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Conserved domains on  [gi|1001958212|gb|KXS56811|]
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MAG: hypothetical protein AMR96_00510 [Candidatus Adiutrix intracellularis]

Protein Classification

bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase( domain architecture ID 10788351)

bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase regulates transcriptional attenuation of the pyrimidine nucleotide (pyr) operon by binding in a uridine-dependent manner to specific sites on pyr mRNA

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PyrR COG2065
Pyrimidine operon attenuation protein PyrR/uracil phosphoribosyltransferase [Nucleotide ...
 4-176 4.93e-64

Pyrimidine operon attenuation protein PyrR/uracil phosphoribosyltransferase [Nucleotide transport and metabolism]; Pyrimidine operon attenuation protein PyrR/uracil phosphoribosyltransferase is part of the Pathway/BioSystem: Pyrimidine salvage


:

Pssm-ID: 441668  Cd Length: 178  Bit Score: 194.51  E-value: 4.93e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1001958212   4 IIYGRDEIARALVSLADSILA--VQPQEPTFIGIRRGGLVLCDRLIGLIGRKLGRLPARGVIDINLYRDDWTVARELPQV 81
Cdd:COG2065     5 EILDAADIDRALTRIAHEIIErnKGLEDLVLVGIQTRGVPLAERLAERIEEIEGVKVPVGSLDITLYRDDLRRRPPRPVV 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1001958212  82 GRTEIPFSLDGLRVVLVDDVIFTGRTARAALEALVDFGRPSRVELATLVDRGHREMPVHADYVSFKITTTLSQKVNVYFQ 161
Cdd:COG2065    85 NETEIPFDIDGKTVVLVDDVLYTGRTVRAALDALMDFGRPAKIQLAVLVDRGHRELPIRADYVGKNVPTSRSERVEVRLK 164

                         170
                  ....*....|....*
gi 1001958212 162 EQGGrcEDRVVLEEG 176
Cdd:COG2065   165 EIDG--EDAVVIVEP 177
 
Name Accession Description Interval E-value
PyrR COG2065
Pyrimidine operon attenuation protein PyrR/uracil phosphoribosyltransferase [Nucleotide ...
 4-176 4.93e-64

Pyrimidine operon attenuation protein PyrR/uracil phosphoribosyltransferase [Nucleotide transport and metabolism]; Pyrimidine operon attenuation protein PyrR/uracil phosphoribosyltransferase is part of the Pathway/BioSystem: Pyrimidine salvage


Pssm-ID: 441668  Cd Length: 178  Bit Score: 194.51  E-value: 4.93e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1001958212   4 IIYGRDEIARALVSLADSILA--VQPQEPTFIGIRRGGLVLCDRLIGLIGRKLGRLPARGVIDINLYRDDWTVARELPQV 81
Cdd:COG2065     5 EILDAADIDRALTRIAHEIIErnKGLEDLVLVGIQTRGVPLAERLAERIEEIEGVKVPVGSLDITLYRDDLRRRPPRPVV 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1001958212  82 GRTEIPFSLDGLRVVLVDDVIFTGRTARAALEALVDFGRPSRVELATLVDRGHREMPVHADYVSFKITTTLSQKVNVYFQ 161
Cdd:COG2065    85 NETEIPFDIDGKTVVLVDDVLYTGRTVRAALDALMDFGRPAKIQLAVLVDRGHRELPIRADYVGKNVPTSRSERVEVRLK 164

                         170
                  ....*....|....*
gi 1001958212 162 EQGGrcEDRVVLEEG 176
Cdd:COG2065   165 EIDG--EDAVVIVEP 177
PRK05205 PRK05205
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;
9-175 1.58e-60

bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;


Pssm-ID: 235365  Cd Length: 176  Bit Score: 185.72  E-value: 1.58e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1001958212   9 DEIARALVSLADSIL--AVQPQEPTFIGIRRGGLVLCDRLIGLIGRKLGRLPARGVIDINLYRDDWTVARELPQVGRTEI 86
Cdd:PRK05205   10 EALRRALTRIAHEIIerNKGLDNLVLVGIKTRGVWLAERLAERLEQLEGVDVPVGELDITLYRDDLTKKGLHPQVKPTDI 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1001958212  87 PFSLDGLRVVLVDDVIFTGRTARAALEALVDFGRPSRVELATLVDRGHREMPVHADYVSFKITTTLSQKVNVYFQEQGGR 166
Cdd:PRK05205   90 PFDIEGKRVILVDDVLYTGRTIRAALDALFDYGRPARVQLAVLVDRGHRELPIRADYVGKNIPTSRDERVVVRLAEVDGR 169


