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Conserved domains on  [gi|512057732|gb|EPD57219|]
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phosphate ABC transporter, permease PstC [Streptomyces sp. HGB0020]

Protein Classification

PstC family ABC transporter permease( domain architecture ID 11426308)

PstC family ABC transporter permease is the transmembrane subunit (TM) found in periplasmic binding protein (PBP)-dependent ATP-binding cassette (ABC) transporters; similar to phosphate transport system permease protein PstC

Gene Ontology:  GO:0140359|GO:0042626|GO:0043190|GO:0016020
PubMed:  25750732|24638992|18535149|17723295
TCDB:  3.A.1

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PstC COG0573
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 19-332 2.94e-114

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


:

Pssm-ID: 440338 [Multi-domain]  Cd Length: 303  Bit Score: 333.21  E-value: 2.94e-114
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  19 ATEQKRAARGATRPGDRIFLGLSRGSGILLLVIMAAIAVFLTYRAYLAISED-HTNFLTTFEWNTNIHPASFGIAVLAYG 97
Cdd:COG0573    2 SSSRLRPRRRRRRLGDRLFRGLLLLAALLSILILLLIVLFLLIESLPAFQEVgLLEFLTGTEWNPVSSNGEFGILPLIVG 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  98 TVISSIIAMVIAVPIAVAIALFLTHYAPRRLAGPIAYVIDLLAAVPSIVYGLWGALILVPHMNGLFGWLndyfswtglfs 177
Cdd:COG0573   82 TLLVSLIALLIAVPLGLGIAIFLSEYAPPRLRRILKPAIELLAGIPSVVYGFWGLFVLVPLLRDLFPWP----------- 150

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 178 weeGAPRSMLTVGILLAIMILPVITNVSREVFRQAPQMIEEAALALGATRWEVIRMAVLPFGRSGVISASMLGLGRALGE 257
Cdd:COG0573  151 ---PSGFSLLTAGIVLAIMILPTITSLSRDALRAVPRSLREAALALGATRWETIRKVVLPAARSGIIAAVILGLGRALGE 227

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 512057732 258 TMAVATVLSPDFLIHASLLNPgGGTFAQNIASKFGEADEFG--RDALIASGLVLFVITLLVNGAARMIIARRKEYSG 332
Cdd:COG0573  228 TMAVLMVAGNAPQIPFSLFDP-GRTLTALIALEFGEAPFGSlhYSALFALGLVLFVITLLVNLLARLIVRRYREKYG 303
 
Name Accession Description Interval E-value
PstC COG0573
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 19-332 2.94e-114

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440338 [Multi-domain]  Cd Length: 303  Bit Score: 333.21  E-value: 2.94e-114
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  19 ATEQKRAARGATRPGDRIFLGLSRGSGILLLVIMAAIAVFLTYRAYLAISED-HTNFLTTFEWNTNIHPASFGIAVLAYG 97
Cdd:COG0573    2 SSSRLRPRRRRRRLGDRLFRGLLLLAALLSILILLLIVLFLLIESLPAFQEVgLLEFLTGTEWNPVSSNGEFGILPLIVG 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  98 TVISSIIAMVIAVPIAVAIALFLTHYAPRRLAGPIAYVIDLLAAVPSIVYGLWGALILVPHMNGLFGWLndyfswtglfs 177
Cdd:COG0573   82 TLLVSLIALLIAVPLGLGIAIFLSEYAPPRLRRILKPAIELLAGIPSVVYGFWGLFVLVPLLRDLFPWP----------- 150

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 178 weeGAPRSMLTVGILLAIMILPVITNVSREVFRQAPQMIEEAALALGATRWEVIRMAVLPFGRSGVISASMLGLGRALGE 257
Cdd:COG0573  151 ---PSGFSLLTAGIVLAIMILPTITSLSRDALRAVPRSLREAALALGATRWETIRKVVLPAARSGIIAAVILGLGRALGE 227

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 512057732 258 TMAVATVLSPDFLIHASLLNPgGGTFAQNIASKFGEADEFG--RDALIASGLVLFVITLLVNGAARMIIARRKEYSG 332
Cdd:COG0573  228 TMAVLMVAGNAPQIPFSLFDP-GRTLTALIALEFGEAPFGSlhYSALFALGLVLFVITLLVNLLARLIVRRYREKYG 303
phosphate_pstC TIGR02138
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity ...
 34-328 2.42e-88

phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273992 [Multi-domain]  Cd Length: 295  Bit Score: 266.83  E-value: 2.42e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732   34 DRIFLGLSRGSGILLLVIMAAIAVFLTYRAYLAISED-HTNFLTTFEWNTNIHPA--SFGIAVLAYGTVISSIIAMVIAV 110
Cdd:TIGR02138   1 EKIFKGLLLFSAVIIVLVLLLIVLFLLYEAIPAFEKNgILNFLTGTVWDPGSGPVqeQYGALPLIVGTLITSLIALLIAV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  111 PIAVAIALFLTHYAPRRLAGPIAYVIDLLAAVPSIVYGLWGALILVPHMNGLFG-WLNDYFSWTGLFSWeegaprSMLTV 189
Cdd:TIGR02138  81 PVGIGIAIFLSEIAPKRVRSVLKPVVELLAGIPSVVYGFWGLFVLVPFLKPHFQpFLGSNLGLIPLFGG------PILTA 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  190 GILLAIMILPVITNVSREVFRQAPQMIEEAALALGATRWEVIRMAVLPFGRSGVISASMLGLGRALGETMAVATVLSPDF 269
Cdd:TIGR02138 155 GIVLAIMILPTIASISRDALRAVPRSYKEASYALGATKWETIRRVILPAARSGIVGAVVLGLGRALGETMAVTMVIGNVF 234

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 512057732  270 LIHASLLNPGGGTFAQNIASKFGEA--DEFGRDALIASGLVLFVITLLVNGAARMIIARRK 328
Cdd:TIGR02138 235 PISPLSLFDPGTTITSLIANQFGEAsgGSVHTSALFALGLVLFVITLLVNILARYIVRRRR 295
pstC PRK11275
phosphate ABC transporter permease PstC;
20-333 2.72e-64

phosphate ABC transporter permease PstC;


Pssm-ID: 183070  Cd Length: 319  Bit Score: 206.08  E-value: 2.72e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  20 TEQKRAARGATRPGDRIFLGLSRGSGILLLVIMAAIAVFLTYRAYLAISEDHTNFLTTFEWNTNIHpaSFGIAVLAYGTV 99
Cdd:PRK11275   2 AATKPAFNAPGKKGDIIFSALVKLAALITLLLLGGIIVSLIISSWPSIQKFGLSFLWTKEWDAPND--IYGALVPIYGTL 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 100 ISSIIAMVIAVPIAVAIALFLTHYAPRRLAGPIAYVIDLLAAVPSIVYGLWGALILVPHMNGLFGW-LNDYFSWT----G 174
Cdd:PRK11275  80 VTSFIALLIAVPVSFGIALFLTELAPGWLKRPLGIAIELLAAIPSIVYGMWGLFVFAPLFATYFQEpVGNVLSNIpivgA 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 175 LFSweeGAPRS--MLTVGILLAIMILPVITNVSREVFRQAPQMIEEAALALGATRWEVIRMAVLPFGRSGVISASMLGLG 252
Cdd:PRK11275 160 LFS---GPAFGigILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLGLG 236

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 253 RALGETMAVATVL-SPDFLIHASLLNPgGGTFAQNIASKFGEADE-FGRDALIASGLVLFVITLLVNGAARMIIARRKEY 330
Cdd:PRK11275 237 RALGETMAVTFIIgNTYQLDSASLYMP-GNSITSALANEFAEAESgLHTAALMELGLILFVITFIVLAASKLMIMRLAKN 315


                 ...
gi 512057732 331 SGA 333
Cdd:PRK11275 316 EGA 318
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 95-271 7.97e-14

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 68.84  E-value: 7.97e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  95 AYGTVISSIIAMVIAVPIAVAIALFLTHYaPRRLAGPIAYVIDLLAAVPSIVYGLWGALILVPHMNGLFGWLndyfswtg 174
Cdd:cd06261    1 LLNTLLLALIATLLALVLGLLLGIILARK-RGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPG-------- 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 175 lfsweegaprSMLTVGILLAIMILPVITNVSREVFRQAPQMIEEAALALGATRWEVIRMAVLPFGRSGVISASMLGLGRA 254
Cdd:cd06261   72 ----------LGLPALILALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARA 141

                        170
                 ....*....|....*..
gi 512057732 255 LGETMAVATVLSPDFLI 271
Cdd:cd06261  142 LGEFALVSFLGGGEAPG 158
ABC_perm1 NF038017
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ...
 98-264 1.48e-10

ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.


Pssm-ID: 411610 [Multi-domain]  Cd Length: 184  Bit Score: 59.48  E-value: 1.48e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  98 TVISSIIAMVIAVPIAVAIALflTHYAPRRLagpIAYVIDLLAAVPSIVYGLWGALILvpHMNGLFGWLNDYFSwtglfs 177
Cdd:NF038017   5 SGTATLIAALIGIPLGALLAL--RRFPGRRL---VISLLNTLMGLPPVVVGLIVYLLL--SRSGPLGFLGLLYT------ 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 178 weegaPRSMLtvgILLAIMILPVITNVSREVFRQAPQMIEEAALALGATRWEVIrMAVLPFGRSGVISASMLGLGRALGE 257
Cdd:NF038017  72 -----PTAMI---IAQAVLALPIVAGLTLAAVQGLDPELRLQILSLGATRWQAL-WTLLKEARFALLAAVLAGFGRAISE 142


