NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1735664789|gb|KAA0188434|]
View 

hypothetical protein FBUS_11682 [Fasciolopsis buski]

Protein Classification

centriolar satellite-associated tubulin polyglutamylase complex regulator 1( domain architecture ID 17786213)

centriolar satellite-associated tubulin polyglutamylase complex regulator 1 (CSTPP1) acts as a regulator of the tubulin polyglutamylase complex (TPGC) that controls cytoskeletal organization, nuclear shape, and cilium disassembly by balancing microtubule and actin assembly

CATH:  1.20.890.10
Gene Ontology:  GO:0046983|GO:0061635|GO:0030674

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DD_C11orf49 cd22959
dimerization/docking (D/D) domain found in UPF0705 protein C11orf49 and similar proteins; ...
 8-63 3.99e-18

dimerization/docking (D/D) domain found in UPF0705 protein C11orf49 and similar proteins; UPF0705 protein C11orf49 is an uncharacterized protein which contains an N-terminal domain that shows high sequence similarity to the dimerization/docking (D/D) domain of regulatory subunit of cAMP-dependent protein kinase (PKA).


:

Pssm-ID: 438528  Cd Length: 53  Bit Score: 71.81  E-value: 3.99e-18
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1735664789   8 EYFARSGVRKYLEDALCGLLTARDKShcvePSTYMLNYFWHVRNGTHTTLREYDYI 63
Cdd:cd22959     2 EYLERHGVLVYLEDAVTQLLENRPEN----PAKFLAEYFRSVLKGTHVLFREYEFI 53
 
Name Accession Description Interval E-value
DD_C11orf49 cd22959
dimerization/docking (D/D) domain found in UPF0705 protein C11orf49 and similar proteins; ...
 8-63 3.99e-18

dimerization/docking (D/D) domain found in UPF0705 protein C11orf49 and similar proteins; UPF0705 protein C11orf49 is an uncharacterized protein which contains an N-terminal domain that shows high sequence similarity to the dimerization/docking (D/D) domain of regulatory subunit of cAMP-dependent protein kinase (PKA).


Pssm-ID: 438528  Cd Length: 53  Bit Score: 71.81  E-value: 3.99e-18
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1735664789   8 EYFARSGVRKYLEDALCGLLTARDKShcvePSTYMLNYFWHVRNGTHTTLREYDYI 63
Cdd:cd22959     2 EYLERHGVLVYLEDAVTQLLENRPEN----PAKFLAEYFRSVLKGTHVLFREYEFI 53
 
Name Accession Description Interval E-value
DD_C11orf49 cd22959
dimerization/docking (D/D) domain found in UPF0705 protein C11orf49 and similar proteins; ...
 8-63 3.99e-18

dimerization/docking (D/D) domain found in UPF0705 protein C11orf49 and similar proteins; UPF0705 protein C11orf49 is an uncharacterized protein which contains an N-terminal domain that shows high sequence similarity to the dimerization/docking (D/D) domain of regulatory subunit of cAMP-dependent protein kinase (PKA).


Pssm-ID: 438528  Cd Length: 53  Bit Score: 71.81  E-value: 3.99e-18
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1735664789   8 EYFARSGVRKYLEDALCGLLTARDKShcvePSTYMLNYFWHVRNGTHTTLREYDYI 63
Cdd:cd22959     2 EYLERHGVLVYLEDAVTQLLENRPEN----PAKFLAEYFRSVLKGTHVLFREYEFI 53
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH