLVTAVVSLLTNLSVLLCYCQSSELRSHvpGIFILNLSFSNILLAAINMPTTFL------------GVAENGKPFGDP 78
Cdd:cd14978   5 YVLPVICIFGIIGNILNLVVLTRKSMRSST--NVYLAALAVSDILVLLSALPLFLLpyiadysssflsYFYAYFLPYIYP 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  79 FCQAASFAETFLTtnamlsmAALSVDRWIAVVFPLSYSSKMRYRDALLMVAYSWLQSLGFSLTQLLMNwggyshtYASCT 158
Cdd:cd14978  83 LANTFQTASVWLT-------VALTVERYIAVCHPLKARTWCTPRRARRVILIIIIFSLLLNLPRFFEY-------EVVEC 148
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 159 VHLEDGSRLAPYAAFTALFHSSsfllcllvlcfaYLKVLRVARSHCKRI---DVITVQTLLLLVDIHPSVKERCLAQ--- 232
Cdd:cd14978 149 ENCNNNSYYYVIPTLLRQNETY------------LLKYYFWLYAIFVVLlpfILLLILNILLIRALRKSKKRRRLLRrrr 216
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248 233 -----QKKRRQRATKKICIFIGSFVLCFSPYVVTRQLVELIPSVHIPRYWGVTTKC---LTYAKTSTDAFVYCLLRQQYR 304
Cdd:cd14978 217 rllsrSQRRERRTTIMLIAVVIVFLICNLPAGILNILEAIFGESFLSPIYQLLGDIsnlLVVLNSAVNFIIYCLFSSKFR 296

                ...
gi 47220248 305 KVL 307
Cdd:cd14978 297 RTF 299
7tmA_C5aR cd15114
complement component 5a anaphylatoxin chemotactic receptors, member of the class A family of ...
36-140 9.75e-03

complement component 5a anaphylatoxin chemotactic receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The anaphylatoxin receptors are a group of G-protein coupled receptors which bind anaphylatoxins; members of this group include C3a receptors and C5a receptors. Anaphylatoxins are also known as complement peptides (C3a, C4a and C5a) that are produced from the activation of the complement system cascade. These complement anaphylatoxins can trigger degranulation of endothelial cells, mast cells, or phagocytes, which induce a local inflammatory response and stimulate smooth muscle cell contraction, histamine release, and increased vascular permeability. They are potent mediators involved in chemotaxis, inflammation, and generation of cytotoxic oxygen-derived free radicals. In humans, a single receptor for C3a (C3AR1) and two receptors for C5a (C5AR1 and C5AR2, also known as C5L2 or GPR77) have been identified, but there is no known receptor for C4a.


Pssm-ID: 320242 [Multi-domain]  Cd Length: 274  Bit Score: 37.00  E-value: 9.75e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47220248  36 ELRSHVPGIFILNLSFSNiLLAAINMPTTFLGVAENGK-PFGDPFCQAASFAETFLTTNAMLSMAALSVDRWIAVVFPLS 114
Cdd:cd15114  28 EAKRSVNAVWFLNLAVAD-LLCCLSLPILAVPIAQDGHwPFGAAACKLLPSLILLNMYASVLLLTAISADRCLLVLRPVW 106
                        90       100
                ....*....|....*....|....*.
gi 47220248 115 YSSKMRYRDALLMVAYSWLQSLGFSL 140
Cdd:cd15114 107 CQNHRRARLAWIACGAAWLLALLLTV 132
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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