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Conserved domains on  [gi|133911725|emb|CAM01838|]
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Mn(2+) transport protein, NramP family [Saccharopolyspora erythraea NRRL 2338]

Protein Classification

NRAMP family divalent metal transporter( domain architecture ID 10004887)

NRAMP family divalent metal cation transporter is a natural resistance-associated macrophage (NRAMP) family protein defined by a conserved hydrophobic core of ten transmembrane domains and may transport Fe2+, Mn2+ and Zn2+, among others

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MntH COG1914
Mn2+ or Fe2+ transporter, NRAMP family [Inorganic ion transport and metabolism];
2-399 3.93e-76

Mn2+ or Fe2+ transporter, NRAMP family [Inorganic ion transport and metabolism];


:

Pssm-ID: 441518 [Multi-domain]  Cd Length: 405  Bit Score: 241.58  E-value: 3.93e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725   2 RLLALMGPAFIVGAWQFGPGNLTSAVQAGSRFGYSLIWVIAVSTVLMLVYADMSIRIALVSRGSVVETIKEQLGRWSGRI 81
Cdd:COG1914    9 RLLALLGPGLLVAAAYIDPGNLATYTQAGAQFGYSLLWVILLSNLLAIVLQEMSARLGIVTGKGLAELIRERLGRWLGWL 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725  82 AGFGVFAITLMFSVGNAVGSGLGLSLVFGGSPTWWTPTCTAVVVAILFARRlYTVIEKLVLVLVAIMAVSFVATAIVTRP 161
Cdd:COG1914   89 LLILLELANLATDAAEIAGAALALNLLFGIPLLLGAVITALLAILLLLRGG-YRRLERVLKVLVALMLLAFVVTAFLAHP 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725 162 DWGAAATGSVV-PVVPAGVGLLIVALVGTNFSINAAFYAGYASRERGLRREQYRQTTLVDTIPGIVAPGIMTALVITAAA 240
Cdd:COG1914  168 DWGEVAKGTLVpSLPGSGSLLLAIAILGATVMPYNLFLHSSLVQEKGWTGKEDLRYARLDTVVGMLLAGLVNLAILLLAA 247
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725 241 AVLPGAgGEEGASLKQFSAVLTPIAGEAGQTVFSLGFTGAAISAMIANATAGGTLLSDGLGYGNRLSSWKVRGGILGVLG 320
Cdd:COG1914  248 AVLHGT-GIGVDSAAQAAQALEPLLGEWAAILFALGLLAAGFSSTITATLAGAYVMAGFLGWRIGLWLRRFYLVTRLLTL 326
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 133911725 321 FGALVtVLAHGASPIQLIIAAQALTVVVVPILALLMLILANRSALMGDLRNTWWQNVLSAIGLIAIAAVCYQLIVTAFF 399
Cdd:COG1914  327 IGALI-VLLLGGDPVKLLVLSQVLNGLLLPFALIPLLLLTNDKDLMGEYRNGRWLNVLGWLIVLLIVVLNLYLLVSTLF 404
 
Name Accession Description Interval E-value
MntH COG1914
Mn2+ or Fe2+ transporter, NRAMP family [Inorganic ion transport and metabolism];
2-399 3.93e-76

Mn2+ or Fe2+ transporter, NRAMP family [Inorganic ion transport and metabolism];