                 ....*..
gi 512057732 258 TMAVATV 264
Cdd:NF038017 143 VGAVMMV 149
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 113-328 2.25e-07

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 50.38  E-value: 2.25e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  113 AVAIALFLTHYAPRRLAGPIAYVIDLLAAVPSIVyglWGALILVPHMNGLFGWLndyfswtglfsweegaprsMLTVGIL 192
Cdd:pfam00528   1 GIPLGIIAALRRGRRLDRLLRPLIDLLQALPSFV---LAILLVVIAILSILGHG-------------------ILPAIIL 58

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  193 LAIMILPVITNVSREVFRQAPQMIEEAALALGATRWEVIRMAVLPFGRSGVISASMLGLGRALGETMAVATVLSpdflih 272
Cdd:pfam00528  59 ALLGWAGYARLIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGS------ 132

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 512057732  273 asllnpGGGTFAQNIASKFGEADEFGRDALIASGLVLFVITLLVNGAARMIIARRK 328
Cdd:pfam00528 133 ------WPGLGLLLIEAILGYDYPEIQGPVLAAALILLLLNLLVDILQRLLDPRVR 182
 
Name Accession Description Interval E-value
PstC COG0573
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 19-332 2.94e-114

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440338 [Multi-domain]  Cd Length: 303  Bit Score: 333.21  E-value: 2.94e-114
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  19 ATEQKRAARGATRPGDRIFLGLSRGSGILLLVIMAAIAVFLTYRAYLAISED-HTNFLTTFEWNTNIHPASFGIAVLAYG 97
Cdd:COG0573    2 SSSRLRPRRRRRRLGDRLFRGLLLLAALLSILILLLIVLFLLIESLPAFQEVgLLEFLTGTEWNPVSSNGEFGILPLIVG 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  98 TVISSIIAMVIAVPIAVAIALFLTHYAPRRLAGPIAYVIDLLAAVPSIVYGLWGALILVPHMNGLFGWLndyfswtglfs 177
Cdd:COG0573   82 TLLVSLIALLIAVPLGLGIAIFLSEYAPPRLRRILKPAIELLAGIPSVVYGFWGLFVLVPLLRDLFPWP----------- 150

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 178 weeGAPRSMLTVGILLAIMILPVITNVSREVFRQAPQMIEEAALALGATRWEVIRMAVLPFGRSGVISASMLGLGRALGE 257
Cdd:COG0573  151 ---PSGFSLLTAGIVLAIMILPTITSLSRDALRAVPRSLREAALALGATRWETIRKVVLPAARSGIIAAVILGLGRALGE 227

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 512057732 258 TMAVATVLSPDFLIHASLLNPgGGTFAQNIASKFGEADEFG--RDALIASGLVLFVITLLVNGAARMIIARRKEYSG 332
Cdd:COG0573  228 TMAVLMVAGNAPQIPFSLFDP-GRTLTALIALEFGEAPFGSlhYSALFALGLVLFVITLLVNLLARLIVRRYREKYG 303
phosphate_pstC TIGR02138
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity ...
 34-328 2.42e-88

phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273992 [Multi-domain]  Cd Length: 295  Bit Score: 266.83  E-value: 2.42e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732   34 DRIFLGLSRGSGILLLVIMAAIAVFLTYRAYLAISED-HTNFLTTFEWNTNIHPA--SFGIAVLAYGTVISSIIAMVIAV 110
Cdd:TIGR02138   1 EKIFKGLLLFSAVIIVLVLLLIVLFLLYEAIPAFEKNgILNFLTGTVWDPGSGPVqeQYGALPLIVGTLITSLIALLIAV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  111 PIAVAIALFLTHYAPRRLAGPIAYVIDLLAAVPSIVYGLWGALILVPHMNGLFG-WLNDYFSWTGLFSWeegaprSMLTV 189
Cdd:TIGR02138  81 PVGIGIAIFLSEIAPKRVRSVLKPVVELLAGIPSVVYGFWGLFVLVPFLKPHFQpFLGSNLGLIPLFGG------PILTA 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  190 GILLAIMILPVITNVSREVFRQAPQMIEEAALALGATRWEVIRMAVLPFGRSGVISASMLGLGRALGETMAVATVLSPDF 269
Cdd:TIGR02138 155 GIVLAIMILPTIASISRDALRAVPRSYKEASYALGATKWETIRRVILPAARSGIVGAVVLGLGRALGETMAVTMVIGNVF 234

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 512057732  270 LIHASLLNPGGGTFAQNIASKFGEA--DEFGRDALIASGLVLFVITLLVNGAARMIIARRK 328
Cdd:TIGR02138 235 PISPLSLFDPGTTITSLIANQFGEAsgGSVHTSALFALGLVLFVITLLVNILARYIVRRRR 295
pstC PRK11275
phosphate ABC transporter permease PstC;
20-333 2.72e-64

phosphate ABC transporter permease PstC;


