TPA: U4/U6-U5 snRNP complex subunit SNU23 [Saccharomyces cerevisiae S288C]
Protein Classification
C2H2-type zinc finger protein( domain architecture ID 10583667)
Cys2His2 (C2H2)-type zinc finger protein may be involved in transcriptional regulation
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| zf-met | pfam12874 | Zinc-finger of C2H2 type; This is a zinc-finger domain with the CxxCx(12)Hx(6)H motif, found ... |
80-104 | 4.49e-05 | ||
Zinc-finger of C2H2 type; This is a zinc-finger domain with the CxxCx(12)Hx(6)H motif, found in multiple copies in a wide range of proteins from plants to metazoans. Some member proteins, particularly those from plants, are annotated as being RNA-binding. : Pssm-ID: 463736 [Multi-domain] Cd Length: 25 Bit Score: 39.02 E-value: 4.49e-05
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| Name | Accession | Description | Interval | E-value | ||
| zf-met | pfam12874 | Zinc-finger of C2H2 type; This is a zinc-finger domain with the CxxCx(12)Hx(6)H motif, found ... |
80-104 | 4.49e-05 | ||
Zinc-finger of C2H2 type; This is a zinc-finger domain with the CxxCx(12)Hx(6)H motif, found in multiple copies in a wide range of proteins from plants to metazoans. Some member proteins, particularly those from plants, are annotated as being RNA-binding. Pssm-ID: 463736 [Multi-domain] Cd Length: 25 Bit Score: 39.02 E-value: 4.49e-05
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| ZnF_U1 | smart00451 | U1-like zinc finger; Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ... |
79-104 | 4.78e-04 | ||
U1-like zinc finger; Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins. Pssm-ID: 197732 [Multi-domain] Cd Length: 35 Bit Score: 36.46 E-value: 4.78e-04
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| Name | Accession | Description | Interval | E-value | ||
| zf-met | pfam12874 | Zinc-finger of C2H2 type; This is a zinc-finger domain with the CxxCx(12)Hx(6)H motif, found ... |
80-104 | 4.49e-05 | ||
Zinc-finger of C2H2 type; This is a zinc-finger domain with the CxxCx(12)Hx(6)H motif, found in multiple copies in a wide range of proteins from plants to metazoans. Some member proteins, particularly those from plants, are annotated as being RNA-binding. Pssm-ID: 463736 [Multi-domain] Cd Length: 25 Bit Score: 39.02 E-value: 4.49e-05
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| ZnF_U1 | smart00451 | U1-like zinc finger; Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ... |
79-104 | 4.78e-04 | ||
U1-like zinc finger; Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins. Pssm-ID: 197732 [Multi-domain] Cd Length: 35 Bit Score: 36.46 E-value: 4.78e-04
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| zf-C2H2_jaz | pfam12171 | Zinc-finger double-stranded RNA-binding; This domain family is found in archaea and eukaryotes, ... |
80-104 | 3.62e-03 | ||
Zinc-finger double-stranded RNA-binding; This domain family is found in archaea and eukaryotes, and is approximately 30 amino acids in length. The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localize in the nucleus, particularly the nucleolus. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localization. Pssm-ID: 432381 [Multi-domain] Cd Length: 27 Bit Score: 33.68 E-value: 3.62e-03
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