Pssm-ID: 441518 [Multi-domain]  Cd Length: 405  Bit Score: 241.58  E-value: 3.93e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725   2 RLLALMGPAFIVGAWQFGPGNLTSAVQAGSRFGYSLIWVIAVSTVLMLVYADMSIRIALVSRGSVVETIKEQLGRWSGRI 81
Cdd:COG1914    9 RLLALLGPGLLVAAAYIDPGNLATYTQAGAQFGYSLLWVILLSNLLAIVLQEMSARLGIVTGKGLAELIRERLGRWLGWL 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725  82 AGFGVFAITLMFSVGNAVGSGLGLSLVFGGSPTWWTPTCTAVVVAILFARRlYTVIEKLVLVLVAIMAVSFVATAIVTRP 161
Cdd:COG1914   89 LLILLELANLATDAAEIAGAALALNLLFGIPLLLGAVITALLAILLLLRGG-YRRLERVLKVLVALMLLAFVVTAFLAHP 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725 162 DWGAAATGSVV-PVVPAGVGLLIVALVGTNFSINAAFYAGYASRERGLRREQYRQTTLVDTIPGIVAPGIMTALVITAAA 240
Cdd:COG1914  168 DWGEVAKGTLVpSLPGSGSLLLAIAILGATVMPYNLFLHSSLVQEKGWTGKEDLRYARLDTVVGMLLAGLVNLAILLLAA 247
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725 241 AVLPGAgGEEGASLKQFSAVLTPIAGEAGQTVFSLGFTGAAISAMIANATAGGTLLSDGLGYGNRLSSWKVRGGILGVLG 320
Cdd:COG1914  248 AVLHGT-GIGVDSAAQAAQALEPLLGEWAAILFALGLLAAGFSSTITATLAGAYVMAGFLGWRIGLWLRRFYLVTRLLTL 326
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 133911725 321 FGALVtVLAHGASPIQLIIAAQALTVVVVPILALLMLILANRSALMGDLRNTWWQNVLSAIGLIAIAAVCYQLIVTAFF 399
Cdd:COG1914  327 IGALI-VLLLGGDPVKLLVLSQVLNGLLLPFALIPLLLLTNDKDLMGEYRNGRWLNVLGWLIVLLIVVLNLYLLVSTLF 404
Nramp pfam01566
Natural resistance-associated macrophage protein; The natural resistance-associated macrophage ...
23-373 1.13e-63

Natural resistance-associated macrophage protein; The natural resistance-associated macrophage protein (NRAMP) family consists of Nramp1, Nramp2, and yeast proteins Smf1 and Smf2. The NRAMP family is a novel family of functional related proteins defined by a conserved hydrophobic core of ten transmembrane domains. This family of membrane proteins are divalent cation transporters. Nramp1 is an integral membrane protein expressed exclusively in cells of the immune system and is recruited to the membrane of a phagosome upon phagocytosis. By controlling divalent cation concentrations Nramp1 may regulate the interphagosomal replication of bacteria. Mutations in Nramp1 may genetically predispose an individual to susceptibility to diseases including leprosy and tuberculosis conversely this might however provide protection form rheumatoid arthritis. Nramp2 is a multiple divalent cation transporter for Fe2+, Mn2+ and Zn2+ amongst others it is expressed at high levels in the intestine; and is major transferrin-independent iron uptake system in mammals. The yeast proteins Smf1 and Smf2 may also transport divalent cations.


Pssm-ID: 426327 [Multi-domain]  Cd Length: 356  Bit Score: 207.80  E-value: 1.13e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725   23 LTSAVQAGSRFGYSLIWVIAVSTVLMLVYADMSIRIALVSRGSVVETIKEQLGRWSGRIAGFGVFAITLMFSVGNAVGSG 102
Cdd:pfam01566   1 WATDIQAGARFGYSLLWVLLLSNLMAILLQELSARLGLVTGKGLAELIRERFPRKVSWLLWILAELAIIATDLAEVIGGA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725  103 LGLSLVFGGSPTWWTPTCTAVVVAILFARRLYTVIEKLVLVLVAIMAVSFVATAIVTRPDWGAAATGSVV-PVVPAGVGL 181
Cdd:pfam01566  81 IALNLLFGIPLWIGVLITAVLVLLLLFQKGGYRKLEKVIIGLVLVIALSFIAELFLVKPDWGAVAAGLVVpSFPGSGSLL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725  182 LIVALVGTNFSINAAFYAGYASRERGL------RREQYRQTTLvDTIPGIVAPGIMTALVITAAAAVLPGAGGEEGASLK 255
Cdd:pfam01566 161 LAVGILGATVMPHNLFLHSSLVQERGWtidrdeEDEALRYSRI-DTIIALIVAGLVNAAILIVAAAAFHGSGGIDVATLA 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725  256 QFSAVLTPIAGEAGQTVFSLGFTGAAISAMIANATAGGTLLSDGLGYgnRLSSWKVRGGILGVLGFGALVTVLAHGA-SP 334
Cdd:pfam01566 240 DAAAALEPLLGKAAAVLFALGLLAAGLSSTITGTLAGQYVMEGFLGW--RIPLWLRRLITRAIAFYPALAVILLGGApGV 317
                         330       340       350
                  ....*....|....*....|....*....|....*....
gi 133911725  335 IQLIIAAQALTVVVVPILALLMLILANRSALMGDLRNTW 373
Cdd:pfam01566 318 VQLLVLSQVVLSLQLPFALIPLLLLTSDRKLMGEFVNSR 356
PRK00701 PRK00701
divalent metal cation transporter MntH;
2-399 1.03e-21

divalent metal cation transporter MntH;