Pssm-ID: 183070  Cd Length: 319  Bit Score: 206.08  E-value: 2.72e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  20 TEQKRAARGATRPGDRIFLGLSRGSGILLLVIMAAIAVFLTYRAYLAISEDHTNFLTTFEWNTNIHpaSFGIAVLAYGTV 99
Cdd:PRK11275   2 AATKPAFNAPGKKGDIIFSALVKLAALITLLLLGGIIVSLIISSWPSIQKFGLSFLWTKEWDAPND--IYGALVPIYGTL 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 100 ISSIIAMVIAVPIAVAIALFLTHYAPRRLAGPIAYVIDLLAAVPSIVYGLWGALILVPHMNGLFGW-LNDYFSWT----G 174
Cdd:PRK11275  80 VTSFIALLIAVPVSFGIALFLTELAPGWLKRPLGIAIELLAAIPSIVYGMWGLFVFAPLFATYFQEpVGNVLSNIpivgA 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 175 LFSweeGAPRS--MLTVGILLAIMILPVITNVSREVFRQAPQMIEEAALALGATRWEVIRMAVLPFGRSGVISASMLGLG 252
Cdd:PRK11275 160 LFS---GPAFGigILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLGLG 236

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 253 RALGETMAVATVL-SPDFLIHASLLNPgGGTFAQNIASKFGEADE-FGRDALIASGLVLFVITLLVNGAARMIIARRKEY 330
Cdd:PRK11275 237 RALGETMAVTFIIgNTYQLDSASLYMP-GNSITSALANEFAEAESgLHTAALMELGLILFVITFIVLAASKLMIMRLAKN 315


                 ...
gi 512057732 331 SGA 333
Cdd:PRK11275 316 EGA 318
PstA COG0581
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 47-326 7.15e-39

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440346 [Multi-domain]  Cd Length: 259  Bit Score: 138.25  E-value: 7.15e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  47 LLLVIMAAIAVFLTYRAYLAISEDhtnFLTTFewnTNIHPASFGIAVLAYGTVISSIIAMVIAVPIAVAIALFLTHYAPR 126
Cdd:COG0581    1 LALLPLVWILGTVLVKGLPALSWE---FLTSS---PSPGPEGGGILPAIVGTLLLVLLATLIAVPLGVLAAIYLAEYARG 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 127 -RLAGPIAYVIDLLAAVPSIVYGLWGALILVPHMnglfgwlndyfswtglfsweeGAPRSMLTVGILLAIMILPVITNVS 205
Cdd:COG0581   75 gRLARLIRFAIDVLAGVPSIVYGLFGYALFVLTL---------------------GLGFSLLAGALALALLMLPVVIRTT 133

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 206 REVFRQAPQMIEEAALALGATRWEVIRMAVLPFGRSGVISASMLGLGRALGETMAV-ATVLSPDFLIHaSLLNPGG--GT 282
Cdd:COG0581  134 EEALRLVPNSLREASYALGATKWQTIRKVVLPAALPGILTGVILAIARAAGETAPLlFTAGVSPFLPL-SLFDPFAtlPV 212

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 512057732 283 FAQNIASkfgEADEFGRDALIASGLVLFVITLLVNGAARMIIAR 326
Cdd:COG0581  213 HIYNLAS---SPYPAAQELAWAAALVLLLLVLLLNLLARLLRRR 253
3a0107s02c TIGR00974
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ...
 34-329 9.98e-32

phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273373  Cd Length: 271  Bit Score: 119.65  E-value: 9.98e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732   34 DRIFLGLSRGSGILLLVIMAAIAVFLTYRAYLAISEDhtnfLTTFEWNTNIHPASFGIAVLayGTVISSIIAMVIAVPIA 113
Cdd:TIGR00974   1 DKIFTFISLLSALLALLPLIWILWYILIKGLPALNLE----FFTKSPTPTGAEGGIGPAIV--GTLLLTLLAIVIAVPLG 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  114 VAIALFLTHYAPR-RLAGPIAYVIDLLAAVPSIVYGLWGALILVphmnglfgwlNDYFSWTglfsweegapRSMLTVGIL 192
Cdd:TIGR00974  75 IGAAIYLAEYANGsRFTKIIRFAVDILAGVPSIVVGLFGYGFFV----------LTYLGGG----------FSLLAGALA 134

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  193 LAIMILPVITNVSREVFRQAPQMIEEAALALGATRWEVIRMAVLPFGRSGVISASMLGLGRALGETMA--VATVLSPDFL 270
Cdd:TIGR00974 135 LALLILPVIIRTTEEALKAVPKDLREASLALGATKWQTIFKVVLPAALPGILTGIILSIARAAGETAPllFTAGGSAFTP 214

