NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|512057731|gb|EPD57218|]
View 

phosphate ABC transporter, permease PstA [Streptomyces sp. HGB0020]

Protein Classification

PstA family ABC transporter permease( domain architecture ID 11426443)

PstA family ABC transporter permease is the transmembrane subunit (TM) found in periplasmic binding protein (PBP)-dependent ATP-binding cassette (ABC) transporters; similar to phosphate transport system permease protein PstA

Gene Ontology:  GO:0140359|GO:0042626|GO:0043190|GO:0016020
PubMed:  25750732|24638992|18535149|17723295
TCDB:  3.A.1

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
PstA COG0581
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 91-353 3.18e-104

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


:

Pssm-ID: 440346 [Multi-domain]  Cd Length: 259  Bit Score: 306.58  E-value: 3.18e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731  91 IAVVPLVSLIWTTVARGVKVLDVYFLTHSMgivADSQPGGGIYHAIIGSLEQVGLATIIAAPIGVLTAIYLVEYGRGG-L 169
Cdd:COG0581    1 LALLPLVWILGTVLVKGLPALSWEFLTSSP---SPGPEGGGILPAIVGTLLLVLLATLIAVPLGVLAAIYLAEYARGGrL 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 170 ARSVTFFVDVMTGIPSIVAGLFILSLM-LIFDMEPFGFAGSLALAILMMPIVVRSTEEMLKLVSNELREASLALGVPKWR 248
Cdd:COG0581   78 ARLIRFAIDVLAGVPSIVYGLFGYALFvLTLGLGFSLLAGALALALLMLPVVIRTTEEALRLVPNSLREASYALGATKWQ 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 249 TILKVVLPTSIGGITTGIMLAVARIAGETAPVLLLVFGNRFINNNPFDGAqQSLPLYIYQQYanSAGANAAYDRAWAASL 328
Cdd:COG0581  158 TIRKVVLPAALPGILTGVILAIARAAGETAPLLFTAGVSPFLPLSLFDPF-ATLPVHIYNLA--SSPYPAAQELAWAAAL 234

                        250       260
                 ....*....|....*....|....*
gi 512057731 329 TLIAFVMILNLVARAIARWKAPKTG 353
Cdd:COG0581  235 VLLLLVLLLNLLARLLRRRFRKKLK 259
 
Name Accession Description Interval E-value
PstA COG0581
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 91-353 3.18e-104

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440346 [Multi-domain]  Cd Length: 259  Bit Score: 306.58  E-value: 3.18e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731  91 IAVVPLVSLIWTTVARGVKVLDVYFLTHSMgivADSQPGGGIYHAIIGSLEQVGLATIIAAPIGVLTAIYLVEYGRGG-L 169
Cdd:COG0581    1 LALLPLVWILGTVLVKGLPALSWEFLTSSP---SPGPEGGGILPAIVGTLLLVLLATLIAVPLGVLAAIYLAEYARGGrL 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 170 ARSVTFFVDVMTGIPSIVAGLFILSLM-LIFDMEPFGFAGSLALAILMMPIVVRSTEEMLKLVSNELREASLALGVPKWR 248
Cdd:COG0581   78 ARLIRFAIDVLAGVPSIVYGLFGYALFvLTLGLGFSLLAGALALALLMLPVVIRTTEEALRLVPNSLREASYALGATKWQ 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 249 TILKVVLPTSIGGITTGIMLAVARIAGETAPVLLLVFGNRFINNNPFDGAqQSLPLYIYQQYanSAGANAAYDRAWAASL 328
Cdd:COG0581  158 TIRKVVLPAALPGILTGVILAIARAAGETAPLLFTAGVSPFLPLSLFDPF-ATLPVHIYNLA--SSPYPAAQELAWAAAL 234

                        250       260
                 ....*....|....*....|....*
gi 512057731 329 TLIAFVMILNLVARAIARWKAPKTG 353
Cdd:COG0581  235 VLLLLVLLLNLLARLLRRRFRKKLK 259
3a0107s02c TIGR00974
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ...
 78-346 1.31e-79

phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273373  Cd Length: 271  Bit Score: 244.45  E-value: 1.31e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731   78 DRIATGLVWTAFLIAVVPLVSLIWTTVARGVKVLDVYFLTHSMgivADSQPGGGIYHAIIGSLEQVGLATIIAAPIGVLT 157
Cdd:TIGR00974   1 DKIFTFISLLSALLALLPLIWILWYILIKGLPALNLEFFTKSP---TPTGAEGGIGPAIVGTLLLTLLAIVIAVPLGIGA 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731  158 AIYLVEYGRGG-LARSVTFFVDVMTGIPSIVAGLFILSLMLI--FDMEPFGFAGSLALAILMMPIVVRSTEEMLKLVSNE 234
Cdd:TIGR00974  78 AIYLAEYANGSrFTKIIRFAVDILAGVPSIVVGLFGYGFFVLtyLGGGFSLLAGALALALLILPVIIRTTEEALKAVPKD 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731  235 LREASLALGVPKWRTILKVVLPTSIGGITTGIMLAVARIAGETAPVLLLVFGNRFINNNPFDGAqQSLPLYIYQQYANSA 314
Cdd:TIGR00974 158 LREASLALGATKWQTIFKVVLPAALPGILTGIILSIARAAGETAPLLFTAGGSAFTPPNLFDPF-ATLPVLIYNLASEGP 236

                         250       260       270
                  ....*....|....*....|....*....|..
gi 512057731  315 gANAAYDRAWAASLTLIAFVMILNLVARAIAR 346
Cdd:TIGR00974 237 -YVEAQQLAWAAALVLIVLVLLLNLIARLLRR 267
pstA PRK11268
phosphate ABC transporter permease PstA;
71-348 4.09e-63

phosphate ABC transporter permease PstA;


Pssm-ID: 183065 [Multi-domain]  Cd Length: 295  Bit Score: 202.99  E-value: 4.09e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731  71 EGRRQAKDRIATGLVWTAFLIAVVPLVSLIWTTVARGVKVLDVYFLTHSMGivADSQPGGGIYHAIIGSLEQVGLATIIA 150
Cdd:PRK11268  20 QARRRLKNRIALTLSMATMAFGLFWLIWILMSTITLGIDGMSLALFTEMTP--PPNTAGGGLANAIAGSGLLILWATVVG 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 151 APIGVLTAIYLVEYGRGGLARSVTFFV-DVMTGIPSIVAGLFILSLmLIFDMEPF-GFAGSLALAILMMPIVVRSTEEML 228
Cdd:PRK11268  98 TPLGIMAGIYLAEYGRKSWLAEVIRFInDILLSAPSIVVGLFVYTI-VVAQMEHFsGWAGVIALALLQIPIVIRTTENML 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 229 KLVSNELREASLALGVPKWRTILKVVLPTSIGGITTGIMLAVARIAGETAPVLLLVFGNRFINNNpFDGAQQSLPLYIYq 308
Cdd:PRK11268 177 KLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGVLLAIARIAGETAPLLFTALSNQFWSTD-MMQPIANLPVTIF- 254

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 512057731 309 QYANSAGANAAyDRAWAASLTLIAFVMILNLVARAIARWK 348
Cdd:PRK11268 255 KFAMSPFAEWQ-QLAWAGVLLITLCVLLLNILARVVFAKK 293
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 136-290 2.22e-15

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 73.47  E-value: 2.22e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 136 IIGSLEQVGLATIIAAPIGVLTAIYLVEYgRGGLARSVTFFVDVMTGIPSIVAGLFILSLMLIFDMEP----FGFAGSLA 211
Cdd:cd06261    1 LLNTLLLALIATLLALVLGLLLGIILARK-RGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGilpgLGLPALIL 79

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 512057731 212 LAILMMPIVVRSTEEMLKLVSNELREASLALGVPKWRTILKVVLPTSIGGITTGIMLAVARIAGETAPVLLLVFGNRFI 290
Cdd:cd06261   80 ALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPG 158
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 154-354 1.33e-10

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 59.62  E-value: 1.33e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731  154 GVLTAIYLVEYGRGGLARSVTFFVDVMTGIPSIVAgLFILSLMLIFDMEPFGFAGSLALAILMMPIVVRST-EEMLKLVS 232
Cdd:pfam00528   1 GIPLGIIAALRRGRRLDRLLRPLIDLLQALPSFVL-AILLVVIAILSILGHGILPAIILALLGWAGYARLIrRAALRSLP 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731  233 NELREASLALGVPKWRTILKVVLPTSIGGITTGIMLAVARIAGETAPVLllvfgnrFINNNPFDGAQQSLPLYIYQqyan 312
Cdd:pfam00528  80 SDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLE-------FLGSWPGLGLLLIEAILGYD---- 148

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 512057731  313 saganaaYDRAWAASLTLIAFVMILNLVARAIARWKAPKTGR 354
Cdd:pfam00528 149 -------YPEIQGPVLAAALILLLLNLLVDILQRLLDPRVRK 183
ABC_perm1 NF038017
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ...
 139-287 9.18e-04

ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.


