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Conserved domains on  [gi|2372265149|emb|CAI5251501|]
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CIH_HP2_G0011900.mRNA.1.CDS.1 [Saccharomyces cerevisiae]

Protein Classification

ferredoxin--NADP reductase domain-containing protein( domain architecture ID 1000996)

ferredoxin--NADP reductase domain-containing protein may serve as an electron transfer protein and supply electrons to P450 systems

CATH:  3.40.50.720|3.50.50.60
EC:  1.18.1.-
Gene Ontology:  GO:0004324|GO:0050661|GO:0071949
PubMed:  10998235
SCOP:  4000129

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN02852 super family cl30539
ferredoxin-NADP+ reductase
 18-486 1.83e-93

ferredoxin-NADP+ reductase


The actual alignment was detected with superfamily member PLN02852:

Pssm-ID: 357415  Cd Length: 491  Bit Score: 292.37  E-value: 1.83e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  18 VSIVGSGPSGFYTAYHLLKKSPiPLNVTIWEKLPVPFGLSRYGVAPDHPEVKNCEETFttcaeefsSPTNQKHKFSFVGG 97
Cdd:PLN02852   29 VCVVGSGPAGFYTADKLLKAHD-GARVDIIERLPTPFGLVRSGVAPDHPETKNVTNQF--------SRVATDDRVSFFGN 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  98 ITIGKEILLKELLDNQDAVILSYGCTGDRKLNIPGElGTKGVFSSREFVNWYNGHPDFAKDKRftdfDWSKVSKVGIIGN 177
Cdd:PLN02852  100 VTLGRDVSLSELRDLYHVVVLAYGAESDRRLGIPGE-DLPGVLSAREFVWWYNGHPDCVHLPP----DLKSSDTAVVLGQ 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149 178 GNVALDITRVLISNQiDEIWEnTDISSLALNLLRRAPVKDVKLIARRDFVHSKFTNKELRELWELEkyGIRGRIDPKFFQ 257
Cdd:PLN02852  175 GNVALDCARILLRPT-DELAS-TDIAEHALEALRGSSVRKVYLVGRRGPVQAACTAKELRELLGLK--NVRVRIKEADLT 250

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149 258 KEMFD--PSKYDRAfNRRVemcseylkpfNERSKKNYKKAPPPSSGYDKFWELDYLKTPLKINR--DDFGAINSLSLCNN 333
Cdd:PLN02852  251 LSPEDeeELKASRP-KRRV----------YELLSKAAAAGKCAPSGGQRELHFVFFRNPTRFLDsgDGNGHVAGVKLERT 319

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149 334 RLNEDNSLQPLKDVNN--IMTYKVDLLITSLGYAGVPMPEFSklsigFDKDH--IANKQGRVLT--SSGEIFPHLYASGW 407
Cdd:PLN02852  320 VLEGAAGSGKQVAVGTgeFEDLPCGLVLKSIGYKSLPVDGLP-----FDHKRgvVPNVHGRVLSsaSGADTEPGLYVVGW 394

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149 408 IRKGSQGVIASTMQDAFEVGDRVIQDL-----------VVSGALSLENSIDLSNIKHTTWKDWERINKKELLRGKKEHKT 476
Cdd:PLN02852  395 LKRGPTGIIGTNLTCAEETVASIAEDLeqgrlrgvaspPKPGRDGLLELLESRGVRVVPFSGWEKIDSAEKEAGRARGKP 474

                         490
                  ....*....|
gi 2372265149 477 RSKFLTFEEL 486
Cdd:PLN02852  475 REKITSIEEM 484
 
Name Accession Description Interval E-value
PLN02852 PLN02852
ferredoxin-NADP+ reductase
 18-486 1.83e-93