Pssm-ID: 234815  Cd Length: 439  Bit Score: 96.06  E-value: 1.03e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725   2 RLLALMGPAFIVGAWQFGPGNLTSAVQAGSRFGYSLIWVIAVSTVLMLVYADMSIRIALVSRGSVVETIKEQLGRWSGR- 80
Cdd:PRK00701  32 RLLAFLGPAFLVAVGYMDPGNWATNIQGGSQFGYTLLWVILLSNLMAMLLQSLSAKLGIATGRDLAQACRDRYPRPVVWf 111
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725  81 ---IAGFGVFAITLmfsvGNAVGSGLGLSLVFGGSPTWWTPTCTAVVVAILF-ARRLYTVIEKLVLVLVAIMAVSFVATA 156
Cdd:PRK00701 112 lwiQAELAIMATDL----AEVIGAAIALKLLFGIPLLQGALITALDTFLILMlQRRGFRPLEAIIGGLLLVIAAAFIVEL 187
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725 157 IVTRPDWGAAATG---SVVPVVPAGVGLLIVALVG-TNFSINAAFYAG-----YASRERGLRREQYRQTTLVDTIPGIVA 227
Cdd:PRK00701 188 FLAQPDWAAVLKGfipSSEILPNPEALYLAAGILGaTVMPHNLYLHSSlvqtrVVGRTGEEKREALRFTRIDSAIALTIA 267
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725 228 PGIMTALVITAAAAvLPGAGGEEGASLKQFSAVLTPIAGEAGQTVFSLGFTGAAISAMIANATAGGTLLSDGLGYgnRLS 307
Cdd:PRK00701 268 GFVNAAMLILAAAA-FHASGHTDVADIEDAYLLLSPLLGAAAATLFGIALLASGLSSTVVGTLAGQIVMEGFLRL--RIP 344
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725 308 SWkVRGGILGVLGFG--ALVTVLAHGASPIQLIIAAQALTVVVVPILALLMLILANRSALMGDLRNTWWQNVLSAIGLIA 385
Cdd:PRK00701 345 LW-VRRLITRGLAMVpaLIVILLGGELDPTRLLVLSQVVLSFGLPFALIPLLLFTSDRKLMGELVNPRWVKIIAWIIAVL 423
                        410
                 ....*....|....
gi 133911725 386 IAAVCYQLIVTAFF 399
Cdd:PRK00701 424 IVALNIYLLYQTFT 437
nramp TIGR01197
NRAMP (natural resistance-associated macrophage protein) metal ion transporters; This model ...
2-165 1.47e-13

NRAMP (natural resistance-associated macrophage protein) metal ion transporters; This model describes the Nramp metal ion transporter family. Historically, in mammals these proteins have been functionally characterized as proteins involved in the host pathogen resistance, hence the name - NRAMP. At least two isoforms Nramp1 and Nramp2 have been identified. However the exact mechanism of pathogen resistance was unclear, until it was demonstrated by expression cloning and electrophysiological techniques that this protein was a metal ion transporter. It was also independently demonstrated that a microcytic anemia (mk) locus in mouse, encodes a metal ion transporter (DCT1 or Nramp2). The transporter has a broad range of substrate specificity that include Fe+2, Zn+2, Mn+2, Co+2, Cd+2, Cu+2, Ni+2 and Pb+2. The uptake of these metal ions is coupled to proton symport. Metal ions are essential cofactors in a number of biological process including, oxidative phosphorylation, gene regulation and metal ion homeostasis. Nramp1 could confer resistance to infection in one of the two ways. (1) The uptake of Fe+2 can produce toxic hydroxyl radicals via Fenton reaction killing the pathogens in phagosomes or (2) Deplete the metal ion pools in the phagosome and deprive the pathogens of metal ions, which is critical for its survival. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 162246  Cd Length: 390  Bit Score: 71.68  E-value: 1.47e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725    2 RLLALMGPAFIVGAWQFGPGNLTSAVQAGSRFGYSLIWVIAVSTVLMLVYADMSIRIALVSRGSVVETIKEQLGRWSGRI 81
Cdd:TIGR01197   2 KLWAFIGPGFLMSIAYIDPGNYSTDLQAGAAAGYKLLWVLLLSNIMALLLQRLCARLGVVTGLDLAEVCREHYPKVPRIT 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725   82 AGFGVFAITLMFSVGNAVGSGLGLSLVFgGSPTWWTPTCTAV-VVAILFA-RRLYTVIEKLVLVLVAIMAVSFVATAIVT 159
Cdd:TIGR01197  82 LWILAELAIIATDMAEVIGTAIALNLLS-HIPLWGGVLITIVdVFLFLFLdKPGLRILEAFVALLVTIVAICFAYELFYA 160

                  ....*.
gi 133911725  160 RPDWGA 165
Cdd:TIGR01197 161 KPGQVK 166
Nramp_1 NF037982
Nramp family divalent metal transporter; Nramp (natural resistance-associated macrophage ...
8-349 3.91e-13

Nramp family divalent metal transporter; Nramp (natural resistance-associated macrophage protein) family divalent metal transporters are widely conserved divalent metal transporters, which enables manganese import in bacteria and dietary iron uptake in mammals.


Pssm-ID: 468301  Cd Length: 404  Bit Score: 70.47  E-value: 3.91e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725   8 GPAFIVGAWQFGPGNLTSAVQAGSRFGYSLIWVIAVSTVLMLVYADMSIRIALVSRGSVVETIKEqLGRWSGRIagFGVF 87
Cdd:NF037982   1 GPGVIAAAAGVGSGEFILWPYIGSQFGYTLLWAALVGVLMQMFLNMEIERYTLATGETLFTGFRR-LWKPWGWF--FWVQ 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725  88 AITLMFSVGNAVGSGLGLSLVFGGSPT--WWTPTCTAVVVAIL-FARRLYTVIEKLVLVLVA--IMAVSFVATAIVTRPD 162
Cdd:NF037982  78 AELVNIWPGWATFSAAALTYLLGFGIPilWIAIATLVLIGLILtLAPVVYRALEKVIGVKVGllVVFVAVAVVAVIAAPD 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725 163 WGAAATGSVVPVVPAGVGLLIV----ALVGTNFSIN------------------------------AAFYAGYASRERGL 208
Cdd:NF037982 158 WGALGAGVLFPQLPDGDLFAVLlgaiAFAGAGGAQNmvqsnwlrdkgfgmgshvprltsrvtgeteAEPSTGYMFPTDEE 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725 209 RREQYRQTTLVDTIPGIVAPGIMTALVITA----AAAVLPGAG--GEEGASLKQFSAVLTPIAGEAGQTVFSLGFTGAAI 282
Cdd:NF037982 238 NLARWRGWWRVANFDQLIAFWLIGFINISMlsvlAAATFFGSGslANDVAFLDVEGQTLAALVGPWFGTLFWLGGAASGL 317
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 133911725 283 SAMIANATAGGTLLSDG-----LGYGNRLSSWKVRGGIL-GVLGFGALVtVLAHGASPIQLIIAAQALTVVVV 349
Cdd:NF037982 318 SSALGIVDYVSRLAADVvkqgfLGGASRWSESRIYLYLVwGLTMFGIVI-LLAGGDQPLVLLVISAVLLGFGM 389
 
Name Accession Description Interval E-value
MntH COG1914
Mn2+ or Fe2+ transporter, NRAMP family [Inorganic ion transport and metabolism];
2-399 3.93e-76

Mn2+ or Fe2+ transporter, NRAMP family [Inorganic ion transport and metabolism];


Pssm-ID: 441518 [Multi-domain]  Cd Length: 405  Bit Score: 241.58  E-value: 3.93e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725   2 RLLALMGPAFIVGAWQFGPGNLTSAVQAGSRFGYSLIWVIAVSTVLMLVYADMSIRIALVSRGSVVETIKEQLGRWSGRI 81
Cdd:COG1914    9 RLLALLGPGLLVAAAYIDPGNLATYTQAGAQFGYSLLWVILLSNLLAIVLQEMSARLGIVTGKGLAELIRERLGRWLGWL 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725  82 AGFGVFAITLMFSVGNAVGSGLGLSLVFGGSPTWWTPTCTAVVVAILFARRlYTVIEKLVLVLVAIMAVSFVATAIVTRP 161
Cdd:COG1914   89 LLILLELANLATDAAEIAGAALALNLLFGIPLLLGAVITALLAILLLLRGG-YRRLERVLKVLVALMLLAFVVTAFLAHP 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725 162 DWGAAATGSVV-PVVPAGVGLLIVALVGTNFSINAAFYAGYASRERGLRREQYRQTTLVDTIPGIVAPGIMTALVITAAA 240
Cdd:COG1914  168 DWGEVAKGTLVpSLPGSGSLLLAIAILGATVMPYNLFLHSSLVQEKGWTGKEDLRYARLDTVVGMLLAGLVNLAILLLAA 247
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725 241 AVLPGAgGEEGASLKQFSAVLTPIAGEAGQTVFSLGFTGAAISAMIANATAGGTLLSDGLGYGNRLSSWKVRGGILGVLG 320
Cdd:COG1914  248 AVLHGT-GIGVDSAAQAAQALEPLLGEWAAILFALGLLAAGFSSTITATLAGAYVMAGFLGWRIGLWLRRFYLVTRLLTL 326
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 133911725 321 FGALVtVLAHGASPIQLIIAAQALTVVVVPILALLMLILANRSALMGDLRNTWWQNVLSAIGLIAIAAVCYQLIVTAFF 399
Cdd:COG1914  327 IGALI-VLLLGGDPVKLLVLSQVLNGLLLPFALIPLLLLTNDKDLMGEYRNGRWLNVLGWLIVLLIVVLNLYLLVSTLF 404
Nramp pfam01566
Natural resistance-associated macrophage protein; The natural resistance-associated macrophage ...
23-373 1.13e-63

Natural resistance-associated macrophage protein; The natural resistance-associated macrophage protein (NRAMP) family consists of Nramp1, Nramp2, and yeast proteins Smf1 and Smf2. The NRAMP family is a novel family of functional related proteins defined by a conserved hydrophobic core of ten transmembrane domains. This family of membrane proteins are divalent cation transporters. Nramp1 is an integral membrane protein expressed exclusively in cells of the immune system and is recruited to the membrane of a phagosome upon phagocytosis. By controlling divalent cation concentrations Nramp1 may regulate the interphagosomal replication of bacteria. Mutations in Nramp1 may genetically predispose an individual to susceptibility to diseases including leprosy and tuberculosis conversely this might however provide protection form rheumatoid arthritis. Nramp2 is a multiple divalent cation transporter for Fe2+, Mn2+ and Zn2+ amongst others it is expressed at high levels in the intestine; and is major transferrin-independent iron uptake system in mammals. The yeast proteins Smf1 and Smf2 may also transport divalent cations.


Pssm-ID: 426327 [Multi-domain]  Cd Length: 356  Bit Score: 207.80  E-value: 1.13e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725   23 LTSAVQAGSRFGYSLIWVIAVSTVLMLVYADMSIRIALVSRGSVVETIKEQLGRWSGRIAGFGVFAITLMFSVGNAVGSG 102
Cdd:pfam01566   1 WATDIQAGARFGYSLLWVLLLSNLMAILLQELSARLGLVTGKGLAELIRERFPRKVSWLLWILAELAIIATDLAEVIGGA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725  103 LGLSLVFGGSPTWWTPTCTAVVVAILFARRLYTVIEKLVLVLVAIMAVSFVATAIVTRPDWGAAATGSVV-PVVPAGVGL 181
Cdd:pfam01566  81 IALNLLFGIPLWIGVLITAVLVLLLLFQKGGYRKLEKVIIGLVLVIALSFIAELFLVKPDWGAVAAGLVVpSFPGSGSLL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725  182 LIVALVGTNFSINAAFYAGYASRERGL------RREQYRQTTLvDTIPGIVAPGIMTALVITAAAAVLPGAGGEEGASLK 255
Cdd:pfam01566 161 LAVGILGATVMPHNLFLHSSLVQERGWtidrdeEDEALRYSRI-DTIIALIVAGLVNAAILIVAAAAFHGSGGIDVATLA 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725  256 QFSAVLTPIAGEAGQTVFSLGFTGAAISAMIANATAGGTLLSDGLGYgnRLSSWKVRGGILGVLGFGALVTVLAHGA-SP 334
Cdd:pfam01566 240 DAAAALEPLLGKAAAVLFALGLLAAGLSSTITGTLAGQYVMEGFLGW--RIPLWLRRLITRAIAFYPALAVILLGGApGV 317
                         330       340       350
                  ....*....|....*....|....*....|....*....
gi 133911725  335 IQLIIAAQALTVVVVPILALLMLILANRSALMGDLRNTW 373
Cdd:pfam01566 318 VQLLVLSQVVLSLQLPFALIPLLLLTSDRKLMGEFVNSR 356
PRK00701 PRK00701
divalent metal cation transporter MntH;
2-399 1.03e-21

