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Conserved domains on  [gi|353349254|gb|EHB93519|]
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hypothetical protein HMPREF9450_00012 [Alistipes indistinctus YIT 12060]

Protein Classification

EpsG family protein( domain architecture ID 10632861)

EpsG family protein similar to Bacillus subtilis transmembrane protein EpsG, which is involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
EpsG pfam14897
EpsG family; This family of proteins are related to the EpsG protein from B. subtilis. These ...
 33-332 1.94e-23

EpsG family; This family of proteins are related to the EpsG protein from B. subtilis. These proteins are likely glycosyl transferases belonging to the membrane protein GT-C clan.


:

Pssm-ID: 434295  Cd Length: 325  Bit Score: 98.94  E-value: 1.94e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 353349254   33 LLIVFSGLRYGVGIDFPAYWDLYRGNEYS------QSEAGFRLLCGILTRLGFGPQTMFLATSAIVVVFVYKAAVYYDKT 106
Cdd:pfam14897  10 FLFLLAGFRYGVGTDWFSYVEIYELILYLsylflfGFEPGYVLLNSLVKSFGNNYQFFLFILALITLILLFYFIRKYSKN 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 353349254  107 HVCFAFFVFLFAGTFLESLNLVRQYVAIALFFWGSRYIVGRSPTKYMLVVLAASLFHISALVLLPFYWLLRIRFPGWLLF 186
Cdd:pfam14897  90 PFLLALLLFLLLLYFLLSMNQIRQGIAISIILLALAYLIKKKWKKFLLLVILASLFHSSAIIFLPLYFILNKKLKKKVIL 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 353349254  187 GILGFSLVLSFIFPLKGLISMIPRYGQYLTLYSEANQTTALGLGYFSKLLIAFAVILF-RKKLLGVEAVKYTVVMNGFIF 265
Cdd:pfam14897 170 LIFSFILLLFLFFDNILSLLSPLLISERYASYLESDYYGGGTGIIVGLLFLLFILFLLlLKYIREEKKKSDKFFLNILLF 249

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 353349254  266 YVALMTLFNDFMVFL-RISYYFHIFIILLLP-RLAMPFTYRSRPIVLGIASAYCLLLCFLSLKASDAYM 332
Cdd:pfam14897 250 GLILFLLLLFLSVIFdRLALYFSIFIIIFLPpILKKIFKRKKRKLIVLILIIFLLLFYFISLLNSADYD 318
 
Name Accession Description Interval E-value
EpsG pfam14897
EpsG family; This family of proteins are related to the EpsG protein from B. subtilis. These ...
 33-332 1.94e-23

EpsG family; This family of proteins are related to the EpsG protein from B. subtilis. These proteins are likely glycosyl transferases belonging to the membrane protein GT-C clan.


Pssm-ID: 434295  Cd Length: 325  Bit Score: 98.94  E-value: 1.94e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 353349254   33 LLIVFSGLRYGVGIDFPAYWDLYRGNEYS------QSEAGFRLLCGILTRLGFGPQTMFLATSAIVVVFVYKAAVYYDKT 106
Cdd:pfam14897  10 FLFLLAGFRYGVGTDWFSYVEIYELILYLsylflfGFEPGYVLLNSLVKSFGNNYQFFLFILALITLILLFYFIRKYSKN 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 353349254  107 HVCFAFFVFLFAGTFLESLNLVRQYVAIALFFWGSRYIVGRSPTKYMLVVLAASLFHISALVLLPFYWLLRIRFPGWLLF 186
Cdd:pfam14897  90 PFLLALLLFLLLLYFLLSMNQIRQGIAISIILLALAYLIKKKWKKFLLLVILASLFHSSAIIFLPLYFILNKKLKKKVIL 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 353349254  187 GILGFSLVLSFIFPLKGLISMIPRYGQYLTLYSEANQTTALGLGYFSKLLIAFAVILF-RKKLLGVEAVKYTVVMNGFIF 265
Cdd:pfam14897 170 LIFSFILLLFLFFDNILSLLSPLLISERYASYLESDYYGGGTGIIVGLLFLLFILFLLlLKYIREEKKKSDKFFLNILLF 249

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 353349254  266 YVALMTLFNDFMVFL-RISYYFHIFIILLLP-RLAMPFTYRSRPIVLGIASAYCLLLCFLSLKASDAYM 332
Cdd:pfam14897 250 GLILFLLLLFLSVIFdRLALYFSIFIIIFLPpILKKIFKRKKRKLIVLILIIFLLLFYFISLLNSADYD 318
 
Name Accession Description Interval E-value
EpsG pfam14897
EpsG family; This family of proteins are related to the EpsG protein from B. subtilis. These ...
 33-332 1.94e-23

EpsG family; This family of proteins are related to the EpsG protein from B. subtilis. These proteins are likely glycosyl transferases belonging to the membrane protein GT-C clan.


Pssm-ID: 434295  Cd Length: 325  Bit Score: 98.94  E-value: 1.94e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 353349254   33 LLIVFSGLRYGVGIDFPAYWDLYRGNEYS------QSEAGFRLLCGILTRLGFGPQTMFLATSAIVVVFVYKAAVYYDKT 106
Cdd:pfam14897  10 FLFLLAGFRYGVGTDWFSYVEIYELILYLsylflfGFEPGYVLLNSLVKSFGNNYQFFLFILALITLILLFYFIRKYSKN 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 353349254  107 HVCFAFFVFLFAGTFLESLNLVRQYVAIALFFWGSRYIVGRSPTKYMLVVLAASLFHISALVLLPFYWLLRIRFPGWLLF 186
Cdd:pfam14897  90 PFLLALLLFLLLLYFLLSMNQIRQGIAISIILLALAYLIKKKWKKFLLLVILASLFHSSAIIFLPLYFILNKKLKKKVIL 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 353349254  187 GILGFSLVLSFIFPLKGLISMIPRYGQYLTLYSEANQTTALGLGYFSKLLIAFAVILF-RKKLLGVEAVKYTVVMNGFIF 265
Cdd:pfam14897 170 LIFSFILLLFLFFDNILSLLSPLLISERYASYLESDYYGGGTGIIVGLLFLLFILFLLlLKYIREEKKKSDKFFLNILLF 249

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 353349254  266 YVALMTLFNDFMVFL-RISYYFHIFIILLLP-RLAMPFTYRSRPIVLGIASAYCLLLCFLSLKASDAYM 332
Cdd:pfam14897 250 GLILFLLLLFLSVIFdRLALYFSIFIIIFLPpILKKIFKRKKRKLIVLILIIFLLLFYFISLLNSADYD 318
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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