ferredoxin-NADP+ reductase


Pssm-ID: 215457  Cd Length: 491  Bit Score: 292.37  E-value: 1.83e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  18 VSIVGSGPSGFYTAYHLLKKSPiPLNVTIWEKLPVPFGLSRYGVAPDHPEVKNCEETFttcaeefsSPTNQKHKFSFVGG 97
Cdd:PLN02852   29 VCVVGSGPAGFYTADKLLKAHD-GARVDIIERLPTPFGLVRSGVAPDHPETKNVTNQF--------SRVATDDRVSFFGN 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  98 ITIGKEILLKELLDNQDAVILSYGCTGDRKLNIPGElGTKGVFSSREFVNWYNGHPDFAKDKRftdfDWSKVSKVGIIGN 177
Cdd:PLN02852  100 VTLGRDVSLSELRDLYHVVVLAYGAESDRRLGIPGE-DLPGVLSAREFVWWYNGHPDCVHLPP----DLKSSDTAVVLGQ 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149 178 GNVALDITRVLISNQiDEIWEnTDISSLALNLLRRAPVKDVKLIARRDFVHSKFTNKELRELWELEkyGIRGRIDPKFFQ 257
Cdd:PLN02852  175 GNVALDCARILLRPT-DELAS-TDIAEHALEALRGSSVRKVYLVGRRGPVQAACTAKELRELLGLK--NVRVRIKEADLT 250

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149 258 KEMFD--PSKYDRAfNRRVemcseylkpfNERSKKNYKKAPPPSSGYDKFWELDYLKTPLKINR--DDFGAINSLSLCNN 333
Cdd:PLN02852  251 LSPEDeeELKASRP-KRRV----------YELLSKAAAAGKCAPSGGQRELHFVFFRNPTRFLDsgDGNGHVAGVKLERT 319

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149 334 RLNEDNSLQPLKDVNN--IMTYKVDLLITSLGYAGVPMPEFSklsigFDKDH--IANKQGRVLT--SSGEIFPHLYASGW 407
Cdd:PLN02852  320 VLEGAAGSGKQVAVGTgeFEDLPCGLVLKSIGYKSLPVDGLP-----FDHKRgvVPNVHGRVLSsaSGADTEPGLYVVGW 394

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149 408 IRKGSQGVIASTMQDAFEVGDRVIQDL-----------VVSGALSLENSIDLSNIKHTTWKDWERINKKELLRGKKEHKT 476
Cdd:PLN02852  395 LKRGPTGIIGTNLTCAEETVASIAEDLeqgrlrgvaspPKPGRDGLLELLESRGVRVVPFSGWEKIDSAEKEAGRARGKP 474

                         490
                  ....*....|
gi 2372265149 477 RSKFLTFEEL 486
Cdd:PLN02852  475 REKITSIEEM 484
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
 14-416 5.19e-27

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 112.92  E-value: 5.19e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  14 NRKTVSIVGSGPSGFYTAYHLLKKSpipLNVTIWEKLPVPFGLSRYGVaPDHP--------EVKNCEETFTTcaeefssp 85
Cdd:COG0493   120 TGKKVAVVGSGPAGLAAAYQLARAG---HEVTVFEALDKPGGLLRYGI-PEFRlpkdvldrEIELIEALGVE-------- 187

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  86 tnqkhkfsFVGGITIGKEILLKELLDNQDAVILSYGCTGDRKLNIPGElGTKGVFSSREFVNWYNGHPDF----AKDKRf 161
Cdd:COG0493   188 --------FRTNVEVGKDITLDELLEEFDAVFLATGAGKPRDLGIPGE-DLKGVHSAMDFLTAVNLGEAPdtilAVGKR- 257

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149 162 tdfdwskvskVGIIGNGNVALDITRVLIsnqideiwentdisslalnllrRAPVKDVKLIARRDfvhskftnkelrelwe 241
Cdd:COG0493   258 ----------VVVIGGGNTAMDCARTAL----------------------RLGAESVTIVYRRT---------------- 289

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149 242 lekygirgridpkffQKEM-FDPSKYDRAFNRRVEMcseylkpfnerskknykkapppssgydkfwelDYLKTPLKINRD 320
Cdd:COG0493   290 ---------------REEMpASKEEVEEALEEGVEF--------------------------------LFLVAPVEIIGD 322

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149 321 DFGAINSLSLCNNRL---NEDNSLQPLKDVNNIMTYKVDLLITSLGYAGVPMPEFSKLSIGFDKDhiankqGRVL----- 392
Cdd:COG0493   323 ENGRVTGLECVRMELgepDESGRRRPVPIEGSEFTLPADLVILAIGQTPDPSGLEEELGLELDKR------GTIVvdeet 396

                         410       420
                  ....*....|....*....|....*.
gi 2372265149 393 --TSSgeifPHLYASGWIRKGSQGVI 416
Cdd:COG0493   397 yqTSL----PGVFAGGDAVRGPSLVV 418
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
20-66 1.78e-05