                  ....*....
gi 1001958212 167 ceDRVVLEE 175
Cdd:PRK05205  170 --DRVVLER 176
Pribosyltran pfam00156
Phosphoribosyl transferase domain; This family includes a range of diverse phosphoribosyl ...
 28-145 4.95e-13

Phosphoribosyl transferase domain; This family includes a range of diverse phosphoribosyl transferase enzymes. This family includes: Adenine phosphoribosyl-transferase EC:2.4.2.7. Hypoxanthine-guanine-xanthine phosphoribosyl-transferase. Hypoxanthine phosphoribosyl-transferase EC:2.4.2.8. Ribose-phosphate pyrophosphokinase i EC:2.7.6.1. Amidophosphoribosyltransferase EC:2.4.2.14. Orotate phosphoribosyl-transferase EC:2.4.2.10. Uracil phosphoribosyl-transferase EC:2.4.2.9. Xanthine-guanine phosphoribosyl-transferase EC:2.4.2.22. In Arabidopsis, At the very N-terminus of this domain is the P-Loop NTPase domain.


Pssm-ID: 425489 [Multi-domain]  Cd Length: 150  Bit Score: 63.15  E-value: 4.95e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1001958212  28 QEPTFIGIRRGGLVLCDRLIGLIGRKLGrlpargVIDINLYRDDWTvarelPQVGRTEIPFSLDGLRVVLVDDVIFTGRT 107
Cdd:pfam00156  29 KPDVVVGILRGGLPFAGILARRLDVPLA------FVRKVSYNPDTS-----EVMKTSSALPDLKGKTVLIVDDILDTGGT 97

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1001958212 108 ARAALEALVDFGrPSRVELATLVDRGHREMPVHADYVS 145
Cdd:pfam00156  98 LLKVLELLKNVG-PKEVKIAVLIDKPAGTEPKDKYDKR 134
PRTases_typeI cd06223
Phosphoribosyl transferase (PRT)-type I domain; Phosphoribosyl transferase (PRT) domain. The ...
 18-135 2.56e-12

Phosphoribosyl transferase (PRT)-type I domain; Phosphoribosyl transferase (PRT) domain. The type I PRTases are identified by a conserved PRPP binding motif which features two adjacent acidic residues surrounded by one or more hydrophobic residue. PRTases catalyze the displacement of the alpha-1'-pyrophosphate of 5-phosphoribosyl-alpha1-pyrophosphate (PRPP) by a nitrogen-containing nucleophile. The reaction products are an alpha-1 substituted ribose-5'-phosphate and a free pyrophosphate (PP). PRPP, an activated form of ribose-5-phosphate, is a key metabolite connecting nucleotide synthesis and salvage pathways. The type I PRTase family includes a range of diverse phosphoribosyl transferase enzymes and regulatory proteins of the nucleotide synthesis and salvage pathways, including adenine phosphoribosyltransferase EC:2.4.2.7., hypoxanthine-guanine-xanthine phosphoribosyltransferase, hypoxanthine phosphoribosyltransferase EC:2.4.2.8., ribose-phosphate pyrophosphokinase EC:2.7.6.1., amidophosphoribosyltransferase EC:2.4.2.14., orotate phosphoribosyltransferase EC:2.4.2.10., uracil phosphoribosyltransferase EC:2.4.2.9., and xanthine-guanine phosphoribosyltransferase EC:2.4.2.22.


Pssm-ID: 206754 [Multi-domain]  Cd Length: 130  Bit Score: 60.87  E-value: 2.56e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1001958212  18 LADSILAVQPQEPTFIGIRRGGLVLCDrligLIGRKLGRlparGVIDINLYRDDWTVARELPQVGRTEIPFSLDGLRVVL 97
Cdd:cd06223     5 LAEEIREDLLEPDVVVGILRGGLPLAA----ALARALGL----PLAFIRKERKGPGRTPSEPYGLELPLGGDVKGKRVLL 76

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1001958212  98 VDDVIFTGRTARAALEALVDFGrPSRVELATLVDRGHR 135
Cdd:cd06223    77 VDDVIATGGTLLAAIELLKEAG-AKVVGVAVLLDKPEG 113
 
