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Conserved domains on  [gi|545742613|emb|CCB96399|]
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hypothetical protein BV6-11 [Bracoviriform congregatae]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PHA02744 super family cl42848
hypothetical protein; Provisional
 5-77 1.05e-11

hypothetical protein; Provisional


The actual alignment was detected with superfamily member PHA02744:

Pssm-ID: 456193  Cd Length: 88  Bit Score: 55.41  E-value: 1.05e-11
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 545742613  5 YLCYVPKEWKSLPEDILKSTIKDKALKQWKHTKYLEGTTIRLENVTAKLNYYRLTPWMRKADDSNEYPSTSQY 77
Cdd:PHA02744  9 YICIAPKEWEEYKRKDLEKLILDSCKDHRKKTTCIHGANTNIAGVSTKLEYNDLKLWLKKQDDISARPDQGDY 81
 
Name Accession Description Interval E-value
PHA02744 PHA02744
hypothetical protein; Provisional
 5-77 1.05e-11

hypothetical protein; Provisional


Pssm-ID: 165111  Cd Length: 88  Bit Score: 55.41  E-value: 1.05e-11
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 545742613  5 YLCYVPKEWKSLPEDILKSTIKDKALKQWKHTKYLEGTTIRLENVTAKLNYYRLTPWMRKADDSNEYPSTSQY 77
Cdd:PHA02744  9 YICIAPKEWEEYKRKDLEKLILDSCKDHRKKTTCIHGANTNIAGVSTKLEYNDLKLWLKKQDDISARPDQGDY 81
 
Name Accession Description Interval E-value
PHA02744 PHA02744
hypothetical protein; Provisional
 5-77 1.05e-11

hypothetical protein; Provisional


Pssm-ID: 165111  Cd Length: 88  Bit Score: 55.41  E-value: 1.05e-11
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 545742613  5 YLCYVPKEWKSLPEDILKSTIKDKALKQWKHTKYLEGTTIRLENVTAKLNYYRLTPWMRKADDSNEYPSTSQY 77
Cdd:PHA02744  9 YICIAPKEWEEYKRKDLEKLILDSCKDHRKKTTCIHGANTNIAGVSTKLEYNDLKLWLKKQDDISARPDQGDY 81
PHA02739 PHA02739
hypothetical protein; Provisional
 9-83 6.00e-04

hypothetical protein; Provisional


Pssm-ID: 222924  Cd Length: 116  Bit Score: 35.98  E-value: 6.00e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 545742613   9 VPKEWKSLPEDILKSTIKDKALKQWKHTKYLEGTTIRLENVTAKLNYYRLTPWMRKADDSNEYPSTSQYCGIEMK 83
Cdd:PHA02739   7 VPNEWKVLPPATLQTELLRIISAKQSTDQTATGVKGAYNGVTAESIEFSGYLWFRKLDDTNKKPDFKCYSLMVIP 81
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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