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 512057732  271 IHASLLNPGGGTFAQNIASKfGEADEFGRDALIASgLVLFVITLLVNGAARMIIARRKE 329
Cdd:TIGR00974 215 PNLFDPFATLPVLIYNLASE-GPYVEAQQLAWAAA-LVLIVLVLLLNLIARLLRRRFKK 271
COG4590 COG4590
ABC-type uncharacterized transport system, permease component [General function prediction ...
 103-331 8.66e-17

ABC-type uncharacterized transport system, permease component [General function prediction only];


Pssm-ID: 443647 [Multi-domain]  Cd Length: 757  Bit Score: 81.43  E-value: 8.66e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 103 IIAMVIAVPIAVAIALFLTHYAPR--RLAGPIAYVIDLLaaVPSIVYGLWGALILVPHM-NGLFG-----WLNDyfswtg 174
Cdd:COG4590  526 VFSLLLLLPLGILLFAYLWSRLPEsiRNRVPEGWEAALL--IPVILLVGWLCFALSPPIeNAFFGgdmrqWLTN------ 597

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 175 lfswEEGAP---RSMLTVGILLAIMILPVITNVSREVFRQAPQMIEEAALALGATRWEVIRMAVLPFGRSGVISASMLGL 251
Cdd:COG4590  598 ----ELGITfdqRNALVVGIAMGFAVIPTIFSIAEDAIFSVPKHLTQGSLALGATPWQTLTRVVLLTASPGIFSAVMIGL 673

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 252 GRALGETMAV--ATVLSP--DFLIHAsllnpGGGTFAQNIASKFGEAdEFG----RdALIASGLVLFVITLLVNGAARMI 323
Cdd:COG4590  674 GRAVGETMIVlmATGNTPvmDFNIFE-----GMRTLSANIAVEMPES-EVGsthyR-VLFLAALVLFVFTFVFNTLAEIV 746


                 ....*....
gi 512057732 324 IAR-RKEYS 331
Cdd:COG4590  747 RQRlRKKYS 755
ModB COG4149
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and ...
 98-264 6.37e-14

ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and metabolism]; ABC-type molybdate transport system, permease component ModB is part of the Pathway/BioSystem: Molybdopterin biosynthesis


Pssm-ID: 443320 [Multi-domain]  Cd Length: 223  Bit Score: 69.69  E-value: 6.37e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  98 TVISSIIAMVIAVPIAVAIALFLTHYaPRRLAGPIAYVIDLLAAVPSIVYGLwgALILVPHMNGLFG-WLNDYFSWTGLF 176
Cdd:COG4149   12 SLKVALIATLLLLLLGIPLAWWLART-RFRGKGLLEALVTLPLVLPPTVLGF--YLLLLFGRNGPLGqLLEELFGISLVF 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 177 SWEegaprsmltvGILLA--IMILPVITNVSREVFRQAPQMIEEAALALGATRWEVIRMAVLPFGRSGVISASMLGLGRA 254
Cdd:COG4149   89 TWT----------GAVLAsvVVSLPLMVQPLRAAFEAVDPRLEEAARTLGASPWRVFFRVTLPLAKPGILAGAVLAFARA 158

                        170
                 ....*....|
gi 512057732 255 LGETMAVATV 264
Cdd:COG4149  159 LGEFGATLMF 168
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 95-271 7.97e-14

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 68.84  E-value: 7.97e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  95 AYGTVISSIIAMVIAVPIAVAIALFLTHYaPRRLAGPIAYVIDLLAAVPSIVYGLWGALILVPHMNGLFGWLndyfswtg 174
Cdd:cd06261    1 LLNTLLLALIATLLALVLGLLLGIILARK-RGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPG-------- 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 175 lfsweegaprSMLTVGILLAIMILPVITNVSREVFRQAPQMIEEAALALGATRWEVIRMAVLPFGRSGVISASMLGLGRA 254
Cdd:cd06261   72 ----------LGLPALILALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARA 141

                        170
                 ....*....|....*..
gi 512057732 255 LGETMAVATVLSPDFLI 271
Cdd:cd06261  142 LGEFALVSFLGGGEAPG 158
CysU COG0555
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 98-264 9.64e-12

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440321 [Multi-domain]  Cd Length: 268  Bit Score: 64.39  E-value: 9.64e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  98 TVISSIIAMVIAVPIAVAIALFLTHYAP--RRLagpIAYVIDLLAAVPSIVYGLwgALILVPHMNGLFGWLNDYFSWTGL 175
Cdd:COG0555   59 SLGTALIAALINLVFGLPLAWVLVRYRFpgKRL---VDALVDLPFALPTAVAGI--ALLLLFGPNGWLGQLLAPLGIKVA 133

