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Conserved domains on  [gi|565312970|gb|ETE65422|]
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Neurogenic locus notch protein-like protein, partial [Ophiophagus hannah]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
NOD pfam06816
NOTCH protein; NOTCH signalling plays a fundamental role during a great number of ...
372-427 6.49e-27

NOTCH protein; NOTCH signalling plays a fundamental role during a great number of developmental processes in multicellular animals. NOD and NODP represent a region present in many NOTCH proteins and NOTCH homologs in multiple species such as NOTCH2 and NOTCH3, LIN12, SC1 and TAN1. Role of NOD domain remains to be elucidated.


:

Pssm-ID: 462014  Cd Length: 56  Bit Score: 102.59  E-value: 6.49e-27
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 565312970  372 PERLADGTLVIVVLINPDILRNNSLNFLRELSRVLHTNVVFKRDAKGESMIFPYFG 427
Cdd:pfam06816   1 PEKLAEGVLVIVVLMDPEELLNNSVQFLRELSTVLRTNVRFKKDENGNPMIYPWYG 56
NL smart00004
Domain found in Notch and Lin-12; The Notch protein is essential for the proper ...
339-367 2.92e-13

Domain found in Notch and Lin-12; The Notch protein is essential for the proper differentiation of the Drosophila ectoderm. This protein contains 3 NL domains.


:

Pssm-ID: 197463  Cd Length: 38  Bit Score: 63.88  E-value: 2.92e-13
                           10        20
                   ....*....|....*....|....*....
gi 565312970   339 DQYCKDHFSDGNCDKGCNSAECEWDGLDC 367
Cdd:smart00004  10 DAQCWDKFGDGVCDEECNNAECLWDGGDC 38
 
Name Accession Description Interval E-value
NOD pfam06816
NOTCH protein; NOTCH signalling plays a fundamental role during a great number of ...
372-427 6.49e-27

NOTCH protein; NOTCH signalling plays a fundamental role during a great number of developmental processes in multicellular animals. NOD and NODP represent a region present in many NOTCH proteins and NOTCH homologs in multiple species such as NOTCH2 and NOTCH3, LIN12, SC1 and TAN1. Role of NOD domain remains to be elucidated.


Pssm-ID: 462014  Cd Length: 56  Bit Score: 102.59  E-value: 6.49e-27
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 565312970  372 PERLADGTLVIVVLINPDILRNNSLNFLRELSRVLHTNVVFKRDAKGESMIFPYFG 427
Cdd:pfam06816   1 PEKLAEGVLVIVVLMDPEELLNNSVQFLRELSTVLRTNVRFKKDENGNPMIYPWYG 56
NL smart00004
Domain found in Notch and Lin-12; The Notch protein is essential for the proper ...
339-367 2.92e-13

Domain found in Notch and Lin-12; The Notch protein is essential for the proper differentiation of the Drosophila ectoderm. This protein contains 3 NL domains.


Pssm-ID: 197463  Cd Length: 38  Bit Score: 63.88  E-value: 2.92e-13
                           10        20
                   ....*....|....*....|....*....
gi 565312970   339 DQYCKDHFSDGNCDKGCNSAECEWDGLDC 367
Cdd:smart00004  10 DAQCWDKFGDGVCDEECNNAECLWDGGDC 38
Notch pfam00066
LNR domain; The LNR (Lin-12/Notch repeat) domain is found in three tandem copies in Notch ...
340-367 2.11e-12

LNR domain; The LNR (Lin-12/Notch repeat) domain is found in three tandem copies in Notch related proteins. The structure of the domain has been determined by NMR and was shown to contain three disulphide bonds and coordinate a calcium ion. Three repeats are also found in the PAPP-A peptidase.


Pssm-ID: 459658  Cd Length: 35  Bit Score: 61.39  E-value: 2.11e-12
                          10        20
                  ....*....|....*....|....*...
gi 565312970  340 QYCKDHFSDGNCDKGCNSAECEWDGLDC 367
Cdd:pfam00066   7 PYCWDKFGNGVCDEECNNAECLWDGGDC 34
 
Name Accession Description Interval E-value
NOD pfam06816
NOTCH protein; NOTCH signalling plays a fundamental role during a great number of ...
372-427 6.49e-27

NOTCH protein; NOTCH signalling plays a fundamental role during a great number of developmental processes in multicellular animals. NOD and NODP represent a region present in many NOTCH proteins and NOTCH homologs in multiple species such as NOTCH2 and NOTCH3, LIN12, SC1 and TAN1. Role of NOD domain remains to be elucidated.


Pssm-ID: 462014  Cd Length: 56  Bit Score: 102.59  E-value: 6.49e-27
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 565312970  372 PERLADGTLVIVVLINPDILRNNSLNFLRELSRVLHTNVVFKRDAKGESMIFPYFG 427
Cdd:pfam06816   1 PEKLAEGVLVIVVLMDPEELLNNSVQFLRELSTVLRTNVRFKKDENGNPMIYPWYG 56
NL smart00004
Domain found in Notch and Lin-12; The Notch protein is essential for the proper ...
339-367 2.92e-13

Domain found in Notch and Lin-12; The Notch protein is essential for the proper differentiation of the Drosophila ectoderm. This protein contains 3 NL domains.


Pssm-ID: 197463  Cd Length: 38  Bit Score: 63.88  E-value: 2.92e-13
                           10        20
                   ....*....|....*....|....*....
gi 565312970   339 DQYCKDHFSDGNCDKGCNSAECEWDGLDC 367
Cdd:smart00004  10 DAQCWDKFGDGVCDEECNNAECLWDGGDC 38
Notch pfam00066
LNR domain; The LNR (Lin-12/Notch repeat) domain is found in three tandem copies in Notch ...
340-367 2.11e-12

LNR domain; The LNR (Lin-12/Notch repeat) domain is found in three tandem copies in Notch related proteins. The structure of the domain has been determined by NMR and was shown to contain three disulphide bonds and coordinate a calcium ion. Three repeats are also found in the PAPP-A peptidase.


Pssm-ID: 459658  Cd Length: 35  Bit Score: 61.39  E-value: 2.11e-12
                          10        20
                  ....*....|....*....|....*...
gi 565312970  340 QYCKDHFSDGNCDKGCNSAECEWDGLDC 367
Cdd:pfam00066   7 PYCWDKFGNGVCDEECNNAECLWDGGDC 34
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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