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Conserved domains on  [gi|2425517901|gb|KAJ3615400|]
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hypothetical protein NHX12_016524 [Muraenolepis orangiensis]

Protein Classification

G protein-coupled receptor family protein( domain architecture ID 705710)

G protein-coupled receptor family protein is a seven-transmembrane G protein-coupled receptor (7TM-GPCR) family protein which typically transmits an extracellular signal into the cell by the conformational rearrangement of the 7TM helices and by the subsequent binding and activation of an intracellular heterotrimeric G protein; GPCR ligands include light-sensitive compounds, odors, pheromones, hormones, and neurotransmitters

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tm_GPCRs super family cl28897
seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary ...
19-232 8.41e-10

seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary model represents the seven-transmembrane (7TM) receptors, often referred to as G protein-coupled receptors (GPCRs), which transmit physiological signals from the outside of the cell to the inside via G proteins. GPCRs constitute the largest known superfamily of transmembrane receptors across the three kingdoms of life that respond to a wide variety of extracellular stimuli including peptides, lipids, neurotransmitters, amino acids, hormones, and sensory stimuli such as light, smell and taste. All GPCRs share a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. However, some 7TM receptors, such as the type 1 microbial rhodopsins, do not activate G proteins. Based on sequence similarity, GPCRs can be divided into six major classes: class A (the rhodopsin-like family), class B (the Methuselah-like, adhesion and secretin-like receptor family), class C (the metabotropic glutamate receptor family), class D (the fungal mating pheromone receptors), class E (the cAMP receptor family), and class F (the frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


The actual alignment was detected with superfamily member cd14975:

Pssm-ID: 475119 [Multi-domain]  Cd Length: 278  Bit Score: 57.88  E-value: 8.41e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  19 CLLLGACFMVGLPVNIAVIFDICRNYKSYTSKVnpnilLLVLNLALVDSVALTTSPLVLYTL-FWGFTFGDATCQMMYFI 97
Cdd:cd14975     4 CTLLSLAFAIGLPGNSFVIWSILIKVKQRSVTM-----LLVLNLALADLAVLLTLPVWIYFLaTGTWDFGLAACKGCVYV 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  98 LTSCLFISVVTVTAISINYFLIvklgVANPRLMAQVSRRRREVVFLGGVWALALLFSISTLFTRR-EIDTQDPVChlhra 176
Cdd:cd14975    79 CAVSMYASVFLITLMSLERFLA----VSRPFVSQGWRAKALAHKVLAIIWLLAVLLATPVIAFRHvEETVENGMC----- 149
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2425517901 177 eqapaaykrlkLFRDPAGvGMKSLCLLNSTINPFLYAFA--------LRRKLNRSQASSKNNTG 232
Cdd:cd14975   150 -----------KYRHYSD-GQLVFHLLLETVVGFAVPFTavvlcyscLLRRLRRRRFRRRRRTG 201
 
Name Accession Description Interval E-value
7tmA_LTB4R cd14975
leukotriene B4 receptors, member of the class A family of seven-transmembrane G ...
19-232 8.41e-10

leukotriene B4 receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Leukotriene B4 (LTB4), a metabolite of arachidonic acid, is a powerful chemotactic activator for granulocytes and macrophages. Two receptors for LTB4 have been identified: a high-affinity receptor (LTB4R1 or BLT1) and a low-affinity receptor (TB4R2 or BLT2). Both BLT1 and BLT2 receptors belong to the rhodopsin-like G-protein coupled receptor superfamily and primarily couple to G(i) proteins, which lead to chemotaxis, calcium mobilization, and inhibition of adenylate cyclase. In some cells, they can also couple to the G(q)-like protein, G16, and activate phospholipase C. LTB4 is involved in mediating inflammatory processes, immune responses, and host defense against infection. Studies have shown that LTB4 stimulates leukocyte extravasation, neutrophil degranulation, lysozyme release, and reactive oxygen species generation.


Pssm-ID: 320106 [Multi-domain]  Cd Length: 278  Bit Score: 57.88  E-value: 8.41e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  19 CLLLGACFMVGLPVNIAVIFDICRNYKSYTSKVnpnilLLVLNLALVDSVALTTSPLVLYTL-FWGFTFGDATCQMMYFI 97
Cdd:cd14975     4 CTLLSLAFAIGLPGNSFVIWSILIKVKQRSVTM-----LLVLNLALADLAVLLTLPVWIYFLaTGTWDFGLAACKGCVYV 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  98 LTSCLFISVVTVTAISINYFLIvklgVANPRLMAQVSRRRREVVFLGGVWALALLFSISTLFTRR-EIDTQDPVChlhra 176
Cdd:cd14975    79 CAVSMYASVFLITLMSLERFLA----VSRPFVSQGWRAKALAHKVLAIIWLLAVLLATPVIAFRHvEETVENGMC----- 149
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2425517901 177 eqapaaykrlkLFRDPAGvGMKSLCLLNSTINPFLYAFA--------LRRKLNRSQASSKNNTG 232
Cdd:cd14975   150 -----------KYRHYSD-GQLVFHLLLETVVGFAVPFTavvlcyscLLRRLRRRRFRRRRRTG 201
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
68-174 3.09e-07

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 49.99  E-value: 3.09e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  68 VALTTSPLVLYTLFWG--FTFGDATCQMMYFILTSCLFISVVTVTAISIN-YFLIVKlgvanPRLMAQVSRRRREVVFLG 144
Cdd:pfam00001  33 FSLLTLPFWLVYYLNHgdWPFGSALCKIVGALFVVNGYASILLLTAISIDrYLAIVH-----PLRYKRRRTPRRAKVLIL 107
                          90       100       110
                  ....*....|....*....|....*....|...
gi 2425517901 145 GVWALALLFSISTLF---TRREIDTQDPVCHLH 174
Cdd:pfam00001 108 VIWVLALLLSLPPLLfgwTLTVPEGNVTVCFID 140
 
Name Accession Description Interval E-value
7tmA_LTB4R cd14975
leukotriene B4 receptors, member of the class A family of seven-transmembrane G ...
19-232 8.41e-10

leukotriene B4 receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Leukotriene B4 (LTB4), a metabolite of arachidonic acid, is a powerful chemotactic activator for granulocytes and macrophages. Two receptors for LTB4 have been identified: a high-affinity receptor (LTB4R1 or BLT1) and a low-affinity receptor (TB4R2 or BLT2). Both BLT1 and BLT2 receptors belong to the rhodopsin-like G-protein coupled receptor superfamily and primarily couple to G(i) proteins, which lead to chemotaxis, calcium mobilization, and inhibition of adenylate cyclase. In some cells, they can also couple to the G(q)-like protein, G16, and activate phospholipase C. LTB4 is involved in mediating inflammatory processes, immune responses, and host defense against infection. Studies have shown that LTB4 stimulates leukocyte extravasation, neutrophil degranulation, lysozyme release, and reactive oxygen species generation.


Pssm-ID: 320106 [Multi-domain]  Cd Length: 278  Bit Score: 57.88  E-value: 8.41e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  19 CLLLGACFMVGLPVNIAVIFDICRNYKSYTSKVnpnilLLVLNLALVDSVALTTSPLVLYTL-FWGFTFGDATCQMMYFI 97
Cdd:cd14975     4 CTLLSLAFAIGLPGNSFVIWSILIKVKQRSVTM-----LLVLNLALADLAVLLTLPVWIYFLaTGTWDFGLAACKGCVYV 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  98 LTSCLFISVVTVTAISINYFLIvklgVANPRLMAQVSRRRREVVFLGGVWALALLFSISTLFTRR-EIDTQDPVChlhra 176
Cdd:cd14975    79 CAVSMYASVFLITLMSLERFLA----VSRPFVSQGWRAKALAHKVLAIIWLLAVLLATPVIAFRHvEETVENGMC----- 149
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2425517901 177 eqapaaykrlkLFRDPAGvGMKSLCLLNSTINPFLYAFA--------LRRKLNRSQASSKNNTG 232
Cdd:cd14975   150 -----------KYRHYSD-GQLVFHLLLETVVGFAVPFTavvlcyscLLRRLRRRRFRRRRRTG 201
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
68-171 1.29e-09

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 57.30  E-value: 1.29e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  68 VALTTSPLVLYTLFWG-FTFGDATCQMMYFILTSCLFISVVTVTAISIN-YFLIVKlgvanPRLMAQVSRRRREVVFLGG 145
Cdd:cd00637    47 VGLLVIPFSLVSLLLGrWWFGDALCKLLGFLQSVSLLASILTLTAISVDrYLAIVH-----PLRYRRRFTRRRAKLLIAL 121
                          90       100
                  ....*....|....*....|....*.
gi 2425517901 146 VWALALLFSISTLFTRREIDTQDPVC 171
Cdd:cd00637   122 IWLLSLLLALPPLLGWGVYDYGGYCC 147
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
68-174 3.09e-07

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 49.99  E-value: 3.09e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  68 VALTTSPLVLYTLFWG--FTFGDATCQMMYFILTSCLFISVVTVTAISIN-YFLIVKlgvanPRLMAQVSRRRREVVFLG 144
Cdd:pfam00001  33 FSLLTLPFWLVYYLNHgdWPFGSALCKIVGALFVVNGYASILLLTAISIDrYLAIVH-----PLRYKRRRTPRRAKVLIL 107
                          90       100       110
                  ....*....|....*....|....*....|...
gi 2425517901 145 GVWALALLFSISTLF---TRREIDTQDPVCHLH 174
Cdd:pfam00001 108 VIWVLALLLSLPPLLfgwTLTVPEGNVTVCFID 140
7tmA_NTSR-like cd14979
neurotensin receptors and related G protein-coupled receptors, member of the class A family of ...
74-160 1.52e-06

neurotensin receptors and related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes the neurotensin receptors and related G-protein coupled receptors, including neuromedin U receptors, growth hormone secretagogue receptor, motilin receptor, the putative GPR39 and the capa receptors from insects. These receptors all bind peptide hormones with diverse physiological effects. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320110 [Multi-domain]  Cd Length: 300  Bit Score: 48.12  E-value: 1.52e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  74 PLVLYTLFWG--FTFGDATCQMMYFILTSCLFISVVTVTAISINYFlivkLGVANPRLMAQVSRRRREVVFLGGVWALAL 151
Cdd:cd14979    55 PVELYNFWWQypWAFGDGGCKLYYFLFEACTYATVLTIVALSVERY----VAICHPLKAKTLVTKRRVKRFILAIWLVSI 130

                  ....*....
gi 2425517901 152 LFSISTLFT 160
Cdd:cd14979   131 LCAIPILFL 139
7tmA_GHSR-like cd15928
growth hormone secretagogue receptor, motilin receptor, and related proteins, member of the ...
17-152 2.31e-06

growth hormone secretagogue receptor, motilin receptor, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes growth hormone secretagogue receptor (GHSR or ghrelin receptor), motilin receptor (also called GPR38), and related proteins. Both GHSR and GPR38 bind peptide hormones. Ghrelin, the endogenous ligand for GHSR, is an acylated 28-amino acid peptide hormone produced by ghrelin cells in the gastrointestinal tract. Ghrelin is also called the hunger hormone and is involved in the regulation of growth hormone release, appetite and feeding, gut motility, lipid and glucose metabolism, and energy balance. Motilin, the ligand for GPR38, is a 22 amino acid peptide hormone expressed throughout the gastrointestinal tract and stimulates contraction of gut smooth muscle. It is involved in the regulation of digestive tract motility.


Pssm-ID: 320594 [Multi-domain]  Cd Length: 288  Bit Score: 47.48  E-value: 2.31e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  17 APCLLLgacFMVGLPVNIAVIFDICRNYKSYTSKvnpniLLLVLNLALVDSVALTTSPLVLYTL--FWGFTFGDATCQMM 94
Cdd:cd15928     5 AVCSVL---MLVGASGNLLTVLVIGRSRDMRTTT-----NLYLSSLAVSDLLIFLVLPLDLYRLwrYRPWRFGDLLCRLM 76
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2425517901  95 YFILTSCLFISVVTVTAISINYFlivkLGVANPRLMAQVSRRRREVVFLGGVWALALL 152
Cdd:cd15928    77 YFFSETCTYASILHITALSVERY----LAICHPLRAKVLVTRGRVKLLIAVIWAVAIV 130
7tmA_LTB4R2 cd15122
leukotriene B4 receptor subtype 2 (LTB4R2 or BLT2), member of the class A family of ...
20-183 8.08e-06

leukotriene B4 receptor subtype 2 (LTB4R2 or BLT2), member of the class A family of seven-transmembrane G protein-coupled receptors; Leukotriene B4 (LTB4), a metabolite of arachidonic acid, is a powerful chemotactic activator for granulocytes and macrophages. Two receptors for LTB4 have been identified: a high-affinity receptor (LTB4R1 or BLT1) and a low-affinity receptor (TB4R2 or BLT2). Both BLT1 and BLT2 receptors belong to the rhodopsin-like G-protein coupled receptor superfamily and primarily couple to G(i) proteins, which lead to chemotaxis, calcium mobilization, and inhibition of adenylate cyclase. In some cells, they can also couple to the Gq-like protein, G16, and activate phospholipase C. LTB4 is involved in mediating inflammatory processes, immune responses, and host defense against infection. Studies have shown that LTB4 stimulates leukocyte extravasation, neutrophil degranulation, lysozyme release, and reactive oxygen species generation.


Pssm-ID: 320250 [Multi-domain]  Cd Length: 281  Bit Score: 45.95  E-value: 8.08e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  20 LLLGAcfMVGLPVNIAVIFDICRNYKSYTSKVNpniLLLVLNLALVDSVALTTSPL-VLYTLFWGFTFGDATCQMMYFIL 98
Cdd:cd15122     7 LLLAA--LLGLPGNGFIIWSILWKMKARGRSVT---CILILNLAVADGAVLLLTPFfITFLTRKTWPFGQAVCKAVYYLC 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  99 TSCLFISVVTVTAISINYFlivkLGVANPrLMAQVSRRRREVV-FLGGVWALALLFSISTLFTRREIDTQ---DPVCHLH 174
Cdd:cd15122    82 CLSMYASIFIIGLMSLDRC----LAVTRP-YLAQSLRKKALVRkILLAIWLLALLLALPAFVYRHVWKDEgmnDRICEPC 156

                  ....*....
gi 2425517901 175 RAEQAPAAY 183
Cdd:cd15122   157 HASRGHAIF 165
7tmA_Opsins_type2_animals cd14969
type 2 opsins in animals, member of the class A family of seven-transmembrane G ...
21-159 9.62e-06

type 2 opsins in animals, member of the class A family of seven-transmembrane G protein-coupled receptors; This rhodopsin family represents the type 2 opsins found in vertebrates and invertebrates except sponge. Type 2 opsins primarily function as G protein coupled receptors and are responsible for vision as well as for circadian rhythm and pigment regulation. On the contrary, type 1 opsins such as bacteriorhodopsin and proteorhodopsin are found in both prokaryotic and eukaryotic microbes, functioning as light-gated ion channels, proton pumps, sensory receptors and in other unknown functions. Although these two opsin types share seven-transmembrane domain topology and a conserved lysine reside in the seventh helix, type 1 opsins do not activate G-proteins and are not evolutionarily related to type 2. Type 2 opsins can be classified into six distinct subfamilies including the vertebrate opsins/encephalopsins, the G(o) opsins, the G(s) opsins, the invertebrate G(q) opsins, the photoisomerases, and the neuropsins.


Pssm-ID: 381741 [Multi-domain]  Cd Length: 284  Bit Score: 45.66  E-value: 9.62e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  21 LLGACFMVGLPVNIAVIFDICRNYKSYTSKvNPNILllvlnlalvdSVALT-------TSPLVLYTLFWG-FTFGDATCQ 92
Cdd:cd14969     6 YLSLIGVLGVVLNGLVIIVFLKKKKLRTPL-NLFLL----------NLALAdllmsvvGYPLSFYSNLSGrWSFGDPGCV 74
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2425517901  93 MMYFILTSCLFISVVTVTAISIN-YFLIVKlgvanpRLMAQVSRRRREVVFLGGVWALALLFSISTLF 159
Cdd:cd14969    75 IYGFAVTFLGLVSISTLAALAFErYLVIVR------PLKAFRLSKRRALILIAFIWLYGLFWALPPLF 136
7tmA_GPRnna14-like cd15001
GPRnna14 and related proteins, member of the class A family of seven-transmembrane G ...
23-161 1.17e-05