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 176 FSWeegaprsmltVGILLAiMI---LPVITNVSREVFRQAPQMIEEAALALGATRWEVIRMAVLPFGRSGVISASMLGLG 252
Cdd:COG0555  134 FTP----------LGIVLA-QTfvsLPFVVRTVQPVLEELDPELEEAAATLGASRWQTFRRVILPLLLPALLTGFALAFA 202

                        170
                 ....*....|..
gi 512057732 253 RALGETMAVATV 264
Cdd:COG0555  203 RALGEFGAVIFI 214
pstA PRK11268
phosphate ABC transporter permease PstA;
90-258 1.34e-11

phosphate ABC transporter permease PstA;


Pssm-ID: 183065 [Multi-domain]  Cd Length: 295  Bit Score: 64.32  E-value: 1.34e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  90 GIAVLAYGTVISSIIAMVIAVPIAVAIALFLTHYAPR-RLAGPIAYVIDLLAAVPSIVYGLWGALILVPHMNGLFGWlnd 168
Cdd:PRK11268  78 GLANAIAGSGLLILWATVVGTPLGIMAGIYLAEYGRKsWLAEVIRFINDILLSAPSIVVGLFVYTIVVAQMEHFSGW--- 154

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 169 yfswTGLfsweegaprsmltvgILLAIMILPVITNVSREVFRQAPQMIEEAALALGATRWEVIRMAVLPFGRSGVISASM 248
Cdd:PRK11268 155 ----AGV---------------IALALLQIPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGVL 215

                        170
                 ....*....|
gi 512057732 249 LGLGRALGET 258
Cdd:PRK11268 216 LAIARIAGET 225
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
28-327 1.19e-10

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 62.49  E-value: 1.19e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  28 GATRPGDRIFLGLSR--GSGILLLVIMAAIAVFLTYRAYLAISEDHTNFLTTFEWNTNIHPASFGIAVLayGTVISSIIA 105
Cdd:COG1178  273 GRARRPRRVKLGRWRwlALALCLLLVLLGLLLPLLALLLWSLTKALDDNLTLDNYRFVLLDPSLLRALL--NSLLLALLA 350

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 106 MVIAVPIAVAIALFLTHYaPRRLAGPIAYVIDLLAAVPSIVYGLwGALILVPHMNGLfgwlndyfSWTGlfsweegaprS 185
Cdd:COG1178  351 ALLAVLLALLLAYLVRRR-RGRLARLLDRLAMLPYAVPGIVLGL-GLLLLFNRPLPL--------LLYG----------T 410

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 186 MLTVGILLAIMILPVITNVSREVFRQAPQMIEEAALALGATRWEVIRMAVLPFGRSGVISASMLGLGRALGETMAVATVL 265
Cdd:COG1178  411 LAILVLAYVVRFLPFALRSLEAALAQIDPSLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLVFVTSMKELSATLLLR 490

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 512057732 266 SPDFLIHASLLnpgggtFAQNIASKFGEAdefgrdALIAsgLVLFVITLLVNGAARMIIARR 327
Cdd:COG1178  491 PPGFETLAVLI------YQLASSGRYGEA------AALA--LLLVLVSLLPVLLLERLLGRR 538
PotC COG1177
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ...
 99-257 1.23e-10

ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];


Pssm-ID: 440790 [Multi-domain]  Cd Length: 262  Bit Score: 60.90  E-value: 1.23e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  99 VISSIIAMVIAVPIAVAIAlflthYAPRRLAGPIAYVIDLLAAVPSIVYGLwgALILVphmnglfgwlndyFSWTGLfsw 178
Cdd:COG1177   71 LLSTLLATVLGTPAALALA-----RYRFRGRRLLLALLLLPLVVPGIVLGV--ALLLL-------------FSALGL--- 127

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 512057732 179 eegaPRSMLTVGILLAIMILPVITNVSREVFRQAPQMIEEAALALGATRWEVIRMAVLPFGRSGVISASMLGLGRALGE 257
Cdd:COG1177  128 ----SGGLWGLILAHVVFTLPFVVLVVLARLQGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDE 202
ABC_perm1 NF038017
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ...
 98-264 1.48e-10

ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.


Pssm-ID: 411610 [Multi-domain]  Cd Length: 184  Bit Score: 59.48  E-value: 1.48e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  98 TVISSIIAMVIAVPIAVAIALflTHYAPRRLagpIAYVIDLLAAVPSIVYGLWGALILvpHMNGLFGWLNDYFSwtglfs 177
Cdd:NF038017   5 SGTATLIAALIGIPLGALLAL--RRFPGRRL---VISLLNTLMGLPPVVVGLIVYLLL--SRSGPLGFLGLLYT------ 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 178 weegaPRSMLtvgILLAIMILPVITNVSREVFRQAPQMIEEAALALGATRWEVIrMAVLPFGRSGVISASMLGLGRALGE 257
Cdd:NF038017  72 -----PTAMI---IAQAVLALPIVAGLTLAAVQGLDPELRLQILSLGATRWQAL-WTLLKEARFALLAAVLAGFGRAISE 142