Pssm-ID: 411610 [Multi-domain]  Cd Length: 184  Bit Score: 39.84  E-value: 9.18e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 139 SLEQVGLATIIAAPIGVLTAIYLVEYGRGGlARSVTFFVDVMTGIPSIVAGLFIlsLMLIFDMEPFGFAGSL-------- 210
Cdd:NF038017   1 SLRVSGTATLIAALIGIPLGALLALRRFPG-RRLVISLLNTLMGLPPVVVGLIV--YLLLSRSGPLGFLGLLytptamii 77

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 512057731 211 ALAILMMPIVVRSTEEMLKLVSNELREASLALGVPKWRTILkVVLPTSIGGITTGIMLAVARIAGETAPVlLLVFGN 287
Cdd:NF038017  78 AQAVLALPIVAGLTLAAVQGLDPELRLQILSLGATRWQALW-TLLKEARFALLAAVLAGFGRAISEVGAV-MMVGGN 152
 
Name Accession Description Interval E-value
PstA COG0581
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 91-353 3.18e-104

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440346 [Multi-domain]  Cd Length: 259  Bit Score: 306.58  E-value: 3.18e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731  91 IAVVPLVSLIWTTVARGVKVLDVYFLTHSMgivADSQPGGGIYHAIIGSLEQVGLATIIAAPIGVLTAIYLVEYGRGG-L 169
Cdd:COG0581    1 LALLPLVWILGTVLVKGLPALSWEFLTSSP---SPGPEGGGILPAIVGTLLLVLLATLIAVPLGVLAAIYLAEYARGGrL 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 170 ARSVTFFVDVMTGIPSIVAGLFILSLM-LIFDMEPFGFAGSLALAILMMPIVVRSTEEMLKLVSNELREASLALGVPKWR 248
Cdd:COG0581   78 ARLIRFAIDVLAGVPSIVYGLFGYALFvLTLGLGFSLLAGALALALLMLPVVIRTTEEALRLVPNSLREASYALGATKWQ 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 249 TILKVVLPTSIGGITTGIMLAVARIAGETAPVLLLVFGNRFINNNPFDGAqQSLPLYIYQQYanSAGANAAYDRAWAASL 328
Cdd:COG0581  158 TIRKVVLPAALPGILTGVILAIARAAGETAPLLFTAGVSPFLPLSLFDPF-ATLPVHIYNLA--SSPYPAAQELAWAAAL 234

                        250       260
                 ....*....|....*....|....*
gi 512057731 329 TLIAFVMILNLVARAIARWKAPKTG 353
Cdd:COG0581  235 VLLLLVLLLNLLARLLRRRFRKKLK 259
3a0107s02c TIGR00974
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ...
 78-346 1.31e-79

phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273373  Cd Length: 271  Bit Score: 244.45  E-value: 1.31e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731   78 DRIATGLVWTAFLIAVVPLVSLIWTTVARGVKVLDVYFLTHSMgivADSQPGGGIYHAIIGSLEQVGLATIIAAPIGVLT 157
Cdd:TIGR00974   1 DKIFTFISLLSALLALLPLIWILWYILIKGLPALNLEFFTKSP---TPTGAEGGIGPAIVGTLLLTLLAIVIAVPLGIGA 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731  158 AIYLVEYGRGG-LARSVTFFVDVMTGIPSIVAGLFILSLMLI--FDMEPFGFAGSLALAILMMPIVVRSTEEMLKLVSNE 234
Cdd:TIGR00974  78 AIYLAEYANGSrFTKIIRFAVDILAGVPSIVVGLFGYGFFVLtyLGGGFSLLAGALALALLILPVIIRTTEEALKAVPKD 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731  235 LREASLALGVPKWRTILKVVLPTSIGGITTGIMLAVARIAGETAPVLLLVFGNRFINNNPFDGAqQSLPLYIYQQYANSA 314
Cdd:TIGR00974 158 LREASLALGATKWQTIFKVVLPAALPGILTGIILSIARAAGETAPLLFTAGGSAFTPPNLFDPF-ATLPVLIYNLASEGP 236

                         250       260       270
                  ....*....|....*....|....*....|..
gi 512057731  315 gANAAYDRAWAASLTLIAFVMILNLVARAIAR 346
Cdd:TIGR00974 237 -YVEAQQLAWAAALVLIVLVLLLNLIARLLRR 267
pstA PRK11268
phosphate ABC transporter permease PstA;
71-348 4.09e-63

phosphate ABC transporter permease PstA;