Name Accession Description Interval E-value
PyrR COG2065
Pyrimidine operon attenuation protein PyrR/uracil phosphoribosyltransferase [Nucleotide ...
 4-176 4.93e-64

Pyrimidine operon attenuation protein PyrR/uracil phosphoribosyltransferase [Nucleotide transport and metabolism]; Pyrimidine operon attenuation protein PyrR/uracil phosphoribosyltransferase is part of the Pathway/BioSystem: Pyrimidine salvage


Pssm-ID: 441668  Cd Length: 178  Bit Score: 194.51  E-value: 4.93e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1001958212   4 IIYGRDEIARALVSLADSILA--VQPQEPTFIGIRRGGLVLCDRLIGLIGRKLGRLPARGVIDINLYRDDWTVARELPQV 81
Cdd:COG2065     5 EILDAADIDRALTRIAHEIIErnKGLEDLVLVGIQTRGVPLAERLAERIEEIEGVKVPVGSLDITLYRDDLRRRPPRPVV 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1001958212  82 GRTEIPFSLDGLRVVLVDDVIFTGRTARAALEALVDFGRPSRVELATLVDRGHREMPVHADYVSFKITTTLSQKVNVYFQ 161
Cdd:COG2065    85 NETEIPFDIDGKTVVLVDDVLYTGRTVRAALDALMDFGRPAKIQLAVLVDRGHRELPIRADYVGKNVPTSRSERVEVRLK 164

                         170
                  ....*....|....*
gi 1001958212 162 EQGGrcEDRVVLEEG 176
Cdd:COG2065   165 EIDG--EDAVVIVEP 177
PRK05205 PRK05205
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;
9-175 1.58e-60

bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;


Pssm-ID: 235365  Cd Length: 176  Bit Score: 185.72  E-value: 1.58e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1001958212   9 DEIARALVSLADSIL--AVQPQEPTFIGIRRGGLVLCDRLIGLIGRKLGRLPARGVIDINLYRDDWTVARELPQVGRTEI 86
Cdd:PRK05205   10 EALRRALTRIAHEIIerNKGLDNLVLVGIKTRGVWLAERLAERLEQLEGVDVPVGELDITLYRDDLTKKGLHPQVKPTDI 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1001958212  87 PFSLDGLRVVLVDDVIFTGRTARAALEALVDFGRPSRVELATLVDRGHREMPVHADYVSFKITTTLSQKVNVYFQEQGGR 166
Cdd:PRK05205   90 PFDIEGKRVILVDDVLYTGRTIRAALDALFDYGRPARVQLAVLVDRGHRELPIRADYVGKNIPTSRDERVVVRLAEVDGR 169


                  ....*....
gi 1001958212 167 ceDRVVLEE 175
Cdd:PRK05205  170 --DRVVLER 176
Pribosyltran pfam00156
Phosphoribosyl transferase domain; This family includes a range of diverse phosphoribosyl ...
 28-145 4.95e-13

Phosphoribosyl transferase domain; This family includes a range of diverse phosphoribosyl transferase enzymes. This family includes: Adenine phosphoribosyl-transferase EC:2.4.2.7. Hypoxanthine-guanine-xanthine phosphoribosyl-transferase. Hypoxanthine phosphoribosyl-transferase EC:2.4.2.8. Ribose-phosphate pyrophosphokinase i EC:2.7.6.1. Amidophosphoribosyltransferase EC:2.4.2.14. Orotate phosphoribosyl-transferase EC:2.4.2.10. Uracil phosphoribosyl-transferase EC:2.4.2.9. Xanthine-guanine phosphoribosyl-transferase EC:2.4.2.22. In Arabidopsis, At the very N-terminus of this domain is the P-Loop NTPase domain.


Pssm-ID: 425489 [Multi-domain]  Cd Length: 150  Bit Score: 63.15  E-value: 4.95e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1001958212  28 QEPTFIGIRRGGLVLCDRLIGLIGRKLGrlpargVIDINLYRDDWTvarelPQVGRTEIPFSLDGLRVVLVDDVIFTGRT 107
Cdd:pfam00156  29 KPDVVVGILRGGLPFAGILARRLDVPLA------FVRKVSYNPDTS-----EVMKTSSALPDLKGKTVLIVDDILDTGGT 97

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1001958212 108 ARAALEALVDFGrPSRVELATLVDRGHREMPVHADYVS 145
Cdd:pfam00156  98 LLKVLELLKNVG-PKEVKIAVLIDKPAGTEPKDKYDKR 134
PRTases_typeI cd06223
Phosphoribosyl transferase (PRT)-type I domain; Phosphoribosyl transferase (PRT) domain. The ...
 18-135 2.56e-12

Phosphoribosyl transferase (PRT)-type I domain; Phosphoribosyl transferase (PRT) domain. The type I PRTases are identified by a conserved PRPP binding motif which features two adjacent acidic residues surrounded by one or more hydrophobic residue. PRTases catalyze the displacement of the alpha-1'-pyrophosphate of 5-phosphoribosyl-alpha1-pyrophosphate (PRPP) by a nitrogen-containing nucleophile. The reaction products are an alpha-1 substituted ribose-5'-phosphate and a free pyrophosphate (PP). PRPP, an activated form of ribose-5-phosphate, is a key metabolite connecting nucleotide synthesis and salvage pathways. The type I PRTase family includes a range of diverse phosphoribosyl transferase enzymes and regulatory proteins of the nucleotide synthesis and salvage pathways, including adenine phosphoribosyltransferase EC:2.4.2.7., hypoxanthine-guanine-xanthine phosphoribosyltransferase, hypoxanthine phosphoribosyltransferase EC:2.4.2.8., ribose-phosphate pyrophosphokinase EC:2.7.6.1., amidophosphoribosyltransferase EC:2.4.2.14., orotate phosphoribosyltransferase EC:2.4.2.10., uracil phosphoribosyltransferase EC:2.4.2.9., and xanthine-guanine phosphoribosyltransferase EC:2.4.2.22.


Pssm-ID: 206754 [Multi-domain]  Cd Length: 130  Bit Score: 60.87  E-value: 2.56e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1001958212  18 LADSILAVQPQEPTFIGIRRGGLVLCDrligLIGRKLGRlparGVIDINLYRDDWTVARELPQVGRTEIPFSLDGLRVVL 97
Cdd:cd06223     5 LAEEIREDLLEPDVVVGILRGGLPLAA----ALARALGL----PLAFIRKERKGPGRTPSEPYGLELPLGGDVKGKRVLL 76

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1001958212  98 VDDVIFTGRTARAALEALVDFGrPSRVELATLVDRGHR 135
Cdd:cd06223    77 VDDVIATGGTLLAAIELLKEAG-AKVVGVAVLLDKPEG 113
HptA COG0634
Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]; ...
 3-148 1.01e-11

Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]; Hypoxanthine-guanine phosphoribosyltransferase is part of the Pathway/BioSystem: Purine salvage


Pssm-ID: 440399  Cd Length: 176  Bit Score: 60.04  E-value: 1.01e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1001958212   3 EIIYGRDEIARALVSLADSILAV-QPQEPTFIGIRRGGLVLCDRLIgligRKLGrLPAR-GVIDINLYRDDwTVARELPQ 80
Cdd:COG0634     7 EVLISEEEIQARVKELAAQITADyAGKEPLVVGVLKGAFVFMADLL----RALD-FPLEiDFMHVSSYGGG-TESSGEVR 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1001958212  81 VgRTEIPFSLDGLRVVLVDDVIFTGRTARAALEALVDFGrPSRVELATLVDRGH-REMPVHADYVSFKI 148
Cdd:COG0634    81 I-LKDLDEDIEGRDVLIVEDIIDTGLTLSYLLELLKSRG-PASVKIATLLDKPErRKVDVPADYVGFEI 147
Hpt1 COG2236
Hypoxanthine phosphoribosyltransferase [Coenzyme transport and metabolism]; Hypoxanthine ...
 9-150 5.74e-11

Hypoxanthine phosphoribosyltransferase [Coenzyme transport and metabolism]; Hypoxanthine phosphoribosyltransferase is part of the Pathway/BioSystem: Purine salvage


Pssm-ID: 441837 [Multi-domain]  Cd Length: 153  Bit Score: 57.55  E-value: 5.74e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1001958212   9 DEIARALVSLADSILAVQPqEPTFI-GIRRGGLVLcdrlIGLIGRKLGrLPARGVIDINLYRDDwTVARELPQVgRTEIP 87
Cdd:COG2236    12 DEIHELSRRLAEQILESGF-RPDVIvAIARGGLVP----ARILADALG-VPDLASIRVSSYTGT-AKRLEEPVV-KGPLD 83

