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Conserved domains on  [gi|530477968|gb|EQB57412|]
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DNA-binding protein [Colletotrichum gloeosporioides Cg-14]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3140 pfam11338
Protein of unknown function (DUF3140); Some members in this family of proteins are annotated ...
 10-115 4.99e-38

Protein of unknown function (DUF3140); Some members in this family of proteins are annotated as DNA binding proteins. No function is currently known.


:

Pssm-ID: 431824  Cd Length: 92  Bit Score: 130.44  E-value: 4.99e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530477968   10 EFNEYVNMTAEELESWLKSGDSNSAGWPKDdaegDGETVGHDSGRNIVEILKanpdKKEDEYTDDQVEHMRKVVAYCKRH 89
Cdd:pfam11338   1 EFHELVNMTSKELEDWLETDESGSVGWTKD----GGESVGHESGRRIVEILR----KRKADLTDDDVEHMRKVVGYVKRH 72

                          90       100
                  ....*....|....*....|....*.
gi 530477968   90 LAQEAKGNsekspeEVKKTKSYASLK 115
Cdd:pfam11338  73 LAQEEPSG------DVEDTRWRYSLM 92
Hva1_TUDOR pfam11160
Hypervirulence associated proteins TUDOR domain; Family members include HVA1 ...
 269-327 4.53e-08

Hypervirulence associated proteins TUDOR domain; Family members include HVA1 (hypervirulence-associated protein 1) whose absence is associated with a hypervirulent phenotype in mice. Metabolomics analysis suggests that when HVA1 is absent there is a block in the citric acid cycle, while structural analysis of the Hva1 protein suggests a potential interaction with NADPH. The structural architecture of Hva1 bears similarity with Tudor domains.


:

Pssm-ID: 431691 [Multi-domain]  Cd Length: 59  Bit Score: 49.03  E-value: 4.53e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 530477968  269 VSWQWGNGNPEGKVLDVKEEKTTIEtkngnEVSRDGNPDDPAVVLDTGKS--KAIKANHEL 327
Cdd:pfam11160   4 VSWKWGGGTAEGKVVEVLTEETEAK-----GVTVNASEDDPAYEIESDKTgkDVVHKPSEL 59
 
Name Accession Description Interval E-value
DUF3140 pfam11338
Protein of unknown function (DUF3140); Some members in this family of proteins are annotated ...
 10-115 4.99e-38

Protein of unknown function (DUF3140); Some members in this family of proteins are annotated as DNA binding proteins. No function is currently known.


Pssm-ID: 431824  Cd Length: 92  Bit Score: 130.44  E-value: 4.99e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530477968   10 EFNEYVNMTAEELESWLKSGDSNSAGWPKDdaegDGETVGHDSGRNIVEILKanpdKKEDEYTDDQVEHMRKVVAYCKRH 89
Cdd:pfam11338   1 EFHELVNMTSKELEDWLETDESGSVGWTKD----GGESVGHESGRRIVEILR----KRKADLTDDDVEHMRKVVGYVKRH 72

                          90       100
                  ....*....|....*....|....*.
gi 530477968   90 LAQEAKGNsekspeEVKKTKSYASLK 115
Cdd:pfam11338  73 LAQEEPSG------DVEDTRWRYSLM 92
Hva1_TUDOR pfam11160
Hypervirulence associated proteins TUDOR domain; Family members include HVA1 ...
 269-327 4.53e-08

Hypervirulence associated proteins TUDOR domain; Family members include HVA1 (hypervirulence-associated protein 1) whose absence is associated with a hypervirulent phenotype in mice. Metabolomics analysis suggests that when HVA1 is absent there is a block in the citric acid cycle, while structural analysis of the Hva1 protein suggests a potential interaction with NADPH. The structural architecture of Hva1 bears similarity with Tudor domains.


Pssm-ID: 431691 [Multi-domain]  Cd Length: 59  Bit Score: 49.03  E-value: 4.53e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 530477968  269 VSWQWGNGNPEGKVLDVKEEKTTIEtkngnEVSRDGNPDDPAVVLDTGKS--KAIKANHEL 327
Cdd:pfam11160   4 VSWKWGGGTAEGKVVEVLTEETEAK-----GVTVNASEDDPAYEIESDKTgkDVVHKPSEL 59
 
Name Accession Description Interval E-value
DUF3140 pfam11338
Protein of unknown function (DUF3140); Some members in this family of proteins are annotated ...
 10-115 4.99e-38

Protein of unknown function (DUF3140); Some members in this family of proteins are annotated as DNA binding proteins. No function is currently known.


Pssm-ID: 431824  Cd Length: 92  Bit Score: 130.44  E-value: 4.99e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530477968   10 EFNEYVNMTAEELESWLKSGDSNSAGWPKDdaegDGETVGHDSGRNIVEILKanpdKKEDEYTDDQVEHMRKVVAYCKRH 89
Cdd:pfam11338   1 EFHELVNMTSKELEDWLETDESGSVGWTKD----GGESVGHESGRRIVEILR----KRKADLTDDDVEHMRKVVGYVKRH 72

                          90       100
                  ....*....|....*....|....*.
gi 530477968   90 LAQEAKGNsekspeEVKKTKSYASLK 115
Cdd:pfam11338  73 LAQEEPSG------DVEDTRWRYSLM 92
Hva1_TUDOR pfam11160
Hypervirulence associated proteins TUDOR domain; Family members include HVA1 ...
 269-327 4.53e-08

Hypervirulence associated proteins TUDOR domain; Family members include HVA1 (hypervirulence-associated protein 1) whose absence is associated with a hypervirulent phenotype in mice. Metabolomics analysis suggests that when HVA1 is absent there is a block in the citric acid cycle, while structural analysis of the Hva1 protein suggests a potential interaction with NADPH. The structural architecture of Hva1 bears similarity with Tudor domains.


Pssm-ID: 431691 [Multi-domain]  Cd Length: 59  Bit Score: 49.03  E-value: 4.53e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 530477968  269 VSWQWGNGNPEGKVLDVKEEKTTIEtkngnEVSRDGNPDDPAVVLDTGKS--KAIKANHEL 327
Cdd:pfam11160   4 VSWKWGGGTAEGKVVEVLTEETEAK-----GVTVNASEDDPAYEIESDKTgkDVVHKPSEL 59
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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