divalent metal cation transporter MntH;


Pssm-ID: 234815  Cd Length: 439  Bit Score: 96.06  E-value: 1.03e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725   2 RLLALMGPAFIVGAWQFGPGNLTSAVQAGSRFGYSLIWVIAVSTVLMLVYADMSIRIALVSRGSVVETIKEQLGRWSGR- 80
Cdd:PRK00701  32 RLLAFLGPAFLVAVGYMDPGNWATNIQGGSQFGYTLLWVILLSNLMAMLLQSLSAKLGIATGRDLAQACRDRYPRPVVWf 111
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725  81 ---IAGFGVFAITLmfsvGNAVGSGLGLSLVFGGSPTWWTPTCTAVVVAILF-ARRLYTVIEKLVLVLVAIMAVSFVATA 156
Cdd:PRK00701 112 lwiQAELAIMATDL----AEVIGAAIALKLLFGIPLLQGALITALDTFLILMlQRRGFRPLEAIIGGLLLVIAAAFIVEL 187
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725 157 IVTRPDWGAAATG---SVVPVVPAGVGLLIVALVG-TNFSINAAFYAG-----YASRERGLRREQYRQTTLVDTIPGIVA 227
Cdd:PRK00701 188 FLAQPDWAAVLKGfipSSEILPNPEALYLAAGILGaTVMPHNLYLHSSlvqtrVVGRTGEEKREALRFTRIDSAIALTIA 267
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725 228 PGIMTALVITAAAAvLPGAGGEEGASLKQFSAVLTPIAGEAGQTVFSLGFTGAAISAMIANATAGGTLLSDGLGYgnRLS 307
Cdd:PRK00701 268 GFVNAAMLILAAAA-FHASGHTDVADIEDAYLLLSPLLGAAAATLFGIALLASGLSSTVVGTLAGQIVMEGFLRL--RIP 344
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725 308 SWkVRGGILGVLGFG--ALVTVLAHGASPIQLIIAAQALTVVVVPILALLMLILANRSALMGDLRNTWWQNVLSAIGLIA 385
Cdd:PRK00701 345 LW-VRRLITRGLAMVpaLIVILLGGELDPTRLLVLSQVVLSFGLPFALIPLLLFTSDRKLMGELVNPRWVKIIAWIIAVL 423
                        410
                 ....*....|....
gi 133911725 386 IAAVCYQLIVTAFF 399
Cdd:PRK00701 424 IVALNIYLLYQTFT 437
nramp TIGR01197
NRAMP (natural resistance-associated macrophage protein) metal ion transporters; This model ...
2-165 1.47e-13