                 ....*..
gi 512057732 258 TMAVATV 264
Cdd:NF038017 143 VGAVMMV 149
cysT CHL00187
sulfate transport protein; Provisional
 80-266 7.86e-09

sulfate transport protein; Provisional


Pssm-ID: 214388 [Multi-domain]  Cd Length: 237  Bit Score: 55.41  E-value: 7.86e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  80 WNTNIHPASFGIAVLAYG-TVISSIIAMVIAVPIAVAIALFLTHY--APRRLAGPIayvIDLLAAVPSIVYGLwgALILV 156
Cdd:CHL00187  41 WSDFLQKATEPIALSAYSlTLSMALIAALINGFFGLLIAWVLVRYnfPGKRLLDAA---VDLPFALPTSVAGL--TLATV 115

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 157 PHMNGLFGWLNDYFSWTGLFSweegaprsmlTVGILLAIMI--LPVITNVSREVFRQAPQMIEEAALALGATRWEVIRMA 234
Cdd:CHL00187 116 YGDNGWIGHLLSHLGIQIVFT----------KLGVLLAMIFvsFPFVVRTIQPVLQEIEKELEEAAWSLGASPWQTFWKV 185

                        170       180       190
                 ....*....|....*....|....*....|..
gi 512057732 235 VLPFGRSGVISASMLGLGRALGETMAVATVLS 266
Cdd:CHL00187 186 IFPPLIPALLTGLALTFSRAIGEYGSIVIISS 217
PotB COG1176
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ...
 88-332 3.55e-08

ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];


Pssm-ID: 440789 [Multi-domain]  Cd Length: 287  Bit Score: 54.00  E-value: 3.55e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  88 SFGIAVlaygtvISSIIAMVIAVPIAVAIALflthyAPRRLAGPIAYVIDLLAAVPSIV--YGLwgALILVPHmnglfGW 165
Cdd:COG1176   72 TLWIAL------LTTLICLLLGYPIAYFLAR-----APPRWRNLLLLLVILPFWTSFLVrtYAW--IVLLGRN-----GL 133

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 166 LNDYFSWTGLFSweegAPRSML--TVGILLAI-------MILPVITNVSRevfrqAPQMIEEAALALGATRWEVIRMAVL 236
Cdd:COG1176  134 LNSLLLALGLID----EPLRLLytEFAVVIGLvyvylpfMVLPLYAALEK-----IDPSLLEAARDLGASPWQTFRRVIL 204

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 237 PFGRSGVISASMLGLgralgeTMAVATVLSPDFLihasllnpGGG---TFAQNIASKFGEADEFGRDAliASGLVLFVIT 313
Cdd:COG1176  205 PLSLPGIIAGSLLVF------IPALGAFVTPALL--------GGGkvlMIGNLIYQQFLSALNWPLAA--ALAVVLLLIV 268

                        250
                 ....*....|....*....
gi 512057732 314 LLVNGAARMIIARRKEYSG 332
Cdd:COG1176  269 LLVLLLYLRLLRRRRLLGG 287
modB PRK09421
molybdate ABC transporter permease subunit;
102-266 8.24e-08

molybdate ABC transporter permease subunit;


Pssm-ID: 181841  Cd Length: 229  Bit Score: 52.23  E-value: 8.24e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 102 SIIAMVIAVPIAVAIALFLthyAPRRLAGP--IAYVIDLLAAVPSIVYGLwgALILVPHMNGLFG-WLNDYFSWTGLFSW 178
Cdd:PRK09421  18 SSVAVLFSLPFGILVAWLL---ARCRFPGKslLDSLLHLPLVLPPVVTGY--LLLISMGRRGFIGqWLYEWFGISFAFSW 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 179 EEGAPRSmltvgillAIMILPVITNVSREVFRQAPQMIEEAALALGATRWEVIRMAVLPFGRSGVISASMLGLGRALGET 258
Cdd:PRK09421  93 RGAALAA--------AVMAFPLMVRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARSLGEF 164


                 ....*...
gi 512057732 259 MAVATVLS 266
Cdd:PRK09421 165 GATITFVS 172
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 113-328 2.25e-07

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 50.38  E-value: 2.25e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  113 AVAIALFLTHYAPRRLAGPIAYVIDLLAAVPSIVyglWGALILVPHMNGLFGWLndyfswtglfsweegaprsMLTVGIL 192
Cdd:pfam00528   1 GIPLGIIAALRRGRRLDRLLRPLIDLLQALPSFV---LAILLVVIAILSILGHG-------------------ILPAIIL 58

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  193 LAIMILPVITNVSREVFRQAPQMIEEAALALGATRWEVIRMAVLPFGRSGVISASMLGLGRALGETMAVATVLSpdflih 272
Cdd:pfam00528  59 ALLGWAGYARLIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGS------ 132