GPRnna14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the orphan G-protein coupled receptor GPRnna14 found in body louse (Pediculus humanus humanus) as well as its closely related proteins of unknown function. These receptors are members of the class A rhodopsin-like G-protein coupled receptors. As an obligatory parasite of humans, the body louse is an important vector for human diseases, including epidemic typhus, relapsing fever, and trench fever. GPRnna14 shares significant sequence similarity with the members of the neurotensin receptor family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320132 [Multi-domain]  Cd Length: 266  Bit Score: 45.34  E-value: 1.17e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  23 GACFMVGLPVNIAVIFDICRnYKSYTSKVNPNIlllvlnlalvdsVALTTS---------PLVLYTLFW-GFTFGDATCQ 92
Cdd:cd15001     7 VITFVLGLIGNSLVIFVVAR-FRRMRSVTNVFL------------ASLATAdllllvfcvPLKTAEYFSpTWSLGAFLCK 73
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2425517901  93 MMYFILTSCLFISVVTVTAISINYFLIVklgvANP---RLMAQVSRRRREVVflgGVWALALLFSISTLFTR 161
Cdd:cd15001    74 AVAYLQLLSFICSVLTLTAISIERYYVI----LHPmkaKSFCTIGRARKVAL---LIWILSAILASPVLFGQ 138
7tmA_ET_R-like cd14977
endothelin receptors and related proteins, member of the class A family of seven-transmembrane ...
26-188 2.40e-05

endothelin receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily of G-protein coupled receptors includes endothelin receptors, bombesin receptor subtype 3 (BRS-3), gastrin-releasing peptide receptor (GRPR), neuromedin B receptor (NMB-R), endothelin B receptor-like 2 (ETBR-LP-2), and GRP37. The endothelin receptors and related proteins are members of the seven transmembrane rhodopsin-like G-protein coupled receptor family (class A GPCRs) which activate multiple effectors via different types of G protein.


Pssm-ID: 320108 [Multi-domain]  Cd Length: 292  Bit Score: 44.72  E-value: 2.40e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  26 FMVGLPVNIAVIFDICRNyksYTSKVNPNILLLVLNLALVDSVaLTTSPLVLYTLFW-GFTFGDATCQMMYFILTSCLFI 104
Cdd:cd14977    11 FAVGIIGNLMVLCIVCTN---YYMRSVPNILIASLALGDLLLL-LLCVPLNAYNLLTkDWLFGDVMCKLVPFIQVTSLGV 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901 105 SVVTVTAISINYFLIvklgVANPRLMAQVSRRRREVVFLGGVWALALLFSISTLF---TRREIDTQDP---VCHLHRAEQ 178
Cdd:cd14977    87 TVFSLCALSIDRYRA----AVNSMPMQTIGACLSTCVKLAVIWVGSVLLAVPEAVlstVARESSLDNSsltVCIMKPSTP 162
                         170
                  ....*....|
gi 2425517901 179 APAAYKRLKL 188
Cdd:cd14977   163 FAETYPKARS 172
7tmA_Melanopsin cd15336
vertebrate melanopsins (Opsin-4), member of the class A family of seven-transmembrane G ...
20-159 2.56e-05

vertebrate melanopsins (Opsin-4), member of the class A family of seven-transmembrane G protein-coupled receptors; Melanopsin (also called Opsin-4) is the G protein-coupled photopigment that mediates non-visual responses to light. In mammals, these photoresponses include the photo-entrainment of circadian rhythm, pupillary constriction, and acute nocturnal melatonin suppression. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. Melanopsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320458 [Multi-domain]  Cd Length: 290  Bit Score: 44.32  E-value: 2.56e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  20 LLLGACFMVGlpvNIAVIFDICRNYKSYTSkvnPNILLLVLNLALVdSVALTTSPL-VLYTLFWGFTFGDATCQMMYFil 98
Cdd:cd15336     8 LIIGITGMLG---NALVIYAFCRSKKLRTP---ANYFIINLAVSDF-LMSLTQSPIfFVNSLHKRWIFGEKGCELYAF-- 78
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2425517901  99 TSCLF--ISVVTVTAISIN-YFLIVKlgvanPRLMAQVSRRRREVVFLGGVWALALLFSISTLF 159
Cdd:cd15336    79 CGALFgiTSMITLLAISLDrYLVITK-----PLASIRWVSKKRAMIIILLVWLYSLAWSLPPLF 137
7tmA_NTSR1 cd15355
neurotensin receptor subtype 1, member of the class A family of seven-transmembrane G ...
68-164 2.79e-05

neurotensin receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Neurotensin (NTS) is a 13 amino-acid neuropeptide that functions as both a neurotransmitter and a hormone in the nervous system and peripheral tissues, respectively. NTS exerts various biological activities through activation of the G protein-coupled neurotensin receptors, NTSR1 and NTSR2. In the brain, NTS is involved in the modulation of dopamine neurotransmission, opioid-independent analgesia, hypothermia, and the inhibition of food intake, while in the periphery NTS promotes the growth of various normal and cancer cells and acts as a paracrine and endocrine modulator of the digestive tract. The third neurotensin receptor, NTSR3 or also called sortilin, is not a G protein-coupled receptor.


Pssm-ID: 320477 [Multi-domain]  Cd Length: 310  Bit Score: 44.45  E-value: 2.79e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  68 VALTTSPLVLYTLFW---GFTFGDATCQMMYFILTSCLFISVVTVTAISINYFLIVKLGVANPRLMAQvSRRRRevvFLG 144
Cdd:cd15355    52 ILLLAMPVELYNFIWvhhPWAFGDAACRGYYFLRDACTYATALNVASLSVERYLAICHPFKAKSLMSR-SRTKK---FIS 127
                          90       100
                  ....*....|....*....|
gi 2425517901 145 GVWALALLFSISTLFTRREI 164
Cdd:cd15355   128 AIWLASALLAIPMLFTMGEQ 147
7tmA_LTB4R1 cd15121
leukotriene B4 receptor subtype 1 (LTB4R1 or BLT1), member of the class A family of ...
21-161 4.00e-05

leukotriene B4 receptor subtype 1 (LTB4R1 or BLT1), member of the class A family of seven-transmembrane G protein-coupled receptors; Leukotriene B4 (LTB4), a metabolite of arachidonic acid, is a powerful chemotactic activator for granulocytes and macrophages. Two receptors for LTB4 have been identified: a high-affinity receptor (LTB4R1 or BLT1) and a low-affinity receptor (TB4R2 or BLT2). Both BLT1 and BLT2 receptors belong to the rhodopsin-like G-protein coupled receptor superfamily and primarily couple to G(i) proteins, which lead to chemotaxis, calcium mobilization, and inhibition of adenylate cyclase. In some cells, they can also couple to the Gq-like protein, G16, and activate phospholipase C. LTB4 is involved in mediating inflammatory processes, immune responses, and host defense against infection. Studies have shown that LTB4 stimulates leukocyte extravasation, neutrophil degranulation, lysozyme release, and reactive oxygen species generation.


Pssm-ID: 320249 [Multi-domain]  Cd Length: 278  Bit Score: 44.04  E-value: 4.00e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  21 LLGACFMVGLPVNIAVIFDICRNYKSYTSKVnpnilLLVLNLALVDSVALTTSPLVLYTLFWG-FTFGDATCQMMYFILT 99
Cdd:cd15121     6 ILSLAFILGFPGNLFVVWSVLCRMKKRSVTC-----ILVLNLALADAAVLLTAPFFLHFLSGGgWEFGSVVCKLCHYVCG 80
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2425517901 100 SCLFISVVTVTAISINYFLIVKLGVANPRLMAQVSRRRrevvFLGGVWALALLFSISTLFTR 161
Cdd:cd15121    81 VSMYASIFLITLMSMDRCLAVAKPFLSQKMRTKRSVRA----LLLAIWIVAFLLSLPMPFYR 138
7tmA_NPYR-like cd15203
neuropeptide Y receptors and related proteins, member of the class A family of ...
68-155 6.92e-05

neuropeptide Y receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; NPY is a 36-amino acid peptide neurotransmitter with a C-terminal tyrosine amide residue that is widely distributed in the brain and the autonomic nervous system of many mammalian species. NPY exerts its functions through five, G-protein coupled receptor subtypes including NPY1R, NPY2R, NPY4R, NPY5R, and NPY6R; however, NPY6R is not functional in humans. NYP receptors are also activated by its two other family members, peptide YY (PYY) and pancreatic polypeptide (PP). They typically couple to Gi or Go proteins, which leads to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels, and are involved in diverse physiological roles including appetite regulation, circadian rhythm, and anxiety. Also included in this subgroup is prolactin-releasing peptide (PrRP) receptor (previously known as GPR10), which is activated by its endogenous ligand PrRP, a neuropeptide possessing C-terminal Arg-Phe-amide motif. There are two active isoforms of PrRP in mammals: one consists of 20 amino acid residues (PrRP-20) and the other consists of 31 amino acid residues (PrRP-31). PrRP receptor shows significant sequence homology to the NPY receptors, and a micromolar level of NPY can bind and completely inhibit the PrRP-evoked intracellular calcium response in PrRP receptor-expressing cells, suggesting that the PrRP receptor shares a common ancestor with the NPY receptors.