Pssm-ID: 183065 [Multi-domain]  Cd Length: 295  Bit Score: 202.99  E-value: 4.09e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731  71 EGRRQAKDRIATGLVWTAFLIAVVPLVSLIWTTVARGVKVLDVYFLTHSMGivADSQPGGGIYHAIIGSLEQVGLATIIA 150
Cdd:PRK11268  20 QARRRLKNRIALTLSMATMAFGLFWLIWILMSTITLGIDGMSLALFTEMTP--PPNTAGGGLANAIAGSGLLILWATVVG 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 151 APIGVLTAIYLVEYGRGGLARSVTFFV-DVMTGIPSIVAGLFILSLmLIFDMEPF-GFAGSLALAILMMPIVVRSTEEML 228
Cdd:PRK11268  98 TPLGIMAGIYLAEYGRKSWLAEVIRFInDILLSAPSIVVGLFVYTI-VVAQMEHFsGWAGVIALALLQIPIVIRTTENML 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 229 KLVSNELREASLALGVPKWRTILKVVLPTSIGGITTGIMLAVARIAGETAPVLLLVFGNRFINNNpFDGAQQSLPLYIYq 308
Cdd:PRK11268 177 KLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGVLLAIARIAGETAPLLFTALSNQFWSTD-MMQPIANLPVTIF- 254

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 512057731 309 QYANSAGANAAyDRAWAASLTLIAFVMILNLVARAIARWK 348
Cdd:PRK11268 255 KFAMSPFAEWQ-QLAWAGVLLITLCVLLLNILARVVFAKK 293
PstC COG0573
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 72-353 1.88e-48

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440338 [Multi-domain]  Cd Length: 303  Bit Score: 165.26  E-value: 1.88e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731  72 GRRQAKDRIATGLVWTAFLIAVVPLVSLIWTTVARGVKVLDVY----FLTHSMGIVADSQPGGGIYHAIIGSLEQVGLAT 147
Cdd:COG0573   11 RRRRLGDRLFRGLLLLAALLSILILLLIVLFLLIESLPAFQEVglleFLTGTEWNPVSSNGEFGILPLIVGTLLVSLIAL 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 148 IIAAPIGVLTAIYLVEYGRGGLARSVTFFVDVMTGIPSIV---AGLFILS--LMLIFDMEPFGF---AGSLALAILMMPI 219
Cdd:COG0573   91 LIAVPLGLGIAIFLSEYAPPRLRRILKPAIELLAGIPSVVygfWGLFVLVplLRDLFPWPPSGFsllTAGIVLAIMILPT 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 220 VVRSTEEMLKLVSNELREASLALGVPKWRTILKVVLPTSIGGITTGIMLAVARIAGETAPVlLLVFGNRF-INNNPFDGA 298
Cdd:COG0573  171 ITSLSRDALRAVPRSLREAALALGATRWETIRKVVLPAARSGIIAAVILGLGRALGETMAV-LMVAGNAPqIPFSLFDPG 249

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 512057731 299 qQSLPLYIYQQYANSAGANAAYDRAWAASLTLIAFVMILNLVARAIARWKAPKTG 353
Cdd:COG0573  250 -RTLTALIALEFGEAPFGSLHYSALFALGLVLFVITLLVNLLARLIVRRYREKYG 303
phosphate_pstC TIGR02138
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity ...
 78-348 6.48e-34

phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273992 [Multi-domain]  Cd Length: 295  Bit Score: 126.61  E-value: 6.48e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731   78 DRIATGLVWTAFLIAVVPLVSLIWTTVARGV------KVLDVYFLTHSMGIVADSQPGGGIYHAIIGSLEQVGLATIIAA 151
Cdd:TIGR02138   1 EKIFKGLLLFSAVIIVLVLLLIVLFLLYEAIpafeknGILNFLTGTVWDPGSGPVQEQYGALPLIVGTLITSLIALLIAV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731  152 PIGVLTAIYLVEYGRGGLARSVTFFVDVMTGIPSIVAGLF-----------------ILSLMLIFDMEPFGFAGSLALAI 214
Cdd:TIGR02138  81 PVGIGIAIFLSEIAPKRVRSVLKPVVELLAGIPSVVYGFWglfvlvpflkphfqpflGSNLGLIPLFGGPILTAGIVLAI 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731  215 LMMPIVVRSTEEMLKLVSNELREASLALGVPKWRTILKVVLPTSIGGITTGIMLAVARIAGETAPVLLLVfGNRFINN-- 292
Cdd:TIGR02138 161 MILPTIASISRDALRAVPRSYKEASYALGATKWETIRRVILPAARSGIVGAVVLGLGRALGETMAVTMVI-GNVFPISpl 239

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 512057731  293 NPFDGAqQSLPLYIYQQYANSAGANAAYDRAWAASLTLIAFVMILNLVARAIARWK 348
Cdd:TIGR02138 240 SLFDPG-TTITSLIANQFGEASGGSVHTSALFALGLVLFVITLLVNILARYIVRRR 294
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
53-348 3.40e-16