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 42.52  E-value: 1.78e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 2372265149  20 IVGSGPSGFYTAYHLLKKSpipLNVTIWEKLPVPFGLSRYGVAPDHP 66
Cdd:pfam13450   1 IVGAGLAGLVAAALLAKRG---FRVLVLEKRDRLGGNAYSYRVPGYV 44
 
Name Accession Description Interval E-value
PLN02852 PLN02852
ferredoxin-NADP+ reductase
 18-486 1.83e-93

ferredoxin-NADP+ reductase


Pssm-ID: 215457  Cd Length: 491  Bit Score: 292.37  E-value: 1.83e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  18 VSIVGSGPSGFYTAYHLLKKSPiPLNVTIWEKLPVPFGLSRYGVAPDHPEVKNCEETFttcaeefsSPTNQKHKFSFVGG 97
Cdd:PLN02852   29 VCVVGSGPAGFYTADKLLKAHD-GARVDIIERLPTPFGLVRSGVAPDHPETKNVTNQF--------SRVATDDRVSFFGN 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  98 ITIGKEILLKELLDNQDAVILSYGCTGDRKLNIPGElGTKGVFSSREFVNWYNGHPDFAKDKRftdfDWSKVSKVGIIGN 177
Cdd:PLN02852  100 VTLGRDVSLSELRDLYHVVVLAYGAESDRRLGIPGE-DLPGVLSAREFVWWYNGHPDCVHLPP----DLKSSDTAVVLGQ 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149 178 GNVALDITRVLISNQiDEIWEnTDISSLALNLLRRAPVKDVKLIARRDFVHSKFTNKELRELWELEkyGIRGRIDPKFFQ 257
Cdd:PLN02852  175 GNVALDCARILLRPT-DELAS-TDIAEHALEALRGSSVRKVYLVGRRGPVQAACTAKELRELLGLK--NVRVRIKEADLT 250

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149 258 KEMFD--PSKYDRAfNRRVemcseylkpfNERSKKNYKKAPPPSSGYDKFWELDYLKTPLKINR--DDFGAINSLSLCNN 333
Cdd:PLN02852  251 LSPEDeeELKASRP-KRRV----------YELLSKAAAAGKCAPSGGQRELHFVFFRNPTRFLDsgDGNGHVAGVKLERT 319

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149 334 RLNEDNSLQPLKDVNN--IMTYKVDLLITSLGYAGVPMPEFSklsigFDKDH--IANKQGRVLT--SSGEIFPHLYASGW 407
Cdd:PLN02852  320 VLEGAAGSGKQVAVGTgeFEDLPCGLVLKSIGYKSLPVDGLP-----FDHKRgvVPNVHGRVLSsaSGADTEPGLYVVGW 394

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149 408 IRKGSQGVIASTMQDAFEVGDRVIQDL-----------VVSGALSLENSIDLSNIKHTTWKDWERINKKELLRGKKEHKT 476
Cdd:PLN02852  395 LKRGPTGIIGTNLTCAEETVASIAEDLeqgrlrgvaspPKPGRDGLLELLESRGVRVVPFSGWEKIDSAEKEAGRARGKP 474

                         490
                  ....*....|
gi 2372265149 477 RSKFLTFEEL 486
Cdd:PLN02852  475 REKITSIEEM 484
PTZ00188 PTZ00188
adrenodoxin reductase; Provisional
 1-480 3.96e-38

adrenodoxin reductase; Provisional


Pssm-ID: 240308  Cd Length: 506  Bit Score: 145.80  E-value: 3.96e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149   1 MSFVQIRHISSQINRKTVSIVGSGPSGFYTAYHLLKKSPIplNVTIWEKLPVPFGLSRYGVAPDHPEVKNCEETFTTCae 80
Cdd:PTZ00188   25 LPFTGKCFFTNEAKPFKVGIIGAGPSALYCCKHLLKHERV--KVDIFEKLPNPYGLIRYGVAPDHIHVKNTYKTFDPV-- 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  81 eFSSPtnqkhKFSFVGGITIGKEILLKELLDNQDAVILsygCTGDRKLNIPGELGTK---------------GVFSSREF 145
Cdd:PTZ00188  101 -FLSP-----NYRFFGNVHVGVDLKMEELRNHYNCVIF---CCGASEVSIPIGQQDEdkavsggetnprkqnGIFHARDL 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149 146 VNWYNghpDFAKDKRFTDFD-----WSKVSKVGIIGNGNVALDITRVLISNQIDEIweNTDISSLALNLLRRAPVKDVKL 220
Cdd:PTZ00188  172 IYFYN---NMYNDVRCKAVDnylnsFENFTTSIIIGNGNVSLDIARILIKSPDDLS--KTDISSDYLKVIKRHNIKHIYI 246

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149 221 IARRDFVHSKFTNKELRELWELEKYGIrgridpkFFQKEMFDPSKYDRAFNRRVEMCSEYLKPFnERSKKNYKKAPPPSS 300
Cdd:PTZ00188  247 VGRRGFWQSSFTNAELRELISLENTKV-------ILSKKNYDLCCHLKSDEENTNMKKRQHEIF-QKMVKNYEEVEKNKE 318

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149 301 GYDKFWELDYL-KTPLKINRDDFGAINSLSLCNNRlNEDNSLQPLKDVNNIMTykvDLLITSLGYAGVPMPE-FSKLSIG 378
Cdd:PTZ00188  319 FYKTYKIIEFIfYFEIRQIRPIDGAMKNVELELNK-NVPMSFSSFKENKVLVT---PLVIFATGFKKSNFAEnLYNQSVQ 394

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149 379 FDKDHIANKQGRVltssgeifphlYASGWIRKGSQGVIASTMQDAfEVGDRVIQDLVVSGALSLENSIDL----SNIKHT 454
Cdd:PTZ00188  395 MFKEDIGQHKFAI-----------FKAGWFDKGPKGNIASQILNS-KNSTHLVLNFLQKVDIFFDNDISSllkeKQIPYV 462

                         490       500
                  ....*....|....*....|....*.
gi 2372265149 455 TWKDWERINKKELLRGKKEHKTRSKF 480
Cdd:PTZ00188  463 SFDDWTYLHQLEKQMGAQQNKIAQKF 488
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
 14-416 5.19e-27

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 112.92  E-value: 5.19e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  14 NRKTVSIVGSGPSGFYTAYHLLKKSpipLNVTIWEKLPVPFGLSRYGVaPDHP--------EVKNCEETFTTcaeefssp 85
Cdd:COG0493   120 TGKKVAVVGSGPAGLAAAYQLARAG---HEVTVFEALDKPGGLLRYGI-PEFRlpkdvldrEIELIEALGVE-------- 187

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  86 tnqkhkfsFVGGITIGKEILLKELLDNQDAVILSYGCTGDRKLNIPGElGTKGVFSSREFVNWYNGHPDF----AKDKRf 161
Cdd:COG0493   188 --------FRTNVEVGKDITLDELLEEFDAVFLATGAGKPRDLGIPGE-DLKGVHSAMDFLTAVNLGEAPdtilAVGKR- 257

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149 162 tdfdwskvskVGIIGNGNVALDITRVLIsnqideiwentdisslalnllrRAPVKDVKLIARRDfvhskftnkelrelwe 241
Cdd:COG0493   258 ----------VVVIGGGNTAMDCARTAL----------------------RLGAESVTIVYRRT---------------- 289

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149 242 lekygirgridpkffQKEM-FDPSKYDRAFNRRVEMcseylkpfnerskknykkapppssgydkfwelDYLKTPLKINRD 320
Cdd:COG0493   290 ---------------REEMpASKEEVEEALEEGVEF--------------------------------LFLVAPVEIIGD 322

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149 321 DFGAINSLSLCNNRL---NEDNSLQPLKDVNNIMTYKVDLLITSLGYAGVPMPEFSKLSIGFDKDhiankqGRVL----- 392
Cdd:COG0493   323 ENGRVTGLECVRMELgepDESGRRRPVPIEGSEFTLPADLVILAIGQTPDPSGLEEELGLELDKR------GTIVvdeet 396