Pssm-ID: 320331 [Multi-domain]  Cd Length: 293  Bit Score: 42.98  E-value: 6.92e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  68 VALTTSPLVLYTLFWGF-TFGDATCQMMYFILTSCLFISVVTVTAISIN-YFLIVKLgvANPRLmaqvsRRRREVVFLGG 145
Cdd:cd15203    49 LCLVSLPFTLIYTLTKNwPFGSILCKLVPSLQGVSIFVSTLTLTAIAIDrYQLIVYP--TRPRM-----SKRHALLIIAL 121
                          90
                  ....*....|
gi 2425517901 146 VWALALLFSI 155
Cdd:cd15203   122 IWILSLLLSL 131
7tmA_Chemokine_R cd14984
classical and atypical chemokine receptors, member of the class A family of ...
72-184 7.27e-05

classical and atypical chemokine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling. Currently, there are ten known receptors for CC chemokines, seven for CXC chemokines, and single receptors for the XC and CX3C chemokines. In addition to these classical chemokine receptors, there exists a subfamily of atypical chemokine receptors (ACKRs) that are unable to couple to G-proteins and, instead, they preferentially mediate beta-arrestin dependent processes, such as receptor internalization, after ligand binding. The classical chemokine receptors contain a conserved DRYLAIV motif in the second intracellular loop, which is required for G-protein coupling. However, the ACKRs lack this conserved motif and fail to couple to G-proteins and induce classical GPCR signaling. Five receptors have been identified for the ACKR family, including CC-chemokine receptors like 1 and 2 (CCRL1 and CCRL2), CXCR7, Duffy antigen receptor for chemokine (DARC), and D6. Both ACKR1 (DARC) and ACKR3 (CXCR7) show low sequence homology to the classic chemokine receptors.


Pssm-ID: 341319 [Multi-domain]  Cd Length: 278  Bit Score: 42.97  E-value: 7.27e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  72 TSPLVLYTLFWGFTFGDATCQMMYFILTSCLFISVVTVTAISIN-YFLIVKlgvANPRLMAQvsRRRREVVFLGGVWALA 150
Cdd:cd14984    52 TLPFWAVYAADGWVFGSFLCKLVSALYTINFYSGILFLACISIDrYLAIVH---AVSALRAR--TLLHGKLTCLGVWALA 126
                          90       100       110
                  ....*....|....*....|....*....|....*
gi 2425517901 151 LLFSIS-TLFTRREIDTQDPVCHLHRAEQAPAAYK 184
Cdd:cd14984   127 LLLSLPeFIFSQVSEENGSSICSYDYPEDTATTWK 161
7tmA_NTSR cd15130
neurotensin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
70-160 1.06e-04

neurotensin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Neurotensin (NTS) is a 13 amino-acid neuropeptide that functions as both a neurotransmitter and a hormone in the nervous system and peripheral tissues, respectively. NTS exerts various biological activities through activation of the G protein-coupled neurotensin receptors, NTSR1 and NTSR2. In the brain, NTS is involved in the modulation of dopamine neurotransmission, opioid-independent analgesia, hypothermia, and the inhibition of food intake, while in the periphery NTS promotes the growth of various normal and cancer cells and acts as a paracrine and endocrine modulator of the digestive tract. The third neurotensin receptor, NTSR3 or also called sortilin, is not a G protein-coupled receptor.


Pssm-ID: 320258 [Multi-domain]  Cd Length: 281  Bit Score: 42.63  E-value: 1.06e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  70 LTTSPLVLYTLFW---GFTFGDATCQMMYFILTSCLFISVVTVTAISINYFlivkLGVANPRLMAQVSRRRREVVFLGGV 146
Cdd:cd15130    54 LLAMPVELYNFIWvhhPWAFGDAGCRGYYFLRDACTYATALNVASLSVERY----LAICHPFKAKTLMSRSRTKKFISAI 129
                          90
                  ....*....|....
gi 2425517901 147 WALALLFSISTLFT 160
Cdd:cd15130   130 WLASALLAIPMLFT 143
7tmA_P2Y1-like cd15168
P2Y purinoceptors 1, 2, 4, 6, 11 and similar proteins, member of the class A family of ...
22-159 1.40e-04

P2Y purinoceptors 1, 2, 4, 6, 11 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; The P2Y receptor family is composed of eight subtypes, which are activated by naturally occurring extracellular nucleotides such as ATP, ADP, UTP, UDP, and UDP-glucose. These eight receptors are ubiquitous in human tissues and can be further classified into two subfamilies based on sequence homology and second messenger coupling: a subfamily of five P2Y1-like receptors (P2Y1, P2Y2, P2Y4, P2Y6, and P2Y11Rs) that are coupled to G(q) protein to activate phospholipase C (PLC) and a second subfamily of three P2Y12-like receptors (P2Y12, P2YR13, and P2Y14Rs) that are coupled to G(i) protein to inhibit adenylate cyclase. Several cloned subtypes, such as P2Y3, P2Y5, and P2Y7-10, are not functional mammalian nucleotide receptors. The native agonists for P2Y receptors are: ATP (P2Y2, P2Y12), ADP (P2Y1, P2Y12, and P2Y13), UTP (P2Y2, P2Y4), UDP (P2Y6, P2Y14), and UDP-glucose (P2Y14). This cluster only includes P2Y1-like receptors as well as other closely related orphan receptors, such as GPR91 (a succinate receptor) and GPR80/GPR99 (an alpha-ketoglutarate receptor).


Pssm-ID: 341329 [Multi-domain]  Cd Length: 284  Bit Score: 42.30  E-value: 1.40e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  22 LGACFMVGLPVNIAVIFDICRNYKSYTSkvnpnILLLVLNLALVDSVALTTSPLVLYTLFWG--FTFGDATCQMMYFILT 99
Cdd:cd15168     7 YGVVFLVGLLLNSVVLYRFIFHLKPWNS-----SAIYMFNLAVSDLLYLLSLPFLIYYYANGdhWIFGDFMCKLVRFLFY 81
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901 100 SCLFISVVTVTAISINYFlivkLGVANPRLMAQVSRRRREVVFLGGVWALALLFSISTLF 159
Cdd:cd15168    82 FNLYGSILFLTCISVHRY----LGICHPLRSLGKLKKRHAVAISVAVWILVLLQLLPILF 137
7tmA_Melanopsin-like cd15083
vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane ...
69-159 1.63e-04

vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represent the Gq-coupled rhodopsin subfamily consists of melanopsins, insect photoreceptors R1-R6, invertebrate Gq opsins as well as their closely related opsins. Melanopsins (also called Opsin-4) are the primary photoreceptor molecules for non-visual functions such as the photo-entrainment of the circadian rhythm and pupillary constriction in mammals. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. The outer photoreceptors (R1-R6) are the insect Drosophila equivalent to the vertebrate rods and are responsible for image formation and motion detection. The invertebrate G(q) opsins includes the arthropod and mollusk visual opsins as well as invertebrate melanopsins, which are also found in vertebrates. Arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. Members of this subfamily belong to the class A of the G protein-coupled receptors and have seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320211 [Multi-domain]  Cd Length: 291  Bit Score: 41.93  E-value: 1.63e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  69 ALTTSPLVLYTLFWG-FTFGDATCQMMYFILTSCLFISVVTVTAISINYFLIVKLGVANPRLMaqvsRRRREVVFLGGVW 147
Cdd:cd15083    50 CILNCPLMVISSFSGrWIFGKTGCDMYGFSGGLFGIMSINTLAAIAVDRYLVITRPMKASVRI----SHRRALIVIAVVW 125
                          90
                  ....*....|..
gi 2425517901 148 ALALLFSISTLF 159
Cdd:cd15083   126 LYSLLWVLPPLF 137
7tmA_C5aR cd15114
complement component 5a anaphylatoxin chemotactic receptors, member of the class A family of ...
86-195 2.63e-04

complement component 5a anaphylatoxin chemotactic receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The anaphylatoxin receptors are a group of G-protein coupled receptors which bind anaphylatoxins; members of this group include C3a receptors and C5a receptors. Anaphylatoxins are also known as complement peptides (C3a, C4a and C5a) that are produced from the activation of the complement system cascade. These complement anaphylatoxins can trigger degranulation of endothelial cells, mast cells, or phagocytes, which induce a local inflammatory response and stimulate smooth muscle cell contraction, histamine release, and increased vascular permeability. They are potent mediators involved in chemotaxis, inflammation, and generation of cytotoxic oxygen-derived free radicals. In humans, a single receptor for C3a (C3AR1) and two receptors for C5a (C5AR1 and C5AR2, also known as C5L2 or GPR77) have been identified, but there is no known receptor for C4a.