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1001958212  88 FSLDGLRVVLVDDVIFTGRTARAALEALVDFGrPSRVELATLVDRGHREmpVHADYVSFKITT 150
Cdd:COG2236    84 EDLAGKRVLIVDDVADTGRTLEAVRDLLKEAG-PAEVRTAVLYYKPSSK--FKPDYYAEETDA 143
PRTase_2 pfam15609
Phosphoribosyl transferase; This PRTase family, and C-terminal TRSP domain, are related to ...
 95-145 1.75e-04

Phosphoribosyl transferase; This PRTase family, and C-terminal TRSP domain, are related to OPRTases, and are predicted to use Orotate as substrate. These genes are found in the biosynthetic operon associated with the Ter stress-response operon and are predicted to be involved in the biosynthesis of a ribo-nucleoside involved in stress response.


Pssm-ID: 434809  Cd Length: 189  Bit Score: 40.23  E-value: 1.75e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1001958212  95 VVLVDDVIFTGRTARAALEALVDFGRPSRVELATLVD-RG----------HREMPVHADYVS 145
Cdd:pfam15609 123 LVLVDDEISTGNTALNLIRALHAKLPRKRYVVVSLVDwRSpedraafaalAAELGIPIDVVS 184
PyrE COG0461
Orotate phosphoribosyltransferase [Nucleotide transport and metabolism]; Orotate ...
 90-133 6.50e-04

Orotate phosphoribosyltransferase [Nucleotide transport and metabolism]; Orotate phosphoribosyltransferase is part of the Pathway/BioSystem: Pyrimidine biosynthesis


Pssm-ID: 440229  Cd Length: 201  Bit Score: 38.60  E-value: 6.50e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 1001958212  90 LDGLRVVLVDDVIFTGRTARAALEALVDFG-RPSRVelATLVDRG 133
Cdd:COG0461   110 LPGERVLVVEDVITTGGSVLEAVEALREAGaEVVGV--AVIVDRE 152
pyrE PRK00455
orotate phosphoribosyltransferase; Validated
 90-133 6.77e-04

orotate phosphoribosyltransferase; Validated


Pssm-ID: 234771  Cd Length: 202  Bit Score: 38.60  E-value: 6.77e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 1001958212  90 LDGLRVVLVDDVIFTGRTARAALEALVDFG-RPSRVelATLVDRG 133
Cdd:PRK00455  111 LFGKRVLVVEDVITTGGSVLEAVEAIRAAGaEVVGV--AVIVDRQ 153
ComFC COG1040
DNA utilization protein ComFC/GntX, contains phosphoribosyltransferase domain [General ...
 87-129 9.72e-04

DNA utilization protein ComFC/GntX, contains phosphoribosyltransferase domain [General function prediction only];


Pssm-ID: 440662 [Multi-domain]  Cd Length: 196  Bit Score: 38.26  E-value: 9.72e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 1001958212  87 PFSLDGLRVVLVDDVIFTGRTARAALEALVDFGrPSRVELATL 129
Cdd:COG1040   150 PARLAGKHVLLVDDVLTTGATLAEAARALKAAG-AARVDVLVL 191
COG1926 COG1926
Predicted phosphoribosyltransferase [General function prediction only];
87-128 2.03e-03

Predicted phosphoribosyltransferase [General function prediction only];


Pssm-ID: 441529  Cd Length: 209  Bit Score: 37.36  E-value: 2.03e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1001958212  87 PFSLDGLRVVLVDDVIFTGRTARAALEALVDFGrPSRVELAT 128
Cdd:COG1926   116 PPDLKGRTVILVDDGIATGATMRAALRALRRQG-PARIVVAV 156
PRK02304 PRK02304
adenine phosphoribosyltransferase; Provisional
 92-115 4.18e-03

adenine phosphoribosyltransferase; Provisional


Pssm-ID: 235028  Cd Length: 175  Bit Score: 36.21  E-value: 4.18e-03
                          10        20
                  ....*....|....*....|....
gi 1001958212  92 GLRVVLVDDVIFTGRTARAALEAL 115
Cdd:PRK02304  114 GDRVLIVDDLLATGGTLEAAIKLL 137
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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