                         410       420
                  ....*....|....*....|....*.
gi 2372265149 393 --TSSgeifPHLYASGWIRKGSQGVI 416
Cdd:COG0493   397 yqTSL----PGVFAGGDAVRGPSLVV 418
PRK11749 PRK11749
dihydropyrimidine dehydrogenase subunit A; Provisional
 16-183 1.54e-15

dihydropyrimidine dehydrogenase subunit A; Provisional


Pssm-ID: 236967 [Multi-domain]  Cd Length: 457  Bit Score: 78.68  E-value: 1.54e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  16 KTVSIVGSGPSGFYTAYHLLKKSpipLNVTIWEKLPVPFGLSRYGVA----PDH---PEVKNCEE---TFTTcaeefssp 85
Cdd:PRK11749  141 KKVAVIGAGPAGLTAAHRLARKG---YDVTIFEARDKAGGLLRYGIPefrlPKDivdREVERLLKlgvEIRT-------- 209

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  86 tnqkhkfsfvgGITIGKEILLKELLDNQDAVILSYGCTGDRKLNIPGElGTKGVFSSREFVNwyngHPDFAKDkrftDFD 165
Cdd:PRK11749  210 -----------NTEVGRDITLDELRAGYDAVFIGTGAGLPRFLGIPGE-NLGGVYSAVDFLT----RVNQAVA----DYD 269

                         170
                  ....*....|....*...
gi 2372265149 166 WSKVSKVGIIGNGNVALD 183
Cdd:PRK11749  270 LPVGKRVVVIGGGNTAMD 287
PRK12771 PRK12771
putative glutamate synthase (NADPH) small subunit; Provisional
 16-225 1.44e-13

putative glutamate synthase (NADPH) small subunit; Provisional


Pssm-ID: 237198 [Multi-domain]  Cd Length: 564  Bit Score: 72.99  E-value: 1.44e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  16 KTVSIVGSGPSGFYTAYHLLKKSPiplNVTIWEKLPVPFGLSRYGVaPDH--P------EVKNCEET--FTTCaeefssp 85
Cdd:PRK12771  138 KRVAVIGGGPAGLSAAYHLRRMGH---AVTIFEAGPKLGGMMRYGI-PAYrlPrevldaEIQRILDLgvEVRL------- 206

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  86 tnqkhkfsfvgGITIGKEILLKELLDNQDAVILSYGCTGDRKLNIPGElGTKGVFSSREFVNWYN-GHPDFAkDKRftdf 164
Cdd:PRK12771  207 -----------GVRVGEDITLEQLEGEFDAVFVAIGAQLGKRLPIPGE-DAAGVLDAVDFLRAVGeGEPPFL-GKR---- 269

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2372265149 165 dwskvskVGIIGNGNVALDITRVlisnqideiwentdisslAlnllRRAPVKDVKLIARRD 225
Cdd:PRK12771  270 -------VVVIGGGNTAMDAART------------------A----RRLGAEEVTIVYRRT 301
PRK12770 PRK12770
putative glutamate synthase subunit beta; Provisional
 14-185 5.47e-13

putative glutamate synthase subunit beta; Provisional


Pssm-ID: 237197 [Multi-domain]  Cd Length: 352  Bit Score: 70.02  E-value: 5.47e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  14 NRKTVSIVGSGPSGFYTAYHLLKKSpipLNVTIWEKLPVPFGLSRYGVaPDH--PE------VKNCEE--------TFTT 77
Cdd:PRK12770   17 TGKKVAIIGAGPAGLAAAGYLACLG---YEVHVYDKLPEPGGLMLFGI-PEFriPIervregVKELEEagvvfhtrTKVC 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  78 CaeefSSPTNQKHKFSFVGGItigkeILLKELLDNQDAVILSYGCTGDRKLNIPGElGTKGVFSSREFVNWYNGHpdfak 157
Cdd:PRK12770   93 C----GEPLHEEEGDEFVERI-----VSLEELVKKYDAVLIATGTWKSRKLGIPGE-DLPGVYSALEYLFRIRAA----- 157

                         170       180       190
                  ....*....|....*....|....*....|...
gi 2372265149 158 dkRFTDFDWSKV-----SKVGIIGNGNVALDIT 185
Cdd:PRK12770  158 --KLGYLPWEKVppvegKKVVVVGAGLTAVDAA 188
PRK13984 PRK13984
putative oxidoreductase; Provisional
 16-205 9.97e-13

putative oxidoreductase; Provisional


Pssm-ID: 172486 [Multi-domain]  Cd Length: 604  Bit Score: 70.18  E-value: 9.97e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  16 KTVSIVGSGPSGFYTAYHLlkkSPIPLNVTIWEKLPVPFGLSRYGVapdhPEVKNCEETFTTCAEEFSSptnqkHKFSFV 95
Cdd:PRK13984  284 KKVAIVGSGPAGLSAAYFL---ATMGYEVTVYESLSKPGGVMRYGI----PSYRLPDEALDKDIAFIEA-----LGVKIH 351