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 79.43  E-value: 3.40e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731  53 LIAALLFLVSTYVIA----ASVEGRRQAKDRIATG---------LVWTAFLIAVVPLVSLIWTTVARGVKvlDVYFLTHS 119
Cdd:COG1178  250 LLVLLLLLLERRLRRrrryATVGGRARRPRRVKLGrwrwlalalCLLLVLLGLLLPLLALLLWSLTKALD--DNLTLDNY 327

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 120 MGIVADSqpggGIYHAIIGSLEQVGLATIIAAPIGVLTAiYLVEYGRGGLARSVTFFVDVMTGIPSIVAGLfilSLMLIF 199
Cdd:COG1178  328 RFVLLDP----SLLRALLNSLLLALLAALLAVLLALLLA-YLVRRRRGRLARLLDRLAMLPYAVPGIVLGL---GLLLLF 399

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 200 -DMEPFGFAGS-----LALAILMMPIVVRSTEEMLKLVSNELREASLALGVPKWRTILKVVLPTSIGGITTGIMLAVARI 273
Cdd:COG1178  400 nRPLPLLLYGTlailvLAYVVRFLPFALRSLEAALAQIDPSLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLVFVTS 479

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 512057731 274 AGETAPVLLLVfgnrfinnnPFDgaQQSLPLYIYQQYANSAGANAAydrawAASLTLIAFVMILNLVARAIARWK 348
Cdd:COG1178  480 MKELSATLLLR---------PPG--FETLAVLIYQLASSGRYGEAA-----ALALLLVLVSLLPVLLLERLLGRR 538
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 136-290 2.22e-15

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 73.47  E-value: 2.22e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 136 IIGSLEQVGLATIIAAPIGVLTAIYLVEYgRGGLARSVTFFVDVMTGIPSIVAGLFILSLMLIFDMEP----FGFAGSLA 211
Cdd:cd06261    1 LLNTLLLALIATLLALVLGLLLGIILARK-RGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGilpgLGLPALIL 79

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 512057731 212 LAILMMPIVVRSTEEMLKLVSNELREASLALGVPKWRTILKVVLPTSIGGITTGIMLAVARIAGETAPVLLLVFGNRFI 290
Cdd:cd06261   80 ALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPG 158
CysU COG0555
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 89-347 1.70e-12

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440321 [Multi-domain]  Cd Length: 268  Bit Score: 66.70  E-value: 1.70e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731  89 FLIAVVPLVSLIWTTVARGVKVLdvyflthsMGIVADSQpgggIYHAIIGSLEQVGLATIIAAPIGVLTAIYLVEYgRGG 168
Cdd:COG0555   21 SLIVLLPLAALVLKAAGLGWAEF--------WAVLTSPR----VLAALKLSLGTALIAALINLVFGLPLAWVLVRY-RFP 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 169 LARSVTFFVDVMTGIPSIVAGLfilSLMLIFD--------MEPFG--FAGS-----LALAILMMPIVVRSTEEMLKLVSN 233
Cdd:COG0555   88 GKRLVDALVDLPFALPTAVAGI---ALLLLFGpngwlgqlLAPLGikVAFTplgivLAQTFVSLPFVVRTVQPVLEELDP 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 234 ELREASLALGVPKWRTILKVVLPTSIGGITTGIMLAVARIAGETAPVLLLVfGNrfinnnpFDGAQQSLPLYIYQQYANS 313
Cdd:COG0555  165 ELEEAAATLGASRWQTFRRVILPLLLPALLTGFALAFARALGEFGAVIFIA-GN-------LPMKTEILPLLIYLKLEEG 236

                        250       260       270
                 ....*....|....*....|....*....|....
gi 512057731 314 aganaAYDRAWAASLTLIAFVMILNLVARAIARW 347
Cdd:COG0555  237 -----DYAGATAIALVLLLISFLLLLLINLLQRR 265
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 154-354 1.33e-10

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 59.62  E-value: 1.33e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731  154 GVLTAIYLVEYGRGGLARSVTFFVDVMTGIPSIVAgLFILSLMLIFDMEPFGFAGSLALAILMMPIVVRST-EEMLKLVS 232
Cdd:pfam00528   1 GIPLGIIAALRRGRRLDRLLRPLIDLLQALPSFVL-AILLVVIAILSILGHGILPAIILALLGWAGYARLIrRAALRSLP 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731  233 NELREASLALGVPKWRTILKVVLPTSIGGITTGIMLAVARIAGETAPVLllvfgnrFINNNPFDGAQQSLPLYIYQqyan 312
Cdd:pfam00528  80 SDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLE-------FLGSWPGLGLLLIEAILGYD---- 148