Pssm-ID: 320242 [Multi-domain]  Cd Length: 274  Bit Score: 41.24  E-value: 2.63e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  86 FGDATCQMMYFILTSCLFISVVTVTAISINYFLIvklgVANPRLMAQVSRRRREVVFLGGVWALALLFSISTLFTRREID 165
Cdd:cd15114    67 FGAAACKLLPSLILLNMYASVLLLTAISADRCLL----VLRPVWCQNHRRARLAWIACGAAWLLALLLTVPSFIYRRIHQ 142
                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 2425517901 166 TQDP---VC-----HLHRAEQAPAAYKRLKLFRDPAGV 195
Cdd:cd15114   143 EHFPektVCvvdygGSTGVEWAVAIIRFLLGFLGPLVV 180
7tmA_P2Y11 cd15376
P2Y purinoceptor 11, member of the class A family of seven-transmembrane G protein-coupled ...
69-159 2.91e-04

P2Y purinoceptor 11, member of the class A family of seven-transmembrane G protein-coupled receptors; P2Y11 belongs to the P2Y receptor family of purinergic G-protein coupled receptors. The activation of P2Y11 is a major pathway of macrophage activation that leads to the release of cytokines. The P2Y receptor family is composed of eight subtypes, which are activated by naturally occurring extracellular nucleotides such as ATP, ADP, UTP, UDP, and UDP-glucose. These eight receptors are ubiquitous in human tissues and can be further classified into two subfamilies based on sequence homology and second messenger coupling: a subfamily of five P2Y1-like receptors (P2Y1, P2Y2, P2Y4, P2Y6, and P2Y11Rs) that are coupled to G(q) protein to activate phospholipase C (PLC) and a second subfamily of three P2Y12-like receptors (P2Y12, P2YR13, and P2Y14Rs) that are coupled to G(i) protein to inhibit adenylate cyclase. Several cloned subtypes, such as P2Y3, P2Y5, and P2Y7-10, are not functional mammalian nucleotide receptors. The native agonists for P2Y receptors are: ATP (P2Y2, P2Y12), ADP (P2Y1, P2Y12, and P2Y13), UTP (P2Y2, P2Y4), UDP (P2Y6, P2Y14), and UDP-glucose (P2Y14).


Pssm-ID: 320498 [Multi-domain]  Cd Length: 284  Bit Score: 41.22  E-value: 2.91e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  69 ALTTSPLVLYTL---FWgfTFGDATCQMMYFILTSCLFISVVTVTAISINYFlivkLGVANPRLMAQVSRRRREVVFLGG 145
Cdd:cd15376    51 ALSLPLLAAYYYppkNW--RFGEAACKLERFLFTCNLYGSIFFITCISLNRY----LGIVHPFFTRSHVRPKHAKLVSLA 124
                          90
                  ....*....|....
gi 2425517901 146 VWALALLFSISTLF 159
Cdd:cd15376   125 VWLLVAALSAPVLS 138
7tmA_Prostanoid_R cd14981
G protein-coupled receptors for prostanoids, member of the class A family of ...
70-155 3.66e-04

G protein-coupled receptors for prostanoids, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320112 [Multi-domain]  Cd Length: 288  Bit Score: 41.08  E-value: 3.66e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  70 LTTSPLVLYTLFWGFT--FGDATCQ----MMYFILTSCLFIsvvtVTAISINYFLivklGVANPRLMAQVSRRRREVVFL 143
Cdd:cd14981    53 LLTSPVVLAVYASNFEwdGGQPLCDyfgfMMSFFGLSSLLI----VCAMAVERFL----AITHPFFYNSHVKKRRARLML 124
                          90
                  ....*....|..
gi 2425517901 144 GGVWALALLFSI 155
Cdd:cd14981   125 GAVWAFALLIAS 136
7tmA_CXCR1_2 cd15178
CXC chemokine receptor types 1 and 2, member of the class A family of seven-transmembrane G ...
16-172 5.00e-04

CXC chemokine receptor types 1 and 2, member of the class A family of seven-transmembrane G protein-coupled receptors; CXCR1 and CXCR2 are closely related chemotactic receptors for a group of CXC chemokines distinguished by the presence of the amino acid motif ELR immediately adjacent to their CXC motif. Expression of CXCR1 and CXCR2 is strictly controlled in neutrophils by external stimuli such as lipopolysaccharide (LPS), tumor necrosis factor (TNF)-alpha, Toll-like receptor agonists, and nitric oxide. CXCL8 (formerly known as interleukin-8) binds with high-affinity and activates both receptors. CXCR1 also binds CXCL7 (neutrophil-activating protein-2), whereas CXCR2 non-selectively binds to all seven ELR-positive chemokines (CXCL1-7). Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling. Currently, there are ten known receptors for CC chemokines, seven for CXC chemokines, and single receptors for the XC and CX3C chemokines.


Pssm-ID: 341333 [Multi-domain]  Cd Length: 279  Bit Score: 40.34  E-value: 5.00e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  16 VAPCLLLGACFMVGLPVNIAVIFDICRNYKSYTSKvnpniLLLVLNLALVDSVALTTSPLVLYTLFWGFTFGDATCQMMY 95
Cdd:cd15178     1 LALCVIYVLVFLLSLPGNSLVVLVILYNRRSRSST-----DVYLLHLAIADLLFALTLPFWAVSVVKGWIFGTFMCKLVS 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  96 FILTSCLFISVVTVTAISIN-YFLIVklgvanpRLMAQVSRRRREVVFL-GGVWALALLFSISTLFTR---REIDTQDPV 170
Cdd:cd15178    76 LLQEANFYSGILLLACISVDrYLAIV-------HATRALTQKRHLVKFVcAGVWLLSLLLSLPALLNRdafKPPNSGRTV 148

                  ..
gi 2425517901 171 CH 172
Cdd:cd15178   149 CY 150
7tmA_motilin_R cd15132
motilin receptor, member of the class A family of seven-transmembrane G protein-coupled ...
19-159 5.55e-04

motilin receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Motilin receptor, also known as GPR38, is a G-protein coupled receptor that binds the endogenous ligand motilin. Motilin is a 22 amino acid peptide hormone expressed throughout the gastrointestinal tract and stimulates contraction of gut smooth muscle. Motilin is also called as the housekeeper of the gut because it is responsible for the proper filling and emptying of the gastrointestinal tract in response to food intake, and for stimulating the production of pepsin. Motilin receptor shares significant amino acid sequence identity with the growth hormone secretagogue receptor (GHSR) and neurotensin receptors (NTS-R1 and 2).


Pssm-ID: 320260 [Multi-domain]  Cd Length: 289  Bit Score: 40.55  E-value: 5.55e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  19 CLLLgacFMVGLPVNIAVIFDICRnYKSYTSKVNpnilLLVLNLALVDSVALTTSPLVLYTLF----WgfTFGDATCQMM 94
Cdd:cd15132     7 CLIL---FVVGVTGNTMTVLIIRR-YKDMRTTTN----LYLSSMAVSDLLILLCLPFDLYRLWksrpW--IFGEFLCRLY 76
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2425517901  95 YFILTSCLFISVVTVTAISINYFLIVKLGVanpRLMAQVSRRRREVVfLGGVWALALLFSISTLF 159
Cdd:cd15132    77 HYISEGCTYATILHITALSIERYLAICFPL---RAKVLVTRRRVKCV-IAALWAFALLSAGPFLF 137
7tmA_Bombesin_R-like cd15927
bombesin receptor subfamily, member of the class A family of seven-transmembrane G ...
26-155 7.66e-04

bombesin receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; This bombesin subfamily of G-protein coupled receptors consists of neuromedin B receptor (NMBR), gastrin-releasing peptide receptor (GRPR), and bombesin receptor subtype 3 (BRS-3). Bombesin is a tetradecapeptide, originally isolated from frog skin. Mammalian bombesin-related peptides are widely distributed in the gastrointestinal and central nervous systems. The bombesin family receptors couple mainly to the G proteins of G(q/11) family. NMBR functions as the receptor for the neuropeptide neuromedin B, a potent mitogen and growth factor for normal and cancerous lung and for gastrointestinal epithelial tissues. Gastrin-releasing peptide is an endogenous ligand for GRPR and shares high sequence homology with NMB in the C-terminal region. Both NMB and GRP possess bombesin-like biochemical properties. BRS-3 is classified as an orphan receptor and suggested to play a role in sperm cell division and maturation. BRS-3 interacts with known naturally-occurring bombesin-related peptides with low affinity; however, no endogenous high-affinity ligand to the receptor has been identified. The bombesin receptor family belongs to the seven transmembrane rhodopsin-like G-protein coupled receptors (class A GPCRs), which perceive extracellular signals and transduce them to guanine nucleotide-binding (G) proteins.


Pssm-ID: 320593 [Multi-domain]  Cd Length: 294  Bit Score: 39.94  E-value: 7.66e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  26 FMVGLPVNIAVIFDICRNyKSYTSKvnPNILLLvlnlalvdSVA-------LTTSPLV--LYTLFwGFTFGDATCQMMYF 96
Cdd:cd15927    11 FLVGVLGNGTLILIFLRN-KSMRNV--PNIFIL--------SLAlgdllllLTCVPFTstIYTLD-SWPFGEFLCKLSEF 78
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  97 ILTSCLFISVVTVTAISIN-YFLIVklgvaNPRLMAQVSRRRREVVFLGGVWALALLFSI 155
Cdd:cd15927    79 LKDTSIGVSVFTLTALSADrYFAIV-----NPMRKHRSQATRRTLVTAASIWIVSILLAI 133
7tmA_alpha1B_AR cd15326
alpha-1 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G ...
20-168 1.24e-03

alpha-1 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320449 [Multi-domain]  Cd Length: 261  Bit Score: 39.11  E-value: 1.24e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  20 LLLGACFMVGLPVNIAVIFDICRNyKSYTSKVNPNILLLVLNLALVDSVALTTSPLVLYTLFWgfTFGDATCQMMYFILT 99
Cdd:cd15326     5 LVLGAFILFAIVGNILVILSVVCN-RHLRIPTNYFIVNLAIADLLLSFTVLPFSATLEILGYW--VFGRIFCDIWAAVDV 81
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2425517901 100 SCLFISVVTVTAISINYFLIVKLGVANPRLMAqvsrRRREVVFLGGVWALALLFSISTLFTRREIDTQD 168
Cdd:cd15326    82 LCCTASILSLCAISIDRYIGVRHSLQYPTIVT----RKRAILALLGVWVLSTVISIGPLLGWKEPAPPD 146
7tmA_AstA_R_insect cd15096
allatostatin-A receptor in insects, member of the class A family of seven-transmembrane G ...
86-171 1.46e-03

allatostatin-A receptor in insects, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled AstA receptor binds allatostatin A. Three distinct types of allatostatin have been identified in the insects and crustaceans: AstA, AstB, and AstC. They both inhibit the biosynthesis of juvenile hormone and exert an inhibitory influence on food intake. Therefore, allatostatins are considered as potential targets for insect control.


Pssm-ID: 320224 [Multi-domain]  Cd Length: 284  Bit Score: 39.20  E-value: 1.46e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  86 FGDATCQMMYFILTSCLFISVVTVTAISINYFLIVKLGVANPRLMAQvsrrRREVVFLGGVWALALLFSISTLFTRREID 165
Cdd:cd15096    68 FGDVWCKIVQYLVYVTAYASVYTLVLMSLDRYLAVVHPITSMSIRTE----RNTLIAIVGIWIVILVANIPVLFLHGVVS 143

                  ....*.
gi 2425517901 166 TQDPVC 171
Cdd:cd15096   144 YGFSSE 149
7tmA_NTSR2 cd15356
neurotensin receptor subtype 2, member of the class A family of seven-transmembrane G ...
74-159 2.29e-03

neurotensin receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Neurotensin (NTS) is a 13 amino-acid neuropeptide that functions as both a neurotransmitter and a hormone in the nervous system and peripheral tissues, respectively. NTS exerts various biological activities through activation of the G protein-coupled neurotensin receptors, NTSR1 and NTSR2. In the brain, NTS is involved in the modulation of dopamine neurotransmission, opioid-independent analgesia, hypothermia, and the inhibition of food intake, while in the periphery NTS promotes the growth of various normal and cancer cells and acts as a paracrine and endocrine modulator of the digestive tract. The third neurotensin receptor, NTSR3 or also called sortilin, is not a G protein-coupled receptor.


Pssm-ID: 320478 [Multi-domain]  Cd Length: 285  Bit Score: 38.69  E-value: 2.29e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  74 PLVLYTLFW---GFTFGDATCQMMYFILTSCLFISVVTVTAISINYFlivkLGVANPRLMAQVSRRRREVVFLGGVWALA 150
Cdd:cd15356    58 PIELYNFVWfhyPWVFGDLVCRGYYFVRDICSYATVLNIASLSAERY----LAICQPLRAKRLLSKRRTKWLLALIWASS 133

                  ....*....
gi 2425517901 151 LLFSISTLF 159
Cdd:cd15356   134 LGFALPMAF 142
7tmA_GnRHR_vertebrate cd15383
vertebrate gonadotropin-releasing hormone receptors, member of the class A family of ...
14-170 2.40e-03

vertebrate gonadotropin-releasing hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; GnRHR, also known as luteinizing hormone releasing hormone receptor (LHRHR), plays an central role in vertebrate reproductive function; its activation by binding to GnRH leads to the release of follicle stimulating hormone (FSH) and luteinizing hormone (LH) from the pituitary gland. GnRHR is expressed predominantly in the gonadotrope membrane of the anterior pituitary as well as found in numerous extrapituitary tissues including lymphocytes, breast, ovary, prostate, and cancer cell lines. There are at least two types of GnRH receptors, GnRHR1 and GnRHR2, which couple primarily to G proteins of the Gq/11 family. GnRHR is closely related to the adipokinetic hormone receptor (AKH), which binds to a lipid-mobilizing hormone that is involved in control of insect metabolism. They share a common ancestor and are members of the class A of the seven-transmembrane, G-protein coupled receptor (GPCR) superfamily.


Pssm-ID: 320505 [Multi-domain]  Cd Length: 295  Bit Score: 38.50  E-value: 2.40e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  14 VKVAPCLLLgacFMVGLPVNIAVIFDICRNYKSYTSKVNPNILLLVLNLALvdsVALTTSPL-VLYTLFWGFTFGDATCQ 92
Cdd:cd15383     2 VRVAVTFVL---FVLSACSNLAVLWSATRNRRRKLSHVRILILHLAAADLL---VTFVVMPLdAAWNVTVQWYAGDLACR 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  93 MMYFI----LTSCLFISVVtvtaISINYFLIvklgVANPrlMAQVSRRRREVVFLGGVWALALLFSISTLFTRREIDTQD 168
Cdd:cd15383    76 LLMFLklfaMYSSAFVTVV----ISLDRHAA----ILNP--LAIGSARRRNRIMLCAAWGLSALLALPQLFLFHTVTATP 145

                  ..
gi 2425517901 169 PV 170
Cdd:cd15383   146 PV 147
7tmA_P2Y6 cd15379
P2Y purinoceptor 6, member of the class A family of seven-transmembrane G protein-coupled ...
20-147 2.42e-03

P2Y purinoceptor 6, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes mammalian P2Y6, avian P2Y3, and similar proteins. P2Y3 is the avian homolog of mammalian P2Y6. They belong to the G(i) class of a family of purinergic G-protein coupled receptors. The P2Y receptor family is composed of eight subtypes, which are activated by naturally occurring extracellular nucleotides such as ATP, ADP, UTP, UDP, and UDP-glucose. These eight receptors are ubiquitous in human tissues and can be further classified into two subfamilies based on sequence homology and second messenger coupling: a subfamily of five P2Y1-like receptors (P2Y1, P2Y2, P2Y4, P2Y6, and P2Y11Rs) that are coupled to G(q) protein to activate phospholipase C (PLC) and a second subfamily of three P2Y12-like receptors (P2Y12, P2YR13, and P2Y14Rs) that are coupled to G(i) protein to inhibit adenylate cyclase. Several cloned subtypes, such as P2Y3, P2Y5, and P2Y7-10, are not functional mammalian nucleotide receptors. The native agonists for P2Y receptors are: ATP (P2Y2, P2Y12), ADP (P2Y1, P2Y12, and P2Y13), UTP (P2Y2, P2Y4), UDP (P2Y6, P2Y14), and UDP-glucose (P2Y14).


