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Conserved domains on  [gi|435048946|gb|ELM38493|]
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hypothetical protein SEEE1747_00125 [Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_1747]

Protein Classification

toxin_TenpN domain-containing protein( domain architecture ID 13024805)

toxin_TenpN domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
toxin_TenpN cd17493
type III toxin-antitoxin system toxin TenpN and similar proteins; TenpN-like toxin component ...
 7-138 1.88e-37

type III toxin-antitoxin system toxin TenpN and similar proteins; TenpN-like toxin component of a type III toxin-antitoxin (TA) system, which consists of a ribonuclease (RNase) toxin that processes its structured and specific cognate RNA antitoxin, which in turn then directly inhibits the toxin. TA systems have been associated with many important phenotypes, like phage resistance, maintenance of genomic islands, and formation of bacterial persister cells.


:

Pssm-ID: 341213  Cd Length: 121  Bit Score: 124.99  E-value: 1.88e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435048946   7 MELKKLDSSFYQNNPvvlealdfdAKTNSWIGGDKVRGHGIVQIQLHDLTFAIPVRSHIRHNDCYIIERDKgRNDIRGMG 86
Cdd:cd17493    1 MKIVKLTEKFYEDYP---------HLKEPEILKKKNRPYGVLLIEINGLTFAIPLRSNINHKYGYKFKNTP-RSKKKKSG 70

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 435048946  87 LDYSKAMLITDPTYVSADIFLLRNKKAAKdLLSKEAHVTKQFSQYVERYVEA 138
Cdd:cd17493   71 LDYSKAVIIKDDEYISDENALIDQDEYKK-IKKNEKKIVKEFEKYVKKYIKA 121
 
Name Accession Description Interval E-value
toxin_TenpN cd17493
type III toxin-antitoxin system toxin TenpN and similar proteins; TenpN-like toxin component ...
 7-138 1.88e-37

type III toxin-antitoxin system toxin TenpN and similar proteins; TenpN-like toxin component of a type III toxin-antitoxin (TA) system, which consists of a ribonuclease (RNase) toxin that processes its structured and specific cognate RNA antitoxin, which in turn then directly inhibits the toxin. TA systems have been associated with many important phenotypes, like phage resistance, maintenance of genomic islands, and formation of bacterial persister cells.


Pssm-ID: 341213  Cd Length: 121  Bit Score: 124.99  E-value: 1.88e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435048946   7 MELKKLDSSFYQNNPvvlealdfdAKTNSWIGGDKVRGHGIVQIQLHDLTFAIPVRSHIRHNDCYIIERDKgRNDIRGMG 86
Cdd:cd17493    1 MKIVKLTEKFYEDYP---------HLKEPEILKKKNRPYGVLLIEINGLTFAIPLRSNINHKYGYKFKNTP-RSKKKKSG 70

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 435048946  87 LDYSKAMLITDPTYVSADIFLLRNKKAAKdLLSKEAHVTKQFSQYVERYVEA 138
Cdd:cd17493   71 LDYSKAVIIKDDEYISDENALIDQDEYKK-IKKNEKKIVKEFEKYVKKYIKA 121
 
Name Accession Description Interval E-value
toxin_TenpN cd17493
type III toxin-antitoxin system toxin TenpN and similar proteins; TenpN-like toxin component ...
 7-138 1.88e-37

type III toxin-antitoxin system toxin TenpN and similar proteins; TenpN-like toxin component of a type III toxin-antitoxin (TA) system, which consists of a ribonuclease (RNase) toxin that processes its structured and specific cognate RNA antitoxin, which in turn then directly inhibits the toxin. TA systems have been associated with many important phenotypes, like phage resistance, maintenance of genomic islands, and formation of bacterial persister cells.


Pssm-ID: 341213  Cd Length: 121  Bit Score: 124.99  E-value: 1.88e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 435048946   7 MELKKLDSSFYQNNPvvlealdfdAKTNSWIGGDKVRGHGIVQIQLHDLTFAIPVRSHIRHNDCYIIERDKgRNDIRGMG 86
Cdd:cd17493    1 MKIVKLTEKFYEDYP---------HLKEPEILKKKNRPYGVLLIEINGLTFAIPLRSNINHKYGYKFKNTP-RSKKKKSG 70

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 435048946  87 LDYSKAMLITDPTYVSADIFLLRNKKAAKdLLSKEAHVTKQFSQYVERYVEA 138
Cdd:cd17493   71 LDYSKAVIIKDDEYISDENALIDQDEYKK-IKKNEKKIVKEFEKYVKKYIKA 121
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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