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 512057731  313 saganaaYDRAWAASLTLIAFVMILNLVARAIARWKAPKTGR 354
Cdd:pfam00528 149 -------YPEIQGPVLAAALILLLLNLLVDILQRLLDPRVRK 183
PotC COG1177
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ...
 131-351 5.81e-10

ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];


Pssm-ID: 440790 [Multi-domain]  Cd Length: 262  Bit Score: 58.97  E-value: 5.81e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 131 GIYHAIIGSLEQVGLATIIAAPIGVLTAIYLVEYgRGGLARSVTFFVDVMTGIPSIVAGLFILSLMLIFDMEPFGFAGSL 210
Cdd:COG1177   58 RLLDALLNSLLIALLSTLLATVLGTPAALALARY-RFRGRRLLLALLLLPLVVPGIVLGVALLLLFSALGLSGGLWGLIL 136

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 211 ALAILMMPIVVRSTEEMLKLVSNELREASLALGVPKWRTILKVVLPTSIGGITTGIMLAVARIAGETAPVLLLVfgnrfi 290
Cdd:COG1177  137 AHVVFTLPFVVLVVLARLQGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVITLFLA------ 210

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 512057731 291 nnnpfDGAQQSLPLYIYQQYANSAGANAAydrawAASLTLIAFVMILNLVARAIARWKAPK 351
Cdd:COG1177  211 -----GPGVTTLPVYIYSMIRRGISPEIN-----ALSTLLILLSLLLLLLAERLRRRGERR 261
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
73-346 1.61e-09

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 59.02  E-value: 1.61e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731  73 RRQAKDRIATGLVWTAFLIAVVPLVSLIWTTVARGvkvldvyfLTHSMGIVADSqpggGIYHAIIGSLEQVGLATIIAAP 152
Cdd:COG1178    5 PRRRPRLLLLLLALLLALLVLLPLLALLLRAFTDG--------LANFWALLSDP----YLWRALGNTLLLALLVTLLSLL 72

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 153 IGVLTAiYLVEYGRGGLARSVTFFVDVMTGIPSIVAGLFILS-----------LMLIFDMEPF---GFAG-SLALAILMM 217
Cdd:COG1178   73 LGVPLA-WLLARTDFPGRRLLRWLLLLPLALPPYVVALAWIAlfgpngllntlLRALFGLEPPdiyGLGGiILVLVLFNY 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 218 PIVVRSTEEMLKLVSNELREASLALGVPKWRTILKVVLPTSIGGITTGIMLAVARIAGETAPVllLVFGNRFinnnpfdg 297
Cdd:COG1178  152 PYVYLLLRAALRSIDASLEEAARSLGASPWRAFRRVTLPLLRPAIAAGALLVFLLCLADFGTP--LVLGGGY-------- 221

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 512057731 298 aqQSLPLYIYQQYANSAGANAAYdrawAASLTLIAFVMILNLVARAIAR 346
Cdd:COG1178  222 --TTLTTAIYQAWLGDFDLGAAA----ALALVLLLLVLLLLLLERRLRR 264
cysT CHL00187
sulfate transport protein; Provisional
 145-310 4.01e-08

sulfate transport protein; Provisional


Pssm-ID: 214388 [Multi-domain]  Cd Length: 237  Bit Score: 53.48  E-value: 4.01e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 145 LATIIAAPIGVLTAIYLVEYGRGGlARSVTFFVDVMTGIPSIVAGL----------FILSLMLIFDME-PFGFAG-SLAL 212
Cdd:CHL00187  66 IAALINGFFGLLIAWVLVRYNFPG-KRLLDAAVDLPFALPTSVAGLtlatvygdngWIGHLLSHLGIQiVFTKLGvLLAM 144

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 213 AILMMPIVVRSTEEMLKLVSNELREASLALGVPKWRTILKVVLPTSIGGITTGIMLAVARIAGETAPVLLLVfgnrfiNN 292
Cdd:CHL00187 145 IFVSFPFVVRTIQPVLQEIEKELEEAAWSLGASPWQTFWKVIFPPLIPALLTGLALTFSRAIGEYGSIVIIS------SN 218

                        170
                 ....*....|....*...
gi 512057731 293 NPFDGaqQSLPLYIYQQY 310
Cdd:CHL00187 219 IPFKD--LVASVLIFQSL 234
pstC PRK11275
phosphate ABC transporter permease PstC;
136-294 6.53e-08

phosphate ABC transporter permease PstC;


Pssm-ID: 183070  Cd Length: 319  Bit Score: 53.55  E-value: 6.53e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 136 IIGSLEQVGLATIIAAPIGVLTAIYLVEYGRGGLARSVTFFVDVMTGIPSIVAG---LFILSLML--------------- 197
Cdd:PRK11275  75 IYGTLVTSFIALLIAVPVSFGIALFLTELAPGWLKRPLGIAIELLAAIPSIVYGmwgLFVFAPLFatyfqepvgnvlsni 154

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 198 -----IFDMEPFG---FAGSLALAILMMPIVVRSTEEMLKLVSNELREASLALGVPKWRTILKVVLPTSIGGITTGIMLA 269
Cdd:PRK11275 155 pivgaLFSGPAFGigiLAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLG 234

                        170       180
                 ....*....|....*....|....*
gi 512057731 270 VARIAGETAPVlLLVFGNRFINNNP 294
Cdd:PRK11275 235 LGRALGETMAV-TFIIGNTYQLDSA 258
TauC COG0600
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion ...
 130-347 4.10e-07

ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440365 [Multi-domain]  Cd Length: 254  Bit Score: 50.53  E-value: 4.10e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 130 GGIYHAIIGSLEQVGLATIIAAPIGVLTAIYLVEYGRggLARSVTFFVDVMTGIPSIVaglFILSLMLIFdmePFGFAGS 209
Cdd:COG0600   57 GELWEHLLASLLRVLLGFALAALLGVPLGLLLGLSRL--LRRLLDPLLVFLRPIPPLA---LAPLLILWF---GIGEASK 128

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 210 LALAILM-MPIVVRSTEEMLKLVSNELREASLALGVPKWRTILKVVLPTSIGGITTGIMLAVAR-----IAGETApvlll 283
Cdd:COG0600  129 IFVIFLGaFFPILLNTAAGVRSVDPELLELARSLGASRWQILRKVVLPAALPYIFTGLRIALGLawiglVVAELL----- 203

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 512057731 284 vfgnrfinnnpfdGAQQSLPLYIYQqyansAGANAAYDRAWAASLTLIAFVMILNLVARAIARW 347
Cdd:COG0600  204 -------------GASSGLGYLILD-----ARQLLDTDLVFAAILVIGLLGLLLDLLLRLLERR 249
DppC COG1173
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid ...
 143-271 1.35e-06

ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism];


Pssm-ID: 440786 [Multi-domain]  Cd Length: 275  Bit Score: 48.96  E-value: 1.35e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 143 VGLATIIAAPIGVLTAiylveYGRGGLARSVTFFVDVMTGIPSIvagLFILSLMLIFDMEPFGFAgsLALAILMMPI--- 219
Cdd:COG1173   89 VLIALVIGVLLGLLAG-----YFGGWVDAVLMRLVDVLLAFPSL---LLAIALVAVLGPGLLNVI--LALGLTGWPGyar 158

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 512057731 220 VVRSteEMLKLVSNELREASLALGVPKWRTILKVVLPTSIGGITTGIMLAVA 271
Cdd:COG1173  159 LVRA--QVLSLREREYVEAARALGASPLRIIFRHILPNVLPPLIVQATLGIA 208
PRK10971 PRK10971
sulfate/thiosulfate ABC transporter permease CysT;
144-339 5.77e-05

sulfate/thiosulfate ABC transporter permease CysT;


Pssm-ID: 182873  Cd Length: 277  Bit Score: 44.36  E-value: 5.77e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 144 GLATIIAAPIGVLTAIYLVEYGRGGLARsVTFFVDVMTGIPSIVAGLFILSLMLI----------FDME-PFGFAG-SLA 211
Cdd:PRK10971  68 FVASIFNAVFGLLMAWILTRYRFPGRTL-LDALMDLPFALPTAVAGLTLASLFSVngwygewlakFDIKvTYTWLGiAVA 146

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 212 LAILMMPIVVRSTEEMLKLVSNELREASLALGVPKWRTILKVVLPTSIGGITTGIMLAVARIAGETAPVLllvfgnrFIN 291
Cdd:PRK10971 147 MAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGVALSFTRSLGEFGAVI-------FIA 219

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 512057731 292 NN-PFDGAQQSLPLYIYQQYANSAGANAAYDRAWAASLTLIAFVMILNL 339
Cdd:PRK10971 220 GNiAWKTEVTSLMIFVRLQEFDYPAASAIASVILAASLLLLFSINTLQS 268
ABC_perm1 NF038017
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ...
 139-287 9.18e-04

ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.