Pssm-ID: 320501 [Multi-domain]  Cd Length: 288  Bit Score: 38.32  E-value: 2.42e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  20 LLLGACFMVGLPVNIAVIFDICRNYKSYTSKvnpniLLLVLNLALVDSVALTTSPLVLYTL----FWgfTFGDATCQMMY 95
Cdd:cd15379     5 LVYSVVFLLGLPLNAVVIGQIWATRQALSRT-----TIYMLNLATADLLYVCSLPLLIYNYtqkdYW--PFGDFTCRLVR 77
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2425517901  96 FILTSCLFISVVTVTAISINYFlivkLGVANPrLMAQVSRRRREVVFL--GGVW 147
Cdd:cd15379    78 FQFYTNLHGSILFLTCISVQRY----LGICHP-LASWHKKKGKKLTWLvcGAVW 126
7tmA_OXGR1 cd15375
2-oxoglutarate receptor 1, member of the class A family of seven-transmembrane G ...
23-167 2.92e-03

2-oxoglutarate receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; 2-oxoglutarate receptor 1 (OXGR1) is also known as GPR80, GPR99, or P2Y15. OXGR1 functions as a receptor for alpha-ketoglutarate, a citric acid cycle intermediate, and acts exclusively through a G(q)-dependent pathway. OXGR1 belongs to the class A GPCR superfamily and is phylogenetically related to the purinergic P2Y1-like receptor subfamily, whose members are coupled to G(q) protein to activate phospholipase C (PLC). OXGR1 has also been reported as a potential third cysteinyl leukotriene receptor with specificity for leukotriene E4.


Pssm-ID: 320497 [Multi-domain]  Cd Length: 280  Bit Score: 38.13  E-value: 2.92e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  23 GACFMVGLPVNIAVIFdicrnykSYTSKVNP--NILLLVLNLALVDSVALTTSPLVLYTLFWG--FTFGDATCQMMYFIL 98
Cdd:cd15375     8 SIIFIVGFPGNIIAIF-------VYLFKMRPwkSSTIIMLNLALTDLLYVTSLPFLIYYYINGesWIFGEFMCKFIRFIF 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2425517901  99 TSCLFISVVTVTAISINYFLIvklgVANPRLMAQVSRRRREVVFLGGVWALAL--LFSISTLFTRREIDTQ 167
Cdd:cd15375    81 HFNLYGSILFLTCFSIFRYVV----IVHPLRAFQVQKRRWAIVACAVVWVISLaeVSPMTFLITTKEKNNR 147
7tmA_NKR_NK3R cd16003
neuromedin-K receptor, member of the class A family of seven-transmembrane G protein-coupled ...
77-173 4.61e-03

neuromedin-K receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The neuromedin-K receptor (NKR), also known as tachykinin receptor 3 (TACR3) or neurokinin B receptor or NK3R, is a G-protein coupled receptor that specifically binds to neurokinin B. The tachykinins (TKs) act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320669 [Multi-domain]  Cd Length: 282  Bit Score: 37.60  E-value: 4.61e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  77 LYTLFWGFTFGDATCQMMYFILTSCLFISVVTVTAISINYFLIVkLGVANPRLMAQVSRrrrevVFLGGVWALALLFSI- 155
Cdd:cd16003    59 IYALHSEWYFGEAYCRFHNFFPITSVFASIYSMTAIAVDRYMAI-IDPLKPRLSATATK-----VVIGSIWILAFLLAFp 132
                          90
                  ....*....|....*...
gi 2425517901 156 STLFTRREIDTQDPVCHL 173
Cdd:cd16003   133 QCLYSKTKVMPGRTLCFV 150
7tmA_Mel1B cd15400
melatonin receptor subtype 1B, member of the class A family of seven-transmembrane G ...
68-159 4.66e-03

melatonin receptor subtype 1B, member of the class A family of seven-transmembrane G protein-coupled receptors; Melatonin (N-acetyl-5-methoxytryptamine) is a naturally occurring sleep-promoting chemical found in vertebrates, invertebrates, bacteria, fungi, and plants. In mammals, melatonin is secreted by the pineal gland and is involved in regulation of circadian rhythms. Its production peaks during the nighttime, and is suppressed by light. Melatonin is shown to be synthesized in other organs and cells of many vertebrates, including the Harderian gland, leukocytes, skin, and the gastrointestinal (GI) tract, which contains several hundred times more melatonin than the pineal gland and is involved in the regulation of GI motility, inflammation, and sensation. Melatonin exerts its pleiotropic physiological effects through specific membrane receptors, named MT1A, MT1B, and MT1C, which belong to the class A rhodopsin-like G-protein coupled receptor family. MT1A and MT1B subtypes are present in mammals, whereas MT1C subtype has been found in amphibians and birds. The melatonin receptors couple to G proteins of the G(i/o) class, leading to the inhibition of adenylate cyclase.


Pssm-ID: 320522 [Multi-domain]  Cd Length: 279  Bit Score: 37.52  E-value: 4.66e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  68 VALTTSPLVLYTLFW-GFTFGDATCQMMYFILTSCLFISVVTVTAISINYFLIVKLGVANPRLMaqvsRRRREVVFLGGV 146
Cdd:cd15400    49 VALYPYPLVLVAIFHnGWALGEMHCKVSGFVMGLSVIGSIFNITGIAINRYCYICHSFAYDKLY----SRWNTLLYVCLI 124
                          90
                  ....*....|...
gi 2425517901 147 WALALLFSISTLF 159
Cdd:cd15400   125 WALTVVAIVPNFF 137
7tmA_GHSR cd15131
growth hormone secretagogue receptor, member of the class A family of seven-transmembrane G ...
13-152 4.69e-03

growth hormone secretagogue receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Growth hormone secretagogue receptor, GHSR, is also known as GH-releasing peptide receptor (GHRP) or Ghrelin receptor. Ghrelin, the endogenous ligand for GHSR, is an acylated 28-amino acid peptide hormone produced by ghrelin cells in the gastrointestinal tract. Ghrelin, also called hunger hormone, is involved in the regulation of growth hormone release, appetite and feeding, gut motility, lipid and glucose metabolism, and energy balance. It also plays a role in the cardiovascular, immune, and reproductive systems. GHSR couples to G-alpha-11 proteins. Both ghrelin and GHSR are expressed in a wide range of cancer tissues. Recent studies suggested that ghrelin may play a role in processes associated with cancer progression, including cell proliferation, metastasis, apoptosis, and angiogenesis.


Pssm-ID: 320259 [Multi-domain]  Cd Length: 291  Bit Score: 37.56  E-value: 4.69e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  13 GVKVApCLLLgacFMVGLPVNIAVIFDICRnYKSYTSKVNpnilLLVLNLALVDSVALTTSPLVLYTLfWGF---TFGDA 89
Cdd:cd15131     2 GITVT-CVLL---FVVGVTGNLMTMLVVSK-YRDMRTTTN----LYLSSMAFSDLLIFLCMPLDLYRL-WQYrpwNFGDL 71
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2425517901  90 TCQMMYFILTSCLFISVVTVTAISINYFLIVKLGVANPRLMAQvsRRRREVVFLggVWALALL 152
Cdd:cd15131    72 LCKLFQFVSESCTYSTILNITALSVERYFAICFPLRAKVVVTK--RRVKLVILV--LWAVSFL 130
7tmA_Opsin_Gq_invertebrates cd15337
invertebrate Gq opsins, member of the class A family of seven-transmembrane G protein-coupled ...
74-159 4.77e-03

invertebrate Gq opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; The invertebrate Gq-coupled opsin subfamily includes the arthropod and mollusc visual opsins. Like the vertebrate visual opsins, arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. The invertebrate Gq opsins are closely related to the vertebrate melanopsins, the primary photoreceptor molecules for non-visual responses to light, and the R1-R6 photoreceptors, which are the fly equivalent to the vertebrate rods. The Gq opsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320459 [Multi-domain]  Cd Length: 292  Bit Score: 37.69  E-value: 4.77e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  74 PLVLYTLFWGF-TFGDATCQMMYFILTSCLFISVVTVTAISINYFLIVklgvANPRLMAQVSRRRREVVFLGGVWALALL 152
Cdd:cd15337    56 PLKTISSFNKKwIWGKVACELYGFAGGIFGFMSITTLAAISIDRYLVI----AKPLEAMKKMTFKRAFIMIIIIWLWSLL 131