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  96 GGITIGKEILLKELLDNQDAVILSYGCTGDRKLNIPGelgtkgvfssrefvnwyNGHPDFAKD----KRFTDFDWSKVSK 171
Cdd:PRK13984  352 LNTRVGKDIPLEELREKHDAVFLSTGFTLGRSTRIPG-----------------TDHPDVIQAlpllREIRDYLRGEGPK 414

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 2372265149 172 VGI------IGNGNVALDITRVLISNQIDEIWE-NTDISSL 205
Cdd:PRK13984  415 PKIprslvvIGGGNVAMDIARSMARLQKMEYGEvNVKVTSL 455
PRK12814 PRK12814
putative NADPH-dependent glutamate synthase small subunit; Provisional
 16-186 1.93e-12

putative NADPH-dependent glutamate synthase small subunit; Provisional


Pssm-ID: 139246 [Multi-domain]  Cd Length: 652  Bit Score: 69.37  E-value: 1.93e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  16 KTVSIVGSGPSGFYTAYHLLKKSPiplNVTIWEKLPVPFGLSRYGVapdhPEVKNCEETFTTCAEEFssptnQKHKFSFV 95
Cdd:PRK12814  194 KKVAIIGAGPAGLTAAYYLLRKGH---DVTIFDANEQAGGMMRYGI----PRFRLPESVIDADIAPL-----RAMGAEFR 261

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  96 GGITIGKEILLKELLDNQDAVILSYGCTGDRKLNIPGElGTKGVFSSREFVNwynghpDFAKDKRFTdfdwsKVSKVGII 175
Cdd:PRK12814  262 FNTVFGRDITLEELQKEFDAVLLAVGAQKASKMGIPGE-ELPGVISGIDFLR------NVALGTALH-----PGKKVVVI 329

                         170
                  ....*....|.
gi 2372265149 176 GNGNVALDITR 186
Cdd:PRK12814  330 GGGNTAIDAAR 340
PRK12831 PRK12831
putative oxidoreductase; Provisional
 14-186 7.28e-12

putative oxidoreductase; Provisional


Pssm-ID: 183780 [Multi-domain]  Cd Length: 464  Bit Score: 67.35  E-value: 7.28e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  14 NRKTVSIVGSGPSGFYTAYHLLKKSpipLNVTIWEKLPVPFGLSRYGVapdhPEVKNCEETFTtcAEEFSSPtnQKHKFS 93
Cdd:PRK12831  139 KGKKVAVIGSGPAGLTCAGDLAKMG---YDVTIFEALHEPGGVLVYGI----PEFRLPKETVV--KKEIENI--KKLGVK 207

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  94 FVGGITIGKEILLKELLDNQ--DAVILSYGCTGDRKLNIPGELgTKGVFSSREFVNWYNGHPDFaKDKRFTDFDWSKvsK 171
Cdd:PRK12831  208 IETNVVVGKTVTIDELLEEEgfDAVFIGSGAGLPKFMGIPGEN-LNGVFSANEFLTRVNLMKAY-KPEYDTPIKVGK--K 283

                         170
                  ....*....|....*
gi 2372265149 172 VGIIGNGNVALDITR 186
Cdd:PRK12831  284 VAVVGGGNVAMDAAR 298
PRK12778 PRK12778
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate ...
 14-186 6.21e-10

bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase;


Pssm-ID: 237200 [Multi-domain]  Cd Length: 752  Bit Score: 61.68  E-value: 6.21e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  14 NRKTVSIVGSGPSGFYTAYHLLKKSpipLNVTIWEKLPVPFGLSRYGVApdhpevknceetfttcaeEFSSPTN------ 87
Cdd:PRK12778  430 NGKKVAVIGSGPAGLSFAGDLAKRG---YDVTVFEALHEIGGVLKYGIP------------------EFRLPKKivdvei 488

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  88 ---QKHKFSFVGGITIGKEILLKELLDNQ-DAVILSYGCTGDRKLNIPGElGTKGVFSSREFVNWYNGHpDFAKDKRFTD 163
Cdd:PRK12778  489 enlKKLGVKFETDVIVGKTITIEELEEEGfKGIFIASGAGLPNFMNIPGE-NSNGVMSSNEYLTRVNLM-DAASPDSDTP 566

                         170       180
                  ....*....|....*....|...
gi 2372265149 164 FDWSKvsKVGIIGNGNVALDITR 186
Cdd:PRK12778  567 IKFGK--KVAVVGGGNTAMDSAR 587
PRK12775 PRK12775
putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin ...
 18-187 1.69e-09

putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional


Pssm-ID: 183738 [Multi-domain]  Cd Length: 1006  Bit Score: 60.34  E-value: 1.69e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149   18 VSIVGSGPSGFYTAYHLLKKSpipLNVTIWEKLPVPFGLSRYGVapdhPEVKNCEETFTtcaEEFSSPTNQKHKFSfvGG 97
Cdd:PRK12775   433 VAICGSGPAGLAAAADLVKYG---VDVTVYEALHVVGGVLQYGI----PSFRLPRDIID---REVQRLVDIGVKIE--TN 500

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149   98 ITIGKEILLKELLDNQ--DAVILSYGCTGDRKLNIPGELGTKgVFSSREFVNWYN--GHPDFAkdkrFTDFDWSKVSKVG 173
Cdd:PRK12775   501 KVIGKTFTVPQLMNDKgfDAVFLGVGAGAPTFLGIPGEFAGQ-VYSANEFLTRVNlmGGDKFP----FLDTPISLGKSVV 575

                          170
                   ....*....|....
gi 2372265149  174 IIGNGNVALDITRV 187
Cdd:PRK12775   576 VIGAGNTAMDCLRV 589
gltD PRK12810
glutamate synthase subunit beta; Reviewed
 16-183 5.97e-09

glutamate synthase subunit beta; Reviewed


Pssm-ID: 237213 [Multi-domain]  Cd Length: 471  Bit Score: 58.25  E-value: 5.97e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  16 KTVSIVGSGPSGFYTAYHLLKKSpipLNVTIWEKLPVPFGLSRYGVaPD--------HPEVKNCEETFTTcaeefssptn 87
Cdd:PRK12810  144 KKVAVVGSGPAGLAAADQLARAG---HKVTVFERADRIGGLLRYGI-PDfklekeviDRRIELMEAEGIE---------- 209

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  88 qkhkfsFVGGITIGKEILLKELLDNQDAVILSYGCTGDRKLNIPG-ELgtKGVFSSREFV--------NWYNGHPDFAKD 158
Cdd:PRK12810  210 ------FRTNVEVGKDITAEELLAEYDAVFLGTGAYKPRDLGIPGrDL--DGVHFAMDFLiqntrrvlGDETEPFISAKG 281

                         170       180
                  ....*....|....*....|....*
gi 2372265149 159 KRftdfdwskvskVGIIGNGNVALD 183
Cdd:PRK12810  282 KH-----------VVVIGGGDTGMD 295
PRK12779 PRK12779
putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; ...
 14-186 2.38e-07

putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional


Pssm-ID: 183740 [Multi-domain]  Cd Length: 944  Bit Score: 53.68  E-value: 2.38e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  14 NRKTVSIVGSGPSGFYTAYhLLKKSPIPlnVTIWEKLPVPFGLSRYGVapdhPEVKNCEETFTTCAEEFSSPTNQkhkfs 93
Cdd:PRK12779  305 VKPPIAVVGSGPSGLINAY-LLAVEGFP--VTVFEAFHDLGGVLRYGI----PEFRLPNQLIDDVVEKIKLLGGR----- 372

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  94 FVGGITIGKEILLKELLDNQDA-VILSYGCTGDRKLNIPGElGTKGVFSSREF---VNWYNGHpdfaKDKRFTDFDWSKV 169
Cdd:PRK12779  373 FVKNFVVGKTATLEDLKAAGFWkIFVGTGAGLPTFMNVPGE-HLLGVMSANEFltrVNLMRGL----DDDYETPLPEVKG 447

                         170
                  ....*....|....*..
gi 2372265149 170 SKVGIIGNGNVALDITR 186
Cdd:PRK12779  448 KEVFVIGGGNTAMDAAR 464
YdhS COG4529
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
12-62 8.90e-06

Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];


Pssm-ID: 443597 [Multi-domain]  Cd Length: 466  Bit Score: 48.03  E-value: 8.90e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2372265149  12 QINRKTVSIVGSGPSGFYTAYHLLKKSPIPLNVTIWEKLPvPFGLsryGVA 62
Cdd:COG4529     2 TGARKRIAIIGGGASGTALAIHLLRRAPEPLRITLFEPRP-ELGR---GVA 48
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
114-239 1.26e-05

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 47.04  E-value: 1.26e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149 114 DAVILSYGCtGDRKLNIPGE--LGTKGVFssrefvnwYNGHPD--FAKDKRftdfdwskvskVGIIGNGNVALDitrvli 189
Cdd:COG0492   102 KAVIIATGA-GPRKLGLPGEeeFEGRGVS--------YCATCDgfFFRGKD-----------VVVVGGGDSALE------ 155

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2372265149 190 snqideiWentdisslALNLLRRApvKDVKLIARRD-FVHSKFTNKELREL 239
Cdd:COG0492   156 -------E--------ALYLTKFA--SKVTLIHRRDeLRASKILVERLRAN 189
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
20-66 1.78e-05

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 42.52  E-value: 1.78e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 2372265149  20 IVGSGPSGFYTAYHLLKKSpipLNVTIWEKLPVPFGLSRYGVAPDHP 66
Cdd:pfam13450   1 IVGAGLAGLVAAALLAKRG---FRVLVLEKRDRLGGNAYSYRVPGYV 44
PRK12809 PRK12809
putative oxidoreductase Fe-S binding subunit; Reviewed
 18-189 2.14e-05

putative oxidoreductase Fe-S binding subunit; Reviewed


Pssm-ID: 183762 [Multi-domain]  Cd Length: 639  Bit Score: 46.94  E-value: 2.14e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  18 VSIVGSGPSGFYTAYHLLKKSpipLNVTIWEKLPVPFGLSRYGVAP---DHPEVKNCEETFTTCAEEFSspTNQKhkfsf 94
Cdd:PRK12809  313 VAVIGAGPAGLGCADILARAG---VQVDVFDRHPEIGGMLTFGIPPfklDKTVLSQRREIFTAMGIDFH--LNCE----- 382

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2372265149  95 vggitIGKEILLKELLDNQDAVILSYGCTGDRKLNIPGElGTKGVFSSREFVNWYN----GHPDfAKDKRFTDFdwsKVS 170
Cdd:PRK12809  383 -----IGRDITFSDLTSEYDAVFIGVGTYGMMRADLPHE-DAPGVIQALPFLTAHTrqlmGLPE-SEEYPLTDV---EGK 452

                         170
                  ....*....|....*....
gi 2372265149 171 KVGIIGNGNVALDITRVLI 189
Cdd:PRK12809  453 RVVVLGGGDTTMDCLRTSI 471
PRK09897 PRK09897
FAD-NAD(P)-binding protein;
16-49 8.10e-05

FAD-NAD(P)-binding protein;


Pssm-ID: 182134 [Multi-domain]  Cd Length: 534  Bit Score: 45.11  E-value: 8.10e-05
                          10        20        30
                  ....*....|....*....|....*....|....
gi 2372265149  16 KTVSIVGSGPSGFYTAYHLLKKSPiPLNVTIWEK 49
Cdd:PRK09897    2 KKIAIVGAGPTGIYTFFSLLQQQT-PLSISIFEQ 34
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
 15-58 1.62e-03

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 40.97  E-value: 1.62e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 2372265149  15 RKTVSIVGSGPSGFYTAYHLLKKspiPLNVTIWEKLPVPFGLSR 58
Cdd:COG1232     1 MKRVAVIGGGIAGLTAAYRLAKA---GHEVTVLEASDRVGGLIR 41
NAD_binding_9 pfam13454
FAD-NAD(P)-binding;
20-55 4.45e-03

FAD-NAD(P)-binding;


Pssm-ID: 433222 [Multi-domain]  Cd Length: 155  Bit Score: 37.64  E-value: 4.45e-03
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 2372265149  20 IVGSGPSGFYTAYHLLKKSP-IPLNVTIWEklPVPFG 55
Cdd:pfam13454   2 IVGGGPSGLALLERLLARAPkRPLEITLFD--PSPPG 36
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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