NRAMP (natural resistance-associated macrophage protein) metal ion transporters; This model describes the Nramp metal ion transporter family. Historically, in mammals these proteins have been functionally characterized as proteins involved in the host pathogen resistance, hence the name - NRAMP. At least two isoforms Nramp1 and Nramp2 have been identified. However the exact mechanism of pathogen resistance was unclear, until it was demonstrated by expression cloning and electrophysiological techniques that this protein was a metal ion transporter. It was also independently demonstrated that a microcytic anemia (mk) locus in mouse, encodes a metal ion transporter (DCT1 or Nramp2). The transporter has a broad range of substrate specificity that include Fe+2, Zn+2, Mn+2, Co+2, Cd+2, Cu+2, Ni+2 and Pb+2. The uptake of these metal ions is coupled to proton symport. Metal ions are essential cofactors in a number of biological process including, oxidative phosphorylation, gene regulation and metal ion homeostasis. Nramp1 could confer resistance to infection in one of the two ways. (1) The uptake of Fe+2 can produce toxic hydroxyl radicals via Fenton reaction killing the pathogens in phagosomes or (2) Deplete the metal ion pools in the phagosome and deprive the pathogens of metal ions, which is critical for its survival. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 162246  Cd Length: 390  Bit Score: 71.68  E-value: 1.47e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725    2 RLLALMGPAFIVGAWQFGPGNLTSAVQAGSRFGYSLIWVIAVSTVLMLVYADMSIRIALVSRGSVVETIKEQLGRWSGRI 81
Cdd:TIGR01197   2 KLWAFIGPGFLMSIAYIDPGNYSTDLQAGAAAGYKLLWVLLLSNIMALLLQRLCARLGVVTGLDLAEVCREHYPKVPRIT 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725   82 AGFGVFAITLMFSVGNAVGSGLGLSLVFgGSPTWWTPTCTAV-VVAILFA-RRLYTVIEKLVLVLVAIMAVSFVATAIVT 159
Cdd:TIGR01197  82 LWILAELAIIATDMAEVIGTAIALNLLS-HIPLWGGVLITIVdVFLFLFLdKPGLRILEAFVALLVTIVAICFAYELFYA 160

                  ....*.
gi 133911725  160 RPDWGA 165
Cdd:TIGR01197 161 KPGQVK 166
Nramp_1 NF037982
Nramp family divalent metal transporter; Nramp (natural resistance-associated macrophage ...
8-349 3.91e-13

Nramp family divalent metal transporter; Nramp (natural resistance-associated macrophage protein) family divalent metal transporters are widely conserved divalent metal transporters, which enables manganese import in bacteria and dietary iron uptake in mammals.


Pssm-ID: 468301  Cd Length: 404  Bit Score: 70.47  E-value: 3.91e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725   8 GPAFIVGAWQFGPGNLTSAVQAGSRFGYSLIWVIAVSTVLMLVYADMSIRIALVSRGSVVETIKEqLGRWSGRIagFGVF 87
Cdd:NF037982   1 GPGVIAAAAGVGSGEFILWPYIGSQFGYTLLWAALVGVLMQMFLNMEIERYTLATGETLFTGFRR-LWKPWGWF--FWVQ 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725  88 AITLMFSVGNAVGSGLGLSLVFGGSPT--WWTPTCTAVVVAIL-FARRLYTVIEKLVLVLVA--IMAVSFVATAIVTRPD 162
Cdd:NF037982  78 AELVNIWPGWATFSAAALTYLLGFGIPilWIAIATLVLIGLILtLAPVVYRALEKVIGVKVGllVVFVAVAVVAVIAAPD 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725 163 WGAAATGSVVPVVPAGVGLLIV----ALVGTNFSIN------------------------------AAFYAGYASRERGL 208
Cdd:NF037982 158 WGALGAGVLFPQLPDGDLFAVLlgaiAFAGAGGAQNmvqsnwlrdkgfgmgshvprltsrvtgeteAEPSTGYMFPTDEE 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133911725 209 RREQYRQTTLVDTIPGIVAPGIMTALVITA----AAAVLPGAG--GEEGASLKQFSAVLTPIAGEAGQTVFSLGFTGAAI 282
Cdd:NF037982 238 NLARWRGWWRVANFDQLIAFWLIGFINISMlsvlAAATFFGSGslANDVAFLDVEGQTLAALVGPWFGTLFWLGGAASGL 317
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 133911725 283 SAMIANATAGGTLLSDG-----LGYGNRLSSWKVRGGIL-GVLGFGALVtVLAHGASPIQLIIAAQALTVVVV 349
Cdd:NF037982 318 SSALGIVDYVSRLAADVvkqgfLGGASRWSESRIYLYLVwGLTMFGIVI-LLAGGDQPLVLLVISAVLLGFGM 389
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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