                  ....*..
gi 2425517901 153 FSISTLF 159
Cdd:cd15337   132 WSIPPFF 138
7tmA_GPR135 cd15212
G protein-coupled receptor 135, member of the class A family of seven-transmembrane G ...
69-154 5.39e-03

G protein-coupled receptor 135, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR135, also known as the somatostatin- and angiotensin-like peptide receptor (SALPR), is found in various tissues including eye, brain, cervix, stomach, and testis. Pharmacological studies have shown that relaxin-3 (R3) is a high-affinity endogenous ligand for GPR135. R3 has recently been identified as a new member of the insulin/relaxin family of peptide hormones and is exclusively expressed in the brain neurons. In addition to GPR135, R3 also acts as an agonist for GPR142, a pseudogene in the rat, and can activate LGR7 (leucine repeat-containing G-protein receptor-7), which is the main receptor for relaxin-1 (R1) and relaxin-2 (R2). While R1 and R2 are hormones primarily associated with reproduction and pregnancy, R3 is involved in neuroendocrine and sensory processing. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320340 [Multi-domain]  Cd Length: 285  Bit Score: 37.44  E-value: 5.39e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  69 ALTTSPLVLYTLFW--GFTFGDATCQMMYFILTSCLFISVVTVTAISIN-YFLIVKLGVANPRlmaqvsrRRREVVFLGG 145
Cdd:cd15212    50 ALLCLPFAFLTLFSrpGWLFGDRLCLANGFFNACFGIVSTLTMTLISFDrYYAIVRQPQGKIG-------RRRALQLLAA 122

                  ....*....
gi 2425517901 146 VWALALLFS 154
Cdd:cd15212   123 AWLTALGFS 131
7tmA_Mel1 cd15209
melatonin receptor 1, member of the class A family of seven-transmembrane G protein-coupled ...
68-159 5.52e-03

melatonin receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Melatonin (N-acetyl-5-methoxytryptamine) is a naturally occurring sleep-promoting chemical found in vertebrates, invertebrates, bacteria, fungi, and plants. In mammals, melatonin is secreted by the pineal gland and is involved in regulation of circadian rhythms. Its production peaks during the nighttime, and is suppressed by light. Melatonin is shown to be synthesized in other organs and cells of many vertebrates, including the Harderian gland, leukocytes, skin, and the gastrointestinal (GI) tract, which contains several hundred times more melatonin than the pineal gland and is involved in the regulation of GI motility, inflammation, and sensation. Melatonin exerts its pleiotropic physiological effects through specific membrane receptors, named MT1A, MT1B, and MT1C, which belong to the class A rhodopsin-like G-protein coupled receptor family. MT1A and MT1B subtypes are present in mammals, whereas MT1C subtype has been found in amphibians and birds. The melatonin receptors couple to G proteins of the G(i/o) class, leading to the inhibition of adenylate cyclase.


Pssm-ID: 320337 [Multi-domain]  Cd Length: 279  Bit Score: 37.45  E-value: 5.52e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  68 VALTTSPLVLYTLFW-GFTFGDATCQMMYFILTSCLFISVVTVTAISINYFLIVKLGVANPRLMaqvsRRRREVVFLGGV 146
Cdd:cd15209    49 VAIYPYPLILHAIFHnGWTLGQLHCQASGFIMGLSVIGSIFNITAIAINRYCYICHSLQYDRLY----SLRNTCCYLCLT 124
                          90
                  ....*....|...
gi 2425517901 147 WALALLFSISTLF 159
Cdd:cd15209   125 WLLTVLAVLPNFF 137
7tmA_TACR-like cd15202
tachykinin receptors and related receptors, member of the class A family of ...
86-188 5.71e-03

tachykinin receptors and related receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the neurokinin/tachykinin receptors and its closely related receptors such as orphan GPR83 and leucokinin-like peptide receptor. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320330 [Multi-domain]  Cd Length: 288  Bit Score: 37.49  E-value: 5.71e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  86 FGDATCQMMYFILTSCLFISVVTVTAISINYFLIVkLGVANPRLMAqvsrrRREVVFLGGVWALALLFSI-----STLFT 160
Cdd:cd15202    68 FGLFMCHFSNFAQYCSVHVSAYTLTAIAVDRYQAI-MHPLKPRISK-----TKAKFIIAVIWTLALAFALphaicSKLET 141
                          90       100
                  ....*....|....*....|....*....
gi 2425517901 161 RRE-IDTQDPVCHLHRAEQAPAAYKRLKL 188
Cdd:cd15202   142 FKYsEDIVRSLCLEDWPERADLFWKYYDL 170
7tmA_NMU-R2 cd15357
neuromedin U receptor subtype 2, member of the class A family of seven-transmembrane G ...
68-155 6.05e-03

neuromedin U receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuromedin U (NMU) is a highly conserved neuropeptide with a common C-terminal heptapeptide sequence (FLFRPRN-amide) found at the highest levels in the gastrointestinal tract and pituitary gland of mammals. Disruption or replacement of residues in the conserved heptapeptide region can result in the reduced ability of NMU to stimulate smooth-muscle contraction. Two G-protein coupled receptor subtypes, NMU-R1 and NMU-R2, with a distinct expression pattern, have been identified to bind NMU. NMU-R1 is expressed primarily in the peripheral nervous system, while NMU-R2 is mainly found in the central nervous system. Neuromedin S, a 36 amino-acid neuropeptide that shares a conserved C-terminal heptapeptide sequence with NMU, is a highly potent and selective NMU-R2 agonist. Pharmacological studies have shown that both NMU and NMS inhibit food intake and reduce body weight, and that NMU increases energy expenditure.


Pssm-ID: 320479 [Multi-domain]  Cd Length: 293  Bit Score: 37.15  E-value: 6.05e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  68 VALTTSPLVLYTLF--WGFTFGDATCQMMYFILTSCLFISVVTVTAISIN-YFLIVklgvaNPRLMAQVSRRRREVVFLG 144
Cdd:cd15357    49 VLLFGMPLEVYEMWsnYPFLFGPVGCYFKTALFETVCFASILSVTTVSVErYVAIL-----HPFRAKLNSTRERALKIIV 123
                          90
                  ....*....|.
gi 2425517901 145 GVWALALLFSI 155
Cdd:cd15357   124 VLWVLSVLFSI 134
7tmA_PAR cd15162
protease-activated receptors, member of the class A family of seven-transmembrane G ...
86-183 7.66e-03

protease-activated receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes purinergic receptor P2Y8 and protease-activated receptors. P2Y8 (or P2RY8) expression is often increased in leukemia patients, and it plays a role in the pathogenesis of acute leukemia. P2Y8 is phylogenetically closely related to the protease-activated receptors (PARs), which are activated by serine proteases such as thrombin, trypsin, and tryptase. These proteases cleave the extracellular domain of the receptor to form a new N-terminus, which in turn functions as a tethered ligand. The newly-formed tethered ligand binds intramolecularly to activate the receptor and triggers G-protein binding and intracellular signaling. Four different types of the protease-activated receptors have been identified (PAR1-4) and are predominantly expressed in platelets. PAR1, PAR3, and PAR4 are activated by thrombin, whereas PAR2 is activated by trypsin. The PARs are known to couple with several G-proteins including Gi (cAMP inhibitory), G12/13 (Rho and Ras activation), and Gq (calcium signaling) to activate downstream signaling messengers which induces numerous cellular and physiological effects.


Pssm-ID: 341328 [Multi-domain]  Cd Length: 280  Bit Score: 37.04  E-value: 7.66e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2425517901  86 FGDATCQMMYFILTSCLFISVVTVTAISINYFlivkLGVANPRLMAQVSRRRREVVFLGGVWALALLFSISTLFTRREID 165
Cdd:cd15162    68 FGEALCRLVTVAFYGNMYCSILLLTCISIDRY----LAIVHPMGHRRLRARRYALGTCLAIWLLALLVTLPLYLVKQTIF 143
                          90       100
                  ....*....|....*....|.
gi 2425517901 166 TQDP---VCHLHRAEQAPAAY 183
Cdd:cd15162   144 LPALditTCHDVLPEQLLVGD 164
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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