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 512057732  273 asllnpGGGTFAQNIASKFGEADEFGRDALIASGLVLFVITLLVNGAARMIIARRK 328
Cdd:pfam00528 133 ------WPGLGLLLIEAILGYDYPEIQGPVLAAALILLLLNLLVDILQRLLDPRVR 182
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
40-316 3.18e-07

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 51.70  E-value: 3.18e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  40 LSRGSGILLLVIMAAIAVF----LTYRAYLAISEDHTNFLTTFEWNTNIHPASFgiavlaygTVISSIIAMVIAVPIAVA 115
Cdd:COG1178    5 PRRRPRLLLLLLALLLALLvllpLLALLLRAFTDGLANFWALLSDPYLWRALGN--------TLLLALLVTLLSLLLGVP 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 116 IALFLTHYApRRLAGPIAYVIDLLAAVPSIVYGLwgALILVPHMNGLFGWLndyfsWTGLFSWEEGAPRSMLTVGILLAI 195
Cdd:COG1178   77 LAWLLARTD-FPGRRLLRWLLLLPLALPPYVVAL--AWIALFGPNGLLNTL-----LRALFGLEPPDIYGLGGIILVLVL 148

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 196 MILPVITNVSREVFRQAPQMIEEAALALGATRWEVIRMAVLPFGRSGVISASMLGLGRALGEtmaVATVLspdflihasL 275
Cdd:COG1178  149 FNYPYVYLLLRAALRSIDASLEEAARSLGASPWRAFRRVTLPLLRPAIAAGALLVFLLCLAD---FGTPL---------V 216

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 512057732 276 LNPGGGTFAQNIASKFGEADEFGRDALIASGLVLFVITLLV 316
Cdd:COG1178  217 LGGGYTTLTTAIYQAWLGDFDLGAAAALALVLLLLVLLLLL 257
PRK10971 PRK10971
sulfate/thiosulfate ABC transporter permease CysT;
135-261 3.73e-05

sulfate/thiosulfate ABC transporter permease CysT;


Pssm-ID: 182873  Cd Length: 277  Bit Score: 44.74  E-value: 3.73e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 135 VIDLLAAVPSIVYGLWGALILvpHMNGLFG-WLNDyFSWTGLFSWeegaprsmLTVGILLAIMILPVITNVSREVFRQAP 213
Cdd:PRK10971  99 LMDLPFALPTAVAGLTLASLF--SVNGWYGeWLAK-FDIKVTYTW--------LGIAVAMAFTSIPFVVRTVQPVLEELG 167

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 512057732 214 QMIEEAALALGATRWEVIRMAVLPFGRSGVISASMLGLGRALGETMAV 261
Cdd:PRK10971 168 PEYEEAAETLGATRWQSFRKVVLPELSPALLAGVALSFTRSLGEFGAV 215
OpuBB COG1174
ABC-type proline/glycine betaine transport system, permease component [Amino acid transport ...
 102-237 5.78e-04

ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism];


Pssm-ID: 440787 [Multi-domain]  Cd Length: 212  Bit Score: 40.42  E-value: 5.78e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732 102 SIIAMVIAVPIAVAIALFLTHYapRRLAGPIAYVIDLLAAVPSIvyglwgalilvphmnGLFGWLndyFSWTGLfsweeg 181
Cdd:COG1174   27 VLLALLIALLIAVPLGILITRR--RRLAGLVLGVANILQTIPSL---------------ALLALL---IPLLGI------ 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 512057732 182 aprSMLTVGILLAIM-ILPVITNVSrEVFRQAPQMIEEAALALGATRWEVIRMAVLP 237
Cdd:COG1174   81 ---GPAPAIIALVLYaLLPILRNTY-TGLRSVDPAVVEAARGMGMTPWQRLWRVELP 133
TauC COG0600
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion ...
 98-255 1.35e-03

ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440365 [Multi-domain]  Cd Length: 254  Bit Score: 39.75  E-value: 1.35e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 512057732  98 TVISSIIAMVIAVPIAVAIALFlthyapRRLAGPIAYVIDLLAAVPSIVyglWGALILVphmnglfgwlndyfsWTGLfs 177
Cdd:COG0600   70 VLLGFALAALLGVPLGLLLGLS------RLLRRLLDPLLVFLRPIPPLA---LAPLLIL---------------WFGI-- 123

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 512057732 178 weegaprSMLTVGILLAIMILPVITNVSREVFRQAPQMIEEAALALGATRWEVIRMAVLPFGRSGVISASMLGLGRAL 255
Cdd:COG0600  124 -------GEASKIFVIFLGAFFPILLNTAAGVRSVDPELLELARSLGASRWQILRKVVLPAALPYIFTGLRIALGLAW 194
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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