Pssm-ID: 411610 [Multi-domain]  Cd Length: 184  Bit Score: 39.84  E-value: 9.18e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 139 SLEQVGLATIIAAPIGVLTAIYLVEYGRGGlARSVTFFVDVMTGIPSIVAGLFIlsLMLIFDMEPFGFAGSL-------- 210
Cdd:NF038017   1 SLRVSGTATLIAALIGIPLGALLALRRFPG-RRLVISLLNTLMGLPPVVVGLIV--YLLLSRSGPLGFLGLLytptamii 77

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 512057731 211 ALAILMMPIVVRSTEEMLKLVSNELREASLALGVPKWRTILkVVLPTSIGGITTGIMLAVARIAGETAPVlLLVFGN 287
Cdd:NF038017  78 AQAVLALPIVAGLTLAAVQGLDPELRLQILSLGATRWQALW-TLLKEARFALLAAVLAGFGRAISEVGAV-MMVGGN 152
PhnU2 TIGR03262
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ...
 129-256 1.09e-03

putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 274495 [Multi-domain]  Cd Length: 546  Bit Score: 40.82  E-value: 1.09e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731  129 GGGIYHAIIGSLeQVGLATIIAAPIGVLTAIYLVEYGRG-GLARSVTFFVDVMT-GIPSIVAGLfilSLMLIFDM--EPF 204
Cdd:TIGR03262 327 DGGGWEAYKNSL-RLAATTALIGTILVFGGAYLIEKTRGfGLLRGVLRFLAILPmAVPGLVLGL---GYIFFFNAptNPL 402

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 512057731  205 GFA-GSLALAILMMPIVVRSTEEM-----LKLVSNELREASLALGVPKWRTILKVVLP 256
Cdd:TIGR03262 403 NGLyGTMALLVLCTVVHFYTVSHLtavtaLKQIDSEFEAVSASLKVPFYKTFLRVTLP 460
DppB COG0601
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid ...
 139-271 2.52e-03

ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism];


Pssm-ID: 440366 [Multi-domain]  Cd Length: 314  Bit Score: 39.28  E-value: 2.52e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 139 SLEQVGLATIIAAPIGVLTAIYLVEYGRGGLARSVTFFVDVMTGIPSIVAGLFilsLMLIF-----------DMEPFGFA 207
Cdd:COG0601   98 TLELALLALLLALLIGIPLGILAALRRGSWLDRLITVLALLGISIPSFWLGLL---LILLFavklgwlpvsgRVSPWEDF 174

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 512057731 208 GS---------LALAILMMPIVVRST-EEMLklvsNELRE----ASLALGVPKWRTILKVVLPTSIGGITTGIMLAVA 271
Cdd:COG0601  175 LDalrhlilpaLTLALGSLAGIARLTrSSML----EVLGQdyvrTARAKGLSERRVLLRHALRNALIPVVTVLGLQLG 248
HisM COG0765
ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; ...
 145-256 4.38e-03

ABC-type amino acid transport system, permease component [Amino acid transport and metabolism];


Pssm-ID: 440528 [Multi-domain]  Cd Length: 218  Bit Score: 38.13  E-value: 4.38e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 145 LATIIAAPIGVLTAIYLVeYGRGGLARSVTFFVDVMTGIPSIVAgLFILSLML---IFDMEPFgFAGSLALAILM---MP 218
Cdd:COG0765   28 LAIVLGLVLGLLLALARL-SPNPVLRWLATAYVEFFRGTPLLVQ-LFFIYFGLpllGIDLSPF-VAAVIALTLNSaayLA 104

                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 512057731 219 IVVRSTeemLKLVSNELREASLALGVPKWRTILKVVLP 256
Cdd:COG0765  105 EIVRAG---IQSVPKGQWEAARALGLSRWQTMRRIILP 139
PotB COG1176
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ...
 210-346 7.63e-03

ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];


Pssm-ID: 440789 [Multi-domain]  Cd Length: 287  Bit Score: 37.82  E-value: 7.63e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057731 210 LALAILMMPIVVRSTEEMLKLVSNELREASLALGVPKWRTILKVVLPTSIGGITTGIMLAVARIAGETAPVLLLVfgnrf 289
Cdd:COG1176  159 IGLVYVYLPFMVLPLYAALEKIDPSLLEAARDLGASPWQTFRRVILPLSLPGIIAGSLLVFIPALGAFVTPALLG----- 233

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 512057731 290 innnpfDGAQQSLPLYIYQQYansaGANAAYDRAWAASLTLIAFVMILNLVARAIAR 346
Cdd:COG1176  234 ------GGKVLMIGNLIYQQF----LSALNWPLAAALAVVLLLIVLLVLLLYLRLLR 280
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH